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Gene RANBP3LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
53 supporting clones for gene RANBP3L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA413755 thalamus .a 1 to 528 2 to 530   tiling clone, capped   529/529
(100 %)
1 diff
(99.9 %id)
DA247296 brain .a 9 to 590 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
TI_44167576   .a 27 to 783 120 to 877       758/877
(86 %)
7 diff
(99.3 %id)
NM_001161429.1   .a 27 to 2643 1 to 2617 exact RefSeq, AAA   2617/2617
(100 %)
0 diff
(100 %id)
BG699548 brain, hippocampus .a 29 to 610 1 to 582       582/633
(91 %)
4 diff
(99.4 %id)
BI546897 brain, hippocampus .a 29 to 783 1 to 756   tiling clone,   756/756
(100 %)
7 diff
(99.1 %id)
BP198975 brain .a 34 to 610 1 to 576       576/582
(98 %)
4 diff
(99.4 %id)
DA294987 hippocampus .a 35 to 598 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA396934 thalamus .a 35 to 621 2 to 588   capped   587/593
(98 %)
7 diff
(98.9 %id)
BP369917 testis .a 35 to 439 1 to 406       406/578
(70 %)
13 diff
(97.8 %id)
AK302947 testis .a 36 to 2313 1 to 2278 T70R Q206R tiling clone,   2278/2278
(100 %)
2 diff
(100.0 %id)
BP200729 amygdala .a 36 to 610 1 to 575       575/581
(98 %)
3 diff
(99.5 %id)
BP219465 caudate nucleus .a 36 to 610 1 to 575       575/582
(98 %)
2 diff
(99.7 %id)
DB449305 testis .a 36 to 455 1 to 420       420/420
(100 %)
2 diff
(99.6 %id)
BF366785 nervous_tumor .a 37 to 378 21 to 360       340/361
(94 %)
10 diff
(97.3 %id)
DB491612 hypothalamus .a 37 to 382 1 to 346       346/346
(100 %)
6 diff
(98.3 %id)
BG400002 Kidney .a 37 to 667 1 to 626   available from MGC,   626/908
(68 %)
13 diff
(98.6 %id)
DA809613 brain .a 37 to 609 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DB093794 testis .a 37 to 584 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA150932 amygdala .a 38 to 610 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA254737 caudate nucleus .a 38 to 540 2 to 504   capped   503/503
(100 %)
3 diff
(99.5 %id)
DA339629 hippocampus .a 38 to 608 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA853688 placenta .a 38 to 602 2 to 566   capped   565/566
(99 %)
1 diff
(99.9 %id)
BG723201 testis .a 39 to 718 8 to 680       673/680
(98 %)
8 diff
(98.9 %id)
DA190838 amygdala .a 40 to 318 2 to 280   capped   279/279
(100 %)
0 diff
(100 %id)
DA162467 amygdala .a 44 to 610 2 to 569   capped   568/571
(99 %)
2 diff
(99.7 %id)
DN994313 brain, whole brain .a 44 to 628 9 to 594       586/602
(97 %)
9 diff
(98.6 %id)
AL119068 amygdala .a 49 to 576 1 to 528       528/529
(99 %)
2 diff
(99.7 %id)
DA159791 amygdala .a 221 to 723 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
BF674230 Prostate .a 522 to 1153 1 to 636   tiling clone,   636/636
(100 %)
11 diff
(98.3 %id)
FN046862 breast carcinoma .a 1262 to 1318 1 to 57       57/58
(98 %)
1 diff
(98.3 %id)
BX115384 Prostate .a 2258 to 2749 1 to 492   tiling clone,   492/492
(100 %)
2 diff
(99.6 %id)
AV719658 corresponding non cancerous liver tissue .a 2625 to 3209 585 to 1   tiling clone, Submitted on the opposite strand 585/585
(100 %)
6 diff
(99.0 %id)
AI675431 Prostate .a 2675 to 3215 541 to 1   tiling clone,   541/541
(100 %)
2 diff
(99.7 %id)
DB514328 testis .a 2783 to 3207 1 to 429     Submitted on the opposite strand 429/431
(99 %)
7 diff
(98.4 %id)
AI783603 Kidney .a 2919 to 3212 298 to 5       294/298
(98 %)
0 diff
(100 %id)
NM_145000.3   .b 1 to 2542 1 to 2542 exact RefSeq, AAA   2542/2542
(100 %)
0 diff
(100 %id)
BC047660 Brain, hippocampus .b 8 to 2542 1 to 2535 T70R tiling clone, available from MGC, AAA   2535/2535
(100 %)
2 diff
(100.0 %id)
BI603512 brain, hypothalamus .b 13 to 839 8 to 847       836/894
(93 %)
38 diff
(95.8 %id)
TI_45210085   .b 13 to 839 91 to 930       836/977
(85 %)
38 diff
(96.2 %id)
BM544392 brain, hippocampus .b 86 to 973 138 to 1041       902/1071
(84 %)
40 diff
(96.3 %id)
AK058151 testis .c 1 to 1532 1 to 1532 T70R tiling clone, available from FLJ,   1532/1532
(100 %)
1 diff
(100.0 %id)
TI_153953652   .d 1 to 821 74 to 886 T8Q A9Q S10A T11L D12T ... tiling clone,   813/866
(93 %)
25 diff
(97.2 %id)
BQ774461 Chondrosarcoma Grade II, Left Pelvis .d 550 to 1093 562 to 19   tiling clone, AAA   544/544
(100 %)
0 diff
(100 %id)
FN139711 breast carcinoma .d 561 to 660 1 to 103       103/103
(100 %)
4 diff
(96.2 %id)
AI378293   .d 629 to 1084 462 to 7       456/462
(98 %)
0 diff
(100 %id)
DB562173 hypothalamus .d 646 to 1093 1 to 449     Submitted on the opposite strand 449/449
(100 %)
5 diff
(98.9 %id)
BU726680 eye, human retina .d 654 to 1090 455 to 19   AAA   437/437
(100 %)
1 diff
(99.8 %id)
CD106241 brain, Pituitary .e 1 to 853 1 to 857 T70R K71X R100* tiling clone,   857/868
(98 %)
9 diff
(99.0 %id)
DA172734 amygdala .f 1 to 572 2 to 573 V41X T70R V106G tiling clone, capped   572/572
(100 %)
2 diff
(99.7 %id)
BC017951 Kidney .g 1 to 935 1 to 934 Q13E tiling clone, available from MGC, AAA   934/934
(100 %)
2 diff
(99.8 %id)
BG431086 Kidney .h-u 1 to 719 1 to 714 Y7X tiling clone,   714/721
(99 %)
10 diff
(98.7 %id)
DB304189 brain Gene RANBP3L, variant not shown              
DA206019 brain Gene RANBP3L, variant not shown       capped      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C