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Gene SLC6A10PTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
36 supporting clones for gene SLC6A10P back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA405965.
matches multiple genes
  .a 1 to 468 1 to 464   tiling clone, also hits gene CALCOCO2, LOC653562 464/465
(99 %)
6 diff
(98.8 %id)
TI_1320130831.
matches multiple genes
  .a 197 to 1106 46 to 949   tiling clone, also hits gene LOC653562 904/1220
(74 %)
16 diff
(98.7 %id)
TI_1320130833   .a 197 to 1215 40 to 1055       1016/1226
(82 %)
13 diff
(99.0 %id)
TI_1320133807.
matches multiple genes
  .a 197 to 1069 236 to 1106     Submitted on the opposite strand, also hits gene LOC653562 871/1128
(77 %)
36 diff
(96.9 %id)
TI_1320130837   .a 202 to 1216 1076 to 66       1011/1213
(83 %)
7 diff
(99.5 %id)
TI_1320130835   .a 204 to 1216 1070 to 60       1011/1232
(82 %)
5 diff
(99.6 %id)
BC117243 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 205 to 1216 1 to 1012   tiling clone,   1012/1012
(100 %)
0 diff
(100 %id)
AK125843 testis .b 1 to 3839 2 to 3840   tiling clone, available from FLJ,   3840/3840
(100 %)
2 diff
(100.0 %id)
NR_003083.2   .b 1 to 3839 1 to 3839   RefSeq,   3839/3839
(100 %)
1 diff
(100.0 %id)
DB065965 testis .b 1 to 527 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DB027614.
matches multiple genes
testis .b 514 to 1081 2 to 569   tiling clone, capped also hits gene nutema 568/568
(100 %)
1 diff
(99.9 %id)
BX282730.
matches multiple genes
serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 922 to 1400 1 to 479   tiling clone, also hits gene nutema 479/479
(100 %)
1 diff
(99.8 %id)
BI044551.
matches multiple genes
ovary .b 965 to 1571 11 to 617     also hits gene nutema 607/618
(98 %)
22 diff
(96.5 %id)
DB039199.
matches multiple genes
testis .b 1186 to 1762 2 to 578   tiling clone, capped also hits gene nutema 577/577
(100 %)
3 diff
(99.5 %id)
DB050531.
matches multiple genes
testis .b 1207 to 1768 2 to 563   tiling clone, capped also hits gene nutema 562/562
(100 %)
2 diff
(99.7 %id)
R13048.
matches multiple genes
whole brain .b 1215 to 1539 14 to 340     also hits gene nutema, SLC6A8 327/381
(85 %)
14 diff
(96.4 %id)
CD558010.
matches multiple genes
testis .b 1299 to 1860 1 to 575   tiling clone, also hits gene nutema 575/878
(65 %)
27 diff
(97.0 %id)
BF873832 lung_tumor .b 1314 to 1647 17 to 351       335/351
(95 %)
14 diff
(96.1 %id)
BF842245.
matches multiple genes
head_neck .b 2291 to 2717 433 to 5   tiling clone, Submitted on the opposite strand, also hits gene LOC653562 429/433
(99 %)
0 diff
(100 %id)
BQ375638 testis_normal .b 2973 to 3174 204 to 3       202/204
(99 %)
9 diff
(95.6 %id)
TI_1948240536.
matches multiple genes
  .b 3025 to 3438 1024 to 604     Submitted on the opposite strand, also hits gene LOC653562 421/1345
(31 %)
27 diff
(98.0 %id)
TI_1948240818.
matches multiple genes
  .b 3028 to 3438 1010 to 599   AAA Submitted on the opposite strand, also hits gene LOC653562 413/1278
(32 %)
22 diff
(98.3 %id)
TI_1948241099.
matches multiple genes
  .b 3030 to 3438 1012 to 604     Submitted on the opposite strand, also hits gene LOC653562 409/1284
(31 %)
14 diff
(99.0 %id)
BC068290.
matches multiple genes
testis .b 3068 to 3839 35 to 806   tiling clone, available from MGC, AAA also hits gene LOC653562 772/806
(95 %)
12 diff
(98.6 %id)
BQ333009 lung_tumor .b 3124 to 3424 1 to 310       317/319
(99 %)
27 diff
(91.6 %id)
TI_1948240277.
matches multiple genes
  .b 3129 to 3438 906 to 597     Submitted on the opposite strand, also hits gene LOC653562 310/1296
(23 %)
15 diff
(98.9 %id)
AA448103   .b 3131 to 3486 1 to 354   fully sequenced,   354/354
(100 %)
2 diff
(99.5 %id)
AI889142.
matches multiple genes
serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 3178 to 3839 662 to 1     also hits gene LOC653562 662/662
(100 %)
6 diff
(99.1 %id)
DB339696 testis .b 3294 to 3839 546 to 1       546/547
(99 %)
0 diff
(100 %id)
AA815427.
matches multiple genes
  .b 3343 to 3842 499 to 1   tiling clone, also hits gene LOC653562 499/499
(100 %)
11 diff
(97.8 %id)
AA719064   .b 3387 to 3842 449 to 1       449/449
(100 %)
8 diff
(98.3 %id)
AA961928 pooled .b 3403 to 3842 441 to 1       441/441
(100 %)
1 diff
(99.8 %id)
AA447604   .b 3446 to 3844 400 to 1   tiling clone, fully sequenced,   400/400
(100 %)
1 diff
(99.8 %id)
BM664603.
matches multiple genes
eye, human retina .b 3448 to 3839 401 to 19   AAA also hits gene SLC6A8 383/383
(100 %)
23 diff
(94.0 %id)
AA707453   .c 1 to 506 510 to 3 A23R M24H W26L A27G F28L ... tiling clone,   508/510
(99 %)
2 diff
(99.7 %id)
DB078311 testis .d 1 to 577 2 to 578 exact tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
DB066003 testis Gene SLC6A10P, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C