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Gene ZNF642TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
28 supporting clones for gene ZNF642 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK122618   .a 1 to 2103 2 to 2104 Y603* tiling clone, available from FLJ,   2104/2104
(100 %)
2 diff
(100.0 %id)
NM_198494.2   .a 1 to 2157 2 to 2158 exact RefSeq, AAA   2158/2158
(100 %)
0 diff
(100 %id)
TI_2194645744   .a 730 to 1860 1219 to 71       1149/1315
(87 %)
0 diff
(100 %id)
TI_2194643116   .a 763 to 1860 1164 to 72       1093/1261
(86 %)
0 diff
(100 %id)
TI_2194644487   .a 789 to 1860 1200 to 142   tiling clone,   1059/1258
(84 %)
0 diff
(100 %id)
BG251945 adenocarcinoma, cell line, Liver .a 1084 to 1858 1 to 766       766/941
(81 %)
16 diff
(98.3 %id)
FN128117 breast carcinoma .a 1107 to 1214 105 to 1     Submitted on the opposite strand 105/105
(100 %)
3 diff
(97.2 %id)
BM725287 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1161 to 1543 1 to 384   fully sequenced,   384/384
(100 %)
2 diff
(99.5 %id)
AI925094 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 1246 to 1478 15 to 247     Submitted on the opposite strand 233/247
(94 %)
6 diff
(97.6 %id)
CB241064 Human Lung Epithelial cells, lung .a 1416 to 2096 699 to 19   AAA   681/681
(100 %)
1 diff
(99.9 %id)
BM677727 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1513 to 2157 663 to 19   fully sequenced, AAA   645/645
(100 %)
0 diff
(100 %id)
BF965225 muscle (skeletal) .a 1515 to 2085 1 to 572       572/576
(99 %)
3 diff
(99.5 %id)
AJ710572 heart .a 1551 to 2088 550 to 13     Submitted on the opposite strand 538/550
(97 %)
0 diff
(100 %id)
AI653297 pooled germ cell tumors .a 1555 to 2158 605 to 2   tiling clone,   604/605
(99 %)
0 diff
(100 %id)
AA948585 pooled .a 1746 to 2108 363 to 1       363/363
(100 %)
1 diff
(99.8 %id)
DA687888   .b 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
BC144174 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 254 to 1863 1 to 1610   tiling clone,   1610/1610
(100 %)
3 diff
(99.9 %id)
TI_2194645365   .b 264 to 1337 60 to 1131       1072/1279
(83 %)
25 diff
(98.1 %id)
DB323019   .b 1568 to 2106 540 to 1   tiling clone,   540/541
(99 %)
3 diff
(99.5 %id)
BI463617 testis .c 1 to 541 1 to 540       540/540
(100 %)
7 diff
(98.8 %id)
BC041873 testis .c 6 to 2797 1 to 2791 T159A tiling clone, available from MGC, AAA   2791/2791
(100 %)
5 diff
(99.9 %id)
CV374692 head_neck .c 1154 to 1580 1 to 437       435/437
(99 %)
9 diff
(98.0 %id)
CX871163 embryonic stem .c 1333 to 2050 1 to 717   tiling clone,   717/717
(100 %)
1 diff
(99.9 %id)
TI_2194644489   .c 1409 to 2566 15 to 1164       1150/1263
(91 %)
19 diff
(98.5 %id)
BM987592 mixed .d 1 to 487 9 to 495   tiling clone, Submitted on the opposite strand 487/495
(98 %)
6 diff
(98.8 %id)
TI_2194643115   .d 340 to 1513 59 to 1216 A149D T150L Y151K E152S N153K ... tiling clone,   1158/1266
(91 %)
62 diff
(95.2 %id)
CV364768 head_neck .d 802 to 1028 238 to 9   tiling clone, AAA Submitted on the opposite strand 230/245
(93 %)
0 diff
(100 %id)
DN992336 brain, whole brain .e 1 to 632 9 to 640 exact tiling clone,   640/640
(100 %)
5 diff
(99.3 %id)
BC078148 Pancreas, epithelioid carcinoma .f 1 to 543 1 to 543 exact tiling clone, available from MGC, AAA   543/543
(100 %)
0 diff
(100 %id)
BU164774 epithelioid carcinoma, Pancreas .f 2 to 543 1 to 542   available from MGC, AAA   542/542
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC