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Gene C3orf67TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
94 supporting clones for gene C3orf67 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB462046 testis .a 1 to 679 1 to 678   tiling clone,   678/688
(98 %)
7 diff
(99.0 %id)
AK124111 testis .a 94 to 2646 1 to 2553   tiling clone, available from FLJ,   2553/2553
(100 %)
2 diff
(100.0 %id)
DB024000 testis .a 95 to 651 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
NM_198463.2   .a 96 to 2646 1 to 2551   RefSeq,   2551/2551
(100 %)
0 diff
(100 %id)
BC132815 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 282 to 2231 1 to 1950       1950/1950
(100 %)
0 diff
(100 %id)
BC151142 Testicle, PCR rescued clones .a 282 to 2231 1 to 1950       1950/1950
(100 %)
0 diff
(100 %id)
TI_1752769526   .a 744 to 1929 6 to 1184       1179/1267
(93 %)
18 diff
(98.6 %id)
DA347394 substantia nigra .a 1005 to 1578 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
TI_1752768582   .a 1139 to 2231 1151 to 61     Submitted on the opposite strand 1091/1278
(85 %)
12 diff
(99.1 %id)
DA380185 thalamus .a 1160 to 1705 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BG193460   .a 1717 to 2469 7 to 762       763/826
(92 %)
63 diff
(92.4 %id)
BG216279   .a 1717 to 2299 1 to 587       591/760
(77 %)
45 diff
(94.1 %id)
BG187167   .a 1720 to 2544 36 to 838       804/846
(95 %)
57 diff
(93.3 %id)
BG188760   .a 1720 to 2089 1 to 371       371/371
(100 %)
4 diff
(99.0 %id)
BG210459   .a 1720 to 2452 40 to 762       725/783
(92 %)
59 diff
(92.5 %id)
BG213597   .a 1720 to 2444 36 to 763       729/822
(88 %)
34 diff
(95.9 %id)
BG188759   .a 1724 to 2523 1 to 802       802/806
(99 %)
23 diff
(97.2 %id)
BG192378   .a 1724 to 2447 1 to 711       711/839
(84 %)
44 diff
(94.8 %id)
BG201425   .a 1724 to 2414 1 to 689       689/851
(80 %)
20 diff
(97.7 %id)
BG205192   .a 1724 to 2493 1 to 766       766/767
(99 %)
29 diff
(96.3 %id)
BG210458   .a 1724 to 2485 1 to 760       760/815
(93 %)
20 diff
(97.6 %id)
BG193461   .a 1983 to 2241 1 to 256       254/256
(99 %)
6 diff
(97.7 %id)
DB527473 testis .a 1988 to 2646 20 to 678     Submitted on the opposite strand 660/678
(97 %)
15 diff
(97.8 %id)
BG198992   .a 1989 to 2631 659 to 16     Submitted on the opposite strand 644/811
(79 %)
2 diff
(99.8 %id)
BG205193   .a 1990 to 2636 659 to 13     Submitted on the opposite strand 647/659
(98 %)
0 diff
(100 %id)
BG218496   .a 1991 to 2637 656 to 9     Submitted on the opposite strand 648/659
(98 %)
2 diff
(99.7 %id)
BG210975   .a 2009 to 2643 23 to 653   AAA   631/653
(96 %)
13 diff
(98.1 %id)
AA521262 germinal center B cell .a 2100 to 2649 562 to 13   tiling clone, AAA   550/550
(100 %)
3 diff
(99.5 %id)
DB336276 testis .a 2122 to 2646 526 to 1       526/526
(100 %)
1 diff
(99.9 %id)
AA649165 germinal center B cell .a 2205 to 2649 457 to 13   AAA   445/445
(100 %)
0 diff
(100 %id)
AW514194 pooled .a 2232 to 2645 414 to 3       412/414
(99 %)
0 diff
(100 %id)
FN103015 breast carcinoma .a 2319 to 2415 1 to 96       96/101
(95 %)
4 diff
(96.1 %id)
T24053   .a 2402 to 2648 249 to 2       248/249
(99 %)
0 diff
(100 %id)
AK124920 substantia nigra .b 1 to 2020 2 to 2021 exact tiling clone, available from FLJ,   2021/2021
(100 %)
1 diff
(100.0 %id)
DB094839 testis .b 903 to 1453 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
CF146131 CNCAP(3)T-225 cell line, Prostate .b 1048 to 1396 8 to 356       349/356
(98 %)
6 diff
(98.4 %id)
CF144904 CNCAP(3)T-225 cell line, Prostate .b 1048 to 1559 8 to 519       512/519
(98 %)
6 diff
(98.9 %id)
TI_154177050   .b 1048 to 1616 79 to 650       572/1049
(54 %)
9 diff
(99.2 %id)
TI_154178474   .b 1048 to 1591 81 to 620       540/551
(98 %)
17 diff
(97.0 %id)
BQ220520 melanotic melanoma, skin .b 1487 to 2203 139 to 855   tiling clone,   717/855
(83 %)
0 diff
(100 %id)
DC401524 testis .c 1 to 539 1 to 541   tiling clone,   541/541
(100 %)
2 diff
(99.7 %id)
BG717597 testis .c 14 to 612 1 to 598   available from MGC,   598/598
(100 %)
8 diff
(98.7 %id)
DC403333 testis .c 14 to 577 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
BC050317 testis .c 19 to 2778 1 to 2759 P115S E116* tiling clone, available from MGC, AAA   2759/2759
(100 %)
4 diff
(99.9 %id)
DB459511 testis .c 21 to 504 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BM452274 melanotic melanoma, skin .c 40 to 697 1 to 658   available from MGC,   658/1120
(58 %)
1 diff
(100.0 %id)
DB446321.
matches multiple genes
testis .c 45 to 492 1 to 442     Submitted on the opposite strand, also hits gene SEPT10 442/442
(100 %)
14 diff
(96.9 %id)
BM801395 duodenal adenocarcinoma, cell line, small intestine .c 45 to 812 1 to 773   tiling clone,   773/949
(81 %)
12 diff
(98.8 %id)
DB453502 testis .c 69 to 574 1 to 506       506/506
(100 %)
1 diff
(99.9 %id)
BI462063 testis .c 114 to 697 1 to 585       585/913
(64 %)
6 diff
(99.4 %id)
DC424243   .c 126 to 697 1 to 573       573/764
(75 %)
4 diff
(99.5 %id)
DC339954 thalamus .c 292 to 854 1 to 563       563/563
(100 %)
0 diff
(100 %id)
CR744740 pooled .c 1453 to 2237 1 to 785   tiling clone,   785/792
(99 %)
1 diff
(99.9 %id)
BC075863 Skin, melanotic melanoma. .d 1 to 4107 1 to 4108 exact tiling clone, available from MGC, AAA   4108/4108
(100 %)
1 diff
(100.0 %id)
BI850466 Bone, osteosarcoma, cell line .d 1718 to 2409 1 to 691       691/691
(100 %)
4 diff
(99.5 %id)
BG027157 Bone, osteosarcoma, cell line .d 1719 to 2388 1 to 671       671/924
(72 %)
21 diff
(97.8 %id)
BX108085 germinal center B cell .d 2819 to 3283 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
AA251606 germinal center B cell .d 2819 to 3318 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
AJ710451 heart .d 3369 to 3706 1 to 338   AAA   338/338
(100 %)
0 diff
(100 %id)
AW978563   .d 3379 to 4101 722 to 1     Submitted on the opposite strand 722/724
(99 %)
6 diff
(99.2 %id)
AJ710467 heart .d 3487 to 3706 22 to 241   AAA   220/241
(91 %)
6 diff
(97.6 %id)
AA251549 germinal center B cell .d 3627 to 4103 477 to 1       477/477
(100 %)
0 diff
(100 %id)
AA830398 germinal center B cell .d 3669 to 4102 445 to 12   AAA   434/434
(100 %)
0 diff
(100 %id)
BQ014738 Chondrosarcoma, Left Pubic Bone .e 1 to 712 716 to 5 F34X L38X tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 712/716
(99 %)
0 diff
(100 %id)
AA912130 pooled .e 266 to 712 452 to 6       447/452
(98 %)
2 diff
(99.6 %id)
AI240479 pooled .e 388 to 716 334 to 5   tiling clone,   330/334
(98 %)
1 diff
(99.8 %id)
AK296111 thalamus .f 1 to 949 1 to 949 exact tiling clone,   949/949
(100 %)
