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Gene C22orf46TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
110 supporting clones for gene C22orf46 back to top
cDNA accession
Links to the sequence		 Tissue

most 5' clones
in red		 Match
mRNA		 From bp
to bp
in mRNA		 From bp
to bp
in accs.		 Clone encodes
complete protein
(with AA variation)		 Features Anomalies
detected by
AceView		 Accession
match over
(% length)		 Base differences
relative to genome
(% identity)
BU584433 colon tumor .c 290 to 830 1 to 541 W43R tiling clone,   541/541
(100 %)		 1 diff
(99.9 %id)
BU584501 renal vein .a 2332 to 2951 1 to 619       619/619
(100 %)		 1 diff
(99.9 %id)
BU584666 brain .a 1276 to 1748 1 to 475       475/475
(100 %)		 3 diff
(99.4 %id)
BU584797 brain .a 1019 to 1647 630 to 3       628/630
(99 %)		 0 diff
(100 %id)
BU584859 brain .a 3358 to 3911 1 to 554       554/554
(100 %)		 4 diff
(99.3 %id)
AA248522   .b-u 750 to 1012 1 to 262       262/262
(100 %)		 6 diff
(97.8 %id)
AA348210 brain, hippocampus .b-u 1157 to 1587 1 to 429       429/431
(99 %)		 15 diff
(96.6 %id)
AA384853 thyroid gland .b-u 1223 to 1486 1 to 264       264/264
(100 %)		 0 diff
(100 %id)
BP198651 adrenal gland .a 3428 to 4009 1 to 582       582/582
(100 %)		 1 diff
(99.9 %id)
AI904646 breast .a 2442 to 2763 1 to 323       323/326
(99 %)		 2 diff
(99.4 %id)
AK027237 Human lung .a 3464 to 5349 1 to 1887   available from FLJ, AAA   1887/1887
(100 %)		 4 diff
(99.8 %id)
AK095008 hippocampus .a 1624 to 5350 1 to 3729   available from FLJ,   3729/3729
(100 %)		 5 diff
(99.9 %id)
AW841176 colon_normal .b-u 1329 to 1723 409 to 15       395/409
(96 %)		 0 diff
(100 %id)
BC007210 Eye, retinoblastoma .a 3382 to 5350 1 to 1969   tiling clone, available from MGC, AAA   1969/1969
(100 %)		 1 diff
(100.0 %id)
BE077313 breast .b-u 1148 to 1472 326 to 4     Submitted on the opposite strand 323/334
(96 %)		 0 diff
(100 %id)
BE179421 head_neck .a 2700 to 3093 9 to 402       394/402
(98 %)		 6 diff
(98.6 %id)
BE179494 head_neck .a 2700 to 3202 9 to 511       503/511
(98 %)		 6 diff
(98.9 %id)
BF736620 bladder_tumor .a 2858 to 3004 149 to 3     Submitted on the opposite strand 147/149
(98 %)		 0 diff
(100 %id)
BF809311 colon_ins .a 1540 to 1688 17 to 165       149/165
(90 %)		 6 diff
(96.4 %id)
BF841365 head_neck .b-u 1269 to 1413 144 to 1     Submitted on the opposite strand 144/144
(100 %)		 3 diff
(98.0 %id)
BF853211 lung_normal .a 1612 to 2157 1 to 547       547/554
(98 %)		 27 diff
(95.2 %id)
BF905668 marrow .a 1923 to 2354 447 to 13     Submitted on the opposite strand 435/447
(97 %)		 0 diff
(100 %id)
BF962327 nervous_normal .a 1378 to 1711 338 to 6       333/338
(98 %)		 0 diff
(100 %id)
BG897899 cartilage .a 3105 to 3671 49 to 615       567/615
(92 %)		 6 diff
(99.1 %id)
