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Gene NEK10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
77 supporting clones for gene NEK10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK123061 trachea .a 1 to 2638 1 to 2638 exact tiling clone, available from FLJ,   2638/2638
(100 %)
2 diff
(100.0 %id)
NM_199347.2   .a 1 to 2638 1 to 2638 exact RefSeq, AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 2638/2638
(100 %)
0 diff
(100 %id)
DB200339 trachea .a 2 to 582 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB093908 testis .a 21 to 572 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB094444 testis .a 22 to 582 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB075155 testis .a 28 to 564 2 to 538   capped   537/539
(99 %)
1 diff
(99.9 %id)
DB076008 testis .a 28 to 569 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB084888 testis .a 28 to 580 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB061810 testis .a 31 to 583 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB100605 testis .a 31 to 623 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
CD698396 normal nasopharynx .a 74 to 169 4 to 101       98/101
(97 %)
6 diff
(94.1 %id)
DA249901 brain .a 1107 to 1694 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
BU568655 testis .a 1403 to 2070 1 to 677       677/831
(81 %)
23 diff
(97.3 %id)
CR738506   .a 1552 to 2023 1 to 470       470/472
(99 %)
9 diff
(98.1 %id)
BU102129   .a 1986 to 2286 1 to 300       300/325
(92 %)
2 diff
(99.4 %id)
DB348312 trachea .a 2084 to 2638 557 to 1       557/557
(100 %)
3 diff
(99.5 %id)
DB045668 testis .b 1 to 566 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB038745 testis .b 3 to 580 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB028595 testis .b 18 to 602 2 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
DB029497 testis .b 18 to 595 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB042338 testis .b 18 to 558 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
BG717420 testis .b 43 to 718 1 to 677       677/682
(99 %)
8 diff
(98.9 %id)
AK057247 testis .b 48 to 2090 1 to 2043 exact tiling clone, available from FLJ,   2043/2043
(100 %)
3 diff
(99.9 %id)
DB451038 testis .b 59 to 533 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
BC045758 testis .c 1 to 2022 1 to 2022 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 2022/2022
(100 %)
3 diff
(99.9 %id)
DB447905 testis .c 1 to 427 1 to 427       427/427
(100 %)
3 diff
(99.3 %id)
DB020103 testis .c 2 to 566 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
AI652681 pooled germ cell tumors .c 1435 to 2016 581 to 1       581/581
(100 %)
2 diff
(99.7 %id)
DB335761 testis .c 1478 to 2013 537 to 1       537/537
(100 %)
1 diff
(99.9 %id)
AI962584 pooled germ cell tumors .c 1493 to 2016 523 to 1       523/523
(100 %)
1 diff
(99.9 %id)
AA954906 Kidney, kidney tumor .c 1515 to 2022 508 to 1       508/508
(100 %)
0 diff
(100 %id)
AA429606   .c 1547 to 2019 476 to 4       473/476
(99 %)
0 diff
(100 %id)
AA889152   .c 1549 to 2010 464 to 3       462/464
(99 %)
0 diff
(100 %id)
DB516535 testis .c 1565 to 2022 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
DB513072 testis .c 1586 to 2022 1 to 436     Submitted on the opposite strand 436/436
(100 %)
3 diff
(99.4 %id)
AA843473   .c 1634 to 2019 389 to 4       386/389
(99 %)
0 diff
(100 %id)
AI611061 pooled germ cell tumors .c 1647 to 2016 369 to 1       369/369
(100 %)
1 diff
(99.8 %id)
FN085595 breast carcinoma .c 1713 to 1808 1 to 95       95/95
(100 %)
1 diff
(99.0 %id)
FN075952 breast carcinoma .c 1987 to 2078 1 to 86       86/87
(98 %)
5 diff
(94.3 %id)
AK098832 testis .d 1 to 1601 1 to 1601 exact tiling clone, available from FLJ,   1601/1601
(100 %)
2 diff
(99.9 %id)
DQ104438   .e 1 to 1284 1 to 1284 I74F T210A S410P tiling clone,   1284/1284
(100 %)
3 diff
(99.8 %id)
TI_149300007   .f 1 to 901 980 to 92 Y2F I4M A5Q K6N L7N ... tiling clone, AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 892/951
(93 %)
20 diff
(97.9 %id)
BM976173 lung, Primary Lung Cystic Fibrosis EpithelialCells .f 165 to 901 755 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 737/737
(100 %)
1 diff
(99.9 %id)
AA430250   .g 1 to 327 1 to 327   tiling clone,   327/327
(100 %)
0 diff
(100 %id)
TI_149299956   .g 210 to 878 753 to 85   AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 669/669
(100 %)
2 diff
(99.8 %id)
BM976126 lung, Primary Lung Cystic Fibrosis EpithelialCells .g 231 to 878 664 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 648/648
(100 %)
2 diff
(99.7 %id)
AI149647   .g 389 to 882 494 to 1   tiling clone,   494/495
(99 %)
2 diff
(99.6 %id)
AA430041   .g 520 to 877 360 to 3   tiling clone,   358/360
(99 %)
7 diff
(98.1 %id)
CD106458 brain, Pituitary .h 1 to 858 1 to 859 L237F K238E R239K R240K V241G tiling clone,   859/859
(100 %)
1 diff
(99.9 %id)
AK128585 trachea .i 1 to 3712 2 to 3714 exact tiling clone, available from FLJ,   3714/3714
(100 %)
5 diff
(99.9 %id)
DB228878 trachea .i 1 to 587 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
H06783 whole brain .i 2094 to 2676 1 to 591   tiling clone,   591/593
(99 %)
31 diff
(94.8 %id)
BF999082 placenta_normal .i 3124 to 3298 1 to 174       174/174
(100 %)
4 diff
(97.8 %id)
DB349885 trachea .i 3149 to 3712 567 to 1       567/567
(100 %)
4 diff
(99.3 %id)
H06734 whole brain .i 3315 to 3720 419 to 1   tiling clone,   419/452
(92 %)
16 diff
(96.5 %id)
DB094082 testis .j 1 to 548 2 to 550   tiling clone, capped   549/549
(100 %)
2 diff
(99.7 %id)
DB095330 testis .j 48 to 602 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB063980 testis .j 50 to 604 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB096302 testis .j 58 to 597 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB229911 trachea .j 58 to 647 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DB225165 trachea .j 60 to 572 2 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
DB083583 testis .j 65 to 614 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA317026 hippocampus .j 66 to 614 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB028818 testis .j 66 to 625 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA325279 hippocampus .j 102 to 647 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB081687 testis .j 103 to 670 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DB442755 testis .j 118 to 578 1 to 463       463/465
(99 %)
7 diff
(98.5 %id)
DB458465 testis .j 118 to 588 1 to 471       471/471
(100 %)
4 diff
(99.2 %id)
BU154882 melanotic melanoma, skin .k 1 to 568 12 to 591 R40P N41E T42H V43R T44H ... tiling clone,   580/964
(60 %)
31 diff
(96.8 %id)
DB523964 testis .l 1 to 451 1 to 451 exact tiling clone, Submitted on the opposite strand 451/452
(99 %)
2 diff
(99.6 %id)
DB507649 testis .l 54 to 451 1 to 399   tiling clone, Submitted on the opposite strand 399/399
(100 %)
2 diff
(99.5 %id)
BI462787 testis .m 1 to 648 7 to 653 E83N E85T N86I F87L S88V ... tiling clone,   653/655
(99 %)
9 diff
(98.7 %id)
TI_149302871   .n-u 1 to 809 860 to 69 exact tiling clone, AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 792/967
(81 %)
59 diff
(93.9 %id)
BM980989 lung, Primary Lung Cystic Fibrosis EpithelialCells .n-u 255 to 809 569 to 15 exact tiling clone, AAA Possibly primed on the genome, locally A rich (20/24 A in genome downstream of last aligned base) 555/555
(100 %)
4 diff
(99.3 %id)
AW372558 breast .o-u 1 to 667 1 to 666 A7S L9P tiling clone,   666/667
(99 %)
14 diff
(98.0 %id)
DB203039 trachea .p 1 to 578 2 to 579 exact tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DB051545 testis .p 18 to 579 2 to 563 L32X R33S C34V L35P L36F ... tiling clone, capped   562/562
(100 %)
2 diff
(99.7 %id)
DB224689 trachea .q 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
T08896   .r-u 1 to 392 1 to 392 I53X tiling clone,   396/396
(100 %)
0 diff
(100 %id)
DB229906.
matches multiple genes
trachea Gene zuga, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene zuga    
DB229906.
matches multiple genes
trachea Gene NEK10, variant not shown       capped Suspected internal deletion, this clone was ignored, also hits gene zuga    
DB349947.
matches multiple genes
trachea Gene zuga, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene zuga    
DB349947.
matches multiple genes
trachea Gene NEK10, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene zuga    
BX537852 Liver Gene NEK10, variant not shown       available from DKFZ, AAA This clone was ignored    
CR743590 pooled Gene NEK10, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p, .q, .r-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C