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Gene CWC25TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
270 supporting clones for gene CWC25 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC397562 testis .a 1 to 567 1 to 567   tiling clone,   567/567
(100 %)
2 diff
(99.7 %id)
DC375938 brain .a 133 to 700 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC313680 amygdala .a 134 to 717 1 to 586       586/586
(100 %)
3 diff
(99.5 %id)
DC378353   .a 134 to 603 1 to 470       470/470
(100 %)
0 diff
(100 %id)
AL702597 human skeletal muscle .a 136 to 702 1 to 567       567/567
(100 %)
3 diff
(99.5 %id)
DC359850   .a 137 to 711 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC363558   .a 137 to 714 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
BG772283 testis .a 143 to 924 1 to 788       788/798
(98 %)
21 diff
(97.4 %id)
BI465271 testis .a 143 to 755 1 to 616       616/617
(99 %)
17 diff
(97.3 %id)
DA713262   .a 144 to 708 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BF686724 leiomyosarcoma cell line, uterus .a 145 to 727 1 to 587       587/616
(95 %)
11 diff
(98.3 %id)
BF971914 leiomyosarcoma cell line, uterus .a 145 to 798 1 to 657       657/954
(68 %)
14 diff
(98.6 %id)
BC008833 Uterus, leiomyosarcoma .a 146 to 2474 1 to 2329 exact tiling clone, available from MGC, AAA   2329/2329
(100 %)
0 diff
(100 %id)
NM_017748.3   .a 146 to 2474 1 to 2329 exact RefSeq, AAA   2329/2329
(100 %)
0 diff
(100 %id)
AL516395 brain, neuroblastoma, neuroblastoma cells .a 147 to 1091 1 to 939       939/939
(100 %)
17 diff
(98.2 %id)
BP372419 umbilical cord .a 149 to 727 1 to 580       580/582
(99 %)
2 diff
(99.7 %id)
DB456260 testis .a 151 to 616 1 to 466       466/466
(100 %)
0 diff
(100 %id)
DA908118   .a 151 to 715 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA202281 brain .a 152 to 713 2 to 565   capped   564/564
(100 %)
4 diff
(99.3 %id)
DB086199 testis .a 152 to 673 2 to 523   capped   522/522
(100 %)
3 diff
(99.5 %id)
FN051425 breast carcinoma .a 157 to 244 1 to 88       88/88
(100 %)
4 diff
(95.5 %id)
DA161661 amygdala .a 158 to 403 2 to 247   capped   246/246
(100 %)
0 diff
(100 %id)
FN053751 breast carcinoma .a 158 to 224 1 to 67       67/78
(85 %)
3 diff
(96.2 %id)
BU953942 mixed (pool of 40 RNAs) .a 158 to 487 1 to 330       330/330
(100 %)
3 diff
(99.1 %id)
DB101442 thymus .a 158 to 716 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB154069 thymus .a 158 to 751 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DA610329   .a 159 to 683 31 to 555   capped   525/554
(94 %)
9 diff
(98.4 %id)
DA000142   .a 160 to 849 2 to 692   capped   691/696
(99 %)
2 diff
(99.8 %id)
AL600171   .a 160 to 572 1 to 413       413/413
(100 %)
1 diff
(99.8 %id)
AL708264 human skeletal muscle .a 160 to 550 1 to 391       391/391
(100 %)
1 diff
(99.8 %id)
DW454981 Liver .a 160 to 316 18 to 174       157/177
(88 %)
2 diff
(98.9 %id)
BG541396 lung .a 160 to 736 1 to 599       570/796
(71 %)
29 diff
(96.4 %id)
BG568824 Liver .a 160 to 765 1 to 606       606/609
(99 %)
4 diff
(99.4 %id)
DA906640   .a 160 to 739 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
BP365429 lung .a 160 to 726 1 to 568       568/582
(97 %)
1 diff
(99.9 %id)
DB172178 kidney, tumor tissue .a 160 to 710 25 to 575   capped   551/574
(95 %)
7 diff
(98.8 %id)
BP197616 adrenal gland .a 161 to 743 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
AK225373 Kidney .a 161 to 2564 1 to 2403 L127F D129T M130W A131P S132A ... AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 2403/2403
(100 %)
1 diff
(100.0 %id)
CD687241 normal nasopharynx .a 161 to 582 23 to 444       422/444
(95 %)
7 diff
(98.5 %id)
DW414735 Liver .a 161 to 458 18 to 315       298/315
(94 %)
9 diff
(97.2 %id)
DW416501 Liver .a 161 to 452 18 to 309       292/309
(94 %)
6 diff
(98.1 %id)
DW433522 Liver .a 161 to 405 18 to 262       245/262
(93 %)
7 diff
(97.4 %id)
DW442057 Liver .a 161 to 379 18 to 236       219/236
(92 %)
7 diff
(97.1 %id)
DW448578 Liver .a 161 to 349 19 to 207       189/207
(91 %)
6 diff
(97.2 %id)
BP252513 Kidney .a 161 to 744 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BF678573 Prostate .a 161 to 639 1 to 485       482/786
(61 %)
23 diff
(97.1 %id)
BP298692   .a 161 to 743 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP348701 brain .a 161 to 741 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP348732 brain .a 161 to 742 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA037782   .a 162 to 723 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA202483 brain .a 162 to 739 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA274039 corpus callosum .a 162 to 715 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA279718 corpus callosum .a 162 to 654 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA291819 hippocampus .a 162 to 748 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA352445 substantia nigra .a 162 to 739 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA375680 thalamus .a 162 to 639 2 to 480   capped   479/479
(100 %)
1 diff
(99.8 %id)
AL553742 placenta, Placenta Cot 25-normalized .a 162 to 1122 14 to 964       951/999
(95 %)
21 diff
(97.9 %id)
DA454318 tongue, tumor tissue .a 162 to 750 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA474059   .a 162 to 725 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA516759 brain .a 162 to 718 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA539302 Kidney .a 162 to 743 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA557243   .a 162 to 707 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA562491 heart .a 162 to 631 2 to 471   capped   470/470
(100 %)
2 diff
(99.6 %id)
DA588327 lung .a 162 to 723 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA590770 lung .a 162 to 613 2 to 456   capped   453/455
(99 %)
2 diff
(99.6 %id)
DA747300   .a 162 to 739 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA785106 brain .a 162 to 760 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
DA867920 Prostate .a 162 to 694 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA905245   .a 162 to 724 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA925986 small intestine .a 162 to 734 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA936466 Spleen .a 162 to 752 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
DA939224 Spleen .a 162 to 772 2 to 612   capped   611/611
(100 %)
2 diff
(99.7 %id)
DB032714 testis .a 162 to 704 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB033094 testis .a 162 to 740 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB048797 testis .a 162 to 727 2 to 567   capped   566/569
(99 %)
2 diff
(99.7 %id)
DB048849 testis .a 162 to 741 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DB102322 thymus .a 162 to 716 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB109401 thymus .a 162 to 748 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB111637 thymus .a 162 to 733 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DB246276 uterus, tumor tissue .a 162 to 733 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DB249973 uterus .a 162 to 715 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB273315 uterus .a 162 to 703 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
BP383397 ilea mucosa .a 163 to 569 1 to 406       406/406
(100 %)
5 diff
(98.8 %id)
DA083132 cerebellum .a 164 to 730 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA819027   .a 164 to 720 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
DB247111   .a 164 to 714 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AA558677 bone marrow, stem cells .a 167 to 493 330 to 5       326/330
(98 %)
0 diff
(100 %id)
BU598774 mixed (pool of 40 RNAs) .a 169 to 833 1 to 662       666/691
(96 %)
13 diff
(98.2 %id)
FN144850 breast carcinoma .a 170 to 278 107 to 1     Submitted on the opposite strand 107/111
(96 %)
4 diff
(96.4 %id)
DA715317   .a 171 to 553 2 to 385   capped   384/384
(100 %)
1 diff
(99.8 %id)
DA080233 cerebellum .a 172 to 733 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA946298 Spleen .a 173 to 716 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB132900 thymus .a 173 to 734 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB146107 thymus .a 173 to 727 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB164234 thymus .a 173 to 758 2 to 590   capped   589/589
(100 %)
4 diff
(99.4 %id)
DB248473 uterus .a 173 to 796 2 to 627   capped   626/635
(98 %)
2 diff
(99.7 %id)
DA442905 tongue, tumor tissue .a 174 to 740 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA992246 synovial membrane tissue from rheumatioidarthritis .a 174 to 733 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DN991648 brain, whole brain .a 177 to 842 8 to 672       665/672
(98 %)
7 diff
(99.0 %id)
CX759917 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 178 to 760 1 to 584       584/839
(69 %)
17 diff
(98.0 %id)
BE567337 bladder, carcinoma, cell line .a 180 to 797 1 to 619       619/763
(81 %)
17 diff
(97.8 %id)
BP238906 Liver .a 181 to 781 1 to 601       601/601
(100 %)
4 diff
(99.4 %id)
AK000298   .a 182 to 2190 1 to 2006 exact available from FLJ, AAA   2006/2006
(100 %)
5 diff
(99.8 %id)
DA263582 caudate nucleus .a 182 to 735 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AL543506 placenta, Placenta Cot 25-normalized .a 182 to 1155 1 to 964       964/976
(98 %)
13 diff
(98.7 %id)
DB032921 testis .a 182 to 487 2 to 307   capped   306/306
(100 %)
0 diff
(100 %id)
AL520342 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 185 to 1197 1 to 1011       1011/1011
(100 %)
15 diff
(98.6 %id)
DB451524 testis .a 188 to 684 1 to 497       497/498
(99 %)
1 diff
(99.8 %id)
AL705157 human skeletal muscle .a 190 to 756 1 to 567       567/569
(99 %)
2 diff
(99.7 %id)
DA910504   .a 192 to 734 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
AW239011 lung, cell line .a 199 to 460 1 to 262       262/262
(100 %)
18 diff
(93.2 %id)
AW137884   .a 201 to 597 14 to 411     Submitted on the opposite strand 398/411
(96 %)
7 diff
(98.3 %id)
BI913824 brain .a 206 to 971 1 to 770       772/771