BG987098 head_neck .a 1323 to 1589 1 to 269       269/269
(100 %)		 3 diff
(98.9 %id)
BG992886 head_neck .a 1330 to 1589 3 to 266       264/266
(99 %)		 8 diff
(97.0 %id)
BI060079 uterus_tumor .a 2685 to 3032 348 to 1       348/348
(100 %)		 0 diff
(100 %id)
BI062000 uterus_tumor .a 1827 to 2111 285 to 1       285/285
(100 %)		 0 diff
(100 %id)
DA176992 amygdala .a 3377 to 3708 2 to 333   capped   332/332
(100 %)		 0 diff
(100 %id)
DA267241 caudate nucleus .a 2976 to 3549 2 to 575   capped   574/574
(100 %)		 1 diff
(99.9 %id)
DA300114 hippocampus .a 1625 to 2206 2 to 583   capped   582/582
(100 %)		 0 diff
(100 %id)
DB307989 hippocampus .a 4801 to 5350 551 to 1       551/551
(100 %)		 1 diff
(99.9 %id)
DA390623 thalamus .a 1967 to 2457 2 to 496   capped   495/498
(99 %)		 5 diff
(99.0 %id)
BX281640 melanotic melanoma, skin .b-u 367 to 862 1 to 496       496/496
(100 %)		 0 diff
(100 %id)
CN259916 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3358 to 3813 1 to 455       455/455
(100 %)		 3 diff
(99.4 %id)
DA437180 tongue, tumor tissue .c 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)		 0 diff
(100 %id)
CV027096 mixed .b-u 281 to 898 1 to 618       618/620
(99 %)		 1 diff
(99.9 %id)
CV372520 lung_tumor .a 1595 to 1824 232 to 3     Submitted on the opposite strand 230/232
(99 %)		 0 diff
(100 %id)
BX486924   .a 2192 to 2665 1 to 474       474/474
(100 %)		 0 diff
(100 %id)
BX472407   .a 1421 to 1650 1 to 228       228/228
(100 %)		 11 diff
(95.2 %id)
DW466250 Liver .c 19 to 359 14 to 353       340/353
(96 %)		 6 diff
(98.4 %id)
EC457244 Prostate .b-u 1445 to 1548 1 to 104       104/104
(100 %)		 0 diff
(100 %id)
EC486267 Prostate .a 1475 to 1585 1 to 115       115/115
(100 %)		 5 diff
(95.7 %id)
EC553042 Prostate .a 1056 to 1149 94 to 1       94/94
(100 %)		 0 diff
(100 %id)
BP395388 pancreatic islet .b-u 1636 to 1866 1 to 231     Submitted on the opposite strand 231/238
(97 %)		 1 diff
(99.6 %id)
R17336 whole brain .b-u 49 to 469 1 to 428       428/431
(99 %)		 13 diff
(97.0 %id)
H08196 whole brain .b-u 1551 to 1867 330 to 11   AAA   320/325
(98 %)		 4 diff
(98.8 %id)
H08294 whole brain .b-u 49 to 446 1 to 400       400/400
(100 %)		 4 diff
(99.0 %id)
N42645 melanocyte .b-u 388 to 827 1 to 442       442/451
(98 %)		 4 diff
(99.2 %id)
N66693 multiple sclerosis lesions .b-u 1704 to 1865 162 to 1       162/162
(100 %)		 0 diff
(100 %id)
N98960 multiple sclerosis lesions .b-u 1057 to 1223 1 to 167       167/167
(100 %)		 0 diff
(100 %id)
W88832 liver and spleen .b-u 1219 to 1494 1 to 282   fully sequenced,   282/282
(100 %)		 4 diff
(98.6 %id)
W88833 liver and spleen .b-u 1464 to 1867 404 to 1   fully sequenced,   404/404
(100 %)		 2 diff
(99.6 %id)
AI290059 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b-u 1669 to 1866 218 to 21   AAA   198/198
(100 %)		 4 diff
(98.0 %id)
AI492230 B-cell, chronic lymphotic leukemia .b-u 1373 to 1865 505 to 13       493/505
(97 %)		 0 diff
(100 %id)
AI948811 Kidney .b-u 1411 to 1866 464 to 9       456/464
(98 %)		 0 diff
(100 %id)
AW300862 colon, moderately differentiated adenocarcinoma .b-u 1199 to 1867 686 to 20   AAA   667/667
(100 %)		 18 diff
(97.4 %id)
AW135829   .b-u 1670 to 1867 216 to 18   AAA   199/200
(99 %)		 3 diff
(98.5 %id)
AW136743   .b-u 1535 to 1867 350 to 18   AAA   333/333
(100 %)		 0 diff
(100 %id)
AW342094 carcinoid, lung .b-u 1659 to 1866 208 to 1       208/208
(100 %)		 1 diff
(99.6 %id)
AW592555 pooled .b-u 1479 to 1864 386 to 1       386/386
(100 %)		 4 diff
(99.0 %id)
BF941186 dorsal root ganglia .a 1740 to 1968 229 to 1       229/229
(100 %)		 0 diff
(100 %id)
BE258569 eye, retinoblastoma .a 3402 to 4044 1 to 630       630/640
(98 %)		 23 diff
(96.5 %id)
BE544876 cervical carcinoma cell line, cervix .b-u 1341 to 1867 1 to 528       528/623
(84 %)		 4 diff
(99.4 %id)
BE389483 endometrium, adenocarcinoma cell line, uterus .a 784 to 1264 34 to 518       485/520
(93 %)		 11 diff
(97.9 %id)
BE389349 endometrium, adenocarcinoma cell line, uterus .b-u 924 to 1612 1 to 687   tiling clone,   687/714
(96 %)		 20 diff
(97.2 %id)
BE903371 choriocarcinoma, placenta .b-u 841 to 1479 15 to 649       635/649
(97 %)		 6 diff
(99.1 %id)
BF982287 duodenal adenocarcinoma, cell line, small intestine .a 2526 to 3313 1 to 799       799/895
(89 %)		 31 diff
(96.6 %id)
BG287269 bladder, transitional cell papilloma, cell line .b-u 1356 to 1848 1 to 513       513/1113
(46 %)		 7 diff
(99.4 %id)
BG259247 embryonal carcinoma, cell line, testis .c 40 to 817 1 to 765       765/947
(80 %)		 32 diff
(96.7 %id)
BG285053 adenocarcinoma, cell line, Prostate .b-u 451 to 890 11 to 450       440/450
(97 %)		 6 diff
(98.7 %id)
BG676539 skin, squamous cell carcinoma .a 3361 to 4144 1 to 781       781/781
(100 %)		 7 diff
(99.2 %id)
BC035403 testis .a 377 to 5351 1 to 4976 exact tiling clone, available from MGC, AAA   4976/4976
(100 %)		 1 diff
(100.0 %id)
BG720137 testis .a 372 to 1064 1 to 693   available from MGC,   693/693
(100 %)		 8 diff
(98.9 %id)
BG759633 B-cells, primary B-cells from tonsils (cell line) .a 1 to 405 1 to 404   tiling clone,   404/855
(47 %)		 7 diff
(99.2 %id)
BI859802 breast, mammary adenocarcinoma, cell line .b-u 1196 to 1868 1 to 674       674/957
(70 %)		 5 diff
(99.5 %id)
BM806584 melanotic melanoma, skin .a 2746 to 3485 1 to 749       749/952
(78 %)		 20 diff
(97.9 %id)
BQ218780 leiomyosarcoma, uterus .a 2975 to 3936 1 to 967       967/973
(99 %)		 44 diff
(95.5 %id)
BQ005198 Chondrosarcoma, Left Pelvis .b-u 1412 to 1865 471 to 19   AAA   453/453
(100 %)		 1 diff
(99.8 %id)
BQ441631 melanotic melanoma, skin .b-u 1367 to 1868 36 to 537   tiling clone, AAA   502/537
(93 %)		 6 diff
(98.9 %id)
BQ226586 melanotic melanoma, skin .b-u 368 to 1251 1 to 893       893/901
(99 %)		 19 diff
(97.9 %id)
BU160280 melanotic melanoma, skin .a 811 to 1680 1 to 877       877/881
(99 %)		 20 diff
(97.8 %id)
BU167273 melanotic melanoma, skin .a 3317 to 3911 1 to 596       596/886
(67 %)		 18 diff
(98.0 %id)
BQ894190 dorsal root ganglia .c 19 to 616 11 to 618   tiling clone,   608/868
(70 %)		 26 diff
(97.1 %id)
CD519125 White Matter .b-u 393 to 1185 1 to 800       800/816
(98 %)		 12 diff
(98.6 %id)
CD558924 White Matter .b-u 393 to 1164 1 to 780   tiling clone,   780/793
(98 %)		 10 diff
(98.8 %id)
CO404462 Chondrosarcoma Lung Metastasis cell lines, lung .a 2431 to 3168 1 to 723       723/858
(84 %)		 17 diff
(98.1 %id)
TI_57188874   .b-u 1196 to 1868 49 to 722       674/957
(70 %)		 5 diff
(99.5 %id)
DA625722 Kidney .a 3031 to 3580 2 to 551   capped   550/550
(100 %)		 2 diff
(99.7 %id)
CB158387 Liver .b-u 334 to 862 1 to 529       529/529
(100 %)		 1 diff
(99.9 %id)
BP293768 lung .a 3464 to 4045 1 to 582       582/582
(100 %)		 2 diff
(99.7 %id)
BP293976 lung .a 3464 to 4045 1 to 582       582/582
(100 %)		 0 diff
(100 %id)
NM_001142964.1   .a 377 to 5351 1 to 4975 exact RefSeq, AAA   4975/4975
(100 %)		 0 diff
(100 %id)
DA730620   .b-u 1 to 739 2 to 738   tiling clone, capped   737/737
(100 %)		 4 diff
(99.5 %id)
DB362525   .b-u 1342 to 1866 525 to 1       525/531
(98 %)		 15 diff
(97.2 %id)
CV571444 cornea, eye .a 3077 to 3602 1 to 525       525/525
(100 %)		 4 diff
(99.3 %id)
CR977752 T-Lymphocytes .a 2756 to 3532 1 to 780       780/780
(100 %)		 3 diff
(99.7 %id)
CR991371 T-Lymphocytes .a 1861 to 2668 1 to 809       809/809
(100 %)		 2 diff
(99.8 %id)
TI_1948085234   .b-u 403 to 984 707 to 124       584/1404
(41 %)		 0 diff
(100 %id)
BP345905 synovial membrane .a 3178 to 3747 1 to 571       571/579
(98 %)		 8 diff
(98.7 %id)
DB070063 testis .a 586 to 1071 2 to 489   capped   488/488
(100 %)		 2 diff
(99.6 %id)
DB070735 testis .a 402 to 836 2 to 436   capped   435/435
(100 %)		 2 diff
(99.6 %id)
DB340155 testis .a 4801 to 5350 550 to 1       550/550
(100 %)		 3 diff
(99.5 %id)
DB157577 thymus .a 1623 to 2228 2 to 606   capped   605/605
(100 %)		 1 diff
(99.9 %id)
BM709877 eye, optic nerve .b-u 689 to 1266 1 to 578       578/578
(100 %)		 3 diff
(99.5 %id)
BU632417 cell lines, Chondrosarcoma .b-u 1233 to 1866 652 to 19   AAA   634/634
(100 %)		 5 diff
(99.3 %id)
BU584839 brain .a 3317 to 3911 1 to 596     Suspected internal deletion, this clone was ignored 596/886
(67 %)		 18 diff
(98.0 %id)
BU585021 submandibular gland .c 19 to 616 11 to 618   tiling clone, Suspected internal deletion, this clone was ignored 608/868
(70 %)		 26 diff
(97.1 %id)
AK131457 testis .b-u 393 to 1185 1 to 800   available from FLJ, Suspected internal deletion, this clone was ignored 800/816
(98 %)		 12 diff
(98.6 %id)
DA499961 brain .b-u 393 to 1164 1 to 780   tiling clone, capped This clone was ignored 780/793
(98 %)		 10 diff
(98.8 %id)
BY797620 eye .a 2431 to 3168 1 to 723     Suspected internal deletion, this clone was ignored 723/858
(84 %)		 17 diff
(98.1 %id)
AI126649   .a 2431 to 3168 1 to 723     Suspected internal deletion, this clone was ignored 723/858
(84 %)		 17 diff
(98.1 %id)
AI766137 Kidney .b-u 1196 to 1868 49 to 722     Suspected internal deletion, this clone was ignored 674/957
(70 %)		 5 diff
(99.5 %id)
BG258890 embryonal carcinoma, cell line, testis .a 3031 to 3580 2 to 551     Suspected internal deletion, this clone was ignored 550/550
(100 %)		 2 diff
(99.7 %id)
BQ182168 Knee, Osteoarthritic Cartilage .b-u 334 to 862 1 to 529   AAA Suspected internal deletion, this clone was ignored 529/529
(100 %)		 1 diff
(99.9 %id)
BU156065 melanotic melanoma, skin .a 3464 to 4045 1 to 582     This clone was ignored 582/582
(100 %)		 2 diff
(99.7 %id)
BP293976 lung .a 3464 to 4045 1 to 582       582/582
(100 %)		 0 diff
(100 %id)
NM_001142964.1   .a 377 to 5351 1 to 4975 exact RefSeq, AAA   4975/4975
(100 %)		 0 diff
(100 %id)
DA730620   .b-u 1 to 739 2 to 738   tiling clone, capped   737/737
(100 %)		 4 diff
(99.5 %id)
DB362525   .b-u 1342 to 1866 525 to 1       525/531
(98 %)		 15 diff
(97.2 %id)
CV571444 cornea, eye .a 3077 to 3602 1 to 525       525/525
(100 %)		 4 diff
(99.3 %id)
CV571444 cornea, eye .a 3077 to 3602 1 to 525       525/525
(100 %)		 4 diff
(99.3 %id)
CR977752 T-Lymphocytes .a 2756 to 3532 1 to 780       780/780
(100 %)		 3 diff
(99.7 %id)
CR991371 T-Lymphocytes .a 1861 to 2668 1 to 809       809/809
(100 %)		 2 diff
(99.8 %id)
TI_1948085234   .b-u 403 to 984 707 to 124       584/1404
(41 %)		 0 diff
(100 %id)
BP345905 synovial membrane .a 3178 to 3747 1 to 571       571/579
(98 %)		 8 diff
(98.7 %id)
DB070063 testis .a 586 to 1071 2 to 489   capped   488/488
(100 %)		 2 diff
(99.6 %id)
DB070735 testis .a 402 to 836 2 to 436   capped   435/435
(100 %)		 2 diff
(99.6 %id)
DB340155 testis .a 4801 to 5350 550 to 1       550/550
(100 %)		 3 diff
(99.5 %id)
DB157577 thymus .a 1623 to 2228 2 to 606   capped   605/605
(100 %)		 1 diff
(99.9 %id)
BM709877 eye, optic nerve .b-u 689 to 1266 1 to 578       578/578
(100 %)		 3 diff
(99.5 %id)
BM709877 eye, optic nerve .b-u 689 to 1266 1 to 578       578/578
(100 %)		 3 diff
(99.5 %id)
BU632417 cell lines, Chondrosarcoma .b-u 1233 to 1866 652 to 19   AAA   634/634
(100 %)		 5 diff
(99.3 %id)
BU632417 cell lines, Chondrosarcoma .b-u 1233 to 1866 652 to 19   AAA   634/634
(100 %)		 5 diff
(99.3 %id)
? Gene Summary Gene on genome mRNA:.a, .b-u, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes