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Gene CCDC67TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
46 supporting clones for gene CCDC67 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CD359936 testis .a 1 to 631 31 to 660   tiling clone,   630/1015
(62 %)
19 diff
(98.2 %id)
DB449834.
matches multiple genes
testis .a 33 to 481 1 to 449     also hits gene swaskoyby 449/449
(100 %)
2 diff
(99.6 %id)
NM_181645.3   .a 33 to 2696 1 to 2664 exact RefSeq, AAA   2664/2664
(100 %)
0 diff
(100 %id)
BG493028 lung, mucoepidermoid carcinoma .a 53 to 675 1 to 627   available from MGC,   627/628
(99 %)
17 diff
(97.3 %id)
BC017929 Lung, mucoepidermoid carcinoma .a 54 to 1354 1 to 1298   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1298/1302
(99 %)
9 diff
(99.4 %id)
EL733934 mixed .a 157 to 763 1 to 607       607/607
(100 %)
0 diff
(100 %id)
TI_1948156287   .a 161 to 900 139 to 878   fully sequenced,   740/878
(84 %)
7 diff
(99.3 %id)
TI_1948156415   .a 161 to 1066 125 to 1035   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 911/1179
(77 %)
23 diff
(98.1 %id)
TI_1948156586   .a 161 to 460 129 to 428   fully sequenced,   300/428
(70 %)
6 diff
(98.6 %id)
TI_1948156942   .a 161 to 1063 126 to 1032       907/1177
(77 %)
28 diff
(97.7 %id)
BU569834 testis .a 171 to 798 1 to 638       638/802
(79 %)
16 diff
(98.1 %id)
AK058122 testis .a 299 to 1946 1 to 1648   tiling clone, available from FLJ,   1648/1648
(100 %)
3 diff
(99.9 %id)
TI_1948156587   .a 399 to 1224 954 to 127   fully sequenced,   828/954
(86 %)
2 diff
(99.8 %id)
BU852933 testis .a 774 to 1445 684 to 1     Submitted on the opposite strand 684/788
(86 %)
15 diff
(98.1 %id)
TI_1948156288   .a 870 to 1224 481 to 127   fully sequenced,   355/481
(73 %)
0 diff
(100 %id)
TI_1948091836   .a 924 to 1947 137 to 1155   fully sequenced,   1019/1155
(88 %)
36 diff
(96.9 %id)
TI_1948091987   .a 924 to 1947 137 to 1158   fully sequenced,   1022/1158
(88 %)
35 diff
(97.0 %id)
TI_1948092144   .a 924 to 1946 134 to 1157   fully sequenced,   1024/1157
(88 %)
34 diff
(97.1 %id)
TI_1948092290   .a 924 to 1944 135 to 1152   fully sequenced,   1018/1152
(88 %)
31 diff
(97.4 %id)
CV024781 mixed .a 925 to 1441 1 to 518       518/518
(100 %)
8 diff
(98.5 %id)
TI_1948091837   .a 1428 to 1946 640 to 122   tiling clone, fully sequenced,   519/640
(81 %)
0 diff
(100 %id)
TI_1948091988   .a 1428 to 1946 644 to 126   fully sequenced,   519/644
(80 %)
0 diff
(100 %id)
TI_1948092145   .a 1428 to 1946 645 to 127   fully sequenced,   519/645
(80 %)
0 diff
(100 %id)
TI_1948092291   .a 1428 to 1946 641 to 123   fully sequenced,   519/641
(80 %)
0 diff
(100 %id)
AA844735   .a 1602 to 1933 332 to 1       332/332
(100 %)
0 diff
(100 %id)
AI199391 Prostate .a 1680 to 1941 262 to 1       262/262
(100 %)
0 diff
(100 %id)
AK127973 testis .b 1 to 1870 2 to 1871 D223N E440R Q504K tiling clone, available from FLJ,   1871/1871
(100 %)
6 diff
(99.7 %id)
DB027286 testis .b 1 to 568 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB336692 testis .b 1316 to 1870 557 to 1       557/557
(100 %)
5 diff
(99.2 %id)
BG722163 testis .c 1 to 685 1 to 684   tiling clone, available from MGC,   684/684
(100 %)
7 diff
(99.0 %id)
BC050325 testis .c 6 to 1660 1 to 1654 E364K R365* tiling clone, available from MGC, AAA   1654/1654
(100 %)
4 diff
(99.8 %id)
BG721858 testis .c 26 to 822 1 to 793       793/793
(100 %)
13 diff
(98.4 %id)
BI463928 testis .d 1 to 867 1 to 878   tiling clone,   878/890
(98 %)
31 diff
(96.6 %id)
BC031247 testis .d 6 to 1923 1 to 1918 exact tiling clone, available from MGC, AAA   1918/1918
(100 %)
1 diff
(100.0 %id)
BG217110   .d 998 to 1893 1 to 880       880/880
(100 %)
44 diff
(95.0 %id)
BF433973 carcinoid, lung .d 1398 to 1935 540 to 3       538/540
(99 %)
0 diff
(100 %id)
AA813464   .d 1467 to 1925 461 to 2       460/461
(99 %)
0 diff
(100 %id)
DB521021 testis .d 1472 to 1923 1 to 452     Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
CA314836 Human Lung Epithelial cells, lung .d 1489 to 1923 453 to 19   AAA   435/444
(97 %)
0 diff
(100 %id)
AI299894 carcinoid, lung .d 1523 to 1922 400 to 1       400/400
(100 %)
2 diff
(99.5 %id)
BX280457 testis .d 1534 to 1925 428 to 37     Submitted on the opposite strand 392/428
(91 %)
0 diff
(100 %id)
BX118528 carcinoid, lung .e 1 to 463 1 to 464 exact tiling clone,   464/464
(100 %)
1 diff
(99.8 %id)
AI701113 carcinoid, lung .e 213 to 765 560 to 8   tiling clone,   553/560
(98 %)
0 diff
(100 %id)
BE503843 carcinoid, lung .e 256 to 677 519 to 99       421/519
(81 %)
0 diff
(100 %id)
DB468218 hippocampus .f 1 to 431 1 to 430 L49C tiling clone,   430/430
(100 %)
3 diff
(99.4 %id)
AW293806   .g-u 1 to 493 1 to 493   tiling clone, Submitted on the opposite strand 493/493
(100 %)
4 diff
(99.2 %id)
AW748550 breast .g-u 159 to 370 12 to 224       213/224
(95 %)
6 diff
(97.4 %id)
AI682224 pooled .g-u 230 to 651 443 to 17       427/443
(96 %)
0 diff
(100 %id)
CR748947   .g-u 308 to 1026 1 to 721 exact tiling clone,   721/721
(100 %)
1 diff
(99.9 %id)
DB535447 hippocampus .h 1 to 439 1 to 440 exact tiling clone, Submitted on the opposite strand 440/440
(100 %)
1 diff
(99.8 %id)
BX103744   .i 1 to 396 16 to 409 G2T S3R A4R A5H A6E ... tiling clone, AAA   394/409
(96 %)
7 diff
(98.3 %id)
AI016815   .i 109 to 396 315 to 28   AAA   288/288
(100 %)
1 diff
(99.7 %id)
AI217872   .i 216 to 396 199 to 19   AAA   181/181
(100 %)
1 diff
(99.5 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI