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Gene ZFP3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
61 supporting clones for gene ZFP3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB072501 testis .a 1 to 546 2 to 548   tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
CR604942 adult brain .a 203 to 2205 1 to 2003 exact tiling clone,   2003/2003
(100 %)
0 diff
(100 %id)
BP379616 uterus .a 210 to 792 1 to 583       583/583
(100 %)
11 diff
(98.2 %id)
BP250703 hippocampus .a 211 to 792 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
NM_153018.2   .a 211 to 5204 1 to 4994 exact RefSeq, AAA   4994/4994
(100 %)
0 diff
(100 %id)
DA532981 brain .a 212 to 777 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BP349288 brain .a 212 to 793 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
AK290549 brain .a 219 to 2274 1 to 2054 A373G R404Q     2054/2054
(100 %)
3 diff
(99.9 %id)
BP249995 hippocampus .a 219 to 809 1 to 592       592/592
(100 %)
6 diff
(99.0 %id)
BP278526   .a 219 to 802 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA530968 brain .a 220 to 821 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DB097245 testis .a 220 to 807 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB164313 thymus .a 220 to 804 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DB249707 uterus .a 220 to 785 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BX444317 adult brain, brain .a 223 to 1262 20 to 1045   fully sequenced,   1026/1045
(98 %)
23 diff
(97.8 %id)
BC142962 Clones donated by RIKEN .a 232 to 3172 1 to 2942 exact tiling clone, AAA   2942/2942
(100 %)
3 diff
(99.9 %id)
DB463165 hippocampus .a 232 to 938 1 to 706       706/706
(100 %)
1 diff
(99.9 %id)
DB472400 hippocampus .a 232 to 922 1 to 685       685/687
(99 %)
9 diff
(98.7 %id)
DA381922 thalamus .a 233 to 687 2 to 457   capped   456/456
(100 %)
1 diff
(99.8 %id)
DA395078 thalamus .a 233 to 808 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BX647638 human skeletal muscle .a 258 to 5204 1 to 4942 exact tiling clone, available from DKFZ, AAA   4942/4942
(100 %)
12 diff
(99.8 %id)
CT000008 T-Lymphocytes .a 258 to 1169 1 to 912       912/915
(99 %)
3 diff
(99.7 %id)
DB181585 liver, tumor tissue .a 265 to 821 2 to 558   capped   557/558
(99 %)
1 diff
(99.9 %id)
AW802850 uterus .a 692 to 948 265 to 9       257/265
(96 %)
0 diff
(100 %id)
AK125731 testis .a 964 to 3175 1 to 2209   available from FLJ,   2209/2209
(100 %)
6 diff
(99.8 %id)
DB034073 testis .a 965 to 1520 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BX444316 adult brain, brain .a 1232 to 2205 965 to 1   fully sequenced,   965/965
(100 %)
16 diff
(98.4 %id)
BQ445956 Knee, Osteoarthritic Cartilage .a 1724 to 2233 526 to 19   AAA   508/511
(99 %)
5 diff
(99.1 %id)
AA018070 eye, retina .a 1931 to 2380 1 to 449       449/449
(100 %)
2 diff
(99.6 %id)
AI039570   .a 2025 to 2334 1 to 310     Submitted on the opposite strand 310/310
(100 %)
1 diff
(99.7 %id)
DB337285 testis .a 2640 to 3175 536 to 1       536/536
(100 %)
2 diff
(99.7 %id)
BX099730 liver and spleen .a 2645 to 3402 1 to 758   tiling clone,   758/758
(100 %)
3 diff
(99.7 %id)
H79541 liver and spleen .a 2645 to 2950 1 to 308       308/309
(99 %)
6 diff
(98.1 %id)
DB541157 hippocampus .a 2707 to 3172 1 to 466     Submitted on the opposite strand 466/466
(100 %)
1 diff
(99.8 %id)
DB528985 hippocampus .a 2709 to 3172 1 to 465     Submitted on the opposite strand 465/465
(100 %)
4 diff
(99.2 %id)
AA018406 eye, retina .a 2830 to 3185 372 to 16   AAA   357/357
(100 %)
1 diff
(99.8 %id)
BQ029732 lung, Metastatic Chondrosarcoma .a 2852 to 3185 352 to 19   AAA   334/334
(100 %)
1 diff
(99.8 %id)
AW298729   .a 2861 to 3267 428 to 22       407/428
(95 %)
0 diff
(100 %id)
BE737173 adenocarcinoma, Pancreas .a 3073 to 3857 12 to 792       781/914
(85 %)
26 diff
(97.2 %id)
BX415356 thymus .a 3075 to 3863 1 to 788       788/788
(100 %)
16 diff
(98.0 %id)
BX447351 thymus .a 3075 to 4050 1 to 974       974/1057
(92 %)
35 diff
(96.7 %id)
AA013006 eye, retina .a 3247 to 3651 1 to 419       419/419
(100 %)
19 diff
(95.5 %id)
BF826644 head_normal .a 3286 to 3438 171 to 18     Submitted on the opposite strand 154/176
(87 %)
0 diff
(100 %id)
H79542 liver and spleen .a 3392 to 3675 295 to 10       286/295
(96 %)
0 diff
(100 %id)
BQ016734 lung, Lung Focal Fibrosis .a 3619 to 4332 12 to 724   tiling clone, AAA Submitted on the opposite strand 713/724
(98 %)
6 diff
(99.2 %id)
DA343607 substantia nigra .a 3726 to 4281 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
CD515683 White Matter .a 3735 to 4527 26 to 820       795/930
(85 %)
11 diff
(98.9 %id)
BF816976 colon_ins .a 3790 to 4409 9 to 627       619/627
(98 %)
6 diff
(99.1 %id)
BF835197 head_neck .a 3831 to 4230 29 to 431       403/433
(93 %)
8 diff
(98.2 %id)
BF835416 head_neck .a 3831 to 4230 29 to 431       403/433
(93 %)
8 diff
(98.2 %id)
BG741878 skin .a 4036 to 4777 1 to 742       742/742
(100 %)
2 diff
(99.8 %id)
BQ941297 sciatic nerve .a 4194 to 5109 1 to 923   tiling clone,   923/949
(97 %)
16 diff
(98.4 %id)
AA490404 germinal center B cell .a 4473 to 4851 1 to 380       380/380
(100 %)
2 diff
(99.5 %id)
BX094152 multiple sclerosis lesions .a 4509 to 5204 1 to 694   AAA   694/694
(100 %)
1 diff
(99.9 %id)
AA845646 parathyroid gland, parathyroid tumor .a 4688 to 5205 523 to 6       518/523
(99 %)
0 diff
(100 %id)
N63611 multiple sclerosis lesions .a 4691 to 5204 513 to 1       513/513
(100 %)
5 diff
(99.1 %id)
AA012921 eye, retina .a 4706 to 5210 515 to 5   tiling clone,   511/515
(99 %)
0 diff
(100 %id)
AA873161 2 pooled tumors (clear cell type), Kidney .a 4728 to 5205 481 to 5       477/481
(99 %)
0 diff
(100 %id)
AI864668 pooled .a 4823 to 5210 392 to 6       387/392
(98 %)
0 diff
(100 %id)
AA746390 germinal center B cell .a 4845 to 5036 193 to 1       193/193
(100 %)
3 diff
(98.5 %id)
AI382541 anaplastic oligodendroglioma, brain .a 4893 to 5204 312 to 1       312/312
(100 %)
0 diff
(100 %id)
AI383230 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4902 to 5201 304 to 4       301/304
(99 %)
0 diff
(100 %id)
DB310184 substantia nigra .a 5209 to 5751 543 to 1   tiling clone,   543/544
(99 %)
0 diff
(100 %id)
AI632948 carcinoid, lung .a 5388 to 5749 362 to 1       362/362
(100 %)
1 diff
(99.8 %id)
BF511542   .a 5536 to 5751 231 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 216/216
(100 %)
1 diff
(99.6 %id)
DB316372 brain Gene ZFP3, variant not shown         Suspected internal deletion, this clone was ignored    
DA512336 brain Gene ZFP3, variant not shown       capped Suspected internal deletion, this clone was ignored    
AK055288 brain Gene ZFP3, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes C