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Gene MFSD7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
75 supporting clones for gene MFSD7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA109725 cerebellum .a 1 to 450 2 to 450   tiling clone, capped   449/449
(100 %)
3 diff
(99.4 %id)
BX358094 Placenta Cot 25-normalized .a 27 to 1059 1 to 1020       1020/1020
(100 %)
15 diff
(98.6 %id)
DB248330 uterus .a 92 to 410 2 to 320   capped   319/319
(100 %)
1 diff
(99.7 %id)
BI912271 leukocyte .a 277 to 1077 1 to 803       805/827
(97 %)
33 diff
(96.1 %id)
TI_57235716   .a 277 to 1077 1 to 803       805/827
(97 %)
33 diff
(96.1 %id)
DA585218 lung .a 318 to 634 2 to 320   capped   319/323
(98 %)
3 diff
(99.1 %id)
AY358401   .a 325 to 2150 1 to 1826 exact tiling clone,   1826/1830
(99 %)
1 diff
(100.0 %id)
CV030412 mixed .a 341 to 957 1 to 618       618/618
(100 %)
1 diff
(99.9 %id)
TI_1948138821   .a 341 to 932 127 to 722       596/1323
(45 %)
22 diff
(98.4 %id)
BX358093 Placenta Cot 25-normalized .a 1102 to 2119 1020 to 1       1020/1040
(98 %)
54 diff
(94.9 %id)
TI_1948138823   .a 1172 to 2022 981 to 127       855/1153
(74 %)
19 diff
(98.4 %id)
AW190606 adenocarcinoma, Pancreas .a 1749 to 2155 419 to 12       408/419
(97 %)
0 diff
(100 %id)
W46214 senescent fibroblast .a 1762 to 2151 407 to 14   AAA   394/414
(95 %)
14 diff
(96.7 %id)
AW592664 pooled .a 1762 to 2151 400 to 11   AAA   390/395
(98 %)
2 diff
(99.5 %id)
AI681994 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1770 to 2157 392 to 5   tiling clone,   388/392
(98 %)
0 diff
(100 %id)
AI306684 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1784 to 2151 383 to 16   AAA   368/368
(100 %)
0 diff
(100 %id)
BX096336 ovarian tumor, ovary .a 1796 to 2034 1 to 239       239/239
(100 %)
0 diff
(100 %id)
AA464029 ovarian tumor, ovary .a 1796 to 2152 1 to 362   fully sequenced,   362/362
(100 %)
9 diff
(97.6 %id)
AA464121 ovarian tumor, ovary .a 1805 to 2151 9 to 354   fully sequenced, AAA   346/354
(97 %)
6 diff
(98.4 %id)
AI467848 pooled .a 1829 to 2152 325 to 3       323/325
(99 %)
0 diff
(100 %id)
BF589323 pooled .a 1829 to 2152 326 to 3       324/326
(99 %)
0 diff
(100 %id)
BE677867 pooled .a 1829 to 2152 326 to 3       324/326
(99 %)
0 diff
(100 %id)
AW051997 pooled .a 1839 to 2152 316 to 3       314/316
(99 %)
0 diff
(100 %id)
AA464737 ovarian tumor, ovary .a 1874 to 2154 281 to 1   fully sequenced,   281/281
(100 %)
5 diff
(98.3 %id)
AW136972   .a 1905 to 2152 256 to 9       248/256
(96 %)
0 diff
(100 %id)
BM545146 ovary (pool of 3) .a 1914 to 2151 1 to 238       238/309
(77 %)
1 diff
(99.7 %id)
AI340422 adenocarcinoma, breast .a 1950 to 2089 156 to 17       140/172
(81 %)
0 diff
(100 %id)
EC528924 Prostate .a 1953 to 2060 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
AI307892 adenocarcinoma, breast .a 1953 to 2089 147 to 11       137/147
(93 %)
0 diff
(100 %id)
AI307938 adenocarcinoma, breast .a 1953 to 2089 154 to 15       140/154
(90 %)
0 diff
(100 %id)
AI472993 adenocarcinoma, breast .a 1953 to 2089 151 to 15       137/151
(90 %)
0 diff
(100 %id)
AW301776 invasive adenocarcinoma, lung .a 1955 to 2089 163 to 29       135/164
(82 %)
0 diff
(100 %id)
AW274361 invasive adenocarcinoma, lung .a 1955 to 2089 152 to 18       135/153
(88 %)
0 diff
(100 %id)
AI224687 breast, normal epithelium .a 1973 to 2089 134 to 18       117/142
(82 %)
0 diff
(100 %id)
AA463986 ovarian tumor, ovary .a 1976 to 2154 179 to 1   fully sequenced,   179/179
(100 %)
2 diff
(98.9 %id)
AK292010 Spleen .b 1 to 2024 1 to 2025 exact tiling clone,   2025/2025
(100 %)
2 diff
(100.0 %id)
DA932463 Spleen .b 2 to 562 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BC030246 Blood, adult leukocytes .b 155 to 2019 1 to 1865 exact available from MGC, AAA   1865/1865
(100 %)
0 diff
(100 %id)
NM_032219.2   .b 155 to 2019 1 to 1865 exact RefSeq, AAA   1865/1865
(100 %)
0 diff
(100 %id)
BQ067154 pooled brain, lung, testis .b 197 to 1195 1 to 1019       1019/1097
(92 %)
31 diff
(97.2 %id)
TI_1948138822   .b 212 to 1126 126 to 1054       929/1291
(71 %)
32 diff
(97.6 %id)
CD672589 eye, Iris .b 230 to 743 1 to 514       514/514
(100 %)
0 diff
(100 %id)
BI762600 pooled colon, kidney, stomach .b 581 to 1473 1 to 904       900/914
(98 %)
44 diff
(95.2 %id)
TI_57150498   .b 581 to 1357 30 to 810       781/943
(82 %)
27 diff
(97.2 %id)
TI_154103364   .b 1269 to 2025 839 to 90   tiling clone, AAA   750/978
(76 %)
9 diff
(99.1 %id)
CK725033 Chondrosarcoma, Left Pubic Bone .b 1339 to 2025 705 to 19   AAA   687/687
(100 %)
0 diff
(100 %id)
AA284298 senescent fibroblast .b 1351 to 1958 1 to 605     Submitted on the opposite strand 605/605
(100 %)
8 diff
(98.7 %id)
TI_1948138824   .b 1354 to 1890 666 to 129       538/1446
(37 %)
11 diff
(99.3 %id)
CA427946 Bone, Subchondral Bone .b 1370 to 2019 669 to 19   AAA   651/651
(100 %)
2 diff
(99.7 %id)
CR600243 Placenta Cot 25-normalized .b 1491 to 2020 1 to 530       530/530
(100 %)
0 diff
(100 %id)
BX395790 Placenta Cot 25-normalized .b 1491 to 2020 1 to 529       529/529
(100 %)
1 diff
(99.9 %id)
CD672588 eye, Iris .b 1549 to 2019 487 to 17   AAA   471/471
(100 %)
0 diff
(100 %id)
DB332581 Spleen .b 1674 to 2024 352 to 1       352/352
(100 %)
3 diff
(99.2 %id)
DB038456 testis .c 1 to 564 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DB337635 testis .c 1267 to 1784 518 to 1   tiling clone,   518/519
(99 %)
0 diff
(100 %id)
CR626001 Placenta Cot 25-normalized .d 1 to 1556 1 to 1556 exact tiling clone,   1556/1556
(100 %)
0 diff
(100 %id)
AL572677 placenta, Placenta Cot 25-normalized .d 28 to 800 29 to 799   fully sequenced,   771/799
(96 %)
14 diff
(98.3 %id)
AL572656 placenta, Placenta Cot 25-normalized .d 739 to 1532 812 to 19   fully sequenced,   794/812
(97 %)
9 diff
(98.9 %id)
AK025922   .e 1 to 1600 1 to 1600 L122P P287L tiling clone, available from FLJ, AAA   1600/1600
(100 %)
4 diff
(99.8 %id)
BP253270 Kidney .e 1 to 583 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
CR609503 HeLa cells Cot 25-normalized .f 1 to 1632 1 to 1632 exact tiling clone,   1632/1632
(100 %)
0 diff
(100 %id)
BX401055   .f 1 to 921 1 to 918   fully sequenced,   918/918
(100 %)
3 diff
(99.7 %id)
BX384263   .f 880 to 1621 748 to 10   fully sequenced,   739/748
(98 %)
6 diff
(99.2 %id)
BQ005366 Chondrosarcoma, Left Pelvis .f 1026 to 1664 658 to 19   tiling clone, AAA   640/640
(100 %)
1 diff
(99.9 %id)
DB356674 whole embryo, mainly head .g 1 to 502 1 to 501   tiling clone, Submitted on the opposite strand 501/503
(99 %)
10 diff
(98.1 %id)
AI907931 breast .g 209 to 647 15 to 452   tiling clone,   438/452
(96 %)
3 diff
(99.4 %id)
AY203936   .g 443 to 1913 1 to 1471 exact tiling clone, AAA   1471/1471
(100 %)
1 diff
(100.0 %id)
BM563743 brain, medulla .h 1 to 937 21 to 965 L150P W151V E152G S153E V154C ... tiling clone,   945/1093
(86 %)
30 diff
(97.3 %id)
DT219510 brain .i 1 to 653 1 to 654 R210E L212A P213A Q214T A215G tiling clone,   654/654
(100 %)
1 diff
(99.9 %id)
BI755656 brain .j 1 to 513 1 to 513   tiling clone,   513/539
(95 %)
9 diff
(98.4 %id)
TI_57218544   .j 1 to 513 37 to 549       513/575
(89 %)
10 diff
(98.3 %id)
CD671671 eye, Iris .j 5 to 633 1 to 629   tiling clone,   633/633
(100 %)
0 diff
(100 %id)
TI_57176247   .k 1 to 491 52 to 545 A2S F18L V19F F20S L21C ... tiling clone,   494/740
(66 %)
11 diff
(98.6 %id)
BI829685 brain, medulla .k 5 to 478 1 to 476   tiling clone,   476/476
(100 %)
4 diff
(99.2 %id)
DB040873 testis .l-u 1 to 539 2 to 541 G5X D6G R7Q W8V L9A ... tiling clone, capped   540/540
(100 %)
1 diff
(99.9 %id)
DB058388 testis .l-u 51 to 484 2 to 435   capped   434/434
(100 %)
0 diff
(100 %id)
DB066508 testis .l-u 59 to 604 2 to 547 exact tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
DB063479 testis .l-u 66 to 597 2 to 533 exact capped   532/532
(100 %)
0 diff
(100 %id)
DB077470 testis .l-u 66 to 583 2 to 520 L124F E125G P126A P127A S128L ... capped   519/519
(100 %)
1 diff
(99.9 %id)
DB065194 testis .l-u 75 to 537 2 to 464 exact capped   463/465
(99 %)
1 diff
(99.8 %id)
DB072149 testis .m-u 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
DB517840.
matches multiple genes
testis Gene MYL5, variant not shown         This clone was ignored, also hits gene MYL5    
DB517840.
matches multiple genes
testis Gene MFSD7, variant not shown         This clone was ignored, also hits gene MYL5    
DB452281.
matches multiple genes
testis Gene MYL5, variant not shown         This clone was ignored, also hits gene MYL5    
DB452281.
matches multiple genes
testis Gene MFSD7, variant not shown         This clone was ignored, also hits gene MYL5    
DB070895 testis Gene MFSD7, variant not shown       capped This clone was ignored    
DB340165 testis Gene MFSD7, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C