1 diff
(99.9 %id)
AK128200 testis .g 1 to 2912 2 to 2913 exact tiling clone, available from FLJ,   2913/2913
(100 %)
3 diff
(99.9 %id)
BC140002 Clones donated by RIKEN .h 1 to 830 2 to 831 exact tiling clone, AAA   831/831
(100 %)
0 diff
(100 %id)
DB442266 testis .h 2 to 440 1 to 439 H18S G19R G20R A21C F22I ...     439/448
(97 %)
6 diff
(98.7 %id)
DA696264   .i 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
AI809506 pooled .i 405 to 865 464 to 4   tiling clone,   461/464
(99 %)
0 diff
(100 %id)
AA437052   .j 1 to 433 1 to 431   tiling clone, fully sequenced,   431/431
(100 %)
2 diff
(99.6 %id)
AA437320   .j 415 to 673 262 to 4   tiling clone, fully sequenced,   259/262
(98 %)
0 diff
(100 %id)
AA815414   .k 1 to 428 431 to 4 exact tiling clone,   428/431
(99 %)
0 diff
(100 %id)
DB524971 testis .l 1 to 655 1 to 655 exact tiling clone, Submitted on the opposite strand 655/656
(99 %)
2 diff
(99.7 %id)
BX111379 pooled germ cell tumors .l 330 to 646 76 to 392   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 317/392
(80 %)
6 diff
(98.5 %id)
AI342004 pooled germ cell tumors .l 330 to 646 317 to 1       317/361
(87 %)
0 diff
(100 %id)
AI656215 pooled germ cell tumors .l 330 to 646 317 to 1       317/361
(87 %)
0 diff
(100 %id)
AI651217 pooled germ cell tumors .l 330 to 646 317 to 1       317/361
(87 %)
3 diff
(99.2 %id)
AI652731 pooled germ cell tumors .l 330 to 645 315 to 1       315/359
(87 %)
4 diff
(98.9 %id)
AI654875 pooled germ cell tumors .l 330 to 646 317 to 1       317/361
(87 %)
0 diff
(100 %id)
AW204126   .l 330 to 646 334 to 18   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 317/404
(78 %)
0 diff
(100 %id)
AW594555 pooled germ cell tumors .l 330 to 645 317 to 2       316/361
(87 %)
0 diff
(100 %id)
BG150374 pooled germ cell tumors .l 330 to 646 317 to 1       317/361
(87 %)
0 diff
(100 %id)
TI_153987803   .l 330 to 646 407 to 91   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 317/601
(52 %)
0 diff
(100 %id)
DB518973 testis .l 438 to 628 13 to 203     Submitted on the opposite strand 191/211
(90 %)
2 diff
(99.1 %id)
AA969138 pooled .m 1 to 432 434 to 3 exact tiling clone,   432/434
(99 %)
1 diff
(99.8 %id)
DB525927 testis .n 1 to 421 1 to 421 exact tiling clone, Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
BX107912   .n 23 to 421 1 to 399 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 399/399
(100 %)
0 diff
(100 %id)
AI220558   .n 54 to 419 380 to 15 exact AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 366/368
(99 %)
0 diff
(100 %id)
AI126226   .n 55 to 419 379 to 15 exact AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 365/367
(99 %)
0 diff
(100 %id)
DB460520 testis Gene C3orf67, variant not shown         Suspected internal deletion, this clone was ignored    
AK123809   Gene C3orf67, variant not shown       available from FLJ, This clone was ignored    
DB324018   Gene C3orf67, variant not shown         This clone was ignored    
DA707382   Gene C3orf67, variant not shown       capped This clone was ignored    
AI685153 pooled Gene C3orf67, variant not shown         This clone was ignored    
DB076191 testis Gene C3orf67, variant not shown       capped This clone was ignored    
DB340572 testis Gene C3orf67, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C