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Gene CCDC79TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
23 supporting clones for gene CCDC79 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001136505.1   .a 1 to 2446 1 to 2446 exact RefSeq,   2446/2446
(100 %)
0 diff
(100 %id)
DB452572 testis .a 44 to 663 1 to 615   tiling clone,   615/655
(93 %)
23 diff
(96.5 %id)
DB452519 testis .a 49 to 710 1 to 658       658/658
(100 %)
4 diff
(99.4 %id)
TI_1520872829   .a 292 to 1370 1088 to 17   tiling clone,   1072/1233
(86 %)
9 diff
(99.3 %id)
DR731300 pooled .a 1244 to 1478 1 to 235   tiling clone,   235/235
(100 %)
0 diff
(100 %id)
BC126109 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 1 to 1933 1 to 1933 exact tiling clone,   1933/1933
(100 %)
1 diff
(100.0 %id)
TI_1520872837   .b 1 to 377 406 to 29       378/1220
(30 %)
1 diff
(100.0 %id)
TI_1520874151   .b 47 to 691 93 to 738       600/1032
(58 %)
51 diff
(95.1 %id)
TI_1520875685   .b 862 to 1934 1200 to 138   tiling clone,   1063/1283
(82 %)
15 diff
(98.9 %id)
TI_1520874523   .b 933 to 1924 1057 to 79       871/1293
(67 %)
96 diff
(92.6 %id)
TI_1520876299   .b 1503 to 1934 6 to 438       431/1273
(33 %)
7 diff
(99.5 %id)
AK093213 testis .c 1 to 2543 1 to 2231 exact tiling clone, available from FLJ, Suspected internal deletion 2231/2231
(100 %)
3 diff
(99.9 %id)
AX747993   .c 1 to 2543 1 to 2231 exact   Suspected internal deletion 2231/2231
(100 %)
3 diff
(99.9 %id)
DB636697 testis .c 1885 to 2538 1 to 654   tiling clone, Submitted on the opposite strand 654/654
(100 %)
1 diff
(99.9 %id)
DB518007 testis .c 2227 to 2885 1 to 658   tiling clone, Submitted on the opposite strand 658/658
(100 %)
1 diff
(99.9 %id)
BX088997   .c 2392 to 2852 1 to 461       461/461
(100 %)
0 diff
(100 %id)
DB518040 testis .c 2556 to 2885 1 to 331     Submitted on the opposite strand 331/331
(100 %)
17 diff
(94.9 %id)
DB518038 testis .c 2614 to 2885 1 to 273     Submitted on the opposite strand 273/273
(100 %)
16 diff
(94.2 %id)
AA758818   .c 2625 to 2942 321 to 4   tiling clone,   318/321
(99 %)
0 diff
(100 %id)
DB082013 testis .d 1 to 565 2 to 567 S32F Q33T E35G A36S L37F ... tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB462373 testis .e 1 to 479 1 to 480 I43N C44L Q45S Q46T N47K ... tiling clone,   480/480
(100 %)
2 diff
(99.6 %id)
DB527805 testis .f 1 to 631 1 to 629 exact tiling clone, AAA Submitted on the opposite strand 629/629
(100 %)
4 diff
(99.4 %id)
DB027018 testis Gene CCDC79, variant not shown       capped This clone was ignored    
DB336662 testis Gene CCDC79, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C