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Gene C12orf49TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
225 supporting clones for gene C12orf49 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI463927 testis .a 1 to 733 7 to 793   tiling clone,   752/806
(93 %)
54 diff
(93.4 %id)
CN259570 embryonic stem cells, cell lines H1, H7, andH9 .a 40 to 609 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
DN997699 breast cancer, Mammary gland (cancer tissue) .a 47 to 832 8 to 791 A205L tiling clone,   784/791
(99 %)
8 diff
(99.0 %id)
AK222983 human small intestine .a 51 to 1183 1 to 1133 L143P     1133/1133
(100 %)
1 diff
(100.0 %id)
CR625981 Neuroblastoma Cot 25-normalized .a 59 to 1334 1 to 1276 exact tiling clone,   1276/1276
(100 %)
0 diff
(100 %id)
AL527722 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 59 to 693 1 to 635   fully sequenced,   635/635
(100 %)
17 diff
(97.4 %id)
BP220628 colon .a 62 to 611 1 to 550       550/550
(100 %)
4 diff
(99.3 %id)
AK025068 colon .a 63 to 2837 1 to 2775 exact tiling clone, available from FLJ, AAA   2775/2775
(100 %)
2 diff
(100.0 %id)
NM_024738.1   .a 63 to 2837 1 to 2775 exact RefSeq, AAA   2775/2775
(100 %)
2 diff
(100.0 %id)
AI204955 schizophrenic brain S-11 frontal lobe .a 78 to 347 38 to 307     Submitted on the opposite strand 270/307
(87 %)
6 diff
(98.1 %id)
AW505600 lymph .a 88 to 482 1 to 395       395/395
(100 %)
4 diff
(99.0 %id)
BM471518 eye, retinoblastoma .a 88 to 710 1 to 633       633/1149
(55 %)
14 diff
(98.8 %id)
BI600386 brain, hypothalamus .a 89 to 929 1 to 852 E197R S198K P199A P200C E201R ...     852/998
(85 %)
30 diff
(97.0 %id)
CN259573 embryonic stem cells, cell lines H1, H7, andH9 .a 91 to 791 1 to 701       701/701
(100 %)
0 diff
(100 %id)
TI_45211866   .a 94 to 929 91 to 937 E197R S198K P199A P200C E201R ...     847/1083
(78 %)
34 diff
(96.9 %id)
TI_154162360   .a 94 to 634 79 to 619       541/541
(100 %)
7 diff
(98.8 %id)
DB495066 hypothalamus .a 97 to 581 1 to 485       485/485
(100 %)
1 diff
(99.8 %id)
DB503088 hypothalamus .a 97 to 566 1 to 470       470/470
(100 %)
0 diff
(100 %id)
BU194967 melanotic melanoma, skin .a 111 to 620 9 to 518       510/933
(54 %)
16 diff
(98.3 %id)
BQ777209 Pancreas, Purified pancreatic islet .a 112 to 722 1 to 611       611/611
(100 %)
8 diff
(98.7 %id)
CA394526 eye, RPE/choroid .a 117 to 638 1 to 522       522/522
(100 %)
0 diff
(100 %id)
CK902305 Pancreas, Purified pancreatic islet .a 153 to 721 1 to 569     Submitted on the opposite strand 569/569
(100 %)
0 diff
(100 %id)
BI253203 cervical carcinoma cell line, cervix .a 165 to 993 7 to 835 M7S V8G W9V R10A R11P ...     829/885
(93 %)
23 diff
(97.5 %id)
BC019843 Cervix, carcinoma .a 171 to 1291 1 to 1121 exact available from MGC, AAA   1121/1121
(100 %)
0 diff
(100 %id)
CV029434 mixed .a 201 to 817 1 to 615       615/654
(94 %)
3 diff
(99.6 %id)
TI_1948090345   .a 201 to 676 124 to 607       482/1275
(37 %)
24 diff
(98.2 %id)
BE897432 melanotic melanoma, skin .a 308 to 922 11 to 632       626/632
(99 %)
43 diff
(93.2 %id)
CN259568 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 362 to 911 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
CB048464 Prostate .a 362 to 852 10 to 500       491/500
(98 %)
6 diff
(98.8 %id)
CN259571 embryonic stem cells, DMSO-treated H9 cellline .a 365 to 958 7 to 600       594/600
(99 %)
8 diff
(98.7 %id)
AA026571 uterus .a 409 to 563 10 to 163       154/168
(91 %)
1 diff
(99.5 %id)
TI_159707748   .a 469 to 1268 874 to 81   AAA   792/1029
(76 %)
12 diff
(98.9 %id)
BQ021064 lung, Metastatic Chondrosarcoma .a 640 to 1291 670 to 19   AAA   652/652
(100 %)
1 diff
(99.9 %id)
BQ009949 Chondrosarcoma, Left Pubic Bone .a 642 to 1291 668 to 19   AAA   650/650
(100 %)
0 diff
(100 %id)
DA624785 Kidney .a 661 to 1217 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
AL562964 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 663 to 1334 673 to 1   fully sequenced,   673/673
(100 %)
15 diff
(97.8 %id)
DA711375   .a 663 to 1221 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA740460   .a 663 to 1215 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA506512 brain .a 668 to 1236 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AW872378 carcinoid, lung .a 672 to 1291 613 to 1       616/613
(100 %)
26 diff
(95.8 %id)
AW300157 Kidney .a 724 to 1292 570 to 2       569/570
(99 %)
0 diff
(100 %id)
BQ188632 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 725 to 1291 1 to 567   fully sequenced, AAA   567/567
(100 %)
1 diff
(99.9 %id)
BE550951 carcinoid, lung .a 731 to 1291 561 to 1       561/561
(100 %)
0 diff
(100 %id)
CA419157 Chondrosarcoma Grade II, Left Pelvis .a 763 to 1376 631 to 19   AAA   613/613
(100 %)
2 diff
(99.7 %id)
BQ575369 Chondrosarcoma Grade II, Left Pelvis .a 767 to 1485 736 to 19   AAA   718/718
(100 %)
1 diff
(99.9 %id)
AI492878 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 788 to 1291 517 to 14   AAA   504/504
(100 %)
0 diff
(100 %id)
AI492166 B-cell, chronic lymphotic leukemia .a 796 to 1291 512 to 17   AAA   496/496
(100 %)
1 diff
(99.8 %id)
AI623216 pooled germ cell tumors .a 796 to 1291 496 to 1       496/496
(100 %)
9 diff
(98.2 %id)
AI589793 anaplastic oligodendroglioma, brain .a 806 to 1292 489 to 3       487/489
(99 %)
0 diff
(100 %id)
AW195505 Kidney .a 807 to 1286 496 to 12   AAA   485/485
(100 %)
11 diff
(97.8 %id)
BF590567 colon, colon tumor, RER+ .a 807 to 1291 485 to 1       485/485
(100 %)
0 diff
(100 %id)
AI018506 breast .a 812 to 1290 479 to 1       479/479
(100 %)
0 diff
(100 %id)
BG150537 pooled germ cell tumors .a 831 to 1291 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AI832235 colon, colon tumor, RER+ .a 839 to 1250 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
BQ778321 Pancreas, Purified pancreatic islet .a 849 to 1292 450 to 7       444/450
(98 %)
0 diff
(100 %id)
AI356201 brain, glioblastoma (pooled) .a 854 to 1291 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AW139959   .a 855 to 1291 454 to 18   AAA   437/437
