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Gene QSER1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
266 supporting clones for gene QSER1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC112935 Uterus, leiomyosarcoma .a 1 to 5429 1 to 5429   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 5429/5432
(99 %)
8 diff
(99.9 %id)
BQ962234 leiomyosarcoma, uterus .a 2 to 808 1 to 812       812/922
(88 %)
13 diff
(98.6 %id)
CA951123 Pancreas, Purified pancreatic islet .a 49 to 157 1 to 109       109/122
(89 %)
1 diff
(99.2 %id)
BI036442 nervous_tumor .a 69 to 439 374 to 6       372/375
(99 %)
0 diff
(100 %id)
NM_001076786.1   .a 69 to 9339 1 to 9271   RefSeq,   9271/9271
(100 %)
0 diff
(100 %id)
AA053856 eye, retina .a 156 to 679 74 to 591       518/626
(82 %)
16 diff
(97.5 %id)
CN288971 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 336 to 885 1 to 550       550/550
(100 %)
0 diff
(100 %id)
AK125391 brain .a 579 to 4108 1 to 3530   available from FLJ,   3530/3531
(99 %)
8 diff
(99.8 %id)
DA776296 brain .a 580 to 1154 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BQ933529 sciatic nerve .a 605 to 1509 24 to 935       912/935
(97 %)
6 diff
(99.4 %id)
R21298 whole brain .a 700 to 1054 1 to 362       362/472
(76 %)
9 diff
(98.1 %id)
H15324 whole brain .a 700 to 1185 1 to 501       501/509
(98 %)
24 diff
(95.3 %id)
H15325 whole brain .a 700 to 1110 1 to 416       416/420
(99 %)
11 diff
(97.4 %id)
BQ272039 Pancreas, Purified pancreatic islet .a 837 to 1403 1 to 567       567/567
(100 %)
0 diff
(100 %id)
CK825583 Pancreas, Purified pancreatic islet .a 867 to 1408 1 to 542     Submitted on the opposite strand 542/542
(100 %)
3 diff
(99.5 %id)
AL834141 testis .a 1306 to 6071 1 to 4767   available from DKFZ, AAA   4767/4767
(100 %)
5 diff
(99.9 %id)
DA886831   .a 1316 to 1871 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BM010898 brain, neuroblastoma, cell line .a 1346 to 2235 1 to 905       905/927
(97 %)
57 diff
(93.9 %id)
TI_59379783   .a 1347 to 2235 104 to 1007       904/926
(97 %)
57 diff
(93.9 %id)
AW976250   .a 1370 to 1868 1 to 499       499/501
(99 %)
14 diff
(97.3 %id)
AA484980 germinal center B cell .a 1437 to 1742 1 to 304       304/304
(100 %)
4 diff
(98.7 %id)
AW976188   .a 1585 to 2220 637 to 1     Submitted on the opposite strand 637/638
(99 %)
9 diff
(98.6 %id)
BQ271716 Pancreas, Purified pancreatic islet .a 1645 to 2220 576 to 1       576/576
(100 %)
0 diff
(100 %id)
BM263943 Pancreas, Purified pancreatic islet .a 1673 to 2220 548 to 1       548/548
(100 %)
0 diff
(100 %id)
BM353528 Pancreas, Purified pancreatic islet .a 1686 to 2220 535 to 1       535/535
(100 %)
1 diff
(99.9 %id)
AW195525 Kidney .a 1687 to 2221 536 to 1       536/536
(100 %)
10 diff
(98.2 %id)
BF114942 Kidney .a 1689 to 2221 533 to 1       533/533
(100 %)
2 diff
(99.7 %id)
AA642350 germinal center B cell .a 1707 to 2228 524 to 3       522/524
(99 %)
0 diff
(100 %id)
AA642342 germinal center B cell .a 1713 to 2228 518 to 3       516/518
(99 %)
0 diff
(100 %id)
AW090520 brain, tumor, 5 pooled (see description) .a 1741 to 2014 274 to 1       274/274
(100 %)
0 diff
(100 %id)
BX096091 whole brain .a 1742 to 2228 494 to 8   AAA Submitted on the opposite strand 487/494
(98 %)
0 diff
(100 %id)
FN131050 breast carcinoma .a 1743 to 1844 99 to 1     Submitted on the opposite strand 99/99
(100 %)
4 diff
(96.0 %id)
AI381640 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1758 to 2221 464 to 1       464/464
(100 %)
0 diff
(100 %id)
AA748708 germinal center B cell .a 1801 to 2203 402 to 1       402/402
(100 %)
6 diff
(98.6 %id)
AA054228 eye, retina .a 1805 to 2222 422 to 1       422/422
(100 %)
7 diff
(98.4 %id)
AW015318   .a 1811 to 2235 428 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 425/428
(99 %)
0 diff
(100 %id)
H15709 whole brain .a 1842 to 2207 371 to 3       369/376
(98 %)
0 diff
(100 %id)
AI361625 anaplastic oligodendroglioma, brain .a 1864 to 2221 358 to 1       358/358
(100 %)
0 diff
(100 %id)
AI915962 Kidney .a 1866 to 2221 355 to 1       355/355
(100 %)
1 diff
(99.8 %id)
R46144 whole brain .a 1877 to 2228 367 to 2       366/367
(99 %)
0 diff
(100 %id)
CN304228 embryonic stem cells, cell lines H1, H7, andH9 .a 1896 to 2602 1 to 707       707/707
(100 %)
0 diff
(100 %id)
AK123858 brain .a 1939 to 4828 1 to 2890   available from FLJ,   2890/2890
(100 %)
6 diff
(99.8 %id)
DA770933 brain .a 1940 to 2470 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA326562 hippocampus .a 2027 to 2692 2 to 667   capped   666/666
(100 %)
1 diff
(99.9 %id)
DB227692 trachea .a 2103 to 2665 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA113192 cerebellum .a 2319 to 2899 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
CN304227 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2384 to 3038 1 to 654       654/654
(100 %)
1 diff
(99.9 %id)
EH314489   .a 2394 to 2448 1 to 55       55/55
(100 %)
1 diff
(98.2 %id)
AK125902 testis .a 2453 to 6071 1 to 3619   tiling clone, available from FLJ,   3619/3619
(100 %)
3 diff
(100.0 %id)
DB069045 testis .a 2454 to 2991 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
CD654716 Embryonic Stem cells .a 2475 to 3251 1 to 768       768/798
(96 %)
6 diff
(99.3 %id)
CN304226 embryonic stem cells, cell lines H1, H7, andH9 .a 2491 to 3105 1 to 615       615/615
(100 %)
0 diff
(100 %id)
CV569523 cornea, eye .a 2508 to 3116 1 to 609       609/609
(100 %)
0 diff
(100 %id)
AI903739 breast .a 2574 to 2758 1 to 185       185/185
(100 %)
0 diff
(100 %id)
CV312013 ovary .a 2680 to 3024 13 to 359       347/359
(96 %)
6 diff
(98.4 %id)
L44446   .a 2807 to 3151 1 to 345       345/345
(100 %)
2 diff
(99.5 %id)
CA428919 Cell Line, Chondrosarcoma .a 2814 to 3076 10 to 272     Submitted on the opposite strand 263/272
(96 %)
6 diff
(97.8 %id)
CV571977 cornea, eye .a 2952 to 3251 1 to 300       300/300
(100 %)
13 diff
(95.7 %id)
BF816181 colon_ins .a 3042 to 3615 583 to 11     Submitted on the opposite strand 573/587
(97 %)
0 diff
(100 %id)
BC013746 Kidney, hypernephroma .a 3075 to 4122 1 to 1047   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1047/1050
(99 %)
5 diff
(99.6 %id)
BG164470 hypernephroma, cell line, Kidney .a 3076 to 3757 1 to 679   available from MGC,   679/927
(73 %)
10 diff
(99.0 %id)
BP234335 coronary artery .a 3080 to 3661 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
AI061251   .a 3124 to 3554 431 to 1   tiling clone,   431/431
(100 %)
0 diff
(100 %id)
BP238641 Liver .a 3274 to 3863 1 to 591       591/591
(100 %)
7 diff
(98.9 %id)
BG940938 blood .a 3285 to 3695 1 to 411       411/411
(100 %)
2 diff
(99.6 %id)
BX098985 liver and spleen .a 3344 to 4122 1 to 779   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 779/803
(97 %)
5 diff
(99.4 %id)
BX643085   .a 3362 to 3954 9 to 600       592/600
(98 %)
6 diff
(99.0 %id)
DN997410 breast cancer, Mammary gland (cancer tissue) .a 3381 to 4014 8 to 641       634/641
(98 %)
6 diff
(99.1 %id)
CN259427 embryonic stem cells, DMSO-treated H9 cellline .a 3389 to 4188 1 to 801       801/801
(100 %)
7 diff
(99.2 %id)
BG960164 colon .a 3395 to 3589 226 to 37       190/226
(84 %)
0 diff
(100 %id)
T06034   .a 3397 to 3688 293 to 1       293/293
(100 %)
2 diff
(99.4 %id)
DA451918 tongue, tumor tissue .a 3529 to 4117 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DB325997 brain .a 3556 to 4108 556 to 2       555/556
(99 %)
0 diff
(100 %id)
AI076404 liver and spleen .a 3687 to 4109 423 to 1       423/423
(100 %)
0 diff
(100 %id)
AA704431 liver and spleen .a 3709 to 4109 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
BQ326932 colon_normal .a 3825 to 3969 147 to 2       146/147
(99 %)
0 diff
(100 %id)
CN259429 embryonic stem cells, DMSO-treated H9 cellline .a 3831 to 4366 1 to 536       536/536
(100 %)
2 diff
(99.7 %id)
DA828663 placenta .a 3857 to 4614 2 to 764   capped   760/825
(92 %)
7 diff
(99.2 %id)
DB330452   .a 4283 to 4828 549 to 1       549/549
(100 %)
3 diff
(99.5 %id)
AA905517 pooled .a 4300 to 4838 539 to 1       539/539
(100 %)
0 diff
(100 %id)
DB325730 brain .a 4328 to 4822 504 to 7       498/504
(98 %)
1 diff
(99.9 %id)
AI149869   .a 4346 to 4841 496 to 1       496/496
(100 %)
0 diff
(100 %id)
DB214150 trachea .a 4613 to 5165 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB091022 testis .a 4623 to 5180 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
AA810522 germinal center B cell .a 4629 to 4844 220 to 4       217/220
(98 %)
1 diff
(99.6 %id)
AW364104 colon .a 4642 to 4888 6 to 250       245/250
(98 %)
6 diff
(97.6 %id)
CD632282   .a 4648 to 5219 8 to 582       575/594
(96 %)
15 diff
(97.5 %id)
CD632283   .a 4648 to 5219 570 to 7       564/577
(97 %)
13 diff
(97.8 %id)
BI821376 pooled brain, lung, testis .a 4758 to 5560 1 to 806       806/807
(99 %)
9 diff
(98.9 %id)
TI_57200525   .a 4758 to 5560 33 to 838       806/839
(96 %)
15 diff
(98.3 %id)
BE243663 leukopheresis .a 4843 to 5190 348 to 1       348/349
(99 %)
0 diff
(100 %id)
BF029385 bladder, carcinoma, cell line .a 4886 to 5442 1 to 549       552/857
(64 %)
26 diff
(97.0 %id)
BU160226 melanotic melanoma, skin .a 4946 to 5747 1 to 813       813/852
(95 %)
14 diff
(98.4 %id)
DA662304   .a 4997 to 5572 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
BQ222001 melanotic melanoma, skin .a 5055 to 5904 1 to 855       855/869
(98 %)
11 diff
(98.8 %id)
BI088976 cervix .a 5064 to 5858 13 to 809       797/892
(89 %)
15 diff
(98.4 %id)
AA127281 lung, lung carcinoma .a 5071 to 5284 1 to 216       216/216
(100 %)
2 diff
(99.1 %id)
BP235969 coronary artery .a 5077 to 5663 1 to 589       589/589
(100 %)
7 diff
(98.9 %id)
DA222221 brain .a 5087 to 5644 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BP335729 coronary artery .a 5193 to 5780 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
EH333935   .a 5195 to 5277 1 to 85       85/85
(100 %)
2 diff
(97.7 %id)
AA588648 adrenal adenoma, adrenal gland .a 5245 to 5630 1 to 387     Submitted on the opposite strand 387/387
(100 %)
5 diff
(98.8 %id)
BX643311   .a 5247 to 5916 1 to 673       673/673
(100 %)
2 diff
(99.8 %id)
CD653405 Embryonic Stem cells .a 5326 to 6088 1 to 758       758/852
(88 %)
14 diff
(98.4 %id)
DB216161 trachea .a 5384 to 5913 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
BX489426   .a 5445 to 6042 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
CN370402 embryonic stem cells, cell lines H1, H7, andH9 .a 5458 to 5858 1 to 400       400/400
(100 %)
1 diff
(99.8 %id)
DB373242 placenta .a 5464 to 6071 606 to 1       606/613
(98 %)
29 diff
(95.3 %id)
DB339989 testis .a 5515 to 6071 560 to 1       560/560
(100 %)
3 diff
(99.5 %id)
CN370404 embryonic stem cells, cell lines H1, H7, andH9 .a 5542 to 5680 1 to 138       138/138
(100 %)
2 diff
(98.6 %id)
AK055185 tongue, tumor tissue .a 5546 to 8415 1 to 2870   tiling clone, available from FLJ,   2870/2870
(100 %)
4 diff
(99.9 %id)
DA435086 tongue, tumor tissue .a 5547 to 6114 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA248930 brain .a 5634 to 6230 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
AI075772 liver and spleen .a 5642 to 6072 433 to 4       430/433
(99 %)
0 diff
(100 %id)
BG026723 Bone, osteosarcoma, cell line .a 5646 to 6361 9 to 723       715/918
(77 %)
31 diff
(96.7 %id)
CN370403 embryonic stem cells, cell lines H1, H7, andH9 .a 5683 to 5971 19 to 310       292/310
(94 %)
6 diff
(98.1 %id)
AA127280.
matches multiple genes
lung, lung carcinoma .a 5685 to 6072 392 to 2     also hits gene SLC25A38 391/397
(98 %)
0 diff
(100 %id)
AW469421 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5726 to 6012 287 to 1       287/287
(100 %)
0 diff
(100 %id)
AA453019   .a 5775 to 6072 300 to 3       298/300
(99 %)
0 diff
(100 %id)
AA764828 germinal center B cell .a 5788 to 6071 297 to 14   AAA   284/284
(100 %)
0 diff
(100 %id)
DB158740 thymus .a 5820 to 6416 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
CB218565 mandible, pooled .a 5848 to 6194 16 to 363     Submitted on the opposite strand 348/363
(95 %)
6 diff
(98.4 %id)
CB218566 mandible, pooled .a 5848 to 6194 348 to 1     Submitted on the opposite strand 348/363
(95 %)
8 diff
(97.8 %id)
EL595126 epidermis, skin .a 5916 to 6447 20 to 551       532/565
(94 %)
4 diff
(99.3 %id)
AL699927 human skeletal muscle .a 5926 to 6582 1 to 657   tiling clone,   657/657
(100 %)
0 diff
(100 %id)
EH348107   .a 5972 to 6048 1 to 77       77/77
(100 %)
0 diff
(100 %id)
DA447502 tongue, tumor tissue .a 5987 to 6564 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
CN292776 embryonic stem cells, DMSO-treated H9 cellline .a 5992 to 6490 1 to 500       500/500
(100 %)
2 diff
(99.6 %id)
DB214820 trachea .a 5999 to 6493 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA856157 placenta .a 6016 to 6587 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
AA525279 ovary .a 6091 to 6366 1 to 276       276/325
(84 %)
4 diff
(98.8 %id)
DA510657 brain .a 6139 to 6712 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DB161137 thymus .a 6141 to 6727 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA409250 thalamus .a 6172 to 6739 2 to 571   capped   570/570
(100 %)
4 diff
(99.3 %id)
DA736736   .a 6202 to 7042 2 to 848   capped   847/847
(100 %)
14 diff
(98.4 %id)
DA790117 brain .a 6308 to 6897 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BE535216 cervix .a 6384 to 7064 1 to 669       669/951
(70 %)
16 diff
(98.4 %id)
U51700 heart, normal gingiva .a 6390 to 6628 239 to 1       239/239
(100 %)
2 diff
(99.2 %id)
DA795333 brain .a 6417 to 6983 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA439268 tongue, tumor tissue .a 6423 to 6986 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA071318 cerebellum .a 6425 to 6987 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
AI904835 breast .a 6428 to 6886 42 to 500       459/500
(91 %)
6 diff
(98.8 %id)
DA449981 tongue, tumor tissue .a 6546 to 7122 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA830682 placenta .a 6546 to 7280 2 to 750   capped   749/826
(90 %)
24 diff
(97.1 %id)
BM479174 melanotic melanoma, skin .a 6605 to 7562 1 to 963       963/1046
(92 %)
30 diff
(97.2 %id)
BG616094 embryonal carcinoma, testis .a 6703 to 7288 1 to 596       596/817
(72 %)
21 diff
(97.5 %id)
CA397243 eye, RPE/choroid .a 6707 to 7336 1 to 631       631/631
(100 %)
2 diff
(99.7 %id)
BG029448 breast, mammary adenocarcinoma, cell line .a 6725 to 7274 88 to 636       549/950
(57 %)
6 diff
(99.4 %id)
DA177444 amygdala .a 6800 to 7345 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA833462 placenta .a 6835 to 7591 2 to 761   capped   760/769
(98 %)
9 diff
(98.9 %id)
BU189561 melanotic melanoma, skin .a 6915 to 7777 1 to 872       872/886
(98 %)
16 diff
(98.2 %id)
AK095528 brain .a 6925 to 9335 1 to 2411   tiling clone, available from FLJ,   2411/2411
(100 %)
2 diff
(100.0 %id)
DA483429 brain .a 6926 to 7814 2 to 887   capped   886/887
(99 %)
9 diff
(99.0 %id)
DA159720 amygdala .a 6935 to 7487 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA785694 brain .a 6938 to 7520 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BM455727 lymph, lymphoma, cell line .a 6940 to 7577 25 to 666       642/1126
(57 %)
6 diff
(99.5 %id)
DA520044 brain .a 6985 to 7544 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA500157 brain .a 6987 to 7558 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
R18974 whole brain .a 7027 to 7336 1 to 311       311/400
(77 %)
2 diff
(99.5 %id)
DA999986 breast, tumor tissue .a 7028 to 7573 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA554123   .a 7031 to 7594 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA751679   .a 7032 to 7579 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
BU170648 eye, retinoblastoma .a 7059 to 7984 1 to 925       925/925
(100 %)
9 diff
(99.1 %id)
CN371457 embryonic stem cells, cell lines H1, H7, andH9 .a 7060 to 7778 1 to 717       717/717
(100 %)
2 diff
(99.8 %id)
BU154784 melanotic melanoma, skin .a 7094 to 7917 1 to 833       833/904
(92 %)
18 diff
(98.1 %id)
DB257497 uterus .a 7094 to 7658 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB210473 trachea .a 7233 to 7806 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
BG108570 Bone, osteosarcoma, cell line .a 7347 to 7774 1 to 425       425/425
(100 %)
3 diff
(99.3 %id)
DA733466   .a 7350 to 8067 2 to 724   capped   723/723
(100 %)
10 diff
(98.7 %id)
BF795368 lymph, lymphoma, cell line .a 7367 to 7774 1 to 409       409/409
(100 %)
1 diff
(99.8 %id)
AA280094 germinal center B cell .a 7368 to 7860 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
CN371456 embryonic stem cells, DMSO-treated H9 cellline .a 7379 to 7626 1 to 248       248/248
(100 %)
0 diff
(100 %id)
BU195039 melanotic melanoma, skin .a 7469 to 8007 14 to 554       541/944
(57 %)
16 diff
(98.4 %id)
CB159064 Liver .a 7496 to 8112 1 to 617       617/617
(100 %)
0 diff
(100 %id)
BJ997868 Wilms tumor .a 7529 to 8128 1 to 600       600/600
(100 %)
0 diff
(100 %id)
BM718406 eye, fetal eye .a 7541 to 8198 1 to 658     Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 658/658
(100 %)
0 diff
(100 %id)
Z44768 brain, total brain .a 7645 to 7993 1 to 350       350/350
(100 %)
2 diff
(99.5 %id)
CA430087 cell lines, Chondrosarcoma .a 7658 to 8415 776 to 19   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 758/758
(100 %)
5 diff
(99.4 %id)
CA430191 cell lines, Chondrosarcoma .a 7784 to 8415 650 to 19   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 632/632
(100 %)
0 diff
(100 %id)
CD103025 Pooled-Skin .a 7789 to 8444 1 to 665       665/794
(83 %)
23 diff
(97.2 %id)
BG121009 adenocarcinoma, cell line, Liver .a 7863 to 8626 1 to 752       752/934
(80 %)
26 diff
(97.3 %id)
DB313335 tongue, tumor tissue .a 7883 to 8415 533 to 1       533/533
(100 %)
0 diff
(100 %id)
R19330 whole brain .a 7894 to 8213 1 to 329     Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 329/359
(91 %)
15 diff
(95.9 %id)
R44859 whole brain .a 8249 to 8651 415 to 2   tiling clone,   414/462
(89 %)
0 diff
(100 %id)
BM683461 eye, fetal eye .a 8727 to 9332 620 to 15   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 606/606
(100 %)
1 diff
(99.9 %id)
DB380205 placenta .a 8740 to 9335 592 to 1       592/601
(98 %)
18 diff
(97.1 %id)
DB365384   .a 8760 to 9332 579 to 1       579/587
(98 %)
10 diff
(98.3 %id)
DB375968 placenta .a 8765 to 9335 571 to 1       571/571
(100 %)
15 diff
(97.4 %id)
DB369285   .a 8771 to 9335 560 to 1       560/560
(100 %)
14 diff
(97.5 %id)
DB315025 brain .a 8785 to 9335 552 to 1       552/552
(100 %)
1 diff
(99.9 %id)
DB316297 brain .a 8805 to 9335 531 to 1       531/531
(100 %)
1 diff
(99.9 %id)
AA280025 germinal center B cell .a 8988 to 9335 350 to 1       350/353
(99 %)
2 diff
(99.5 %id)
R44598 whole brain .a 9026 to 9335 327 to 15   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 313/327
(95 %)
7 diff
(97.9 %id)
Z40582 brain, total brain .a 9055 to 9332 278 to 1       278/278
(100 %)
0 diff
(100 %id)
DW425250 Liver .b 1 to 268 17 to 284   tiling clone,   268/286
(93 %)
8 diff
(97.3 %id)
AK126023 testis .b 80 to 5131 1 to 5052 N779S L1316* tiling clone, available from FLJ,   5052/5052
(100 %)
3 diff
(100.0 %id)
DB082295 testis .b 81 to 620 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB340900 testis .b 4592 to 5129 540 to 3       538/540
(99 %)
0 diff
(100 %id)
AK025577   .c 1 to 2415 1 to 2415 N38S K522E I711L tiling clone, available from FLJ, AAA   2415/2415
(100 %)
5 diff
(99.8 %id)
BP228925 brain .c 2107 to 2687 1 to 581   tiling clone,   581/581
(100 %)
0 diff
(100 %id)
AI922837 adenocarcinoma, Pancreas .c 2141 to 2415 304 to 29   AAA   276/276
(100 %)
10 diff
(96.4 %id)
CN293793 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 2411 to 2567 1 to 157       157/167
(94 %)
1 diff
(99.5 %id)
BU072517 Pancreas, Purified pancreatic islet .d 1 to 448 1 to 448 exact tiling clone,   448/448
(100 %)
2 diff
(99.6 %id)
CD644699 Embryonic Stem cells .e 1 to 817 12 to 822 Q87T A102X F106X P110X P112X ... tiling clone,   811/829
(97 %)
19 diff
(97.8 %id)
CD657089 Embryonic Stem cells .e 1 to 771 12 to 777   tiling clone,   766/818
(93 %)
18 diff
(97.8 %id)
DA801966 brain .f-u 1 to 471 2 to 472   tiling clone, to resequence, capped   471/471
(100 %)
0 diff
(100 %id)
DA189148 amygdala .f-u 284 to 869 2 to 588   tiling clone, capped   587/587
(100 %)
2 diff
(99.7 %id)
CD644067 Embryonic Stem cells .f-u 519 to 1314 12 to 798 exact tiling clone,   787/817
(96 %)
16 diff
(98.1 %id)
BX501133 Liver .f-u 530 to 1243 1 to 714 M22V tiling clone,   714/714
(100 %)
3 diff
(99.6 %id)
DB220902 trachea .f-u 576 to 1151 2 to 577 exact capped   576/576
(100 %)
1 diff
(99.9 %id)
BF542002 hypernephroma, Kidney .f-u 2074 to 2774 1 to 707   tiling clone,   707/718
(98 %)
28 diff
(96.2 %id)
DA612831   .f-u 2085 to 2669 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
BG164932 hypernephroma, cell line, Kidney .f-u 2135 to 2961 1 to 831       831/871
(95 %)
48 diff
(94.5 %id)
DT220460 brain .f-u 2159 to 2791 1 to 633       633/635
(99 %)
2 diff
(99.7 %id)
BE905160 epithelioid carcinoma, Pancreas .f-u 2176 to 2959 1 to 775       775/794
(97 %)
31 diff
(96.1 %id)
AW606194 head_neck .f-u 2186 to 2451 274 to 8       267/277
(96 %)
0 diff
(100 %id)
AI824802 pooled germ cell tumors .f-u 2212 to 2555 345 to 1       345/349
(98 %)
1 diff
(99.8 %id)
BG498331 adenocarcinoma, Prostate .f-u 2241 to 2899 1 to 656       656/656
(100 %)
5 diff
(99.3 %id)
CF618807 Pooled Chondrosarcoma Tumor cells .f-u 2241 to 2996 1 to 779       779/904
(86 %)
6 diff
(99.4 %id)
CF618806 Pooled Chondrosarcoma Tumor cells .f-u 2241 to 3029 1 to 795       795/894
(88 %)
6 diff
(99.4 %id)
CD102117 Pooled-Skin .f-u 2242 to 2980 1 to 744       744/750
(99 %)
11 diff
(98.6 %id)
AW382784 head_neck .f-u 2243 to 2591 367 to 19       349/367
(95 %)
0 diff
(100 %id)
BE931923 head_neck .f-u 2263 to 2588 14 to 343       330/352
(93 %)
23 diff
(93.5 %id)
BY796117 eye .f-u 2306 to 2880 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BM459681 leiomyosarcoma, uterus .f-u 2343 to 3218 1 to 882   tiling clone,   882/882
(100 %)
15 diff
(98.3 %id)
BM711453 eye, fetal eyes .f-u 2399 to 2940 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
BM476067 eye, retinoblastoma .f-u 2408 to 3436 6 to 1047       1042/1070
(97 %)
6 diff
(99.5 %id)
AA249363   .f-u 2416 to 2552 1 to 134       134/134
(100 %)
7 diff
(94.8 %id)
BG494611 lung, mucoepidermoid carcinoma .f-u 2467 to 3060 1 to 593       593/593
(100 %)
2 diff
(99.7 %id)
N78362 multiple sclerosis lesions .f-u 2522 to 3077 1 to 563   fully sequenced,   563/563
(100 %)
14 diff
(97.6 %id)
CR739358   .f-u 2618 to 3104 1 to 487       487/487
(100 %)
0 diff
(100 %id)
FN162049 breast carcinoma .f-u 2631 to 2732 104 to 2     Submitted on the opposite strand 103/107
(96 %)
0 diff
(100 %id)
H88600 cochlea, ear .f-u 2655 to 3042 1 to 395   fully sequenced,   395/395
(100 %)
10 diff
(97.5 %id)
TI_154115496   .f-u 2673 to 3475 877 to 85   AAA   793/943
(84 %)
10 diff
(99.0 %id)
BU194044 melanotic melanoma, skin .f-u 2677 to 3472 1 to 795   AAA   795/795
(100 %)
3 diff
(99.7 %id)
AA136958 uterus .f-u 2704 to 3064 1 to 369   fully sequenced,   369/369
(100 %)
14 diff
(96.3 %id)
BP423644 small intestine .f-u 2739 to 3260 1 to 522     Submitted on the opposite strand 522/522
(100 %)
0 diff
(100 %id)
BF241191 bone marrow, from acute myelogenous leukemia .f-u 2846 to 3369 1 to 519       519/887
(58 %)
43 diff
(95.2 %id)
CA449218 Chondrosarcoma, Left Pubic Bone .f-u 2847 to 3475 644 to 16   AAA   629/629
(100 %)
0 diff
(100 %id)
AW294894   .f-u 2895 to 3475 595 to 15   AAA   581/581
(100 %)
4 diff
(99.4 %id)
DB326979 brain .f-u 2916 to 3472 558 to 1   to resequence,   558/558
(100 %)
1 diff
(99.9 %id)
BE465417 Kidney .f-u 2933 to 3475 542 to 1       542/542
(100 %)
2 diff
(99.7 %id)
AI656243 pooled germ cell tumors .f-u 2939 to 3476 538 to 1       538/538
(100 %)
4 diff
(99.3 %id)
AI809614 pooled .f-u 2961 to 3479 522 to 4       519/522
(99 %)
0 diff
(100 %id)
AW631327 pooled .f-u 2961 to 3478 518 to 1       518/518
(100 %)
0 diff
(100 %id)
BF056981 pooled germ cell tumors .f-u 2963 to 3475 513 to 1       513/513
(100 %)
0 diff
(100 %id)
BE673053 pooled germ cell tumors .f-u 2972 to 3475 504 to 1       504/504
(100 %)
0 diff
(100 %id)
BQ216517 melanotic melanoma, skin .f-u 2977 to 3475 54 to 553   AAA   500/553
(90 %)
6 diff
(99.0 %id)
AI521686 Kidney .f-u 3015 to 3186 172 to 1       172/172
(100 %)
2 diff
(98.9 %id)
AI332945 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 3016 to 3479 469 to 6   tiling clone,   464/469
(98 %)
0 diff
(100 %id)
AI800241 Kidney .f-u 3016 to 3475 460 to 1       460/460
(100 %)
0 diff
(100 %id)
H96656 melanocyte .f-u 3020 to 3475 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
AI291313 placenta .f-u 3021 to 3479 459 to 1       459/459
(100 %)
1 diff
(99.8 %id)
H88601 cochlea, ear .f-u 3024 to 3450 434 to 1   fully sequenced,   434/434
(100 %)
14 diff
(96.8 %id)
AI369449 anaplastic oligodendroglioma, brain .f-u 3029 to 3475 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AI085768 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 3038 to 3477 440 to 1       440/440
(100 %)
0 diff
(100 %id)
N62596 multiple sclerosis lesions .f-u 3047 to 3475 436 to 1   fully sequenced,   436/436
(100 %)
7 diff
(98.4 %id)
BE206653 adenocarcinoma cell line, ovary .f-u 3047 to 3475 441 to 13   AAA   429/429
(100 %)
6 diff
(98.7 %id)
AA136884 uterus .f-u 3049 to 3485 438 to 2   fully sequenced,   437/438
(99 %)
0 diff
(100 %id)
AW051849 pooled .f-u 3056 to 3472 417 to 1       417/417
(100 %)
5 diff
(98.9 %id)
BM670701 eye, fetal eyes .f-u 3059 to 3475 432 to 16   AAA   417/417
(100 %)
0 diff
(100 %id)
BQ188562 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f-u 3085 to 3475 1 to 391   fully sequenced, AAA   391/391
(100 %)
0 diff
(100 %id)
TI_151732035   .f-u 3085 to 3475 468 to 78   AAA   391/970
(40 %)
0 diff
(100 %id)
AW628529 pooled .f-u 3102 to 3475 389 to 16   AAA   374/374
(100 %)
1 diff
(99.8 %id)
CN285613 embryonic stem cells, cell lines H1, H7, andH9 .f-u 3103 to 3478 1 to 376       376/376
(100 %)
2 diff
(99.5 %id)
AA827843 germinal center B cell .f-u 3109 to 3472 389 to 27   AAA   363/370
(98 %)
2 diff
(99.5 %id)
AI025951 parathyroid gland, parathyroid tumor .f-u 3112 to 3479 372 to 5       368/372
(98 %)
0 diff
(100 %id)
AA454100   .f-u 3114 to 3409 1 to 296     Submitted on the opposite strand 296/296
(100 %)
0 diff
(100 %id)
AA961618 pooled .f-u 3117 to 3472 356 to 1       356/356
(100 %)
0 diff
(100 %id)
BU533100 mixed (pool of 40 RNAs) .f-u 3132 to 3482 1 to 351       351/373
(94 %)
7 diff
(98.2 %id)
CB140386 Liver .f-u 3133 to 3411 1 to 279       279/279
(100 %)
0 diff
(100 %id)
H44386 breast .f-u 3138 to 3467 1 to 331       331/331
(100 %)
1 diff
(99.7 %id)
AI000264 Kidney .f-u 3141 to 3351 211 to 1       211/211
(100 %)
1 diff
(99.6 %id)
AW078937 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .f-u 3150 to 3475 325 to 1       325/325
(100 %)
1 diff
(99.7 %id)
AW168575 bowel (skin primary), metastatic melanoma to bowel .f-u 3150 to 3479 331 to 2       330/331
(99 %)
0 diff
(100 %id)
AW439344 serous papillary carcinoma, high grade, 2pooled tumors, uterus .f-u 3150 to 3476 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AW339047 adenocarcinoma, Pancreas .f-u 3150 to 3475 326 to 1       326/326
(100 %)
0 diff
(100 %id)
AW769001 colon, moderately-differentiated adenocarcinoma .f-u 3150 to 3473 324 to 1       324/324
(100 %)
0 diff
(100 %id)
AI094105 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 3157 to 3475 319 to 1       319/319
(100 %)
0 diff
(100 %id)
AA452517   .f-u 3160 to 3468 309 to 1     Submitted on the opposite strand 309/309
(100 %)
0 diff
(100 %id)
AA749230 germinal center B cell .f-u 3173 to 3475 339 to 37   AAA   303/303
(100 %)
0 diff
(100 %id)
BM452320 eye, retinoblastoma .f-u 3182 to 3468 1 to 287   AAA   287/287
(100 %)
0 diff
(100 %id)
AI584078 adenocarcinoma, Pancreas .f-u 3185 to 3475 311 to 21   AAA   291/291
(100 %)
4 diff
(98.7 %id)
BI092350 cervix .f-u 3185 to 3481 1 to 296   AAA   296/296
(100 %)
3 diff
(99.0 %id)
FN106091 breast carcinoma .f-u 3248 to 3320 1 to 72       72/73
(98 %)
2 diff
(97.3 %id)
CK299785 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f-u 3265 to 3475 226 to 16   fully sequenced, AAA   211/211
(100 %)
0 diff
(100 %id)
EH352504   .f-u 3390 to 3485 1 to 96       96/112
(85 %)
4 diff
(96.5 %id)
AA748756 germinal center B cell .f-u 3407 to 3475 79 to 11   AAA   69/69
(100 %)
0 diff
(100 %id)
CD655931 Embryonic Stem cells .g-u 1 to 777 7 to 778 S2L tiling clone,   772/812
(95 %)
17 diff
(98.0 %id)
CN259428 embryonic stem cells, DMSO-treated H9 cellline .h 1 to 503 1 to 503 exact tiling clone,   503/503
(100 %)
0 diff
(100 %id)
GD154216   .h 347 to 429 1 to 82   AAA   82/82
(100 %)
3 diff
(96.4 %id)
BF431027 Kidney .i 1 to 304 304 to 1 N6K tiling clone,   304/304
(100 %)
1 diff
(99.7 %id)
U51699 heart, normal gingiva Gene QSER1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC