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Gene CGNL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
212 supporting clones for gene CGNL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA272287 caudate nucleus .a 1 to 560 2 to 561   tiling clone, capped   560/561
(99 %)
1 diff
(99.9 %id)
BC118919 PCR rescued clones .a 113 to 6427 1 to 6313 T380P K446S L447C Q448R G449E ... tiling clone,   6313/6313
(100 %)
7 diff
(99.9 %id)
TI_891530069   .a 2998 to 4118 1152 to 42       1111/1275
(87 %)
11 diff
(99.2 %id)
TI_1242419100   .a 3065 to 4119 1103 to 63       1041/1236
(84 %)
19 diff
(98.5 %id)
BF368889 placenta_normal .a 3633 to 4005 373 to 1       373/373
(100 %)
3 diff
(99.2 %id)
AY610514   .b 1 to 4532 1 to 4534 S239G F278I S305P T380P T511A ... tiling clone,   4534/4534
(100 %)
18 diff
(99.7 %id)
AL699630 human skeletal muscle .b 2 to 575 10 to 583       574/574
(100 %)
1 diff
(99.9 %id)
AK056673 brain .c 1 to 2726 2 to 2727   tiling clone, available from FLJ,   2727/2727
(100 %)
4 diff
(99.9 %id)
AK307410 trachea .c 1 to 3045 2 to 3046       3046/3046
(100 %)
3 diff
(100.0 %id)
DC415862 trachea .c 1 to 564 2 to 566       566/566
(100 %)
2 diff
(99.7 %id)
DA235294 brain .c 1 to 297 2 to 298   capped   297/586
(50 %)
4 diff
(99.4 %id)
DA769160 brain .c 1 to 532 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DB038584 testis .c 1 to 577 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
AY274808   .c 2 to 7211 1 to 7210 exact tiling clone,   7210/7210
(100 %)
0 diff
(100 %id)
BC030995 Kidney .c 2 to 1982 1 to 1981   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1981/2015
(98 %)
4 diff
(99.9 %id)
NM_032866.3   .c 2 to 7218 1 to 7217 exact RefSeq, AAA   7217/7217
(100 %)
0 diff
(100 %id)
BG426978 Kidney .c 3 to 767 1 to 771   available from MGC,   771/772
(99 %)
19 diff
(97.6 %id)
BC112049 Colon, PCR rescued clones .c 54 to 4055 9 to 4010 T380P S459F T511A     4002/4010
(99 %)
1 diff
(100.0 %id)
TI_891530072   .c 54 to 1073 63 to 1070       1008/1216
(82 %)
0 diff
(100 %id)
TI_1242418402   .c 54 to 1164 52 to 1150       1099/1219
(90 %)
17 diff
(98.7 %id)
BC093827 Colon, PCR rescued clones .c 58 to 4048 1 to 3991 T380P S459F T511A     3991/3991
(100 %)
7 diff
(99.9 %id)
BC118918 PCR rescued clones .c 59 to 6370 1 to 6312 T380P T511A     6312/6312
(100 %)
4 diff
(100.0 %id)
CB962348 Blood vessels - aorta, basilar and artery .c 223 to 883 1 to 661       661/729
(90 %)
10 diff
(98.7 %id)
T11978   .c 421 to 623 7 to 209       203/209
(97 %)
0 diff
(100 %id)
TI_1242414484   .c 612 to 1686 1 to 1071       1071/1244
(86 %)
13 diff
(99.0 %id)
TI_891526894   .c 613 to 1775 1 to 1150       1150/1203
(95 %)
44 diff
(96.4 %id)
BC062770 Kidney .c 613 to 1982 4 to 1373   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1370/1409
(97 %)
2 diff
(99.9 %id)
BG398648 Kidney .c 613 to 1359 1 to 742   available from MGC,   742/854
(86 %)
25 diff
(97.1 %id)
CN282364 embryonic stem cells, cell lines H1, H7, andH9 .c 696 to 1173 21 to 497       477/497
(95 %)
0 diff
(100 %id)
AB051536 brain .c 841 to 7211 1 to 6373   available from KIAA,   6373/6373
(100 %)
20 diff
(99.7 %id)
TI_891526895   .c 933 to 1980 1 to 1046       1046/1223
(85 %)
9 diff
(99.3 %id)
BQ694494 adipose .c 1143 to 1830 1 to 683       683/684
(99 %)
9 diff
(98.7 %id)
TI_891526883   .c 1221 to 2337 1 to 1105       1105/1236
(89 %)
25 diff
(98.0 %id)
BX484557   .c 1243 to 1742 1 to 500       500/500
(100 %)
3 diff
(99.4 %id)
CN288179 embryonic stem cells, cell lines H1, H7, andH9 .c 1478 to 1972 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
DR002615 fetal brain .c 1493 to 2170 29 to 705       677/705
(96 %)
1 diff
(99.9 %id)
TI_891526884   .c 1656 to 2653 11 to 1006       996/1214
(82 %)
1 diff
(100.0 %id)
TI_1242414474   .c 1656 to 2755 14 to 1102       1089/1234
(88 %)
15 diff
(98.8 %id)
BX504344   .c 1721 to 2370 1 to 650       650/650
(100 %)
1 diff
(99.9 %id)
TI_891527472   .c 1776 to 2820 1044 to 4       1041/1173
(88 %)
6 diff
(99.5 %id)
TI_891526885   .c 1844 to 2873 1 to 1029       1029/1210
(85 %)
16 diff
(98.7 %id)
BF734402 amnion_normal .c 1870 to 2218 359 to 12     Submitted on the opposite strand 348/359
(96 %)
1 diff
(99.8 %id)
BE161577 head_neck .c 1960 to 2480 1 to 523       523/583
(89 %)
14 diff
(97.6 %id)
TI_891527471   .c 2003 to 3105 1108 to 14       1097/1190
(92 %)
24 diff
(98.0 %id)
AK027863 placenta .c 2089 to 7211 1 to 5122   available from FLJ,   5122/5122
(100 %)
11 diff
(99.8 %id)
DA834230 placenta .c 2090 to 2791 2 to 701   capped   700/700
(100 %)
6 diff
(99.2 %id)
DB325640 brain .c 2187 to 2726 540 to 1       540/540
(100 %)
2 diff
(99.7 %id)
AI915843 Kidney .c 2260 to 2726 464 to 1       464/471
(98 %)
10 diff
(97.9 %id)
AI564080 Kidney .c 2284 to 2726 443 to 1       443/443
(100 %)
1 diff
(99.8 %id)
DR158697 human embryonic stem cells differentiated toan early endodermal cell type .c 2363 to 3138 1 to 776       776/776
(100 %)
0 diff
(100 %id)
CN348182 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 2370 to 3058 1 to 689       689/689
(100 %)
2 diff
(99.8 %id)
AW771333 Kidney .c 2393 to 2726 334 to 1       334/334
(100 %)
4 diff
(98.9 %id)
BF377237 testis_normal .c 2411 to 2910 32 to 542       511/542
(94 %)
12 diff
(97.8 %id)
TI_891526887   .c 2433 to 3533 1 to 1095       1095/1233
(88 %)
12 diff
(99.1 %id)
AA355939   .c 2479 to 2747 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
TI_891527470   .c 2479 to 3433 958 to 2       957/1194
(80 %)
7 diff
(99.5 %id)
BF376016 testis_normal .c 2527 to 2748 12 to 233       222/233
(95 %)
1 diff
(99.6 %id)
BF376010 testis_normal .c 2538 to 3072 1 to 537       537/538
(99 %)
24 diff
(95.6 %id)
DA804340 brain .c 2609 to 3159 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
TI_891527469   .c 2627 to 3723 1106 to 10       1094/1211
(90 %)
29 diff
(97.7 %id)
BE161738 head_neck .c 2640 to 3050 1 to 411       411/411
(100 %)
1 diff
(99.8 %id)
DB238275 trachea .c 2676 to 3249 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
TI_1242414620   .c 2688 to 3741 1047 to 1       1047/1185
(88 %)
11 diff
(99.1 %id)
AL710594 human skeletal muscle .c 2699 to 3301 1 to 603       603/603
(100 %)
2 diff
(99.7 %id)
CD634483   .c 2730 to 3231 6 to 507       502/507
(99 %)
1 diff
(99.9 %id)
AI281946 carcinoid, lung .c 2736 to 3331 1 to 596     Submitted on the opposite strand 596/596
(100 %)
0 diff
(100 %id)
CD634484   .c 2741 to 3220 492 to 1       488/509
(95 %)
15 diff
(97.1 %id)
AA911336 carcinoid, lung .c 2771 to 3128 1 to 358     Submitted on the opposite strand 358/358
(100 %)
2 diff
(99.5 %id)
CD634481   .c 2783 to 3243 16 to 476       461/478
(96 %)
1 diff
(99.8 %id)
CD634482   .c 2783 to 3243 463 to 3       461/479
(96 %)
0 diff
(100 %id)
TI_1242414478   .c 2824 to 4069 11 to 1251   AAA   1241/1258
(98 %)
63 diff
(95.0 %id)
TI_1242418786   .c 2974 to 4062 1141 to 68       1071/1141
(93 %)
26 diff
(97.8 %id)
BI049912 placenta_normal .c 2985 to 3327 359 to 16       344/359
(95 %)
1 diff
(99.8 %id)
TI_891526889   .c 3151 to 4061 8 to 917       910/1248
(72 %)
3 diff
(99.8 %id)
BF366975 placenta_normal .c 3218 to 3715 2 to 497       496/497
(99 %)
1 diff
(99.8 %id)
DB286389 uterus .c 3310 to 3775 2 to 469   capped   468/468
(100 %)
2 diff
(99.6 %id)
CD653966 Embryonic Stem cells .c 3408 to 4194 48 to 833       786/833
(94 %)
7 diff
(99.2 %id)
TI_891526890   .c 3426 to 4061 1 to 634       634/1258
(50 %)
9 diff
(99.3 %id)
TI_1242414480   .c 3436 to 4062 10 to 634       627/1227
(51 %)
6 diff
(99.6 %id)
BF352183 head_neck .c 3576 to 3807 238 to 6       233/260
(89 %)
4 diff
(98.5 %id)
AW850124 colon .c 3720 to 3902 1 to 183       183/183
(100 %)
0 diff
(100 %id)
CN348183 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 4290 to 4848 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
BQ368777 placenta_normal .c 4319 to 4494 1 to 179       179/180
(99 %)
7 diff
(96.2 %id)
CN348180 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 4383 to 4848 1 to 468       468/468
(100 %)
3 diff
(99.4 %id)
BG999712 head_normal .c 4761 to 5107 1 to 354       354/360
(98 %)
16 diff
(95.6 %id)
BQ368776 placenta_normal .c 4761 to 4843 1 to 84       84/101
(83 %)
6 diff
(94.1 %id)
CN348179 embryonic stem cells, DMSO-treated H9 cellline .c 4800 to 5354 1 to 555       555/559
(99 %)
2 diff
(99.7 %id)
DB166074 thyroid gland .c 4823 to 5482 2 to 660   capped   659/659
(100 %)
1 diff
(99.9 %id)
DA709852   .c 4830 to 5375 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BP277032 Kidney .c 4868 to 5299 1 to 432       432/563
(76 %)
4 diff
(99.3 %id)
DA627911 Kidney .c 4901 to 5438 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
T11615   .c 4914 to 5203 1 to 288       288/288
(100 %)
6 diff
(98.0 %id)
CK430250 eye, lacrimal gland .c 4940 to 5460 1 to 521       521/521
(100 %)
1 diff
(99.9 %id)
BP236105 coronary artery .c 5064 to 5643 1 to 581       581/583
(99 %)
28 diff
(95.2 %id)
CV409209 head_neck .c 5075 to 5334 200 to 459       260/459
(56 %)
0 diff
(100 %id)
CN348181 embryonic stem cells, cell lines H1, H7, andH9 .c 5168 to 5538 1 to 371       371/371
(100 %)
2 diff
(99.5 %id)
DA848612 placenta .c 5231 to 5801 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA843733 placenta .c 5284 to 5842 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA846700 placenta .c 5284 to 5859 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA858823 placenta .c 5288 to 5860 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BC021799 Kidney, hypernephroma .c 5291 to 7211 1 to 1921   available from MGC, AAA   1921/1921
(100 %)
1 diff
(100.0 %id)
BG167585 hypernephroma, cell line, Kidney .c 5292 to 5912 1 to 625   available from MGC,   625/1109
(56 %)
30 diff
(97.3 %id)
BM005958 hepatocellular carcinoma, cell line, Liver .c 5298 to 5851 1 to 549       549/549
(100 %)
7 diff
(98.8 %id)
TI_59385907   .c 5298 to 5851 63 to 611       549/549
(100 %)
7 diff
(98.8 %id)
BQ643617 hepatocellular carcinoma, cell line, Liver .c 5300 to 6174 1 to 878       878/973
(90 %)
30 diff
(97.0 %id)
BQ649026 hepatocellular carcinoma, cell line, Liver .c 5300 to 5965 1 to 667       667/1039
(64 %)
19 diff
(98.2 %id)
BQ646114 hepatocellular carcinoma, cell line, Liver .c 5300 to 6086 1 to 810       810/946
(85 %)
21 diff
(97.8 %id)
BM706094 eye, lens .c 5318 to 5755 1 to 438       438/438
(100 %)
4 diff
(99.1 %id)
CD516317 White Matter .c 5329 to 6043 1 to 718   AAA   718/751
(95 %)
9 diff
(98.9 %id)
BP242019 Liver .c 5393 to 5976 1 to 580       580/580
(100 %)
7 diff
(98.8 %id)
AK027025   .c 5395 to 7211 1 to 1814   available from FLJ, AAA   1814/1814
(100 %)
9 diff
(99.6 %id)
CB269228 adipose .c 5425 to 5806 1 to 382       382/382
(100 %)
0 diff
(100 %id)
T89872 liver and spleen .c 5555 to 5869 5 to 313       309/363
(85 %)
0 diff
(100 %id)
BQ312356 breast_normal .c 5557 to 6075 1 to 519       519/520
(99 %)
7 diff
(98.7 %id)
CR740116 liver and spleen .c 5564 to 6246 1 to 682       682/682
(100 %)
5 diff
(99.3 %id)
CV374896 head_neck .c 5567 to 5900 391 to 73     Submitted on the opposite strand 319/391
(81 %)
0 diff
(100 %id)
BQ356152 head_neck .c 5608 to 5941 337 to 1       337/337
(100 %)
11 diff
(96.8 %id)
BG542538 lung .c 5615 to 6133 365 to 888       782/933
(83 %)
54 diff
(94.3 %id)
R80357 placenta .c 5838 to 6308 1 to 482       482/489
(98 %)
25 diff
(94.9 %id)
BQ375101 testis_normal .c 5990 to 6236 255 to 10       246/271
(90 %)
0 diff
(100 %id)
BG426971 Kidney .c 6058 to 6785 1 to 723       723/724
(99 %)
14 diff
(98.1 %id)
AA205759   .c 6107 to 6634 1 to 541       541/541
(100 %)
11 diff
(98.0 %id)
BM931745 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 6116 to 6644 529 to 1     Submitted on the opposite strand 529/579
(91 %)
1 diff
(99.9 %id)
TI_151763638   .c 6116 to 6647 98 to 629     Submitted on the opposite strand 532/928
(57 %)
3 diff
(99.7 %id)
TI_151763856   .c 6116 to 6647 98 to 629     Submitted on the opposite strand 532/944
(56 %)
3 diff
(99.7 %id)
TI_151732470   .c 6116 to 6647 102 to 633   fully sequenced, Submitted on the opposite strand 532/532
(100 %)
3 diff
(99.5 %id)
W85804 liver and spleen .c 6117 to 6588 1 to 482       482/482
(100 %)
11 diff
(97.8 %id)
W90093 liver and spleen .c 6117 to 6572 1 to 467       467/467
(100 %)
11 diff
(97.7 %id)
BM931678 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 6121 to 6644 524 to 1     Submitted on the opposite strand 524/524
(100 %)
1 diff
(99.9 %id)
BF369688 placenta_normal .c 6196 to 6604 405 to 2       404/407
(99 %)
0 diff
(100 %id)
BF985276 placenta_normal .c 6196 to 6595 432 to 34       399/434
(91 %)
0 diff
(100 %id)
AL110171 uterus .c 6221 to 7211 1 to 991   available from DKFZ, AAA   991/991
(100 %)
1 diff
(99.9 %id)
BF369665 placenta_normal .c 6233 to 6604 38 to 408       371/431
(86 %)
3 diff
(99.4 %id)
EL945844 eyeball .c 6312 to 6612 1 to 304       304/304
(100 %)
10 diff
(96.8 %id)
R24190 placenta .c 6323 to 6683 1 to 371       371/442
(83 %)
14 diff
(96.9 %id)
N56574   .c 6330 to 6476 1 to 145       145/145
(100 %)
9 diff
(93.8 %id)
TI_149309281   .c 6348 to 7210 940 to 89   AAA   852/979
(87 %)
11 diff
(98.9 %id)
TI_151808879   .c 6366 to 6644 354 to 76   fully sequenced, Submitted on the opposite strand 279/279
(100 %)
2 diff
(99.3 %id)
AA418235 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 6400 to 6883 1 to 484     Submitted on the opposite strand 484/484
(100 %)
6 diff
(98.8 %id)
W24860 lung .c 6401 to 6644 1 to 245       245/248
(98 %)
5 diff
(98.0 %id)
BX102494 lung .c 6403 to 7118 1 to 717       717/717
(100 %)
1 diff
(99.9 %id)
H53170 liver and spleen .c 6412 to 6857 1 to 455   fully sequenced,   455/455
(100 %)
21 diff
(95.4 %id)
BF848243 lung_normal .c 6415 to 6727 1 to 312       312/351
(88 %)
7 diff
(98.1 %id)
T78774 liver and spleen .c 6425 to 6942 1 to 525       525/525
(100 %)
16 diff
(97.0 %id)
AW606997 head_neck .c 6434 to 6755 11 to 330       320/330
(96 %)
0 diff
(100 %id)
AA143163 uterus .c 6439 to 6860 1 to 423   fully sequenced,   423/423
(100 %)
2 diff
(99.6 %id)
BF369772 placenta_normal .c 6441 to 6603 160 to 1       160/160
(100 %)
10 diff
(93.8 %id)
CN334861 embryonic stem cells, DMSO-treated H9 cellline .c 6472 to 6898 7 to 433       427/433
(98 %)
0 diff
(100 %id)
BM705309 eye, RPE and Choroid .c 6493 to 7007 1 to 515       515/515
(100 %)
2 diff
(99.7 %id)
BQ183819 Knee, Osteoarthritic Cartilage .c 6515 to 7211 715 to 19   AAA   697/697
(100 %)
3 diff
(99.6 %id)
TI_154014141   .c 6518 to 7211 823 to 126   AAA   698/800
(87 %)
13 diff
(98.4 %id)
BU687691 lung .c 6522 to 7210 706 to 19   AAA   688/688
(100 %)
1 diff
(99.9 %id)
TI_149286644   .c 6527 to 7211 759 to 75   AAA   685/1117
(61 %)
2 diff
(99.9 %id)
H63306 liver and spleen .c 6531 to 6836 1 to 308       308/309
(99 %)
6 diff
(98.1 %id)
TI_151713481   .c 6552 to 7205 768 to 116   AAA   653/658
(99 %)
27 diff
(95.9 %id)
BM972181 lung .c 6562 to 7211 668 to 19   AAA   650/650
(100 %)
2 diff
(99.7 %id)
AA700227 liver and spleen .c 6583 to 7211 629 to 1       629/629
(100 %)
5 diff
(99.3 %id)
BQ018491 lung, Metastatic Chondrosarcoma .c 6592 to 7218 645 to 19   tiling clone, AAA   627/627
(100 %)
0 diff
(100 %id)
AA205724   .c 6689 to 7211 523 to 1       523/523
(100 %)
3 diff
(99.5 %id)
CA436250 lung, Metastatic Chondrosarcoma .c 6701 to 7211 528 to 19   AAA   510/510
(100 %)
1 diff
(99.9 %id)
AW592460 pooled .c 6738 to 7213 480 to 5       476/480
(99 %)
0 diff
(100 %id)
BQ023767 placenta .c 6741 to 7218 488 to 19   AAA   470/470
(100 %)
4 diff
(99.2 %id)
TI_151750182   .c 6747 to 7205 549 to 84   AAA   466/1141
(40 %)
25 diff
(97.9 %id)
AI379458 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 6748 to 7213 469 to 4       466/469
(99 %)
0 diff
(100 %id)
N50893 multiple sclerosis lesions .c 6751 to 7206 457 to 1       457/457
(100 %)
5 diff
(99.0 %id)
BF091636 testis_normal .c 6753 to 7156 35 to 439       405/439
(92 %)
15 diff
(96.6 %id)
AA999838 Kidney .c 6754 to 7211 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
AI685849 Prostate .c 6754 to 7219 466 to 1       466/466
(100 %)
0 diff
(100 %id)
AI813803 adenocarcinoma, Pancreas .c 6754 to 7211 470 to 14   AAA   457/457
(100 %)
4 diff
(99.2 %id)
AI224541 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 6755 to 7210 473 to 19   AAA   455/455
(100 %)
3 diff
(99.4 %id)
AI493329 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 6755 to 7213 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AI467921 pooled .c 6755 to 7218 477 to 14   AAA   464/464
(100 %)
0 diff
(100 %id)
AI635664 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 6756 to 7206 451 to 1       451/451
(100 %)
3 diff
(99.4 %id)
BF057380 fibrotheoma, ovary .c 6756 to 7218 463 to 1       463/463
(100 %)
0 diff
(100 %id)
BF091611 testis_normal .c 6758 to 7124 17 to 381       365/381
(95 %)
0 diff
(100 %id)
BE938040 testis_normal .c 6760 to 7050 1 to 291       291/291
(100 %)
6 diff
(98.0 %id)
BF091571 testis_normal .c 6767 to 7156 1 to 389       389/389
(100 %)
15 diff
(96.2 %id)
AI298257 carcinoid, lung .c 6771 to 7210 451 to 12   AAA   440/440
(100 %)
2 diff
(99.6 %id)
W85805 liver and spleen .c 6774 to 7211 447 to 1       447/449
(99 %)
9 diff
(98.0 %id)
N58214 liver and spleen .c 6784 to 7211 435 to 1       435/436
(99 %)
10 diff
(97.8 %id)
DB382008 thyroid gland .c 6785 to 7211 427 to 1       427/427
(100 %)
0 diff
(100 %id)
N95776 lung .c 6790 to 7211 427 to 1       427/427
(100 %)
8 diff
(98.2 %id)
AA778107 heart .c 6790 to 7211 440 to 19   AAA   422/422
(100 %)
0 diff
(100 %id)
AW136348   .c 6796 to 7205 427 to 18   AAA   410/410
(100 %)
1 diff
(99.8 %id)
AA595322 Prostate, prostate tumor .c 6798 to 7211 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AW873580 pooled .c 6801 to 7207 408 to 2       407/408
(99 %)
0 diff
(100 %id)
AA418349 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 6808 to 7219 413 to 2     Submitted on the opposite strand 412/413
(99 %)
0 diff
(100 %id)
AA206414   .c 6820 to 7051 279 to 48       232/284
(81 %)
0 diff
(100 %id)
AA142981 uterus .c 6830 to 7216 369 to 1   fully sequenced,   369/369
(100 %)
3 diff
(99.2 %id)
H53066 liver and spleen .c 6832 to 7197 373 to 1   fully sequenced,   373/373
(100 %)
11 diff
(97.1 %id)
AI217715 pooled .c 6832 to 7213 387 to 6       382/387
(98 %)
0 diff
(100 %id)
AA913116 Kidney .c 6835 to 7218 384 to 1       384/384
(100 %)
0 diff
(100 %id)
DB381364 placenta .c 6851 to 7211 361 to 1       361/362
(99 %)
4 diff
(98.9 %id)
AI183334 heart .c 6852 to 7213 363 to 2       362/363
(99 %)
0 diff
(100 %id)
AA678787   .c 6853 to 7211 397 to 39   AAA   359/359
(100 %)
0 diff
(100 %id)
R80245 placenta .c 6856 to 7211 363 to 1       363/363
(100 %)
7 diff
(98.1 %id)
AW130862 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 6873 to 7210 368 to 30   AAA   339/341
(99 %)
14 diff
(95.9 %id)
T56908 fetal spleen, Spleen .c 6894 to 7213 325 to 6       320/325
(98 %)
0 diff
(100 %id)
W90135 liver and spleen .c 6895 to 7211 321 to 1       321/321
(100 %)
4 diff
(98.8 %id)
AA782165 parathyroid gland, parathyroid tumor .c 6896 to 7211 334 to 19   AAA   316/316
(100 %)
2 diff
(99.4 %id)
AI352073 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 6930 to 7211 282 to 1       282/282
(100 %)
7 diff
(97.6 %id)
AA205737   .c 6950 to 7153 204 to 1       204/204
(100 %)
0 diff
(100 %id)
AI798589 Prostate .c 6956 to 7213 260 to 3       258/260
(99 %)
0 diff
(100 %id)
BF091647 testis_normal .c 6998 to 7160 176 to 16       161/183
(87 %)
0 diff
(100 %id)
AW007953 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 6998 to 7218 222 to 1       222/234
(94 %)
1 diff
(99.6 %id)
AA913551 Kidney .c 7001 to 7218 218 to 1       218/218
(100 %)
2 diff
(99.1 %id)
EC568862 Prostate .c 7045 to 7150 1 to 105       105/105
(100 %)
4 diff
(96.2 %id)
EC442971 Prostate .c 7046 to 7149 1 to 104       104/104
(100 %)
0 diff
(100 %id)
EC515937 Prostate .c 7046 to 7149 1 to 104       104/104
(100 %)
0 diff
(100 %id)
AA661765 normal prostate, Prostate .c 7116 to 7223 122 to 15   AAA   108/112
(96 %)
0 diff
(100 %id)
DA533977 brain .d 1 to 576 2 to 577   tiling clone, capped   576/576
(100 %)
1 diff
(99.9 %id)
DB317828 brain .d 1940 to 2463 537 to 13   tiling clone,   525/537
(97 %)
3 diff
(99.5 %id)
BX487186   .e-u 1 to 579 35 to 615 F97L tiling clone,   581/615
(94 %)
0 diff
(100 %id)
AI660350 thymus, pooled .e-u 521 to 987 467 to 1   tiling clone,   467/467
(100 %)
3 diff
(99.4 %id)
AV747515 Pituitary .f 1 to 510 1 to 506 G63E tiling clone,   506/509
(99 %)
7 diff
(98.7 %id)
AK130503 salivary gland .g-u 1 to 1986 1 to 1986 T31P tiling clone, available from FLJ,   1986/2499
(79 %)
11 diff
(99.6 %id)
BC015433 Liver, adenocarcinoma .h 1 to 909 1 to 908 S26G S28D V42I H49R G113E tiling clone, available from MGC, AAA   908/908
(100 %)
8 diff
(99.2 %id)
BG034859 adenocarcinoma, cell line, Liver .h 19 to 751 17 to 739   available from MGC,   723/990
(73 %)
19 diff
(98.1 %id)
BI003375 head_normal .h 748 to 874 1 to 128       128/128
(100 %)
3 diff
(97.7 %id)
AI478622 Kidney .i-u 1 to 534 534 to 1 exact tiling clone,   534/534
(100 %)
0 diff
(100 %id)
BF592546 breast, lobullar carcinoma in situ .j-u 1 to 365 393 to 29 exact tiling clone,   365/411
(88 %)
0 diff
(100 %id)
BF056712 breast, lobullar carcinoma in situ .j-u 1 to 263 34 to 296 exact tiling clone,   263/296
(88 %)
0 diff
(100 %id)
BF477042 breast, lobullar carcinoma in situ .j-u 19 to 365 386 to 40 exact     347/386
(89 %)
0 diff
(100 %id)
AW294560   Gene CGNL1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g-u, .h, .i-u, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC