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Gene C20orf197TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
20 supporting clones for gene C20orf197 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC016338 Bone marrow, acute myelogenous leukemia .a-u 1 to 978 4 to 981   tiling clone, available from MGC, AAA   978/978
(100 %)
1 diff
(99.9 %id)
BF241953 bone marrow, from acute myelogenous leukemia .a-u 1 to 765 1 to 764   available from MGC,   764/846
(90 %)
38 diff
(95.6 %id)
AI937787 anaplastic oligodendroglioma, brain .a-u 698 to 977 296 to 17   AAA   280/280
(100 %)
2 diff
(99.3 %id)
AY358539   .a-u 839 to 5278 1 to 4440 C27R tiling clone,   4440/4440
(100 %)
6 diff
(99.9 %id)
AK091179 tongue, tumor tissue .b 1 to 2731 2 to 2732 exact tiling clone, available from FLJ,   2732/2732
(100 %)
1 diff
(100.0 %id)
AX746831   .b 1 to 2731 2 to 2732 exact     2732/2732
(100 %)
1 diff
(100.0 %id)
NM_173644.1   .b 1 to 2731 2 to 2732 exact RefSeq,   2732/2732
(100 %)
1 diff
(100.0 %id)
DA438475 tongue, tumor tissue .b 1 to 588 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
AA312243   .b 25 to 356 1 to 332   tiling clone,   332/332
(100 %)
0 diff
(100 %id)
BC101349 PCR rescued clones .b 134 to 1950 1 to 1817 exact     1817/1817
(100 %)
2 diff
(99.9 %id)
BC101351 PCR rescued clones .b 134 to 1950 1 to 1817 exact     1817/1817
(100 %)
2 diff
(99.9 %id)
AI522199 Kidney .b 2040 to 2381 342 to 1       342/342
(100 %)
0 diff
(100 %id)
DB313523 tongue, tumor tissue .b 2201 to 2731 531 to 1       531/531
(100 %)
0 diff
(100 %id)
BC101350 PCR rescued clones .c 1 to 1426 1 to 1426 exact tiling clone,   1426/1426
(100 %)
2 diff
(99.9 %id)
CB054966 brain, glioblastoma (pooled) .d 1 to 653 1 to 653 V2E tiling clone,   653/653
(100 %)
4 diff
(99.4 %id)
BM708540 eye, RPE and Choroid .d 48 to 141 1 to 94   fully sequenced,   94/94
(100 %)
0 diff
(100 %id)
BU730836 eye, RPE and Choroid .d 111 to 669 577 to 19   tiling clone, fully sequenced, AAA   559/559
(100 %)
0 diff
(100 %id)
AW893320 nervous_normal .d 201 to 466 266 to 3       264/268
(98 %)
0 diff
(100 %id)
AW893335 nervous_normal .d 201 to 458 259 to 3       257/261
(98 %)
0 diff
(100 %id)
AW452941   .d 402 to 608 17 to 223   AAA Submitted on the opposite strand 207/233
(88 %)
1 diff
(99.6 %id)
CR744567 Kidney .e 1 to 465 1 to 465 exact tiling clone,   465/465
(100 %)
0 diff
(100 %id)
AI948478 2 pooled tumors (clear cell type), Kidney .f-u 1 to 313 328 to 16 exact tiling clone, AAA   313/313
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a-u, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes