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Gene HEATR3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
128 supporting clones for gene HEATR3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC014415 Skin, melanotic melanoma. .a 1 to 2917 1 to 2911 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 2490/2912
(85 %)
11 diff
(99.7 %id)
DB131622 thymus .b 1 to 441 2 to 442   tiling clone, capped   441/441
(100 %)
0 diff
(100 %id)
DB040274 testis .b 28 to 377 2 to 351   capped   350/350
(100 %)
3 diff
(99.2 %id)
NM_182922.2   .b 29 to 2634 1 to 2606 exact RefSeq, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 2606/2606
(100 %)
0 diff
(100 %id)
DA098027 cerebellum .b 30 to 541 2 to 515   capped   514/514
(100 %)
3 diff
(99.5 %id)
DA787669 brain .b 30 to 376 2 to 348   capped   347/347
(100 %)
0 diff
(100 %id)
DA888837   .b 30 to 346 2 to 318   capped   317/317
(100 %)
0 diff
(100 %id)
BG333661 melanotic melanoma, skin .b 51 to 701 1 to 660   available from MGC,   660/947
(69 %)
22 diff
(97.7 %id)
BP242183 Liver .b 55 to 626 1 to 572       572/572
(100 %)
4 diff
(99.4 %id)
BG832098 epithelioid carcinoma cell line, Pancreas .b 63 to 582 1 to 521       521/768
(67 %)
15 diff
(98.1 %id)
BC018730 Pancreas, epithelioid carcinoma .b 64 to 2634 1 to 2571 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 2571/2571
(100 %)
7 diff
(99.8 %id)
DA306834 hippocampus .b 65 to 640 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA952976 Spleen .b 65 to 382 2 to 319   capped   318/322
(98 %)
1 diff
(99.7 %id)
BE244004 leukopheresis .b 67 to 337 1 to 271       271/271
(100 %)
4 diff
(98.6 %id)
BE384857.
matches multiple genes
melanotic melanoma, skin, Skin, melanotic melanoma. .b 71 to 702 1 to 633   available from MGC, also hits gene ADSL 633/655
(96 %)
4 diff
(99.4 %id)
DN999207   .b 97 to 725 8 to 636       629/636
(98 %)
7 diff
(98.9 %id)
CN427704 embryonic stem cells, cell lines H1, H7, andH9 .b 105 to 387 1 to 283       283/283
(100 %)
3 diff
(99.0 %id)
BF683197 leiomyosarcoma cell line, uterus .b 162 to 704 1 to 545       545/1116
(48 %)
6 diff
(99.5 %id)
BF685777 leiomyosarcoma cell line, uterus .b 162 to 702 1 to 546       546/627
(87 %)
8 diff
(98.8 %id)
BC033077 Uterus, leiomyosarcoma .b 163 to 2634 1 to 2472 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 2472/2472
(100 %)
10 diff
(99.6 %id)
DA030282   .b 391 to 964 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
AW938396 denis_drash .b 700 to 1052 1 to 354       354/354
(100 %)
6 diff
(98.4 %id)
BU161694 melanotic melanoma, skin .b 845 to 1735 1 to 892       892/896
(99 %)
4 diff
(99.6 %id)
AW852238 colon .b 974 to 1406 434 to 2       433/434
(99 %)
2 diff
(99.6 %id)
DA889074   .b 1020 to 1566 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
FN072899 breast carcinoma .b 1195 to 1274 1 to 84       82/84
(97 %)
6 diff
(92.9 %id)
BI223650 cervical carcinoma cell line, cervix .b 1220 to 1964 1 to 745       745/747
(99 %)
2 diff
(99.8 %id)
AA351702 brain .b 1286 to 1624 1 to 339       339/339
(100 %)
3 diff
(99.2 %id)
AW957714   .b 1289 to 1868 12 to 591       580/592
(97 %)
18 diff
(97.0 %id)
BF669597 brain, primitive neuroectoderm .b 1612 to 2244 1 to 627       627/793
(79 %)
21 diff
(97.4 %id)
CD365895 Alveolar Macrophage, lung .b 1646 to 2308 681 to 19   AAA   663/663
(100 %)
0 diff
(100 %id)
CK821646 Pancreas, Purified pancreatic islet .b 1733 to 2260 1 to 528     Submitted on the opposite strand 528/528
(100 %)
0 diff
(100 %id)
EC488524 Prostate .b 1742 to 1829 87 to 1       87/87
(100 %)
8 diff
(90.9 %id)
BM311185 Pancreas, Purified pancreatic islet .b 1764 to 2230 1 to 467       467/467
(100 %)
0 diff
(100 %id)
AW802482 uterus .b 1853 to 2222 1 to 370       370/370
(100 %)
3 diff
(99.2 %id)
AW802527 uterus .b 1853 to 2222 1 to 371       371/371
(100 %)
6 diff
(98.4 %id)
BE003801 breast_normal .b 1853 to 2217 1 to 366       366/366
(100 %)
5 diff
(98.7 %id)
BF327517 breast_normal .b 1853 to 2214 1 to 362       362/362
(100 %)
4 diff
(98.9 %id)
AW802546 uterus .b 1856 to 2191 1 to 336       336/336
(100 %)
3 diff
(99.2 %id)
BE926892 breast .b 1856 to 2354 506 to 9       498/509
(97 %)
1 diff
(99.9 %id)
BF361008 ovary .b 1932 to 2345 87 to 504       418/521
(80 %)
11 diff
(97.9 %id)
AW802492 uterus .b 1939 to 2358 415 to 1       415/415
(100 %)
7 diff
(98.4 %id)
AW802487 uterus .b 1948 to 2358 406 to 1       406/406
(100 %)
4 diff
(99.1 %id)
AW802504 uterus .b 1953 to 2329 377 to 1       377/377
(100 %)
5 diff
(98.7 %id)
AW802505 uterus .b 1974 to 2358 380 to 1       380/380
(100 %)
7 diff
(98.2 %id)
BE003675 breast_normal .b 1977 to 2345 370 to 1     Submitted on the opposite strand 370/370
(100 %)
2 diff
(99.5 %id)
BE003671 breast_normal .b 1984 to 2331 355 to 8     Submitted on the opposite strand 348/355
(98 %)
1 diff
(99.8 %id)
AW802497 uterus .b 1986 to 2358 368 to 1       368/368
(100 %)
6 diff
(98.4 %id)
BE003677 breast_normal .b 1999 to 2345 367 to 22     Submitted on the opposite strand 346/367
(94 %)
0 diff
(100 %id)
AW802555 uterus .b 2006 to 2354 352 to 4       349/352
(99 %)
2 diff
(99.5 %id)
BE003689 breast_normal .b 2007 to 2345 1 to 340       340/348
(97 %)
6 diff
(98.3 %id)
AW802598 uterus .b 2050 to 2354 313 to 9       305/313
(97 %)
1 diff
(99.7 %id)
FN081575 breast carcinoma .b 2144 to 2243 100 to 1     Submitted on the opposite strand 100/100
(100 %)
0 diff
(100 %id)
BE714294 head_neck .b 2165 to 2355 216 to 23       194/223
(86 %)
0 diff
(100 %id)
BE926875 breast .b 2235 to 2345 132 to 22       111/132
(84 %)
0 diff
(100 %id)
BM311772 Pancreas, Purified pancreatic islet .b 2237 to 2637 401 to 1   tiling clone,   401/401
(100 %)
6 diff
(98.6 %id)
CK821647 Pancreas, Purified pancreatic islet .b 2330 to 2598 269 to 1     Submitted on the opposite strand 269/269
(100 %)
6 diff
(97.8 %id)
CN264262 embryonic stem cells, cell lines H1, H7, andH9 .b 2377 to 2678 1 to 304   tiling clone,   304/304
(100 %)
10 diff
(96.8 %id)
BF979792 testis .c 1 to 599 1 to 597   tiling clone, fully sequenced,   597/597
(100 %)
3 diff
(99.5 %id)
BI459624 testis .c 1 to 828 1 to 824       824/824
(100 %)
11 diff
(98.7 %id)
BF980096 testis .c 538 to 1251 734 to 18   tiling clone, fully sequenced,   717/734
(97 %)
2 diff
(99.8 %id)
AA194978 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 969 to 1391 1 to 422   tiling clone,   422/554
(76 %)
4 diff
(99.3 %id)
AA463375 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 969 to 1453 1 to 485   tiling clone,   485/488
(99 %)
9 diff
(98.2 %id)
AA195069 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1388 to 1994 607 to 1   tiling clone,   607/831
(73 %)
16 diff
(98.1 %id)
BP380463   .d 1 to 741 1 to 738 G50X G52X G63R G64X R66X ... tiling clone,   738/744
(99 %)
19 diff
(97.5 %id)
DA964024 stomach .d 5 to 487 2 to 484   tiling clone, capped   483/483
(100 %)
0 diff
(100 %id)
CB996864 placenta, pre-eclamptic placenta .e 1 to 584 28 to 611   tiling clone,   584/846
(69 %)
16 diff
(98.2 %id)
AL710846 human skeletal muscle .e 4 to 718 1 to 713   tiling clone,   713/713
(100 %)
5 diff
(99.3 %id)
BP242755 Liver .e 5 to 485 1 to 481       481/567
(84 %)
13 diff
(97.8 %id)
DB084147 testis .f-u 1 to 568 2 to 569 L99Q tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
CF141131 CNCAP(3)T-225 cell line, Prostate .g 1 to 402 7 to 408   tiling clone,   402/408
(98 %)
1 diff
(99.8 %id)
TI_154171756   .g 1 to 602 77 to 681 P102X G135X tiling clone,   603/861
(70 %)
9 diff
(99.0 %id)
DN994615 brain, whole brain .h 1 to 548 11 to 558 S66H tiling clone,   550/558
(98 %)
6 diff
(99.0 %id)
DB495561 hypothalamus .h 1 to 506 2 to 507       507/507
(100 %)
3 diff
(99.5 %id)
DB499990 hypothalamus .h 1 to 480 2 to 481       481/481
(100 %)
2 diff
(99.6 %id)
DB500197 hypothalamus .h 1 to 499 2 to 500       500/500
(100 %)
2 diff
(99.6 %id)
DB504830 hypothalamus .h 1 to 479 2 to 480       480/480
(100 %)
1 diff
(99.8 %id)
DB505108 hypothalamus .h 1 to 454 2 to 455   tiling clone,   455/455
(100 %)
1 diff
(99.8 %id)
BM152764 leukopheresis .h 3 to 422 1 to 420       420/423
(99 %)
6 diff
(98.6 %id)
CN274678 embryonic stem cells, DMSO-treated H9 cellline .h 217 to 525 1 to 310   tiling clone,   310/310
(100 %)
2 diff
(99.4 %id)
BQ304942 breast .i 1 to 230 243 to 8 T5D D6* tiling clone,   236/245
(96 %)
2 diff
(99.2 %id)
DA005223   .j 1 to 568 2 to 570 exact tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
DB074899 testis .k-u 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
1 diff
(99.9 %id)
AV753246 Pituitary .k-u 292 to 820 1 to 522 L7F N8G G9A A10P P11L ... tiling clone,   522/525
(99 %)
24 diff
(95.5 %id)
CF272361 Brain glioblastoma .l-u 1 to 712 1 to 723 H9R S31G T35A M37V tiling clone,   723/889
(81 %)
25 diff
(97.2 %id)
AI417628 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 37 to 646 608 to 5       604/612
(98 %)
0 diff
(100 %id)
BF378371 uterus .l-u 115 to 467 117 to 468       352/468
(75 %)
6 diff
(98.8 %id)
BQ006164 Chondrosarcoma, Left Pelvis .l-u 124 to 643 538 to 19   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 520/520
(100 %)
2 diff
(99.7 %id)
BE220414 carcinoid, lung .l-u 143 to 613 1 to 471   tiling clone, Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
AA911449 carcinoid, lung .l-u 145 to 398 1 to 254     Submitted on the opposite strand 254/254
(100 %)
1 diff
(99.7 %id)
AW190816 adenocarcinoma, Pancreas .l-u 145 to 646 504 to 3       502/504
(99 %)
0 diff
(100 %id)
DB576088 hypothalamus .l-u 151 to 643 1 to 493     Submitted on the opposite strand 493/493
(100 %)
1 diff
(99.8 %id)
AA400309   .l-u 153 to 638 1 to 486   fully sequenced,   486/486
(100 %)
1 diff
(99.8 %id)
BX097156   .l-u 155 to 487 1 to 333       333/333
(100 %)
1 diff
(99.7 %id)
AA894549 carcinoid, lung .l-u 156 to 646 491 to 3       489/589
(83 %)
0 diff
(100 %id)
BG111700 Bone, osteosarcoma, cell line .l-u 156 to 643 1 to 487   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 487/487
(100 %)
2 diff
(99.6 %id)
AF086132   .l-u 162 to 643 1 to 482   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 482/482
(100 %)
1 diff
(99.8 %id)
W05705 lung .l-u 162 to 419 1 to 259       259/265
(97 %)
4 diff
(98.5 %id)
DB567684 hypothalamus .l-u 164 to 643 1 to 480     Submitted on the opposite strand 480/480
(100 %)
1 diff
(99.8 %id)
DB571138 hypothalamus .l-u 171 to 643 1 to 473     Submitted on the opposite strand 473/473
(100 %)
2 diff
(99.6 %id)
DB571343 hypothalamus .l-u 173 to 643 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
AI311298 2 pooled tumors (clear cell type), Kidney .l-u 173 to 646 479 to 6       474/479
(98 %)
0 diff
(100 %id)
DB576378 hypothalamus .l-u 179 to 643 1 to 465     Submitted on the opposite strand 465/465
(100 %)
1 diff
(99.8 %id)
AA315340 colon .l-u 181 to 621 8 to 449       442/449
(98 %)
9 diff
(98.0 %id)
AI338944 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 182 to 646 470 to 6       465/470
(98 %)
0 diff
(100 %id)
BU754032 placenta .l-u 185 to 643 476 to 18   AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 459/459
(100 %)
2 diff
(99.6 %id)
DB566620 hypothalamus .l-u 190 to 643 1 to 454     Submitted on the opposite strand 454/454
(100 %)
1 diff
(99.8 %id)
DB557028 hypothalamus .l-u 195 to 643 1 to 448     Submitted on the opposite strand 448/448
(100 %)
3 diff
(99.4 %id)
AI291862 carcinoid, lung .l-u 222 to 644 423 to 1       423/423
(100 %)
1 diff
(99.8 %id)
AA249684   .l-u 238 to 422 1 to 185       185/185
(100 %)
8 diff
(95.7 %id)
AI797423 colon .l-u 241 to 644 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
AA778595   .l-u 255 to 646 392 to 1       392/392
(100 %)
2 diff
(99.5 %id)
AI276205 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 262 to 706 445 to 1   tiling clone,   445/445
(100 %)
1 diff
(99.8 %id)
AI041002   .l-u 272 to 646 376 to 2       375/376
(99 %)
0 diff
(100 %id)
AA554465 colon, tumor .l-u 309 to 643 335 to 1       335/335
(100 %)
1 diff
(99.8 %id)
AA351701 brain .l-u 329 to 633 306 to 1       306/306
(100 %)
2 diff
(99.4 %id)
AA676914 liver and spleen .l-u 344 to 643 300 to 1       300/300
(100 %)
1 diff
(99.7 %id)
AA401564   .l-u 354 to 647 294 to 1   fully sequenced,   294/294
(100 %)
2 diff
(99.4 %id)
BI036642 nervous_tumor .l-u 369 to 597 249 to 21       229/270
(84 %)
0 diff
(100 %id)
FN098455 breast carcinoma .l-u 394 to 477 1 to 81       81/82
(98 %)
4 diff
(95.2 %id)
N74871 lung .l-u 441 to 643 203 to 1       203/203
(100 %)
1 diff
(99.6 %id)
BP245496 Kidney .m -9 to 569 1 to 582 L41P tiling clone,   582/582
(100 %)
9 diff
(98.5 %id)
AW341592 pooled .n-u 1 to 519 519 to 1 exact tiling clone,   519/519
(100 %)
3 diff
(99.5 %id)
BM792401 Ascites, stomach Gene HEATR3, variant not shown         Suspected internal deletion, this clone was ignored    
CN427705 embryonic stem cells, cell lines H1, H7, andH9 Gene HEATR3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AK289949 hippocampus Gene HEATR3, variant not shown         This clone was ignored    
AF462442 brain Gene HEATR3, variant not shown         Suspected internal deletion, this clone was ignored    
DA427129 colon Gene HEATR3, variant not shown       capped Suspected internal deletion, this clone was ignored    
AK000725   Gene HEATR3, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AA775543 heart Gene HEATR3, variant not shown         Suspected internal deletion, this clone was ignored    
BI092236 cervix Gene HEATR3, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j, .k-u, .l-u, .m, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C