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Gene TTLL6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
77 supporting clones for gene TTLL6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC403800 testis .a 1 to 544 1 to 544   tiling clone,   544/544
(100 %)
1 diff
(99.9 %id)
DB442148 testis .a 108 to 542 1 to 435       435/435
(100 %)
0 diff
(100 %id)
NM_001130918.1   .a 108 to 3561 1 to 3454 exact RefSeq,   3454/3454
(100 %)
0 diff
(100 %id)
DB448036 testis .a 151 to 446 1 to 293       293/293
(100 %)
8 diff
(97.3 %id)
DC401840 testis .a 154 to 722 1 to 569       569/569
(100 %)
0 diff
(100 %id)
AK302952 testis .a 162 to 3551 1 to 3390   tiling clone,   3390/3390
(100 %)
2 diff
(100.0 %id)
DC399175 testis .a 162 to 714 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
DC402069 testis .a 162 to 737 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC402807 testis .a 162 to 713 1 to 552       552/552
(100 %)
3 diff
(99.5 %id)
DC403796 testis .a 162 to 707 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC416853 trachea .a 162 to 726 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
DC400109 testis .a 165 to 700 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DC402523 testis .a 165 to 706 1 to 542       542/542
(100 %)
0 diff
(100 %id)
DC401367 testis .a 184 to 714 1 to 531       531/531
(100 %)
0 diff
(100 %id)
AK097392 testis .a 196 to 2382 1 to 2187   available from FLJ,   2187/2187
(100 %)
4 diff
(99.9 %id)
DB020186 testis .a 197 to 755 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB082150 testis .a 210 to 731 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA069448 cerebellum .a 286 to 838 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB077293 testis .a 376 to 952 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
AK093127 testis .a 1156 to 3557 1 to 2402   tiling clone, available from FLJ,   2402/2402
(100 %)
1 diff
(100.0 %id)
AX747941   .a 1156 to 3557 1 to 2402       2402/2402
(100 %)
1 diff
(100.0 %id)
DB024475 testis .a 1157 to 1712 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB057405 testis .a 1157 to 1686 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
BQ082367 Ascites, stomach .a 1617 to 2287 1 to 671       671/671
(100 %)
0 diff
(100 %id)
Z43328 brain, total brain .a 1895 to 2239 1 to 342       342/342
(100 %)
2 diff
(99.5 %id)
TI_1948138943   .a 1901 to 2817 1047 to 127       921/1215
(75 %)
23 diff
(98.2 %id)
TI_1948139250   .a 1901 to 2817 1043 to 124       920/1238
(74 %)
20 diff
(98.4 %id)
TI_1948138635   .a 1984 to 2817 962 to 124       839/1274
(65 %)
12 diff
(99.1 %id)
TI_1948138636   .a 2182 to 2817 766 to 131       636/1413
(45 %)
1 diff
(100.0 %id)
TI_1948139251   .a 2254 to 2817 691 to 130       562/1359
(41 %)
12 diff
(99.2 %id)
TI_1948138944   .a 2268 to 2817 681 to 130       552/1383
(39 %)
17 diff
(98.8 %id)
BF873249 lung_tumor .a 2796 to 3211 1 to 416       416/416
(100 %)
3 diff
(99.3 %id)
AI026677   .a 3019 to 3552 536 to 3       534/536
(99 %)
0 diff
(100 %id)
DB336354 testis .a 3040 to 3557 519 to 1       519/519
(100 %)
2 diff
(99.7 %id)
BX109438   .a 3052 to 3523 1 to 473       473/473
(100 %)
2 diff
(99.6 %id)
AI798921 pooled .a 3068 to 3543 476 to 1       476/476
(100 %)
1 diff
(99.8 %id)
DB506831 testis .a 3076 to 3551 1 to 477     Submitted on the opposite strand 477/477
(100 %)
10 diff
(98.0 %id)
DB507051 testis .a 3079 to 3557 1 to 478     Submitted on the opposite strand 478/478
(100 %)
5 diff
(99.0 %id)
DB527364 testis .a 3080 to 3553 1 to 474     Submitted on the opposite strand 474/474
(100 %)
1 diff
(99.8 %id)
AL040321 testis .a 3102 to 3420 1 to 319       319/319
(100 %)
2 diff
(99.4 %id)
AI191893   .a 3120 to 3558 441 to 3       439/441
(99 %)
0 diff
(100 %id)
DB513215 testis .a 3121 to 3557 1 to 437     Submitted on the opposite strand 437/437
(100 %)
1 diff
(99.8 %id)
AI198624   .a 3136 to 3561 432 to 7   tiling clone,   426/432
(98 %)
0 diff
(100 %id)
AW469048 pooled .a 3137 to 3552 421 to 7       415/421
(98 %)
0 diff
(100 %id)
AA435642   .a 3177 to 3558 387 to 6       382/387
(98 %)
0 diff
(100 %id)
AW296167   .a 3199 to 3557 376 to 18   AAA   359/359
(100 %)
3 diff
(99.2 %id)
Z39402 brain, total brain .a 3229 to 3551 325 to 1       325/325
(100 %)
4 diff
(98.8 %id)
AI280163 pooled .a 3428 to 3561 136 to 3       134/136
(98 %)
0 diff
(100 %id)
BC041368 testis .b 1 to 4440 1 to 4440 K179E I221V tiling clone, available from MGC, AAA   4440/4440
(100 %)
7 diff
(99.9 %id)
BI465115 testis .b 1 to 725 6 to 745   available from MGC,   740/752
(98 %)
51 diff
(93.3 %id)
DA220560 brain .b 125 to 681 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BC033563 testis .c 1 to 2528 6 to 2533 E24V tiling clone, available from MGC, AAA   2533/2533
(100 %)
5 diff
(99.9 %id)
DB441913 testis .c 1 to 331 5 to 335       335/384
(87 %)
6 diff
(98.5 %id)
NM_173623.3   .c 1 to 2538 5 to 2542 exact RefSeq,   2542/2542
(100 %)
0 diff
(100 %id)
DB060297 testis .c 1 to 436 5 to 440   tiling clone, capped   439/439
(100 %)
0 diff
(100 %id)
TI_57173825   .c 22 to 614 33 to 625       593/625
(94 %)
6 diff
(99.1 %id)
TI_1948138339   .c 82 to 780 124 to 830       707/1365
(51 %)
34 diff
(97.6 %id)
TI_1948138633   .c 82 to 843 123 to 894       772/1294
(59 %)
33 diff
(97.5 %id)
TI_1948138634   .c 82 to 1076 123 to 1115       993/1414
(70 %)
41 diff
(97.2 %id)
TI_1948138941   .c 82 to 692 124 to 739       616/1428
(43 %)
28 diff
(98.1 %id)
TI_1948138942   .c 82 to 1060 121 to 1094       974/1359
(71 %)
27 diff
(98.1 %id)
TI_1948139248   .c 82 to 692 117 to 729       613/1314
(46 %)
29 diff
(97.8 %id)
TI_1948139249   .c 82 to 1152 123 to 1197       1075/1412
(76 %)
55 diff
(96.2 %id)
CV024804 mixed .c 86 to 699 1 to 608       608/615
(98 %)
12 diff
(98.1 %id)
TI_1948138340   .c 1039 to 1794 890 to 128       763/1501
(50 %)
22 diff
(98.6 %id)
AL834151 testis .d 1 to 3372 1 to 3372 exact tiling clone, available from DKFZ, AAA   3372/3372
(100 %)
4 diff
(99.9 %id)
AW877277 pnet .d 867 to 1444 1 to 585       585/585
(100 %)
29 diff
(95.1 %id)
BG722366 testis .e -9 to 703 1 to 715       715/715
(100 %)
14 diff
(98.1 %id)
DB025510 testis .e 1 to 540 9 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
DB030049 testis .e 1 to 597 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
BI825981 brain, medulla .e 22 to 614 1 to 593       593/593
(100 %)
0 diff
(100 %id)
AK310321 testis .e 118 to 1914 132 to 1928 exact tiling clone,   1928/1928
(100 %)
2 diff
(99.9 %id)
DB052988 testis .e 118 to 543 132 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DC404104 testis .f 1 to 588 1 to 588 W18G tiling clone,   588/588
(100 %)
1 diff
(99.9 %id)
DB065857 testis .g 1 to 542 2 to 543   tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
DC404188 testis .h 1 to 581 1 to 582 L32P A33G V35C R36E E37R ... tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
DC403056 testis .i 1 to 544 1 to 545 exact tiling clone,   545/545
(100 %)
1 diff
(99.9 %id)
DB461943 testis .j 1 to 479 1 to 479 exact tiling clone,   479/479
(100 %)
1 diff
(99.8 %id)
DB312694 thalamus Gene TTLL6, variant not shown         This clone was ignored    
DA414602 thalamus Gene TTLL6, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C