(100 %)
18 diff
(97.7 %id)
TI_57243383   .a 206 to 971 32 to 801       772/802
(96 %)
24 diff
(97.1 %id)
AJ706628 bone marrow .a 214 to 412 1 to 199       199/199
(100 %)
4 diff
(98.0 %id)
BF088895 head_neck .a 217 to 626 416 to 3       414/444
(93 %)
7 diff
(98.5 %id)
AI469066 Kidney .a 217 to 648 432 to 1       432/432
(100 %)
4 diff
(99.1 %id)
CD558451 White Matter .a 219 to 923 27 to 736       710/889
(79 %)
20 diff
(97.8 %id)
AA306510   .a 228 to 639 1 to 412       412/412
(100 %)
4 diff
(99.1 %id)
AI239971 pooled .a 245 to 700 1 to 456     Submitted on the opposite strand 456/456
(100 %)
0 diff
(100 %id)
AI684511 pooled .a 245 to 688 1 to 444     Submitted on the opposite strand 444/444
(100 %)
0 diff
(100 %id)
AA075970 Pancreas .a 246 to 625 1 to 383       385/383
(100 %)
10 diff
(97.4 %id)
BX480128   .a 247 to 631 1 to 385       385/385
(100 %)
1 diff
(99.8 %id)
AA766299 germinal center B cell .a 247 to 706 1 to 458     Submitted on the opposite strand 458/459
(99 %)
9 diff
(98.1 %id)
AA971943 pooled .a 248 to 613 1 to 365     Submitted on the opposite strand 367/365
(100 %)
5 diff
(98.7 %id)
AI807088 pooled .a 248 to 490 1 to 243     Submitted on the opposite strand 243/252
(96 %)
3 diff
(98.9 %id)
AA320343 adipose tissue, white .a 254 to 478 1 to 225       225/225
(100 %)
3 diff
(98.7 %id)
AW964532   .a 254 to 723 102 to 571       470/754
(62 %)
12 diff
(98.5 %id)
ES307941 beard hair, skin .a 272 to 423 1 to 152       152/152
(100 %)
0 diff
(100 %id)
BC003085 Eye, retinoblastoma .a 279 to 796 1 to 518   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 518/587
(88 %)
0 diff
(100 %id)
BE256253 eye, retinoblastoma .a 298 to 796 1 to 501   available from MGC,   501/506
(99 %)
3 diff
(99.5 %id)
AW964531   .a 316 to 651 59 to 395       338/395
(85 %)
22 diff
(94.5 %id)
EC506259 Prostate .a 338 to 428 1 to 90       90/90
(100 %)
2 diff
(97.8 %id)
FN164000 breast carcinoma .a 353 to 416 8 to 71       64/71
(90 %)
8 diff
(88.8 %id)
BQ879312 dorsal root ganglia .a 380 to 1349 1 to 973       973/976
(99 %)
33 diff
(96.7 %id)
AA767583 germinal center B cell .a 400 to 669 1 to 269     Submitted on the opposite strand 269/269
(100 %)
2 diff
(99.3 %id)
AI497970 anaplastic oligodendroglioma, brain .a 400 to 820 421 to 1       421/421
(100 %)
0 diff
(100 %id)
FN153316 breast carcinoma .a 403 to 500 99 to 2     Submitted on the opposite strand 98/99
(98 %)
0 diff
(100 %id)
FN047920 breast carcinoma .a 417 to 481 64 to 2     Submitted on the opposite strand 63/65
(96 %)
0 diff
(100 %id)
BP317781 pericardium .a 454 to 1038 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
CN427237 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 469 to 1252 1 to 784       784/784
(100 %)
1 diff
(99.9 %id)
DA831055 placenta .a 494 to 1169 2 to 680   capped   679/679
(100 %)
7 diff
(99.0 %id)
BF753454 colon .a 550 to 725 1 to 176       176/176
(100 %)
8 diff
(95.5 %id)
BP254667 Kidney .a 777 to 1358 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BY997411   .a 781 to 1407 13 to 639       627/639
(98 %)
6 diff
(99.1 %id)
BM790379 Ascites, stomach .a 891 to 1378 1 to 488       488/488
(100 %)
21 diff
(95.7 %id)
BG818021 anaplastic oligodendroglioma with 1p/19qloss, brain .a 894 to 1576 1 to 689       689/690
(99 %)
10 diff
(98.6 %id)
BM852783 Ascites, stomach .a 1055 to 1497 1 to 443       443/443
(100 %)
11 diff
(97.6 %id)
AL576681 placenta, Placenta Cot 25-normalized .a 1173 to 2159 988 to 1       988/988
(100 %)
7 diff
(99.3 %id)
AL520341 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 1204 to 2160 948 to 1       948/948
(100 %)
18 diff
(98.2 %id)
AL543481 placenta, Placenta Cot 25-normalized .a 1212 to 2137 945 to 20       926/945
(97 %)
7 diff
(99.3 %id)
BF082747 breast .a 1287 to 1821 535 to 1       535/535
(100 %)
0 diff
(100 %id)
AL516394 brain, neuroblastoma, neuroblastoma cells .a 1297 to 2075 831 to 54       778/831
(93 %)
19 diff
(97.8 %id)
T49024 placenta .a 1297 to 1586 1 to 303       303/303
(100 %)
20 diff
(93.4 %id)
BU168115 melanotic melanoma, cell line, skin .a 1300 to 2130 1 to 835       835/853
(97 %)
8 diff
(99.1 %id)
BU196533 melanotic melanoma, cell line, skin .a 1300 to 2130 1 to 837       837/891
(93 %)
11 diff
(98.8 %id)
BQ676431 melanotic melanoma, cell line, skin .a 1300 to 2010 1 to 713       713/910
(78 %)
12 diff
(98.7 %id)
BU839310 melanotic melanoma, cell line, skin .a 1300 to 2145 1 to 851       851/894
(95 %)
13 diff
(98.6 %id)
BQ677740 melanotic melanoma, cell line, skin .a 1301 to 1962 78 to 745       667/1116
(59 %)
30 diff
(97.4 %id)
Z36761   .a 1340 to 1737 1 to 403       403/405
(99 %)
6 diff
(98.6 %id)
BP428578   .a 1402 to 1776 1 to 375       375/375
(100 %)
5 diff
(98.7 %id)
TI_149302923   .a 1403 to 2193 848 to 64   AAA   785/938
(83 %)
7 diff
(99.3 %id)
BM504000 Pancreas, Purified pancreatic islet .a 1409 to 1904 1 to 496       496/496
(100 %)
0 diff
(100 %id)
BP422681 small intestine .a 1412 to 1883 1 to 472     Submitted on the opposite strand 472/472
(100 %)
1 diff
(99.8 %id)
BM981029 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1462 to 2193 749 to 19   AAA   731/738
(99 %)
1 diff
(99.9 %id)
CD370506 Alveolar Macrophage, lung .a 1462 to 2198 750 to 14   AAA   737/745
(98 %)
3 diff
(99.6 %id)
TI_149292611   .a 1499 to 2193 777 to 84   AAA   694/694
(100 %)
2 diff
(99.8 %id)
BQ774726 Bone, Human Chondrosarcoma Cell Line .a 1505 to 2193 707 to 19   AAA   689/689
(100 %)
1 diff
(99.9 %id)
CA420119 Bone, Human Chondrosarcoma Cell Line .a 1524 to 2193 688 to 19   AAA   670/670
(100 %)
1 diff
(99.9 %id)
BM974688 lung .a 1531 to 2193 680 to 19   AAA   662/662
(100 %)
1 diff
(99.9 %id)
BM994950 Chondrosarcoma, Left Pubic Bone .a 1532 to 2193 679 to 19   AAA   661/661
(100 %)
4 diff
(99.4 %id)
DW431723 Liver .a 1567 to 1818 17 to 268       252/268
(94 %)
11 diff
(95.9 %id)
DW462380 Liver .a 1567 to 1919 17 to 369       353/369
(95 %)
6 diff
(98.4 %id)
BU622366 cell lines, Chondrosarcoma .a 1567 to 2193 646 to 19   AAA   628/628
(100 %)
2 diff
(99.7 %id)
AW293942   .a 1568 to 2105 555 to 18   AAA   538/538
(100 %)
4 diff
(99.3 %id)
BG928513 cartilage .a 1602 to 2193 82 to 673   AAA   592/605
(97 %)
6 diff
(99.1 %id)
AI138994   .a 1638 to 2196 559 to 1       559/559
(100 %)
2 diff
(99.7 %id)
AW341663 pooled .a 1657 to 2100 444 to 2       443/444
(99 %)
0 diff
(100 %id)
CK822768 Pancreas, Purified pancreatic islet .a 1663 to 2175 513 to 1     Submitted on the opposite strand 513/513
(100 %)
0 diff
(100 %id)
BM510147 Pancreas, Purified pancreatic islet .a 1665 to 2192 528 to 1       528/528
(100 %)
0 diff
(100 %id)
AW973859   .a 1677 to 2197 528 to 1     Submitted on the opposite strand 528/529
(99 %)
49 diff
(90.8 %id)
AI452549 pooled .a 1686 to 2197 512 to 1       512/512
(100 %)
0 diff
(100 %id)
AA994881 pooled .a 1697 to 2100 404 to 2       403/404
(99 %)
0 diff
(100 %id)
DB294890   .a 1700 to 2193 493 to 1       493/522
(94 %)
14 diff
(97.4 %id)
BM903708 ovary (pool of 3) .a 1714 to 2193 1 to 480   AAA   480/480
(100 %)
7 diff
(98.6 %id)
AW341728 pooled .a 1731 to 2195 465 to 1       465/465
(100 %)
5 diff
(99.0 %id)
BG236139 blood, lymphocyte .a 1764 to 2193 441 to 12   AAA   430/430
(100 %)
0 diff
(100 %id)
AI139783   .a 1781 to 2193 428 to 16   AAA   413/413
(100 %)
1 diff
(99.8 %id)
AI024455   .a 1829 to 2196 368 to 1       368/419
(87 %)
1 diff
(99.8 %id)
AA594305 colon, colon tumor RER+ .a 1831 to 2198 392 to 25   AAA   368/368
(100 %)
1 diff
(99.8 %id)
EC579152 Prostate .a 1840 to 1942 103 to 1       103/103
(100 %)
0 diff
(100 %id)
AA969252 pooled .a 1865 to 2197 333 to 1       333/333
(100 %)
0 diff
(100 %id)
FN099119 breast carcinoma .a 1914 to 2002 87 to 1     Submitted on the opposite strand 87/88
(98 %)
2 diff
(97.8 %id)
BM929297 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1931 to 2198 1 to 268   AAA   268/268
(100 %)
0 diff
(100 %id)
EC552533 Prostate .a 1939 to 2035 1 to 97       97/97
(100 %)
0 diff
(100 %id)
BQ083631 stomach .a 1944 to 2193 1 to 249   AAA   249/249
(100 %)
5 diff
(98.0 %id)
AW582833   .a 1953 to 2162 210 to 1       210/210
(100 %)
1 diff
(99.6 %id)
FN045913 breast carcinoma .a 1953 to 2055 1 to 103       103/103
(100 %)
0 diff
(100 %id)
AI434661 lymph node, lymphoma, follicular mixed small and largecell .a 1959 to 2197 239 to 1       239/239
(100 %)
0 diff
(100 %id)
AU185898 skin .a 1975 to 2192 217 to 1       217/217
(100 %)
1 diff
(99.6 %id)
DB376513 placenta .a 2027 to 2564 531 to 1       531/587
(90 %)
22 diff
(96.3 %id)
AA076133 Pancreas .a 2037 to 2475 441 to 1       441/441
(100 %)
2 diff
(99.6 %id)
AA918382 Kidney .a 2068 to 2193 126 to 1       126/126
(100 %)
1 diff
(99.3 %id)
T49025 placenta .a 2145 to 2449 306 to 1       306/306
(100 %)
1 diff
(99.7 %id)
BG545146 lung .a 2313 to 2820 1 to 512       512/514
(99 %)
7 diff
(98.7 %id)
BG260135 bladder, transitional cell papilloma, cell line .a 2389 to 3174 1 to 795   tiling clone,   795/898
(88 %)
20 diff
(97.8 %id)
DB516991 testis .a 2753 to 3215 1 to 463   tiling clone, Submitted on the opposite strand 463/464
(99 %)
1 diff
(99.8 %id)
AI206387 placenta .a 2801 to 3234 441 to 7       435/441
(98 %)
0 diff
(100 %id)
CR748127 liver and spleen .a 2826 to 3224 206 to 606   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 401/606
(66 %)
6 diff
(99.1 %id)
H79861.
matches multiple genes
liver and spleen .a 2826 to 3226 403 to 2     Suspected internal deletion, this clone was ignored, also hits gene MDM2 402/447
(89 %)
0 diff
(100 %id)
AW612704 carcinoid, lung .a 2844 to 3234 400 to 10   tiling clone,   391/462
(84 %)
0 diff
(100 %id)
BE046092 lymph node, lymphoma, follicular mixed small and largecell .a 2876 to 3226 351 to 1       351/351
(100 %)
1 diff
(99.8 %id)
AI206389 placenta .a 2878 to 3234 364 to 7       358/364
(98 %)
0 diff
(100 %id)
AI201047   .a 2889 to 3224 349 to 14   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 336/336
(100 %)
0 diff
(100 %id)
AW182365 pooled .a 2909 to 3227 319 to 1       319/319
(100 %)
0 diff
(100 %id)
AW293223   .a 2924 to 3224 318 to 18   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 301/314
(95 %)
0 diff
(100 %id)
CD724222 eye, lacrimal gland .a 2962 to 3216 1 to 255   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 255/255
(100 %)
0 diff
(100 %id)
BP396677 pancreatic islet .a 2980 to 3227 1 to 248     Submitted on the opposite strand 248/250
(99 %)
2 diff
(99.2 %id)
AI218596 pooled .a 3038 to 3218 182 to 2       181/182
(99 %)
0 diff
(100 %id)
CB243394 Human Lung Epithelial cells, lung .a 3052 to 3224 191 to 19   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 173/194
(89 %)
3 diff
(98.5 %id)
C01349   .a 3105 to 3223 1 to 119       119/119
(100 %)
0 diff
(100 %id)
AK296115 thalamus .b 1 to 1890 5 to 1894 exact tiling clone,   1894/1894
(100 %)
1 diff
(100.0 %id)
DC339983 thalamus .b 1 to 554 5 to 559       559/559
(100 %)
1 diff
(99.9 %id)
BP313372 mammary gland .b 5 to 591 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DC397361 testis .b 224 to 770 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC338368 subthalamic nucleus .b 325 to 869 1 to 545       545/545
(100 %)
0 diff
(100 %id)
TI_227714883   .b 1401 to 2418 1091 to 89   AAA   1003/1008
(99 %)
19 diff
(98.2 %id)
CD516884 White Matter .b 1503 to 2374 1 to 883   tiling clone,   883/890
(99 %)
24 diff
(97.4 %id)
BG400675 Kidney .b 1615 to 2404 1 to 789       789/794
(99 %)
13 diff
(98.4 %id)
BG028387 Bone, osteosarcoma, cell line .b 1678 to 2241 1 to 587       587/971
(60 %)
34 diff
(96.5 %id)
TI_149272469   .b 1699 to 2511 901 to 85   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 817/1029
(79 %)
12 diff
(98.9 %id)
BQ007864 Chondrosarcoma, Left Pelvis .b 1712 to 2421 728 to 19   AAA   710/710
(100 %)
3 diff
(99.6 %id)
TI_227714981   .b 1736 to 2546 861 to 52   tiling clone,   856/1075
(79 %)
12 diff
(98.9 %id)
BE880344 large cell carcinoma, undifferentiated, lung .b 1775 to 2521 1 to 736       736/808
(91 %)
24 diff
(97.1 %id)
CB140934 Liver .b 1821 to 2350 1 to 530       530/530
(100 %)
0 diff
(100 %id)
CD365411 Alveolar Macrophage, lung .b 1902 to 2511 626 to 17   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 610/610
(100 %)
2 diff
(99.7 %id)
TI_153989686   .b 1906 to 2421 607 to 92   AAA   516/516
(100 %)
8 diff
(98.5 %id)
CB529200 Aveolar Macrophage, lung .b 1911 to 2511 619 to 19   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 601/601
(100 %)
2 diff
(99.7 %id)
AI524355 Prostate .b 1945 to 2421 477 to 1       477/477
(100 %)
0 diff
(100 %id)
AW205797   .b 1960 to 2421 479 to 18   AAA   462/462
(100 %)
1 diff
(99.8 %id)
AW051977 pooled .b 1965 to 2420 456 to 1       456/456
(100 %)
1 diff
(99.8 %id)
CD724020 eye, lacrimal gland .b 1977 to 2579 1 to 605   tiling clone,   605/605
(100 %)
2 diff
(99.7 %id)
AA994573   .b 1988 to 2422 437 to 3       435/437
(99 %)
0 diff
(100 %id)
AW473745 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2027 to 2511 485 to 1       485/485
(100 %)
0 diff
(100 %id)
AI564637 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2030 to 2421 392 to 1       392/392
(100 %)
0 diff
(100 %id)
BF435431 pooled .b 2050 to 2516 467 to 1       467/467
(100 %)
0 diff
(100 %id)
AA928647 pooled germ cell tumors .b 2063 to 2421 359 to 1       359/359
(100 %)
0 diff
(100 %id)
BI489901 pooled brain, lung, testis .b 2075 to 2421 1 to 346   AAA   346/346
(100 %)
1 diff
(99.8 %id)
TI_43960584   .b 2075 to 2421 58 to 403   AAA   346/403
(85 %)
6 diff
(98.6 %id)
AI810027 pooled .b 2076 to 2424 377 to 12   AAA   366/366
(100 %)
15 diff
(96.0 %id)
AI565056 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2223 to 2515 292 to 1       292/292
(100 %)
2 diff
(99.4 %id)
AA933683 pooled germ cell tumors .b 2225 to 2421 197 to 1       197/197
(100 %)
0 diff
(100 %id)
DC404598 thymus .c -9 to 779 1 to 789 E38G K185N H186T K187R K188N ... tiling clone,   789/789
(100 %)
7 diff
(99.2 %id)
BX456964 thymus .c 2 to 848 1 to 846 E43D L44R R45E E46K E47R ... tiling clone,   846/852
(99 %)
18 diff
(97.9 %id)
BP366639 thymus .c 365 to 941 1 to 577       577/577
(100 %)
4 diff
(99.4 %id)
BM700672 eye, eye anterior segment .c 650 to 1181 1 to 532   tiling clone,   532/532
(100 %)
2 diff
(99.7 %id)
BX456963 thymus .c 1326 to 2181 858 to 1   tiling clone,   858/858
(100 %)
50 diff
(94.2 %id)
DC426834 thymus .c 1713 to 2215 506 to 1   tiling clone,   506/507
(99 %)
20 diff
(96.1 %id)
BM672132 eye, eye anterior segment .c 2010 to 2496 505 to 19   tiling clone, AAA   487/487
(100 %)
0 diff
(100 %id)
AK302983 testis .d 1 to 1127 1 to 1127 exact tiling clone,   1127/1127
(100 %)
0 diff
(100 %id)
DC404006 testis .d 1 to 577 1 to 577       577/577
(100 %)
0 diff
(100 %id)
FN166337 breast carcinoma .d 10 to 95 1 to 87       87/92
(94 %)
4 diff
(95.7 %id)
DC390709 Spleen .d 540 to 1091 1 to 552       552/552
(100 %)
0 diff
(100 %id)
CN427236 embryonic stem cells, DMSO-treated H9 cellline .e 1 to 610 1 to 611   tiling clone,   611/611
(100 %)
1 diff
(99.9 %id)
BP371098 testis .e 57 to 658 1 to 582 R64C E65W A66G G67A S68P ...     522/582
(89 %)
10 diff
(98.3 %id)
R34670 whole brain .f 1 to 339 1 to 343   tiling clone,   343/466
(73 %)
9 diff
(98.1 %id)
BP251554 hippocampus .f 99 to 679 1 to 582 exact tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
BM919997 pooled pancreas and spleen .g 1 to 941 1 to 950 exact tiling clone,   950/995
(95 %)
9 diff
(99.1 %id)
AW806476 stomach .g 841 to 1285 1 to 444   tiling clone,   444/448
(99 %)
5 diff
(98.9 %id)
AK316077 subthalamic nucleus .h 1 to 1161 1 to 1161 exact tiling clone,   1161/1161
(100 %)
1 diff
(100.0 %id)
CU452216 epidermis .h 419 to 1084 679 to 14     Submitted on the opposite strand 666/680
(97 %)
1 diff
(99.9 %id)
CK430975 eye, lacrimal gland .h 450 to 1094 1 to 645       645/645
(100 %)
0 diff
(100 %id)
BM545688 ovary (pool of 3) .i-u 1 to 696 115 to 813 W37R tiling clone,   699/1130
(61 %)
14 diff
(98.8 %id)
N41912 placenta .i-u 35 to 298 1 to 265   fully sequenced,   265/265
(100 %)
1 diff
(99.7 %id)
N32572 placenta .i-u 268 to 783 521 to 1   tiling clone, fully sequenced,   521/521
(100 %)
8 diff
(98.5 %id)
DA675194   .j-u 1 to 534 2 to 535 exact tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
BF084619 colon Gene CWC25, variant not shown         Suspected internal deletion, this clone was ignored    
CR749362 Liver Gene CWC25, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
BP233231 muscle Gene CWC25, variant not shown         Suspected internal deletion, this clone was ignored    
AV647822 corresponding non cancerous liver tissue Gene CWC25, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV723180 hypothalamus Gene CWC25, variant not shown         Suspected internal deletion, this clone was ignored    
AI277856 placenta Gene CWC25, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI