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Gene C12orf52TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
442 supporting clones for gene C12orf52 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BE794898 lung, small cell carcinoma .a 45 to 882 1 to 825   tiling clone,   825/868
(95 %)
25 diff
(97.2 %id)
BX331303 Neuroblastoma Cot 10-normalized .a 51 to 903 1 to 853       853/853
(100 %)
6 diff
(99.3 %id)
DA540444 lung .a 129 to 554 2 to 427   capped   426/426
(100 %)
1 diff
(99.8 %id)
BP315894 mammary gland .a 130 to 711 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA134930 alzheimer cortex .a 133 to 693 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA207641 brain .a 134 to 690 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA749468   .a 139 to 708 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CR617377 Neuroblastoma Cot 25-normalized .a 145 to 1632 1 to 1488 exact tiling clone,   1488/1488
(100 %)
0 diff
(100 %id)
CR622791 B cells (Ramos cell line) Cot 25-normalized .a 145 to 1611 1 to 1467 exact     1467/1467
(100 %)
0 diff
(100 %id)
BX366455 Neuroblastoma Cot 25-normalized .a 145 to 1148 1 to 1000       1000/1011
(98 %)
11 diff
(99.0 %id)
BX366456 Neuroblastoma Cot 25-normalized .a 145 to 1108 1 to 943       943/943
(100 %)
19 diff
(98.0 %id)
CR605763 Neuroblastoma Cot 25-normalized .a 147 to 1611 1 to 1465 exact     1465/1465
(100 %)
0 diff
(100 %id)
BX375937 Neuroblastoma Cot 25-normalized .a 147 to 844 1 to 698   fully sequenced,   698/698
(100 %)
1 diff
(99.9 %id)
DA091389 cerebellum .a 160 to 681 2 to 524   capped   523/523
(100 %)
4 diff
(99.3 %id)
DA642601 Liver .a 160 to 459 2 to 301   capped   300/300
(100 %)
0 diff
(100 %id)
DA605604   .a 162 to 769 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
DA891320 rectum .a 165 to 656 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DA692863   .a 178 to 738 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BI764399 pooled colon, kidney, stomach .a 180 to 943 1 to 783       718/783
(91 %)
52 diff
(93.4 %id)
CD244262 testis .a 181 to 1019 1 to 848       848/849
(99 %)
11 diff
(98.8 %id)
BM545689 ovary (pool of 3) .a 235 to 1029 175 to 979       805/993
(81 %)
86 diff
(91.4 %id)
DB477036.
matches multiple genes
hippocampus .a 341 to 837 1 to 497     also hits gene riyuri 497/497
(100 %)
1 diff
(99.8 %id)
DA113499 cerebellum .a 431 to 520 463 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA355843 subthalamic nucleus .a 431 to 509 482 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA368653 subthalamic nucleus .a 431 to 524 463 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA844253 placenta .a 431 to 532 466 to 567   capped   566/567
(99 %)
5 diff
(99.2 %id)
BX354462 Neuroblastoma Cot 25-normalized .a 814 to 1611 797 to 1   fully sequenced,   797/797
(100 %)
2 diff
(99.8 %id)
BM727540 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 964 to 1355 1 to 392   fully sequenced,   392/392
(100 %)
0 diff
(100 %id)
BG402980 bladder, transitional cell papilloma, cell line .a 1050 to 1716 1 to 665       665/665
(100 %)
3 diff
(99.6 %id)
TI_149298492   .a 1050 to 1848 867 to 84   AAA   784/803
(97 %)
52 diff
(93.6 %id)
TI_149298981   .a 1050 to 1848 878 to 94   AAA   785/940
(83 %)
15 diff
(98.5 %id)
AW157248 brain, frontal lobe .a 1108 to 1642 542 to 7       536/542
(98 %)
0 diff
(100 %id)
BU684867 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1126 to 1848 735 to 19   AAA   717/717
(100 %)
7 diff
(99.1 %id)
BE564162 bone marrow, from chronic myelogenous leukemia .a 1145 to 1848 1 to 689   AAA   689/689
(100 %)
23 diff
(96.7 %id)
AW157247 brain, frontal lobe .a 1164 to 1642 485 to 7       479/485
(98 %)
0 diff
(100 %id)
AW157255 brain, frontal lobe .a 1164 to 1642 486 to 7       480/486
(98 %)
0 diff
(100 %id)
BM720412 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1175 to 1325 1 to 151   fully sequenced,   151/151
(100 %)
0 diff
(100 %id)
BM678753 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1295 to 1848 572 to 19   fully sequenced, AAA   554/554
(100 %)
0 diff
(100 %id)
BM983222 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1311 to 1848 556 to 19   AAA   538/538
(100 %)
5 diff
(99.1 %id)
BM681753 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1325 to 1848 540 to 19   fully sequenced, AAA   522/522
(100 %)
1 diff
(99.9 %id)
T98464 liver and spleen .a 1369 to 1620 1 to 262   fully sequenced,   262/262
(100 %)
11 diff
(95.9 %id)
AI018728   .a 1420 to 1851 433 to 2       432/433
(99 %)
0 diff
(100 %id)
AW662815 pooled .a 1421 to 1854 434 to 1       434/434
(100 %)
1 diff
(99.8 %id)
AI653802 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1422 to 1853 445 to 14   AAA   432/432
(100 %)
2 diff
(99.6 %id)
AI831114 lymph node, lymphoma, follicular mixed small and largecell .a 1430 to 1850 421 to 1       421/421
(100 %)
0 diff
(100 %id)
AA594422 colon, colon tumor RER+ .a 1457 to 1855 402 to 4   tiling clone,   399/402
(99 %)
0 diff
(100 %id)
F34302 pectoral muscle (after mastectomy) .a 1459 to 1818 1 to 360       360/360
(100 %)
4 diff
(98.9 %id)
AI520720 adenocarcinoma, Pancreas .a 1466 to 1853 388 to 1       388/388
(100 %)
1 diff
(99.8 %id)
H97765 liver and spleen .a 1467 to 1853 391 to 4       388/392
(98 %)
0 diff
(100 %id)
AI017734   .a 1472 to 1848 395 to 19   AAA   377/377
(100 %)
5 diff
(98.7 %id)
BI964790 Islets of Langerhans, Pancreas .a 1522 to 1851 1 to 330       330/334
(98 %)
5 diff
(98.6 %id)
AA909392 pooled .a 1545 to 1848 304 to 1       304/304
(100 %)
2 diff
(99.4 %id)
AI915549 pooled .a 1545 to 1849 305 to 1       305/305
(100 %)
1 diff
(99.7 %id)
T98520 liver and spleen .a 1590 to 1842 263 to 1   fully sequenced,   263/263
(100 %)
9 diff
(96.6 %id)
T30184 uterus .a 1639 to 1848 1 to 210       210/210
(100 %)
0 diff
(100 %id)
T30185 uterus .a 1639 to 1848 210 to 1       210/210
(100 %)
0 diff
(100 %id)
BP273624   .b 130 to 687 1 to 558   tiling clone,   558/558
(100 %)
1 diff
(99.9 %id)
CB107825 Liver .b 130 to 623 1 to 494       494/494
(100 %)
2 diff
(99.6 %id)
DA066828 cerebellum .b 131 to 707 2 to 578   capped   577/578
(99 %)
1 diff
(99.9 %id)
DA067163 cerebellum .b 131 to 581 2 to 452   capped   451/451
(100 %)
1 diff
(99.8 %id)
DA084718 cerebellum .b 131 to 536 2 to 407   capped   406/406
(100 %)
2 diff
(99.6 %id)
DA139242 alzheimer cortex .b 131 to 744 2 to 615   capped   614/614
(100 %)
0 diff
(100 %id)
AL560832 B cells from Burkitt lymphoma .b 144 to 920 1 to 785       667/1063
(62 %)
33 diff
(96.9 %id)
BX352694 Neuroblastoma Cot 10-normalized .b 151 to 1017 1 to 866       866/866
(100 %)
3 diff
(99.7 %id)
CD580378 brain .b 158 to 921 1 to 764       764/810
(94 %)
11 diff
(98.7 %id)
DA364336 subthalamic nucleus .b 160 to 721 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB053998 testis .b 160 to 626 2 to 469   capped   468/468
(100 %)
2 diff
(99.6 %id)
DA690532   .b 162 to 452 2 to 292   capped   291/291
(100 %)
0 diff
(100 %id)
DA783223 brain .b 163 to 486 2 to 325   capped   324/326
(99 %)
1 diff
(99.7 %id)
BX403928 neuroblastoma .b 181 to 1178 1 to 987   fully sequenced,   987/987
(100 %)
8 diff
(99.2 %id)
CR606890 neuroblastoma .b 181 to 1755 1 to 1575 exact tiling clone,   1575/1575
(100 %)
0 diff
(100 %id)
DA478404   .b 431 to 542 464 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
AL582286 B cells from Burkitt lymphoma .b 918 to 1735 817 to 1       817/981
(83 %)
10 diff
(99.0 %id)
BX433695 neuroblastoma .b 1148 to 1755 608 to 1   fully sequenced,   608/608
(100 %)
10 diff
(98.4 %id)
CF995108 Human Placenta, placenta .c 1 to 826 36 to 867       840/909
(92 %)
25 diff
(97.3 %id)
DA057302 cerebellum .c 1 to 470 9 to 478   capped   477/477
(100 %)
1 diff
(99.8 %id)
DA362442 subthalamic nucleus .c 1 to 551 9 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA363043 subthalamic nucleus .c 1 to 553 9 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA827281 pericardium .c 1 to 556 9 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA840515 placenta .c 1 to 467 9 to 476   capped   475/475
(100 %)
2 diff
(99.6 %id)
DA916583 small intestine .c 1 to 465 9 to 473   capped   472/472
(100 %)
3 diff
(99.4 %id)
DA573324   .c 1 to 684 6 to 692   capped   691/708
(97 %)
9 diff
(98.8 %id)
DA894891 skeletal muscle .c 1 to 508 6 to 513   capped   512/512
(100 %)
1 diff
(99.9 %id)
DB007299 cervix, tumor tissue .c 1 to 496 6 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
BM811477 amelanotic melanoma, cell line, skin .c 1 to 659 27 to 687       664/1180
(56 %)
29 diff
(97.6 %id)
DA700893   .c 1 to 441 5 to 445   tiling clone, capped   444/444
(100 %)
2 diff
(99.6 %id)
BM558766 amelanotic melanoma, cell line, skin .c 1 to 808 3 to 819       819/1051
(77 %)
30 diff
(97.2 %id)
CR983577 T-Lymphocytes .c 1 to 250 3 to 252       252/254
(99 %)
1 diff
(99.7 %id)
DA910350   .c 1 to 468 4 to 473   capped   472/472
(100 %)
2 diff
(99.6 %id)
BM911750 amelanotic melanoma, cell line, skin .c 1 to 862 2 to 876       876/990
(88 %)
27 diff
(97.3 %id)
BM810935 amelanotic melanoma, cell line, skin .c 1 to 864 2 to 883       883/1091
(80 %)
45 diff
(95.9 %id)
AL555180 placenta .c 1 to 912 1 to 903       903/903
(100 %)
15 diff
(98.4 %id)
BM554987 amelanotic melanoma, cell line, skin .c 1 to 439 29 to 478   AAA   450/1296
(34 %)
5 diff
(99.7 %id)
BM559325 amelanotic melanoma, cell line, skin .c 1 to 802 26 to 830       805/1020
(78 %)
15 diff
(98.6 %id)
DA822719 pericardium .c 1 to 575 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BE263863 lung, small cell carcinoma .c 3 to 614 1 to 613       613/613
(100 %)
2 diff
(99.7 %id)
BQ641767 eye, normal pigmented retinal epithelium .c 3 to 697 1 to 704       704/1001
(70 %)
21 diff
(98.0 %id)
BQ948129 eye, normal pigmented retinal epithelium .c 3 to 677 1 to 680       680/878
(77 %)
9 diff
(99.0 %id)
BQ943060 epidermoid carcinoma, cell line, lung .c 3 to 870 1 to 873       873/950
(91 %)
15 diff
(98.5 %id)
BE882677 leiomyosarcoma, uterus .c 9 to 744 1 to 742       742/785
(94 %)
36 diff
(95.5 %id)
BQ278768 adenocarcinoma, cell line, breast .c 9 to 919 1 to 921       921/1079
(85 %)
40 diff
(96.3 %id)
BU557959 adenocarcinoma, cell line, breast .c 9 to 251 1 to 243       243/243
(100 %)
0 diff
(100 %id)
CR608011 HeLa cells Cot 25-normalized .c 14 to 1949 1 to 1936 exact     1936/1936
(100 %)
0 diff
(100 %id)
BX384471   .c 14 to 1007 1 to 981   fully sequenced,   981/981
(100 %)
17 diff
(98.3 %id)
BI757110 brain .c 14 to 816 1 to 808       808/808
(100 %)
10 diff
(98.8 %id)
TI_57221658   .c 14 to 816 64 to 871       808/871
(92 %)
16 diff
(98.2 %id)
BQ900485 eye, retinoblastoma .c 18 to 802 1 to 788       788/884
(89 %)
8 diff
(99.1 %id)
BX342663   .c 25 to 925 1 to 895       895/901
(99 %)
53 diff
(94.2 %id)
BU558271 adenocarcinoma, cell line, breast .c 25 to 578 1 to 554       554/964
(57 %)
23 diff
(97.7 %id)
BG775258 carcinoma, cell line, Prostate .c 26 to 773 1 to 746       746/746
(100 %)
2 diff
(99.8 %id)
BM048078 carcinoma, cell line, Prostate .c 26 to 851 1 to 828       828/836
(99 %)
28 diff
(96.7 %id)
BM043961 carcinoma, cell line, Prostate .c 26 to 877 1 to 858       858/861
(99 %)
37 diff
(95.8 %id)
BF125958 melanotic melanoma, skin .c 69 to 580 1 to 514       514/514
(100 %)
4 diff
(99.3 %id)
BX394189 Neuroblastoma Cot 25-normalized .c 108 to 1022 8 to 922       915/926
(98 %)
18 diff
(98.1 %id)
AL517881 brain, neuroblastoma, neuroblastoma cells .c 119 to 1046 1 to 919   fully sequenced,   919/919
(100 %)
16 diff
(98.3 %id)
AL523765 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 119 to 1158 1 to 1029       1029/1101
(93 %)
19 diff
(98.3 %id)
CR621376 Neuroblastoma Cot 25-normalized .c 120 to 1751 1 to 1632 exact     1632/1632
(100 %)
0 diff
(100 %id)
CR622111 neuroblastoma .c 120 to 1958 1 to 1839 exact     1839/1839
(100 %)
0 diff
(100 %id)
TI_45210862   .c 121 to 922 77 to 870       794/890
(89 %)
21 diff
(97.7 %id)
BE748322 bone marrow, from acute myelogenous leukemia .c 125 to 801 1 to 672       672/822
(81 %)
15 diff
(98.2 %id)
BI597822 brain, hypothalamus .c 125 to 922 1 to 790       790/810
(97 %)
19 diff
(97.7 %id)
CB120791 cervix, Uterine .c 128 to 346 1 to 219       219/219
(100 %)
2 diff
(99.1 %id)
CR621332 T cells (Jurkat cell line) Cot10-normalized .c 128 to 1741 1 to 1614 exact     1614/1614
(100 %)
0 diff
(100 %id)
BP309460 brain .c 129 to 711 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DA925574 small intestine .c 129 to 715 2 to 588   capped   587/587
(100 %)
3 diff
(99.5 %id)
BP212602 cerebrum .c 130 to 708 1 to 579       579/579
(100 %)
4 diff
(99.4 %id)
DT219265 brain .c 130 to 754 1 to 625       625/625
(100 %)
0 diff
(100 %id)
DB464553.
matches multiple genes
hippocampus .c 130 to 547 1 to 412     also hits gene riyuri 412/413
(99 %)
11 diff
(97.4 %id)
DB474520.
matches multiple genes
hippocampus .c 130 to 608 1 to 479     also hits gene riyuri 479/479
(100 %)
0 diff
(100 %id)
DB474800.
matches multiple genes
hippocampus .c 130 to 643 1 to 514     also hits gene riyuri 514/514
(100 %)
0 diff
(100 %id)
BP245965 Kidney .c 130 to 721 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
BP255499 Kidney .c 130 to 711 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP256340 Kidney .c 130 to 714 1 to 585       585/585
(100 %)
0 diff
(100 %id)
CB120089 Liver .c 130 to 413 1 to 284       284/284
(100 %)
1 diff
(99.7 %id)
BP289514 lung .c 130 to 709 1 to 580       580/580
(100 %)
8 diff
(98.7 %id)
BP354955   .c 130 to 711 1 to 581       581/581
(100 %)
18 diff
(97.0 %id)
BP356551 mammary gland .c 130 to 710 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA004340   .c 131 to 688 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA006391   .c 131 to 695 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA057563 cerebellum .c 131 to 593 2 to 464   capped   463/463
(100 %)
1 diff
(99.8 %id)
DA070355 cerebellum .c 131 to 704 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA133343 alzheimer cortex .c 131 to 664 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA197326 brain .c 131 to 837 2 to 709   capped   708/708
(100 %)
6 diff
(99.2 %id)
DA346804 substantia nigra .c 131 to 685 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA355549 subthalamic nucleus .c 131 to 664 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA361970 subthalamic nucleus .c 131 to 687 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA367352 subthalamic nucleus .c 131 to 670 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
BP227534   .c 131 to 713 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA481438   .c 131 to 496 2 to 367   capped   366/366
(100 %)
0 diff
(100 %id)
DA563425 heart .c 131 to 664 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
DA602294   .c 131 to 679 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA608804   .c 131 to 664 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA611538   .c 131 to 723 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DA617356   .c 131 to 711 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA680821 ovary .c 131 to 651 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA681087 ovary .c 131 to 664 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA688521   .c 131 to 679 2 to 550   capped   549/550
(99 %)
2 diff
(99.7 %id)
DA692385   .c 131 to 672 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DA739235   .c 131 to 577 2 to 448   capped   447/447
(100 %)
0 diff
(100 %id)
DA774411 brain .c 131 to 697 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA775774 brain .c 131 to 442 2 to 312   capped   311/553
(56 %)
5 diff
(99.1 %id)
DA947718 Spleen .c 131 to 700 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA961537 Spleen .c 131 to 692 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA968974 stomach .c 131 to 717 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB002326 breast, tumor tissue .c 131 to 377 2 to 248   capped   247/247
(100 %)
0 diff
(100 %id)
DB025177 testis .c 131 to 688 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DB044795 testis .c 131 to 706 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB146605 thymus .c 131 to 414 2 to 285   capped   284/284
(100 %)
0 diff
(100 %id)
DB190313 lung, tumor tissue .c 131 to 721 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB293963   .c 131 to 807 2 to 672   capped   671/673
(99 %)
11 diff
(98.4 %id)
DB294344   .c 131 to 977 2 to 842   capped   843/852
(98 %)
26 diff
(97.0 %id)
DA998018   .c 132 to 638 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
BG386464 adenocarcinoma cell line, colon .c 133 to 716 1 to 595       595/769
(77 %)
19 diff
(97.6 %id)
DA640163 Liver .c 134 to 690 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA220903 brain .c 137 to 496 2 to 361   capped   360/360
(100 %)
2 diff
(99.5 %id)
DB105751 thymus .c 139 to 427 2 to 290   capped   289/289
(100 %)
1 diff
(99.7 %id)
CR597629 B cells (Ramos cell line) Cot 25-normalized .c 140 to 1735 1 to 1596 exact     1596/1596
(100 %)
0 diff
(100 %id)
AL561282 B cells from Burkitt lymphoma .c 140 to 928 1 to 791       791/972
(81 %)
6 diff
(99.4 %id)
DA482781   .c 141 to 721 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA736865   .c 141 to 818 2 to 680   capped   679/679
(100 %)
2 diff
(99.8 %id)
DN995911 breast cancer, Mammary gland (cancer tissue) .c 143 to 678 1 to 536       536/536
(100 %)
5 diff
(99.1 %id)
BX358473 Placenta Cot 25-normalized .c 146 to 1246 1 to 1098       1098/1098
(100 %)
15 diff
(98.7 %id)
CB054314 brain, glioblastoma (pooled) .c 146 to 526 10 to 390       381/390
(97 %)
6 diff
(98.5 %id)
AY007158   .c 147 to 1983 1 to 1837 exact     1837/1839
(99 %)
2 diff
(99.9 %id)
BX376800 Neuroblastoma Cot 50-normalized .c 147 to 1138 1 to 980       980/1029
(95 %)
22 diff
(97.9 %id)
AW401617 lymph .c 147 to 567 1 to 421       421/421
(100 %)
5 diff
(98.9 %id)
BI766258 pooled lung and spleen .c 147 to 973 1 to 835       835/838
(99 %)
25 diff
(97.1 %id)
TI_57177763   .c 147 to 973 35 to 869       835/872
(95 %)
28 diff
(96.8 %id)
BG281865 melanotic melanoma, skin .c 150 to 1005 1 to 849       849/849
(100 %)
14 diff
(98.4 %id)
BX366971   .c 152 to 959 23 to 831   fully sequenced,   809/831
(97 %)
8 diff
(99.1 %id)
BQ057743 lymph, lymphoma, cell line .c 152 to 924 1 to 772       772/1029
(75 %)
5 diff
(99.6 %id)
BQ064385 lymph, lymphoma, cell line .c 152 to 920 1 to 772       772/1052
(73 %)
26 diff
(97.6 %id)
BF975789 B-cells, primary B-cells from tonsils (cell line) .c 153 to 928 1 to 765       765/798
(95 %)
22 diff
(97.3 %id)
TI_154137754   .c 154 to 751 77 to 674       598/601
(99 %)
14 diff
(97.7 %id)
TI_57215248   .c 156 to 794 65 to 701       637/701
(90 %)
13 diff
(98.2 %id)
TI_57238243   .c 156 to 813 28 to 685       658/685
(96 %)
6 diff
(99.2 %id)
BE241657 leukopheresis .c 156 to 519 1 to 364       364/364
(100 %)
5 diff
(98.7 %id)
BI752224 brain .c 157 to 794 1 to 636       636/636
(100 %)
7 diff
(98.9 %id)
BI912777 brain .c 157 to 813 1 to 657       657/657
(100 %)
0 diff
(100 %id)
BP195899 brain .c 159 to 741 1 to 583       583/583
(100 %)
28 diff
(95.2 %id)
AK027733 ovary, tumor tissue .c 159 to 1933 1 to 1775 exact available from FLJ,   1775/1775
(100 %)
0 diff
(100 %id)
BX356915 Placenta Cot 25-normalized .c 159 to 916 1 to 754       754/1038
(72 %)
15 diff
(98.6 %id)
NM_032848.1   .c 159 to 1933 1 to 1775 exact RefSeq,   1775/1775
(100 %)
0 diff
(100 %id)
BP308731 brain .c 159 to 739 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP359389 mammary gland .c 159 to 738 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA012378 adrenal gland .c 160 to 720 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA014120 adrenal gland .c 160 to 707 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA054521 cerebellum .c 160 to 720 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA142033 alzheimer cortex .c 160 to 703 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA361881 subthalamic nucleus .c 160 to 605 2 to 447   capped   446/446
(100 %)
2 diff
(99.6 %id)
DA642959 Liver .c 160 to 715 2 to 558   capped   557/558
(99 %)
3 diff
(99.5 %id)
DA779710 brain .c 160 to 733 2 to 575   capped   574/575
(99 %)
3 diff
(99.5 %id)
DA812182 ovary, tumor tissue .c 160 to 923 2 to 780   capped   779/783
(99 %)
27 diff
(96.6 %id)
DA820481 pericardium .c 160 to 664 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
DA823205 pericardium .c 160 to 720 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA823244 pericardium .c 160 to 715 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA964261 stomach .c 160 to 726 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA987732 synovial membrane tissue from rheumatioidarthritis .c 160 to 717 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DT220542 brain .c 161 to 788 1 to 627       627/627
(100 %)
2 diff
(99.7 %id)
CX753936 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 161 to 778 11 to 624     Submitted on the opposite strand 614/745
(82 %)
14 diff
(98.2 %id)
DA011447 adrenal gland .c 162 to 712 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA012265 adrenal gland .c 162 to 719 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA078523 cerebellum .c 162 to 724 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA203236 brain .c 162 to 737 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA368360 subthalamic nucleus .c 162 to 724 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA686972   .c 162 to 706 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA984700 synovial membrane tissue from rheumatioidarthritis .c 162 to 430 2 to 270   capped   269/269
(100 %)
4 diff
(98.6 %id)
DA021794   .c 163 to 673 2 to 512   capped   511/511
(100 %)
0 diff
(100 %id)
DB451161.