(100 %)
4 diff
(99.1 %id)
AI818723 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 865 to 1311 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AI379951 B-cell, chronic lymphotic leukemia .a 874 to 1273 410 to 11   AAA   400/400
(100 %)
1 diff
(99.8 %id)
AI189976 placenta .a 875 to 1292 423 to 6       418/423
(98 %)
0 diff
(100 %id)
AI244879 Kidney .a 875 to 1291 417 to 1       417/417
(100 %)
1 diff
(99.8 %id)
AW001455 colon, colonic mucosa from 3 patients with Crohn'sdisease .a 878 to 1347 484 to 14   AAA   471/471
(100 %)
5 diff
(99.0 %id)
AL701901 human skeletal muscle .a 879 to 1361 1 to 483       483/483
(100 %)
2 diff
(99.6 %id)
AI804755 Prostate .a 889 to 1291 427 to 25   AAA   403/403
(100 %)
3 diff
(99.3 %id)
BQ214653 melanotic melanoma, skin .a 894 to 1273 8 to 387   AAA   380/387
(98 %)
8 diff
(98.0 %id)
AA541383 colon .a 907 to 1291 384 to 1       384/384
(100 %)
4 diff
(99.0 %id)
BF056318 pooled .a 909 to 1313 408 to 4       405/408
(99 %)
0 diff
(100 %id)
BG176980 lymph, lymphoma, cell line .a 916 to 1727 1 to 822       822/918
(89 %)
43 diff
(95.4 %id)
AI199448 anaplastic oligodendroglioma, brain .a 934 to 1307 385 to 12   AAA   374/374
(100 %)
2 diff
(99.5 %id)
AA303123 aorta .a 936 to 1237 1 to 301       301/305
(98 %)
3 diff
(99.1 %id)
AI261315 Kidney .a 942 to 1291 362 to 13   AAA   350/350
(100 %)
1 diff
(99.8 %id)
BF434458 Kidney .a 944 to 1376 433 to 1       433/433
(100 %)
0 diff
(100 %id)
AI962333 pooled germ cell tumors .a 951 to 1349 419 to 20   AAA   400/400
(100 %)
10 diff
(97.5 %id)
AW273312 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 962 to 1291 348 to 19   AAA   330/330
(100 %)
6 diff
(98.2 %id)
AI911642 adenocarcinoma, Pancreas .a 963 to 1376 438 to 25   AAA   414/414
(100 %)
22 diff
(94.7 %id)
AA514509 colon .a 978 to 1291 314 to 1       314/314
(100 %)
0 diff
(100 %id)
AA483574 Ewing's sarcoma .a 980 to 1291 322 to 11   AAA   312/312
(100 %)
1 diff
(99.7 %id)
BQ431195 melanotic melanoma, skin .a 981 to 1683 1 to 704       704/900
(78 %)
14 diff
(98.5 %id)
DA779938 brain .a 1010 to 1575 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
CD105642 brain, Pituitary .a 1012 to 1312 1 to 301   AAA   301/974
(30 %)
1 diff
(99.9 %id)
AI658877 Prostate .a 1015 to 1291 299 to 23   AAA   277/277
(100 %)
1 diff
(99.7 %id)
AI016678 Kidney .a 1022 to 1291 270 to 1       270/270
(100 %)
0 diff
(100 %id)
DA022859   .a 1058 to 1608 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AI280940 adenocarcinoma, colon .a 1089 to 1291 203 to 1       203/203
(100 %)
0 diff
(100 %id)
BQ184343 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1096 to 1291 214 to 19   fully sequenced, AAA   196/196
(100 %)
0 diff
(100 %id)
AA709027 uterus .a 1100 to 1291 203 to 12   AAA   192/192
(100 %)
0 diff
(100 %id)
AI673166 colon, colonic mucosa from 3 patients with Crohn'sdisease .a 1111 to 1269 161 to 3       159/161
(98 %)
0 diff
(100 %id)
BE167456 head_neck .a 1150 to 1442 305 to 12     Submitted on the opposite strand 294/305
(96 %)
0 diff
(100 %id)
CD558287 White Matter .a 1160 to 1991 1 to 835       835/900
(92 %)
7 diff
(99.3 %id)
DA404033 thalamus .a 1178 to 1719 2 to 543   capped   542/543
(99 %)
1 diff
(99.9 %id)
BE169309 head_neck .a 1223 to 1375 1 to 151       151/153
(98 %)
6 diff
(96.1 %id)
DA150785 amygdala .a 1235 to 1806 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BX350760   .a 1268 to 2204 929 to 1       929/931
(99 %)
30 diff
(96.8 %id)
BP303507   .a 1296 to 1876 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CN259569 embryonic stem cells, cell lines H1, H7, andH9 .a 1299 to 1893 1 to 593       593/593
(100 %)
2 diff
(99.7 %id)
AA384991 thyroid gland .a 1345 to 1623 1 to 278       278/278
(100 %)
1 diff
(99.7 %id)
BU570939 testis .a 1401 to 2105 1 to 710       710/952
(74 %)
15 diff
(98.5 %id)
DB574297 hypothalamus .a 1412 to 1872 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
BG576908 breast, mammary adenocarcinoma, cell line .a 1420 to 2112 1 to 692   AAA   692/692
(100 %)
2 diff
(99.8 %id)
TI_57193752   .a 1425 to 2188 50 to 821       772/989
(78 %)
18 diff
(98.2 %id)
BI861040 breast, mammary adenocarcinoma, cell line .a 1426 to 2188 1 to 771       771/988
(78 %)
18 diff
(98.2 %id)
BQ437586 melanotic melanoma, skin .a 1457 to 2324 1 to 867       867/869
(99 %)
7 diff
(99.2 %id)
DA179528 amygdala .a 1603 to 2161 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BP220790 colon .a 1647 to 2203 1 to 557       557/557
(100 %)
5 diff
(99.2 %id)
AA429797   .a 1661 to 2107 1 to 447       447/447
(100 %)
0 diff
(100 %id)
BX482328   .a 1690 to 2143 7 to 460       454/460
(98 %)
6 diff
(98.7 %id)
TI_154187824   .a 1690 to 2452 83 to 840       758/1028
(73 %)
22 diff
(97.9 %id)
BQ889977 brain, neuroblastoma, cell line .a 1703 to 2570 24 to 898       875/973
(89 %)
23 diff
(97.7 %id)
TI_154139423   .a 1763 to 2413 91 to 738       648/738
(87 %)
6 diff
(99.2 %id)
BE159255 head_neck .a 1768 to 1872 114 to 11     Submitted on the opposite strand 104/114
(91 %)
0 diff
(100 %id)
CA503303 Human Lung Epithelial cells, lung .a 1805 to 2529 2 to 725     Submitted on the opposite strand 724/725
(99 %)
6 diff
(99.2 %id)
BG120188 adenocarcinoma, cell line, Liver .a 1844 to 2585 1 to 741       741/931
(79 %)
20 diff
(97.9 %id)
DA227785 brain .a 1852 to 2423 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BX364270   .a 1881 to 2806 921 to 1       921/921
(100 %)
36 diff
(96.1 %id)
TI_149303112   .a 1989 to 2823 907 to 79   AAA   829/958
(86 %)
11 diff
(98.9 %id)
BM981179 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2007 to 2823 829 to 19   AAA   811/812
(99 %)
6 diff
(99.3 %id)
BU618785 Cell Line, Chondrosarcoma .a 2087 to 2823 755 to 19   AAA   737/737
(100 %)
0 diff
(100 %id)
BM911434 amelanotic melanoma, cell line, skin .a 2101 to 2538 1 to 438       438/1310
(33 %)
8 diff
(99.4 %id)
H42680 breast .a 2119 to 2482 1 to 373       373/423
(88 %)
14 diff
(96.7 %id)
BX092471 breast .a 2120 to 2841 1 to 721   tiling clone, AAA   721/721
(100 %)
1 diff
(99.9 %id)
BX331189   .a 2124 to 2825 710 to 8       703/765
(91 %)
0 diff
(100 %id)
BM998524 lung, Metastatic Chondrosarcoma .a 2301 to 2838 556 to 19   AAA   538/538
(100 %)
0 diff
(100 %id)
BM841297 lymph node, stomach .a 2309 to 2770 1 to 461       461/461
(100 %)
2 diff
(99.6 %id)
AI377800 pooled .a 2322 to 2824 503 to 1       503/503
(100 %)
2 diff
(99.7 %id)
AA830108 germinal center B cell .a 2344 to 2773 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AI290611 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2374 to 2837 466 to 1       466/467
(99 %)
5 diff
(99.0 %id)
DA341949 substantia nigra .a 2395 to 2882 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
AI640593 Kidney .a 2398 to 2840 445 to 2       444/445
(99 %)
0 diff
(100 %id)
BU146845 brain, neuroblastoma, cell line .a 2398 to 3173 1 to 781       781/796
(98 %)
23 diff
(97.2 %id)
DA441885 tongue, tumor tissue .a 2403 to 2967 2 to 566   tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
AA830400 germinal center B cell .a 2407 to 2773 367 to 1       367/367
(100 %)
1 diff
(99.8 %id)
AA514750 breast .a 2455 to 2837 383 to 1       383/383
(100 %)
0 diff
(100 %id)
AI254333 brain, tumor, 5 pooled (see description) .a 2458 to 2838 400 to 20   AAA   381/381
(100 %)
0 diff
(100 %id)
AA329614   .a 2480 to 2602 1 to 123       123/123
(100 %)
0 diff
(100 %id)
AW381167 head_neck .a 2492 to 2651 1 to 163       163/163
(100 %)
3 diff
(98.2 %id)
BF351797 head_neck .a 2511 to 2729 1 to 222       222/222
(100 %)
11 diff
(95.1 %id)
BM750719 Ascites, stomach .a 2518 to 2697 1 to 177       177/177
(100 %)
3 diff
(98.4 %id)
BF910318 uterus_tumor .a 2555 to 2880 336 to 9     Submitted on the opposite strand 328/336
(97 %)
0 diff
(100 %id)
BF155716 head_neck .a 2573 to 2880 1 to 306       306/315
(97 %)
14 diff
(95.6 %id)
DB514205 testis .a 2577 to 2838 2 to 262     Submitted on the opposite strand 261/262
(99 %)
6 diff
(97.8 %id)
H42729 breast .a 2591 to 2803 225 to 12       214/225
(95 %)
0 diff
(100 %id)
BF961520 nervous_normal .a 2755 to 3252 499 to 3       497/499
(99 %)
0 diff
(100 %id)
BE181700 head_neck .a 2800 to 3115 1 to 317   tiling clone,   317/317
(100 %)
10 diff
(96.9 %id)
BE159246 head_neck .a 2881 to 3016 1 to 135       135/139
(97 %)
3 diff
(97.9 %id)
BM564884 eye, retinoblastoma .a 3041 to 3427 1 to 387   tiling clone,   387/1380
(28 %)
1 diff
(100.0 %id)
AI299584 2 pooled tumors (clear cell type), Kidney .a 3144 to 3576 433 to 1   tiling clone,   433/433
(100 %)
1 diff
(99.8 %id)
DW446766 Liver .a 3519 to 3715 17 to 215       199/215
(92 %)
6 diff
(97.3 %id)
DW448516 Liver .a 3519 to 3707 17 to 207       191/207
(92 %)
6 diff
(97.2 %id)
CV574400 cornea, eye .a 3565 to 3756 1 to 192   tiling clone,   192/233
(82 %)
2 diff
(99.2 %id)
DC365472   .b 1 to 484 1 to 485 exact tiling clone,   485/485
(100 %)
1 diff
(99.8 %id)
DC426252   .b 1947 to 2482 537 to 1   tiling clone,   537/537
(100 %)
1 diff
(99.9 %id)
AI904520 breast .c 1 to 492 510 to 19 exact tiling clone,   492/510
(96 %)
0 diff
(100 %id)
DA734357   .c 376 to 866 2 to 493   tiling clone, capped   492/492
(100 %)
10 diff
(98.0 %id)
CD672059 eye, Iris .c 932 to 1472 32 to 573   tiling clone,   542/573
(94 %)
6 diff
(99.0 %id)
BG739747 skin .c 1268 to 2102 1 to 829   tiling clone,   829/830
(99 %)
18 diff
(97.9 %id)
TI_154020827   .c 1489 to 2172 765 to 83   AAA   683/684
(99 %)
10 diff
(98.6 %id)
BQ006142 Chondrosarcoma, Left Pelvis .c 1506 to 2172 686 to 19   tiling clone, AAA   668/668
(100 %)
2 diff
(99.8 %id)
TI_154139092   .c 1511 to 2132 700 to 80     Submitted on the opposite strand 621/625
(99 %)
11 diff
(98.3 %id)
BG033256 breast, mammary adenocarcinoma, cell line .c 1532 to 2158 7 to 631       625/632
(98 %)
6 diff
(99.1 %id)
BF940107 brain, glioblastoma (pooled) .c 1546 to 2044 499 to 1   tiling clone,   499/499
(100 %)
1 diff
(99.8 %id)
CA438661 lung, Metastatic Chondrosarcoma .c 1552 to 2172 639 to 19   AAA   621/623
(99 %)
6 diff
(99.1 %id)
N43005 melanocyte .c 1555 to 1779 1 to 226   fully sequenced,   226/226
(100 %)
3 diff
(98.7 %id)
BE464965 carcinoid, lung .c 1556 to 2074 1 to 519     Submitted on the opposite strand 519/519
(100 %)
2 diff
(99.7 %id)
BF437947 carcinoid, lung .c 1559 to 2120 1 to 562     Submitted on the opposite strand 562/562
(100 %)
1 diff
(99.9 %id)
BE763891 nervous_tumor .c 1583 to 2022 1 to 440       440/440
(100 %)
0 diff
(100 %id)
DB366414   .c 1593 to 2172 580 to 1       580/580
(100 %)
12 diff
(98.0 %id)
BQ776241 Bone, Human Chondrosarcoma Cell Line .c 1612 to 2172 580 to 19   AAA   562/562
(100 %)
2 diff
(99.7 %id)
AW242837 Kidney .c 1628 to 2172 547 to 1       547/547
(100 %)
3 diff
(99.5 %id)
BM829484 Ascites, stomach .c 1629 to 2173 558 to 14     Submitted on the opposite strand 545/558
(97 %)
0 diff
(100 %id)
BF196090 Kidney .c 1639 to 2172 534 to 1   tiling clone,   534/534
(100 %)
0 diff
(100 %id)
AW402709 lymph .c 1672 to 2132 468 to 8     Submitted on the opposite strand 461/468
(98 %)
0 diff
(100 %id)
AA512946 breast .c 1678 to 2171 494 to 1       494/494
(100 %)
0 diff
(100 %id)
AI828559 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1703 to 2167 492 to 28   AAA   465/465
(100 %)
0 diff
(100 %id)
N33343 melanocyte .c 1749 to 2172 426 to 1   fully sequenced,   426/426
(100 %)
2 diff
(99.6 %id)
AA776686 schizophrenic brain S-11 frontal lobe .c 1764 to 2167 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AA908183 carcinoid, lung .c 1777 to 2172 396 to 1       396/396
(100 %)
0 diff
(100 %id)
BE812123 amnion_normal .c 1831 to 2226 1 to 396   tiling clone,   396/402
(98 %)
8 diff
(98.1 %id)
BF061187 follicular carcinoma, thyroid .c 1856 to 2172 24 to 341   AAA Submitted on the opposite strand 318/341
(93 %)
9 diff
(97.4 %id)
CD672058 eye, Iris .c 1908 to 2172 281 to 17   AAA   265/265
(100 %)
0 diff
(100 %id)
R05828 liver and spleen .c 1912 to 2166 268 to 8       261/275
(94 %)
0 diff
(100 %id)
AW183346 pooled .c 1935 to 2173 239 to 1       239/239
(100 %)
0 diff
(100 %id)
BX483094   .d-u 1 to 532 11 to 542   tiling clone,   532/542
(98 %)
6 diff
(98.9 %id)
TI_154131857   .d-u 7 to 736 786 to 55 exact     732/1084
(67 %)
0 diff
(100 %id)
CN399629 embryonic stem cells, DMSO-treated H9 cellline .d-u 60 to 785 733 to 8 W38C   Submitted on the opposite strand 726/733
(99 %)
0 diff
(100 %id)
BG180594 adenocarcinoma, cell line, Prostate .d-u 106 to 757 1 to 650 S37L W38L R39E C40M L41P ...     650/653
(99 %)
12 diff
(98.2 %id)
BQ645775 hepatocellular carcinoma, cell line, Liver .d-u 109 to 1012 26 to 939 exact tiling clone,   914/947
(96 %)
26 diff
(97.3 %id)
BE893995 melanotic melanoma, skin .d-u 112 to 805 1 to 691 I82M G83D Y84I T85L H87I ...     691/691
(100 %)
6 diff
(99.2 %id)
BE077546 breast .d-u 158 to 591 461 to 26 S65F H66P P67Y W68L D69G ...   Submitted on the opposite strand 436/477
(91 %)
0 diff
(100 %id)
CX754253 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d-u 233 to 989 1 to 744 exact   Submitted on the opposite strand 744/747
(99 %)
18 diff
(97.6 %id)
AA360709   .d-u 300 to 528 1 to 229       229/229
(100 %)
0 diff
(100 %id)
AW959009   .d-u 301 to 811 1 to 515 exact     515/525
(98 %)
11 diff
(98.0 %id)
AA384422 thyroid gland .d-u 327 to 703 1 to 381       381/382
(99 %)
7 diff
(98.2 %id)
BU161989 eye, retinoblastoma .d-u 334 to 1226 1 to 892       892/894
(99 %)
16 diff
(98.3 %id)
CN261481 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d-u 389 to 1116 1 to 728       728/728
(100 %)
0 diff
(100 %id)
TI_154131173   .d-u 405 to 1214 886 to 92   AAA   795/949
(83 %)
18 diff
(98.2 %id)
AA035206 uterus .d-u 487 to 905 1 to 418       418/418
(100 %)
3 diff
(99.3 %id)
BX104590 uterus .d-u 490 to 1222 1 to 733       733/733
(100 %)
1 diff
(99.9 %id)
FN082961 breast carcinoma .d-u 551 to 652 103 to 1     Submitted on the opposite strand 103/103
(100 %)
1 diff
(99.1 %id)
CK430661 eye, lacrimal gland .d-u 588 to 1220 1 to 633   tiling clone,   633/633
(100 %)
0 diff
(100 %id)
CF619105 Pooled Chondrosarcoma Tumor cells .d-u 681 to 1139 1 to 459       459/460
(99 %)
6 diff
(98.7 %id)
AA026235 uterus .d-u 714 to 958 1 to 251   fully sequenced,   251/251
(100 %)
1 diff
(99.7 %id)
CB528768 Aveolar Macrophage, lung .d-u 826 to 1209 400 to 17   AAA   384/384
(100 %)
1 diff
(99.8 %id)
BQ225673 melanotic melanoma, skin .d-u 829 to 1332 1 to 504   AAA   504/504
(100 %)
0 diff
(100 %id)
CA418064 Bone, Human Chondrosarcoma Cell Line .d-u 830 to 1214 403 to 19   AAA   385/385
(100 %)
0 diff
(100 %id)
AI418843 brain, glioblastoma (pooled) .d-u 851 to 1333 491 to 9       483/491
(98 %)
0 diff
(100 %id)
AA627883 normal prostate, Prostate .d-u 858 to 1269 413 to 2       412/413
(99 %)
0 diff
(100 %id)
AI362157 brain, glioblastoma (pooled) .d-u 892 to 1332 441 to 1       441/441
(100 %)
7 diff
(98.5 %id)
BE763844 nervous_tumor .d-u 897 to 1346 19 to 467   tiling clone,   449/467
(96 %)
6 diff
(98.8 %id)
BF365779 nervous_tumor .d-u 902 to 1356 19 to 474       456/479
(95 %)
11 diff
(97.8 %id)
AA349140 adrenal gland .d-u 904 to 1244 1 to 342       342/344
(99 %)
5 diff
(98.6 %id)
AA035207 uterus .d-u 924 to 1332 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AA026236 uterus .d-u 928 to 1263 336 to 1   fully sequenced,   336/336
(100 %)
0 diff
(100 %id)
AA761704 germinal center B cell .d-u 958 to 1332 409 to 34   AAA   376/376
(100 %)
1 diff
(99.8 %id)
AA045460 uterus .d-u 990 to 1333 345 to 2       344/345
(99 %)
0 diff
(100 %id)
AI088906 brain, glioblastoma (pooled) .d-u 1049 to 1333 288 to 4       285/288
(98 %)
0 diff
(100 %id)
C20746   .d-u 1332 to 1496 1 to 165   tiling clone,   165/165
(100 %)
0 diff
(100 %id)
BX358026 Placenta Cot 25-normalized .e 1 to 891 911 to 19 N25Y tiling clone,   893/912
(97 %)
2 diff
(99.8 %id)
TI_154130216   .f 1 to 723 804 to 88 W3R I5* tiling clone, AAA   717/958
(74 %)
12 diff
(98.8 %id)
AK298857   Gene C12orf49, variant not shown              
AK309652   Gene C12orf49, variant not shown              
BE144134 head_neck Gene C12orf49, variant not shown         This clone was ignored    
DB296580.
matches multiple genes
cerebellum Gene C12orf49, variant not shown         This clone was ignored, also hits gene cherbuby    
DB296580.
matches multiple genes
cerebellum Gene cherbuby, variant not shown         This clone was ignored, also hits gene cherbuby    
DA055977.
matches multiple genes
cerebellum Gene C12orf49, variant not shown       capped This clone was ignored, also hits gene cherbuby    
DA055977.
matches multiple genes
cerebellum Gene cherbuby, variant not shown       capped This clone was ignored, also hits gene cherbuby    
CN259572 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 Gene C12orf49, variant not shown              
CN259574 embryonic stem cells, DMSO-treated H9 cellline Gene C12orf49, variant not shown              
AV715344   Gene C12orf49, variant not shown         Suspected internal deletion, this clone was ignored    
H16795 whole brain Gene C12orf49, variant not shown         This clone was ignored    
H16905 whole brain Gene C12orf49, variant not shown         This clone was ignored    
AA487502   Gene C12orf49, variant not shown         This clone was ignored    
AA487718   Gene C12orf49, variant not shown         This clone was ignored    
AW137072   Gene C12orf49, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BG170094 hypernephroma, cell line, Kidney Gene C12orf49, variant not shown              
BG537618 lung Gene C12orf49, variant not shown              
BQ436399 embryonal carcinoma, cell line, testis Gene C12orf49, variant not shown         Suspected internal deletion, this clone was ignored    
DC366377   Gene C12orf49, variant not shown              
DA713210   Gene C12orf49, variant not shown       capped Suspected internal deletion, this clone was ignored    
CA426999 Bone, Subchondral Bone Gene C12orf49, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C