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Gene C15orf54TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
24 supporting clones for gene C15orf54 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DN999835   .a 1 to 318 9 to 326   tiling clone,   318/326
(97 %)
11 diff
(96.7 %id)
BX647708 human lung endothel primary cell culture .a 15 to 3088 1 to 3075 L63P R64Q F65V L66P Y67L ... tiling clone, available from DKFZ, AAA   3075/3075
(100 %)
8 diff
(99.8 %id)
NM_207445.2   .a 16 to 3095 1 to 3080 exact RefSeq,   3080/3080
(100 %)
0 diff
(100 %id)
DN999353   .a 35 to 567 8 to 540       533/540
(98 %)
6 diff
(98.9 %id)
AK096850   .a 50 to 3084 1 to 3034 exact tiling clone, available from FLJ,   3034/3041
(99 %)
6 diff
(99.9 %id)
DA881808   .a 51 to 618 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA884617   .a 51 to 624 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BC137300 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 98 to 1161 1 to 1064 exact     1064/1064
(100 %)
1 diff
(100.0 %id)
BC137301 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 98 to 1161 1 to 1064 exact     1064/1064
(100 %)
1 diff
(100.0 %id)
TI_1959499085   .a 98 to 1162 65 to 1125 exact   Submitted on the opposite strand 1061/1287
(82 %)
16 diff
(98.8 %id)
TI_1959503129   .a 98 to 1151 61 to 1108 exact   Submitted on the opposite strand 1048/1264
(82 %)
17 diff
(98.7 %id)
TI_1968234099   .a 278 to 1161 1130 to 252 L27Y W28G L29*     879/1262
(69 %)
0 diff
(100 %id)
DA883342   .a 285 to 829 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA886773   .a 285 to 835 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
FN168152 breast carcinoma .a 291 to 382 1 to 91       91/92
(98 %)
2 diff
(97.9 %id)
TI_1968232987   .a 301 to 1161 1100 to 253 E2S V3Y K4C F5S I6T ...     848/1229
(68 %)
0 diff
(100 %id)
TI_1959500093   .a 702 to 1162 1 to 461       461/1288
(35 %)
7 diff
(99.5 %id)
TI_1968231679   .a 704 to 1161 1 to 458       458/1296
(35 %)
7 diff
(99.5 %id)
BE621965 melanotic melanoma, skin .a 790 to 1369 1 to 581       581/709
(81 %)
9 diff
(98.8 %id)
DB330415   .a 2549 to 3084 544 to 8       537/544
(98 %)
0 diff
(100 %id)
BC171789 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 1 to 954 1 to 954 T59M tiling clone,   954/954
(100 %)
3 diff
(99.7 %id)
TI_2194695047   .b 2 to 973 49 to 1018 T59M tiling clone,   970/1281
(75 %)
17 diff
(98.7 %id)
TI_2194695059   .b 2 to 973 1023 to 55 T59M tiling clone,   969/1305
(74 %)
1 diff
(100.0 %id)
TI_2194699408   .b 2 to 967 48 to 1011 T59M tiling clone,   964/1284
(75 %)
15 diff
(98.9 %id)
TI_2194699789   .b 4 to 973 1018 to 51 T59M     968/1281
(75 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes D