cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AA833709 | .a | 2816 to 3276 | 463 to 3 | 461/463 (99 %) | 0 diff (100 %id) | ||||
AA095641 | .a | 2159 to 2412 | 48 to 301 | 254/301 (84 %) | 9 diff (97.1 %id) | ||||
AA368232 | placenta | .a | 3648 to 3854 | 1 to 207 | 207/208 (99 %) | 3 diff (98.6 %id) | |||
AA372650 | colon | .e | 361 to 640 | 1 to 280 | tiling clone, | 280/309 (90 %) | 1 diff (99.7 %id) | ||
AK299336 | .b | 1 to 2000 | 5 to 2005 | exact | tiling clone, | 2005/2005 (100 %) | 1 diff (100.0 %id) | ||
AW798861 | uterus | .a | 3747 to 4173 | 11 to 435 | 425/435 (97 %) | 6 diff (98.7 %id) | |||
AW993901 | breast_normal | .a | 3656 to 4278 | 2 to 622 | 621/623 (99 %) | 6 diff (99.1 %id) | |||
BC037298 | testis | .a | 1 to 3572 | 1 to 3573 | S379R K463R H772R | tiling clone, available from MGC, AAA | 3573/3575 (99 %) | 11 diff (99.7 %id) | |
BC066980 | testis | .d | 6 to 1926 | 1 to 1922 | F278L | tiling clone, available from MGC, AAA | 1922/1923 (99 %) | 3 diff (99.9 %id) | |
BE152562 | head_neck | .a | 1486 to 1813 | 1 to 334 | 334/334 (100 %) | 28 diff (91.7 %id) | |||
BE163064. matches multiple genes | head_neck | .n-u | 1 to 196 | 3 to 196 | E2A H3D Q4T L5T E12R ... | tiling clone, | also hits gene sustoybu | 194/200 (97 %) | 14 diff (93.0 %id) |
BE719392 | head_neck | .a | 2126 to 2566 | 1 to 438 | 438/438 (100 %) | 9 diff (98.0 %id) | |||
BE814115 | breast_normal | .a | 4533 to 4888 | 1 to 354 | 354/354 (100 %) | 5 diff (98.6 %id) | |||
BF170423 | blood | .a | 2183 to 2750 | 1 to 566 | 566/570 (99 %) | 15 diff (97.4 %id) | |||
BG010857 | placenta_normal | .a | 695 to 1004 | 310 to 1 | 310/310 (100 %) | 5 diff (98.4 %id) | |||
BI037154. matches multiple genes | nervous_tumor | .m-u | 1 to 420 | 30 to 451 | G8S V20M C42R E46K | tiling clone, | also hits gene manime | 422/451 (93 %) | 6 diff (98.7 %id) |
BQ375821 | testis_normal | .a | 1718 to 1944 | 1 to 227 | 227/227 (100 %) | 7 diff (97.0 %id) | |||
DA054254 | cerebellum | .b | 41 to 588 | 2 to 550 | capped | 549/549 (100 %) | 1 diff (99.9 %id) | ||
CN294224 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .e | 1099 to 1741 | 1 to 643 | tiling clone, | 643/643 (100 %) | 0 diff (100 %id) | ||
CR602378 | Neuroblastoma Cot 10-normalized | .a | 2445 to 3578 | 1 to 1134 | tiling clone, | 1134/1134 (100 %) | 0 diff (100 %id) | ||
AL521472 | brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized | .a | 2617 to 3560 | 946 to 1 | 946/946 (100 %) | 10 diff (99.0 %id) | |||
AL521473 | brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized | .a | 2443 to 3330 | 1 to 888 | 888/888 (100 %) | 3 diff (99.7 %id) | |||
BX368978 | Neuroblastoma Cot 10-normalized | .a | 3170 to 3578 | 13 to 427 | 415/427 (97 %) | 6 diff (98.6 %id) | |||
BX390643 | .a | 1125 to 2019 | 1 to 894 | tiling clone, | 894/897 (99 %) | 14 diff (98.5 %id) | |||
BX400201 | .b | 94 to 1126 | 1 to 1022 | 1022/1022 (100 %) | 22 diff (97.9 %id) | ||||
D44804 | brain | .a | 3727 to 3919 | 1 to 193 | 193/193 (100 %) | 0 diff (100 %id) | |||
AL138110 | brain | .a | 1801 to 2243 | 1 to 443 | 443/443 (100 %) | 0 diff (100 %id) | |||
AL698347 | human skeletal muscle | .l-u | 1 to 460 | 1 to 460 | exact | tiling clone, | 460/460 (100 %) | 1 diff (99.8 %id) | |
AL705882 | human skeletal muscle | .e | 761 to 1513 | 1 to 750 | tiling clone, | 750/750 (100 %) | 6 diff (99.2 %id) | ||
DN914431 | .a | 2442 to 3058 | 1 to 616 | 616/616 (100 %) | 2 diff (99.7 %id) | ||||
DN914432 | .a | 2996 to 3574 | 579 to 2 | 578/579 (99 %) | 0 diff (100 %id) | ||||
EC478248 | Prostate | .a | 4409 to 4500 | 1 to 92 | 92/92 (100 %) | 0 diff (100 %id) | |||
EC482628 | Prostate | .a | 2405 to 2494 | 93 to 2 | 92/99 (92 %) | 0 diff (100 %id) | |||
EC532188 | Prostate | .a | 4154 to 4254 | 1 to 101 | 101/101 (100 %) | 3 diff (97.1 %id) | |||
DC352036. matches multiple genes | brain | .g | 1 to 583 | 1 to 584 | F4Y Q121R | tiling clone, | also hits gene LOC202181 | 584/584 (100 %) | 4 diff (99.4 %id) |
FN139185 | breast carcinoma | .a | 2831 to 2917 | 1 to 86 | 86/89 (96 %) | 5 diff (94.4 %id) | |||
BP397310 | pancreatic islet | .a | 3654 to 4236 | 583 to 1 | 583/583 (100 %) | 1 diff (99.9 %id) | |||
DB443741 | testis | .j | 135 to 580 | 1 to 439 | tiling clone, | 439/439 (100 %) | 10 diff (97.8 %id) | ||
DB520509 | testis | .a | 3118 to 3574 | 1 to 457 | Submitted on the opposite strand | 457/458 (99 %) | 1 diff (99.8 %id) | ||
DB526316 | testis | .d | 1505 to 1934 | 1 to 431 | tiling clone, | Submitted on the opposite strand | 431/431 (100 %) | 2 diff (99.6 %id) | |
DB533818. matches multiple genes | hippocampus | .a | 3654 to 4068 | 414 to 1 | also hits gene KIAA1191 | 414/414 (100 %) | 14 diff (96.7 %id) | ||
DB534344. matches multiple genes | hippocampus | .a | 3658 to 4000 | 369 to 27 | also hits gene KIAA1191 | 343/371 (92 %) | 0 diff (100 %id) | ||
DB537331. matches multiple genes | hippocampus | .a | 3651 to 4069 | 417 to 1 | also hits gene KIAA1191 | 417/418 (99 %) | 7 diff (98.4 %id) | ||
DB537414. matches multiple genes | hippocampus | .a | 3654 to 4074 | 425 to 1 | also hits gene KIAA1191 | 425/425 (100 %) | 16 diff (96.3 %id) | ||
DB537684. matches multiple genes | hippocampus | .a | 3654 to 4094 | 440 to 1 | also hits gene KIAA1191 | 440/441 (99 %) | 9 diff (98.0 %id) | ||
DB539478. matches multiple genes | hippocampus | .a | 3654 to 4089 | 438 to 3 | also hits gene KIAA1191 | 436/438 (99 %) | 0 diff (100 %id) | ||
DB542726. matches multiple genes | hippocampus | .a | 3656 to 4108 | 453 to 1 | also hits gene KIAA1191 | 453/455 (99 %) | 0 diff (100 %id) | ||
DB543797. matches multiple genes | hippocampus | .a | 3658 to 4107 | 450 to 1 | also hits gene KIAA1191 | 450/452 (99 %) | 0 diff (100 %id) | ||
DB545650. matches multiple genes | hippocampus | .a | 3656 to 4151 | 496 to 1 | tiling clone, | also hits gene KIAA1191 | 496/498 (99 %) | 0 diff (100 %id) | |
DB546577. matches multiple genes | hippocampus | .a | 3654 to 4077 | 424 to 1 | also hits gene KIAA1191 | 424/424 (100 %) | 1 diff (99.8 %id) | ||
DB547920. matches multiple genes | hippocampus | .a | 3656 to 4092 | 437 to 1 | also hits gene KIAA1191 | 437/439 (99 %) | 0 diff (100 %id) | ||
DB548701. matches multiple genes | hippocampus | .a | 3656 to 4109 | 454 to 1 | also hits gene KIAA1191 | 454/456 (99 %) | 3 diff (99.4 %id) | ||
DB548840. matches multiple genes | hippocampus | .a | 3656 to 4099 | 440 to 1 | also hits gene KIAA1191 | 440/442 (99 %) | 4 diff (99.1 %id) | ||
DB550239. matches multiple genes | hippocampus | .a | 3656 to 4138 | 483 to 1 | also hits gene KIAA1191 | 483/483 (100 %) | 1 diff (99.8 %id) | ||
DB551161. matches multiple genes | hippocampus | .a | 3656 to 4126 | 471 to 1 | also hits gene KIAA1191 | 471/473 (99 %) | 0 diff (100 %id) | ||
DB553672. matches multiple genes | hypothalamus | .a | 3654 to 4086 | 447 to 1 | also hits gene KIAA1191 | 447/447 (100 %) | 28 diff (93.8 %id) | ||
DB555083 | hypothalamus | .a | 3654 to 4092 | 439 to 1 | 439/439 (100 %) | 1 diff (99.8 %id) | |||
DB556540. matches multiple genes | hypothalamus | .a | 3654 to 4078 | 425 to 1 | also hits gene KIAA1191 | 425/425 (100 %) | 0 diff (100 %id) | ||
DB557439. matches multiple genes | hypothalamus | .a | 3654 to 4086 | 433 to 1 | also hits gene KIAA1191 | 433/433 (100 %) | 5 diff (98.9 %id) | ||
DB574003. matches multiple genes | hypothalamus | .a | 3656 to 4119 | 464 to 1 | also hits gene KIAA1191 | 464/466 (99 %) | 1 diff (99.8 %id) | ||
DB577939. matches multiple genes | hypothalamus | .a | 3654 to 4128 | 475 to 1 | also hits gene KIAA1191 | 475/475 (100 %) | 2 diff (99.6 %id) | ||
R14098 | whole brain | .a | 2328 to 2561 | 1 to 240 | 240/336 (71 %) | 5 diff (98.6 %id) | |||
R13117 | whole brain | .a | 2095 to 2482 | 1 to 404 | 404/407 (99 %) | 9 diff (97.8 %id) | |||
R40595 | whole brain | .a | 3330 to 3578 | 256 to 6 | 251/256 (98 %) | 0 diff (100 %id) | |||
T92489. matches multiple genes | lung | .a | 3671 to 3879 | 1 to 211 | also hits gene kleygoy | 211/213 (99 %) | 9 diff (95.8 %id) | ||
H56017 | liver and spleen | .e | 628 to 1087 | 465 to 6 | tiling clone, | 460/465 (98 %) | 0 diff (100 %id) | ||
H56099 | liver and spleen | .e | 51 to 432 | 1 to 390 | tiling clone, | 390/406 (96 %) | 13 diff (96.8 %id) | ||
AA128981 | .a | 1452 to 1823 | 1 to 376 | 376/376 (100 %) | 4 diff (99.0 %id) | ||||
AA128982 | .a | 3152 to 3575 | 425 to 1 | 425/425 (100 %) | 2 diff (99.6 %id) | ||||
AA182756 | .a | 3652 to 4011 | 1 to 360 | 360/360 (100 %) | 2 diff (99.5 %id) | ||||
AA293700 | ovarian tumor, ovary | .a | 2212 to 2537 | 1 to 326 | 326/326 (100 %) | 0 diff (100 %id) | |||
AA293701 | ovarian tumor, ovary | .a | 3290 to 3728 | 439 to 1 | tiling clone, | 439/439 (100 %) | 1 diff (99.8 %id) | ||
AA292933 | ovarian tumor, ovary | .a | 3304 to 3728 | 425 to 1 | 425/425 (100 %) | 1 diff (99.8 %id) | |||
AA292944 | ovarian tumor, ovary | .a | 2212 to 2642 | 1 to 430 | 430/430 (100 %) | 2 diff (99.6 %id) | |||
AA804603 | colon | .i-u | 185 to 595 | 411 to 1 | exact | tiling clone, | 411/411 (100 %) | 0 diff (100 %id) | |
AA746604 | pooled germ cell tumors | .i-u | 118 to 594 | 477 to 1 | exact | 477/477 (100 %) | 2 diff (99.6 %id) | ||
AA743300 | germinal center B cell | .a | 3123 to 3574 | 466 to 18 | AAA | 449/449 (100 %) | 9 diff (98.0 %id) | ||
AI024604 | .a | 3179 to 3574 | 406 to 11 | AAA | 396/396 (100 %) | 2 diff (99.5 %id) | |||
AI149641 | .a | 3145 to 3577 | 433 to 1 | 433/433 (100 %) | 0 diff (100 %id) | ||||
AI207067 | lung | .a | 2805 to 3200 | 397 to 2 | 396/397 (99 %) | 0 diff (100 %id) | |||
AI298631 | carcinoid, lung | .a | 4182 to 4612 | 431 to 1 | 431/431 (100 %) | 1 diff (99.8 %id) | |||
AI346313 | adenocarcinoma, colon | .a | 3179 to 3579 | 401 to 1 | 401/401 (100 %) | 2 diff (99.6 %id) | |||
AI342422 | lung | .a | 2770 to 3200 | 432 to 2 | 431/442 (97 %) | 0 diff (100 %id) | |||
AI470661 | poorly differentiated adenocarcinoma withsignet ring cell features, stomach | .a | 3303 to 3542 | 240 to 1 | 240/240 (100 %) | 0 diff (100 %id) | |||
AI824305 | carcinoid, lung | .a | 3687 to 4089 | 403 to 1 | 403/403 (100 %) | 0 diff (100 %id) | |||
AI871879 | ovary, tumor, 5 pooled (see description) | .a | 3175 to 3574 | 400 to 1 | 400/400 (100 %) | 0 diff (100 %id) | |||
AI962865 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .a | 3144 to 3573 | 433 to 3 | 431/433 (99 %) | 0 diff (100 %id) | |||
AW005730 | poorly differentiated adenocarcinoma withsignet ring cell features, stomach | .a | 2926 to 3276 | 353 to 4 | 350/353 (99 %) | 0 diff (100 %id) | |||
AW131011 | poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus | .a | 4354 to 4472 | 119 to 1 | 119/119 (100 %) | 1 diff (99.2 %id) | |||
AW303434 | pooled | .a | 2911 to 3331 | 428 to 7 | 422/428 (98 %) | 0 diff (100 %id) | |||
AW408573 | lymph | .a | 2430 to 2804 | 1 to 375 | 375/375 (100 %) | 4 diff (99.0 %id) | |||
BE348413 | carcinoid, lung | .a | 4051 to 4611 | 561 to 1 | 561/561 (100 %) | 0 diff (100 %id) | |||
BE551310 | carcinoid, lung | .a | 3874 to 4089 | 216 to 1 | 216/216 (100 %) | 3 diff (98.7 %id) | |||
BE258934 | eye, retinoblastoma | .a | 2114 to 2969 | 60 to 913 | 854/976 (87 %) | 37 diff (96.3 %id) | |||
BF116060 | fibrotheoma, ovary | .a | 3044 to 3578 | 536 to 2 | 535/536 (99 %) | 0 diff (100 %id) | |||
BF222872 | pooled germ cell tumors | .i-u | 1 to 594 | 594 to 1 | exact | tiling clone, | 594/594 (100 %) | 1 diff (99.9 %id) | |
BF668809 | brain, primitive neuroectoderm | .e | 1 to 600 | 1 to 597 | tiling clone, | 597/872 (68 %) | 21 diff (97.6 %id) | ||
BG112102 | Bone, osteosarcoma, cell line | .d | 1634 to 1926 | 1 to 293 | AAA | 293/293 (100 %) | 0 diff (100 %id) | ||
BC037411 | Testis, embryonal carcinoma | .c | 94 to 2056 | 348 to 2310 | exact | tiling clone, AAA | 1963/2310 (84 %) | 11 diff (99.6 %id) | |
BG697778 | skin | .a | 2030 to 2839 | 1 to 808 | 808/847 (95 %) | 7 diff (99.2 %id) | |||
BG717441. matches multiple genes | testis | .d | 1 to 510 | 1 to 521 | tiling clone, | also hits gene LOC202181 | 521/666 (78 %) | 19 diff (97.2 %id) | |
BI825730 | brain, medulla | .e | 1628 to 2333 | 1 to 734 | 654/814 (80 %) | 27 diff (96.7 %id) | |||
BI831728 | brain, medulla | .a | 2290 to 3084 | 1 to 796 | 796/796 (100 %) | 4 diff (99.5 %id) | |||
BC073880 | Brain, adult medulla | .e | 1693 to 3514 | 1 to 1822 | exact | tiling clone, available from MGC, AAA | 1822/1822 (100 %) | 0 diff (100 %id) | |
BI829774 | brain, medulla | .e | 1693 to 2553 | 1 to 862 | available from MGC, | 862/863 (99 %) | 7 diff (99.2 %id) | ||
BC032390 | Brain, adult medulla | .e | 1725 to 3514 | 1 to 1790 | exact | available from MGC, AAA | 1790/1790 (100 %) | 0 diff (100 %id) | |
BI830084 | brain, medulla | .e | 1725 to 2578 | 1 to 850 | available from MGC, | 850/853 (99 %) | 10 diff (98.9 %id) | ||
BI831073 | brain, medulla | .f | 1 to 847 | 1 to 845 | P251H Q252R A253L L254A P255V ... | tiling clone, | 845/846 (99 %) | 7 diff (99.2 %id) | |
BI463741 | testis | .j | 1 to 392 | 1 to 396 | tiling clone, | 396/833 (47 %) | 10 diff (98.8 %id) | ||
BM052805 | Islets of Langerhans, Pancreas | .a | 3100 to 3574 | 492 to 18 | AAA | 475/475 (100 %) | 2 diff (99.6 %id) | ||
BM053114 | Islets of Langerhans, Pancreas | .a | 977 to 1559 | 1 to 582 | 582/582 (100 %) | 1 diff (99.9 %id) | |||
BM908219 | brain, medulla | .e | 1714 to 2620 | 14 to 927 | 912/1087 (83 %) | 23 diff (97.9 %id) | |||
BQ222435 | epithelioid carcinoma, Pancreas | .a | 3651 to 4388 | 38 to 780 | 743/904 (82 %) | 10 diff (98.9 %id) | |||
BU070045 | insulinoma, Pancreas | .a | 3672 to 4234 | 8 to 570 | 563/570 (98 %) | 6 diff (99.0 %id) | |||
BU517158 | leiomyosarcoma, uterus | .a | 1592 to 2407 | 1 to 821 | 821/863 (95 %) | 17 diff (98.1 %id) | |||
BU522097 | leiomyosarcoma, uterus | .a | 1856 to 2600 | 12 to 764 | 753/833 (90 %) | 18 diff (97.9 %id) | |||
BU567406 | testis | .a | 2520 to 3257 | 3 to 743 | AAA | 741/785 (94 %) | 18 diff (97.8 %id) | ||
BU568651 | testis | .a | 2449 to 3248 | 1 to 799 | 799/800 (99 %) | 6 diff (99.3 %id) | |||
CB985784 | Pooled-Glandular | .a | 2661 to 3263 | 1 to 609 | 609/782 (77 %) | 12 diff (98.5 %id) | |||
CD108467 | brain, Pituitary | .h | 1 to 896 | 1 to 902 | exact | tiling clone, | 902/902 (100 %) | 9 diff (99.1 %id) | |
CF147159 | CNCAP(3)T-225 cell line, Prostate | .a | 3665 to 4335 | 1 to 671 | 671/671 (100 %) | 7 diff (99.0 %id) | |||
CF785874 | mixed | .b | 53 to 644 | 22 to 615 | 594/816 (72 %) | 38 diff (95.4 %id) | |||
TI_57170286 | .e | 1628 to 2333 | 29 to 762 | 654/842 (77 %) | 33 diff (96.1 %id) | ||||
TI_57175609 | .a | 2290 to 3084 | 65 to 860 | 796/860 (92 %) | 10 diff (98.9 %id) | ||||
TI_57176339 | .e | 1693 to 2553 | 90 to 951 | 862/952 (90 %) | 12 diff (98.8 %id) | ||||
TI_57176640 | .e | 1724 to 2578 | 71 to 921 | 851/924 (92 %) | 14 diff (98.5 %id) | ||||
TI_57177121 | .f | 1 to 847 | 32 to 876 | P251H Q252R A253L L254A P255V ... | 845/877 (96 %) | 13 diff (98.6 %id) | |||
CB133355 | Liver | .a | 3651 to 3901 | 24 to 274 | 251/274 (91 %) | 6 diff (97.9 %id) | |||
L37702 | .a | 952 to 1100 | 1 to 147 | 147/148 (99 %) | 5 diff (96.7 %id) | ||||
AI751748 | Bone, Hip | .a | 3678 to 4082 | 8 to 412 | 405/412 (98 %) | 6 diff (98.6 %id) | |||
NM_198567.4 | .c | 1 to 2056 | 1 to 2056 | exact | RefSeq, AAA | 2056/2056 (100 %) | 0 diff (100 %id) | ||
DC372557 | .b | 1 to 538 | 5 to 543 | 543/543 (100 %) | 1 diff (99.9 %id) | ||||
DA808318 | brain | .b | 1 to 579 | 2 to 581 | capped | 580/580 (100 %) | 1 diff (99.9 %id) | ||
DA851117 | placenta | .b | 41 to 593 | 2 to 554 | capped | 553/553 (100 %) | 0 diff (100 %id) | ||
BM792850 | Ascites, stomach | .a | 2340 to 2955 | 1 to 614 | 614/614 (100 %) | 3 diff (99.6 %id) | |||
TI_1948153541 | .a | 2097 to 3040 | 1062 to 121 | 942/1261 (74 %) | 33 diff (97.4 %id) | ||||
TI_1948153664 | .e | 1973 to 2500 | 126 to 653 | fully sequenced, | 528/653 (80 %) | 6 diff (99.1 %id) | |||
TI_1948153665 | .e | 2439 to 2980 | 661 to 120 | fully sequenced, | 542/661 (81 %) | 6 diff (99.1 %id) | |||
TI_1948153808 | .e | 1973 to 2500 | 123 to 649 | fully sequenced, | 527/649 (81 %) | 6 diff (99.1 %id) | |||
TI_1948153809 | .e | 2439 to 2980 | 658 to 116 | fully sequenced, | 543/658 (82 %) | 0 diff (100 %id) | |||
TI_1948153951 | .e | 1973 to 2500 | 124 to 651 | fully sequenced, | 528/651 (81 %) | 6 diff (99.1 %id) | |||
TI_1948153952 | .e | 2439 to 2980 | 661 to 120 | fully sequenced, | 542/661 (81 %) | 5 diff (99.3 %id) | |||
DR001596 | fetal brain | .a | 2035 to 2679 | 1 to 646 | 646/646 (100 %) | 6 diff (99.1 %id) | |||
BM145308 | leukopheresis | .a | 3651 to 4158 | 35 to 543 | 509/543 (93 %) | 6 diff (98.9 %id) | |||
BM193114 | leukopheresis | .b | 28 to 504 | 1 to 477 | 477/477 (100 %) | 3 diff (99.4 %id) | |||
BM150853 | leukopheresis | .a | 3651 to 4058 | 14 to 421 | AAA | 408/421 (96 %) | 6 diff (98.6 %id) | ||
BM150956 | leukopheresis | .a | 3160 to 3584 | 434 to 10 | 425/434 (97 %) | 0 diff (100 %id) | |||
BM152919 | leukopheresis | .b | 39 to 523 | 1 to 485 | 485/485 (100 %) | 11 diff (97.8 %id) | |||
DB067570 | testis | .k | 1 to 460 | 2 to 461 | E81X | tiling clone, capped | 460/460 (100 %) | 0 diff (100 %id) | |
TI_149299259 | .a | 2773 to 3579 | 883 to 83 | AAA | 801/802 (99 %) | 47 diff (94.2 %id) | |||
TI_149308544 | .a | 4016 to 4911 | 945 to 55 | tiling clone, | 891/1053 (84 %) | 0 diff (100 %id) | |||
TI_154017910 | .a | 3972 to 4685 | 772 to 61 | 712/773 (92 %) | 0 diff (100 %id) | ||||
TI_154123775 | .a | 2885 to 3579 | 791 to 101 | AAA | 691/914 (75 %) | 12 diff (98.7 %id) | |||
TI_154148375 | .a | 2437 to 2994 | 89 to 643 | 555/556 (99 %) | 9 diff (98.4 %id) | ||||
TI_154179741 | .a | 3672 to 4435 | 70 to 829 | 760/808 (94 %) | 9 diff (98.9 %id) | ||||
CB851455 | lung, Primary Lung Epithelial Cells | .a | 4184 to 4911 | 736 to 9 | 728/736 (98 %) | 0 diff (100 %id) | |||
BU684936 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 3089 to 3579 | 504 to 14 | AAA | 491/491 (100 %) | 0 diff (100 %id) | ||
CA415712 | Chondrosarcoma Cell line | .a | 3087 to 3579 | 506 to 14 | AAA | 493/493 (100 %) | 3 diff (99.4 %id) | ||
CA427292 | Cell Line, Chondrosarcoma | .a | 3856 to 4620 | 776 to 12 | tiling clone, AAA | 765/766 (99 %) | 2 diff (99.8 %id) | ||
Z20115 | .a | 2050 to 2245 | 231 to 36 | 196/231 (84 %) | 1 diff (99.6 %id) | ||||
AK126204 | thymus | .e | 1693 to 2553 | 90 to 951 | available from FLJ, | This clone was ignored | 862/952 (90 %) | 12 diff (98.8 %id) | |
BX394664 | Neuroblastoma Cot 25-normalized | .e | 1724 to 2578 | 71 to 921 | This clone was ignored | 851/924 (92 %) | 14 diff (98.5 %id) | ||
AV656739 | corresponding non cancerous liver tissue | .f | 1 to 847 | 32 to 876 | This clone was ignored | 845/877 (96 %) | 13 diff (98.6 %id) | ||
AV719871 | corresponding non cancerous liver tissue | .a | 3651 to 3901 | 24 to 274 | This clone was ignored | 251/274 (91 %) | 6 diff (97.9 %id) | ||
DB455102. matches multiple genes | testis | .a | 952 to 1100 | 1 to 147 | This clone was ignored, also hits gene LOC202181 | 147/148 (99 %) | 5 diff (96.7 %id) | ||
DB455102. matches multiple genes | testis | .a | 3678 to 4082 | 8 to 412 | This clone was ignored, also hits gene LOC202181 | 405/412 (98 %) | 6 diff (98.6 %id) | ||
DB481283. matches multiple genes | hippocampus | .a | 3678 to 4082 | 8 to 412 | Suspected internal deletion, this clone was ignored, also hits gene KIAA1191 | 405/412 (98 %) | 6 diff (98.6 %id) | ||
DB481283. matches multiple genes | hippocampus | .c | 1 to 2056 | 1 to 2056 | RefSeq, | Suspected internal deletion, this clone was ignored, also hits gene KIAA1191 | 2056/2056 (100 %) | 0 diff (100 %id) | |
DB550098. matches multiple genes | hippocampus | .b | 1 to 538 | 5 to 543 | Suspected internal deletion, this clone was ignored, also hits gene KIAA1191 | 543/543 (100 %) | 1 diff (99.9 %id) | ||
DB550098. matches multiple genes | hippocampus | .b | 1 to 579 | 2 to 581 | Suspected internal deletion, this clone was ignored, also hits gene KIAA1191 | 580/580 (100 %) | 1 diff (99.9 %id) | ||
DA570524 | whole embryo, mainly head | .b | 41 to 593 | 2 to 554 | capped | This clone was ignored | 553/553 (100 %) | 0 diff (100 %id) | |
DB357297 | whole embryo, mainly head | .a | 2340 to 2955 | 1 to 614 | This clone was ignored | 614/614 (100 %) | 3 diff (99.6 %id) | ||
BF513104 | .a | 2340 to 2955 | 1 to 614 | AAA | 614/614 (100 %) | 3 diff (99.6 %id) | |||
BG719810 | testis | .a | 2097 to 3040 | 1062 to 121 | This clone was ignored | 942/1261 (74 %) | 33 diff (97.4 %id) | ||
BG773254. matches multiple genes | testis | .e | 1973 to 2500 | 126 to 653 | This clone was ignored, also hits gene LOC202181 | 528/653 (80 %) | 6 diff (99.1 %id) | ||
BG773254. matches multiple genes | testis | .e | 2439 to 2980 | 661 to 120 | This clone was ignored, also hits gene LOC202181 | 542/661 (81 %) | 6 diff (99.1 %id) | ||
DB133423 | thymus | .e | 1973 to 2500 | 123 to 649 | capped | 527/649 (81 %) | 6 diff (99.1 %id) | ||
DB344787 | thymus | .e | 2439 to 2980 | 658 to 116 | 543/658 (82 %) | 0 diff (100 %id) | |||
TI_1948153951 | .e | 1973 to 2500 | 124 to 651 | fully sequenced, | 528/651 (81 %) | 6 diff (99.1 %id) | |||
TI_1948153952 | .e | 2439 to 2980 | 661 to 120 | fully sequenced, | 542/661 (81 %) | 5 diff (99.3 %id) | |||
DR001596 | fetal brain | .a | 2035 to 2679 | 1 to 646 | 646/646 (100 %) | 6 diff (99.1 %id) | |||
BM145308 | leukopheresis | .a | 3651 to 4158 | 35 to 543 | 509/543 (93 %) | 6 diff (98.9 %id) | |||
BM193114 | leukopheresis | .b | 28 to 504 | 1 to 477 | 477/477 (100 %) | 3 diff (99.4 %id) | |||
BM150853 | leukopheresis | .a | 3651 to 4058 | 14 to 421 | AAA | 408/421 (96 %) | 6 diff (98.6 %id) | ||
BM150956 | leukopheresis | .a | 3160 to 3584 | 434 to 10 | 425/434 (97 %) | 0 diff (100 %id) | |||
BM152919 | leukopheresis | .b | 39 to 523 | 1 to 485 | 485/485 (100 %) | 11 diff (97.8 %id) | |||
DB067570 | testis | .k | 1 to 460 | 2 to 461 | E81X | tiling clone, capped | 460/460 (100 %) | 0 diff (100 %id) | |
TI_149299259 | .a | 2773 to 3579 | 883 to 83 | AAA | 801/802 (99 %) | 47 diff (94.2 %id) | |||
TI_149308544 | .a | 4016 to 4911 | 945 to 55 | tiling clone, | 891/1053 (84 %) | 0 diff (100 %id) | |||
TI_154017910 | .a | 3972 to 4685 | 772 to 61 | 712/773 (92 %) | 0 diff (100 %id) | ||||
TI_154123775 | .a | 2885 to 3579 | 791 to 101 | AAA | 691/914 (75 %) | 12 diff (98.7 %id) | |||
TI_154148375 | .a | 2437 to 2994 | 89 to 643 | 555/556 (99 %) | 9 diff (98.4 %id) | ||||
TI_154179741 | .a | 3672 to 4435 | 70 to 829 | 760/808 (94 %) | 9 diff (98.9 %id) | ||||
CB851455 | lung, Primary Lung Epithelial Cells | .a | 4184 to 4911 | 736 to 9 | 728/736 (98 %) | 0 diff (100 %id) | |||
CB851455 | lung, Primary Lung Epithelial Cells | .a | 4184 to 4911 | 736 to 9 | 728/736 (98 %) | 0 diff (100 %id) | |||
BU684936 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 3089 to 3579 | 504 to 14 | AAA | 491/491 (100 %) | 0 diff (100 %id) | ||
BU684936 | lung, Primary Lung Cystic Fibrosis EpithelialCells | .a | 3089 to 3579 | 504 to 14 | AAA | 491/491 (100 %) | 0 diff (100 %id) | ||
CA415712 | Chondrosarcoma Cell line | .a | 3087 to 3579 | 506 to 14 | AAA | 493/493 (100 %) | 3 diff (99.4 %id) | ||
CA427292 | Cell Line, Chondrosarcoma | .a | 3856 to 4620 | 776 to 12 | tiling clone, AAA | 765/766 (99 %) | 2 diff (99.8 %id) | ||
CA427292 | Cell Line, Chondrosarcoma | .a | 3856 to 4620 | 776 to 12 | tiling clone, AAA | 765/766 (99 %) | 2 diff (99.8 %id) | ||
Z20115 | .a | 2050 to 2245 | 231 to 36 | 196/231 (84 %) | 1 diff (99.6 %id) |