matches multiple genes
testis .c 163 to 643 1 to 481     also hits gene riyuri 481/481
(100 %)
1 diff
(99.8 %id)
BP357077 mammary gland .c 163 to 744 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DB135052 thymus .c 163 to 589 2 to 428   capped   427/427
(100 %)
2 diff
(99.6 %id)
DB209836 trachea .c 163 to 719 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA061155 cerebellum .c 164 to 714 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BG470105 adenocarcinoma cell line, colon .c 164 to 802 1 to 638       638/638
(100 %)
9 diff
(98.6 %id)
TI_57215100   .c 164 to 928 21 to 789       769/807
(95 %)
19 diff
(97.7 %id)
DA835737 placenta .c 164 to 465 2 to 303   capped   302/302
(100 %)
0 diff
(100 %id)
DB033671 testis .c 164 to 756 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DB046212 testis .c 165 to 732 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
CN366808 embryonic stem cells, DMSO-treated H9 cellline .c 166 to 859 1 to 695       695/695
(100 %)
1 diff
(99.9 %id)
DB045346 testis .c 166 to 725 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA060792 cerebellum .c 169 to 692 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA616986   .c 169 to 756 2 to 591   capped   590/590
(100 %)
3 diff
(99.5 %id)
BE727223 melanotic melanoma, skin .c 170 to 836 1 to 665       665/668
(99 %)
13 diff
(98.1 %id)
BF026556 melanotic melanoma, skin .c 170 to 885 1 to 713       713/713
(100 %)
11 diff
(98.5 %id)
BE277409 melanotic melanoma, skin .c 171 to 854 1 to 680       680/687
(98 %)
9 diff
(98.7 %id)
BI761620 pooled colon, kidney, stomach .c 173 to 970 1 to 795       795/799
(99 %)
5 diff
(99.4 %id)
TI_57149035   .c 173 to 970 35 to 829       795/833
(95 %)
11 diff
(98.7 %id)
BQ670315 epidermoid carcinoma, cell line, salivary gland .c 174 to 1051 1 to 884       884/964
(91 %)
37 diff
(96.2 %id)
BG329725 eye, retinoblastoma .c 175 to 933 1 to 754       754/920
(81 %)
23 diff
(97.5 %id)
BI161123 epithelioid carcinoma cell line, Pancreas .c 175 to 928 1 to 750       750/840
(89 %)
23 diff
(97.3 %id)
BQ230784 brain .c 175 to 926 16 to 766       751/924
(81 %)
11 diff
(98.9 %id)
BE266805 lung, small cell carcinoma .c 176 to 735 1 to 570       570/570
(100 %)
21 diff
(96.4 %id)
BI752148 brain .c 176 to 928 1 to 757       757/775
(97 %)
14 diff
(98.2 %id)
BI758555 brain .c 177 to 1021 26 to 867       842/867
(97 %)
14 diff
(98.4 %id)
TI_57215693   .c 177 to 1021 26 to 867       842/867
(97 %)
14 diff
(98.4 %id)
TI_57183625   .c 177 to 885 37 to 744       708/752
(94 %)
10 diff
(98.7 %id)
DA693735   .c 177 to 749 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BI767176 pooled lung and spleen .c 178 to 885 1 to 707       707/715
(98 %)
5 diff
(99.4 %id)
BM825064 Ascites, stomach .c 178 to 413 1 to 235       235/235
(100 %)
4 diff
(98.3 %id)
AW954564   .c 179 to 817 9 to 646       638/646
(98 %)
7 diff
(99.0 %id)
BF794839 lymph, lymphoma, cell line .c 179 to 255 1 to 77       77/77
(100 %)
0 diff
(100 %id)
BP330861 rectum .c 179 to 750 1 to 574       574/583
(98 %)
7 diff
(98.8 %id)
CR600183 Neuroblastoma Cot 25-normalized .c 180 to 1959 1 to 1780 exact tiling clone,   1780/1780
(100 %)
0 diff
(100 %id)
BX353787 Neuroblastoma Cot 25-normalized .c 180 to 1079 1 to 887   fully sequenced,   887/887
(100 %)
10 diff
(98.9 %id)
TI_57146826   .c 180 to 899 30 to 750       721/752
(95 %)
8 diff
(99.0 %id)
BQ219546 epithelioid carcinoma, Pancreas .c 181 to 922 1 to 747       747/893
(83 %)
9 diff
(99.0 %id)
BE731584 choriocarcinoma, placenta .c 184 to 733 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
CF138992 CNCAP(3)T-225 cell line, Prostate .c 185 to 671 8 to 493       486/493
(98 %)
8 diff
(98.4 %id)
CF138993 CNCAP(3)T-225 cell line, Prostate .c 185 to 667 8 to 490       483/490
(98 %)
6 diff
(98.8 %id)
TI_154169192   .c 185 to 691 80 to 585       506/506
(100 %)
2 diff
(99.7 %id)
TI_154169194   .c 185 to 691 80 to 586       507/507
(100 %)
0 diff
(100 %id)
BI761132 pooled colon, kidney, stomach .c 187 to 899 1 to 713       713/715
(99 %)
3 diff
(99.6 %id)
AK222908 Kidney .c 188 to 1528 1 to 1341 A217V     1341/1341
(100 %)
1 diff
(100.0 %id)
BP254192 Kidney .c 188 to 771 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BM904788 melanotic melanoma, skin .c 188 to 1034 1 to 857       856/1016
(84 %)
29 diff
(97.2 %id)
BF308776 muscle, rhabdomyosarcoma .c 192 to 903 1 to 705       705/926
(76 %)
25 diff
(97.4 %id)
BF307518 muscle, rhabdomyosarcoma .c 192 to 839 1 to 646       646/646
(100 %)
7 diff
(99.0 %id)
BM825442 Ascites, stomach .c 194 to 364 1 to 171       171/171
(100 %)
2 diff
(98.9 %id)
DA357901 subthalamic nucleus .c 204 to 777 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BG832298 epithelioid carcinoma cell line, Pancreas .c 259 to 929 108 to 788       764/972
(78 %)
48 diff
(95.1 %id)
BM017190 astrocytoma grade IV, cell line, brain .c 339 to 1149 1 to 806       806/806
(100 %)
25 diff
(96.9 %id)
TI_59387439   .c 340 to 1149 100 to 904       805/805
(100 %)
24 diff
(97.1 %id)
BE613819 leiomyosarcoma, uterus .c 351 to 918 1 to 566       566/566
(100 %)
2 diff
(99.7 %id)
BM903591 ovary (pool of 3) .c 354 to 1379 6 to 1044       1039/1047
(99 %)
28 diff
(97.4 %id)
BM921038 pooled brain, lung, testis .c 377 to 1299 1 to 928       928/1017
(91 %)
18 diff
(98.3 %id)
BI457399 epithelioid carcinoma cell line, Pancreas .c 383 to 1205 1 to 821       821/822
(99 %)
16 diff
(98.1 %id)
TI_45133490   .c 383 to 1205 63 to 883       821/822
(99 %)
16 diff
(98.1 %id)
BU540911 epithelioid carcinoma cell line, Pancreas .c 385 to 1225 1 to 848       848/848
(100 %)
8 diff
(99.1 %id)
BC022092 Ovary, adenocarcinoma .c 404 to 1772 1 to 1369 exact available from MGC, AAA   1369/1369
(100 %)
0 diff
(100 %id)
BE745249 adenocarcinoma cell line, ovary .c 422 to 1259 1 to 809       809/1002
(80 %)
50 diff
(95.1 %id)
BM792290 Ascites, stomach .c 430 to 1134 1 to 705       705/705
(100 %)
0 diff
(100 %id)
AK075358   .c 431 to 1779 463 to 1811 exact     1811/1811
(100 %)
1 diff
(100.0 %id)
DA037370   .c 431 to 717 463 to 757   capped   756/802
(94 %)
14 diff
(98.3 %id)
DA052604   .c 431 to 460 463 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DA054411 cerebellum .c 431 to 518 470 to 557   capped   556/557
(99 %)
2 diff
(99.7 %id)
DA067301 cerebellum .c 431 to 540 463 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA070794 cerebellum .c 431 to 488 488 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA074697 cerebellum .c 431 to 526 463 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA137149 alzheimer cortex .c 431 to 515 461 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA207985 brain .c 431 to 512 495 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA253892 caudate nucleus .c 431 to 526 486 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BP206096 coronary artery .c 431 to 540 464 to 574       574/575
(99 %)
10 diff
(98.3 %id)
BP208012 cerebellum .c 431 to 550 463 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP212183 cerebrum .c 431 to 509 495 to 573       573/573
(100 %)
3 diff
(99.5 %id)
CR595506 B cells (Ramos cell line) .c 431 to 1748 449 to 1766 exact     1766/1766
(100 %)
0 diff
(100 %id)
AL560267 B cells (Ramos cell line), B cells from Burkitt lymphoma .c 431 to 933 449 to 947       947/1063
(89 %)
9 diff
(99.2 %id)
BX361751   .c 431 to 865 451 to 882       883/925
(95 %)
37 diff
(96.0 %id)
BE262594 brain, neuroblastoma .c 431 to 736 488 to 798       756/800
(94 %)
22 diff
(97.3 %id)
BG519630 brain, neuroblastoma .c 431 to 668 452 to 690       690/691
(99 %)
12 diff
(98.3 %id)
BF688399 eye, normal pigmented retinal epithelium .c 431 to 659 464 to 699       699/713
(98 %)
36 diff
(95.0 %id)
BF972020 leiomyosarcoma cell line, uterus .c 431 to 771 452 to 787       787/923
(85 %)
17 diff
(98.2 %id)
BG473031 eye, retinoblastoma .c 431 to 624 450 to 644       644/644
(100 %)
5 diff
(99.3 %id)
BI197044 brain, neuroblastoma .c 431 to 598 459 to 640       595/946
(62 %)
30 diff
(96.9 %id)
BI550011 brain, hippocampus .c 431 to 771 484 to 832       830/835
(99 %)
34 diff
(96.0 %id)
BQ227328 embryonal carcinoma, cell line, testis .c 431 to 650 452 to 675       675/935
(72 %)
14 diff
(98.6 %id)
DA603607   .c 431 to 659 492 to 724   capped   723/731
(98 %)
12 diff
(98.4 %id)
DA618203   .c 431 to 516 464 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
TI_44169709   .c 431 to 771 569 to 917       825/920
(89 %)
29 diff
(96.9 %id)
BP273435   .c 431 to 489 492 to 550       550/550
(100 %)
11 diff
(98.0 %id)
DA629668 Kidney .c 431 to 526 492 to 587   capped   586/586
(100 %)
9 diff
(98.5 %id)
DA682410 ovary .c 431 to 513 463 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA688461   .c 431 to 486 489 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA703261   .c 431 to 467 464 to 500   capped   499/499
(100 %)
1 diff
(99.8 %id)
DA728703   .c 431 to 620 488 to 684   capped   681/723
(94 %)
11 diff
(98.5 %id)
DA731397   .c 431 to 695 462 to 727   capped   726/726
(100 %)
9 diff
(98.8 %id)
DA731889   .c 431 to 717 464 to 757   capped   756/768
(98 %)
27 diff
(96.5 %id)
DA846145 placenta .c 431 to 533 463 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA938372 Spleen .c 431 to 577 463 to 609   capped   608/608
(100 %)
1 diff
(99.9 %id)
DB005673 breast, tumor tissue .c 431 to 541 459 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB190155 lung, tumor tissue .c 431 to 544 463 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB202863 trachea .c 431 to 459 495 to 523   capped   522/522
(100 %)
8 diff
(98.5 %id)
BE019793 adenocarcinoma cell line, ovary .c 439 to 924 1 to 486       486/486
(100 %)
0 diff
(100 %id)
BM689364 eye, optic nerve .c 453 to 980 9 to 536       528/536
(98 %)
6 diff
(98.9 %id)
CF141056 CNCAP(3)T-225 cell line, Prostate .c 472 to 781 1 to 310       310/310
(100 %)
7 diff
(97.8 %id)
BX332260 Neuroblastoma Cot 25-normalized .c 494 to 1438 1 to 935 L239W V240*     935/1032
(90 %)
13 diff
(98.8 %id)
BQ962573 epithelioid carcinoma cell line, Pancreas .c 506 to 1365 1 to 867       867/907
(95 %)
11 diff
(98.8 %id)
BE143217 head_neck .c 518 to 687 17 to 188       172/188
(91 %)
12 diff
(93.7 %id)
BU164018 large cell carcinoma, lung .c 530 to 1281 1 to 758       758/890
(85 %)
11 diff
(98.8 %id)
CB140773 Liver .c 553 to 984 1 to 432       432/432
(100 %)
7 diff
(98.4 %id)
Z45903 brain, total brain .c 570 to 846 1 to 277       277/277
(100 %)
6 diff
(97.9 %id)
T09471   .c 570 to 967 1 to 399       399/399
(100 %)
2 diff
(99.5 %id)
AV694992 hepatocellular carcinoma .c 589 to 1010 1 to 417       420/418
(100 %)
7 diff
(98.4 %id)
TI_1948102448   .c 620 to 1445 123 to 948 V5W E6S L7W A8P V9S ... fully sequenced,   826/948
(87 %)
15 diff
(98.5 %id)
TI_1948102621   .c 620 to 870 121 to 371       251/273
(91 %)
6 diff
(97.9 %id)
BU526901 epidermoid carcinoma, cell line, lung .c 623 to 1489 1 to 874 W268L K269E     874/879
(99 %)
9 diff
(99.0 %id)
TI_1948102281   .c 625 to 1390 127 to 900       774/1360
(56 %)
18 diff
(98.7 %id)
TI_1948102780   .c 625 to 1433 126 to 936       811/1161
(69 %)
16 diff
(98.7 %id)
CV027696 mixed .c 627 to 1249 1 to 621       621/621
(100 %)
3 diff
(99.6 %id)
BI855970 breast, mammary adenocarcinoma, cell line .c 682 to 1391 1 to 706       706/706
(100 %)
4 diff
(99.5 %id)
TI_57186446   .c 682 to 1391 48 to 753       706/706
(100 %)
4 diff
(99.5 %id)
BX280373 melanotic melanoma, skin .c 693 to 1193 1 to 501       501/501
(100 %)
0 diff
(100 %id)
BM468165 melanotic melanoma, skin .c 694 to 1551 1 to 869       869/977
(88 %)
20 diff
(98.0 %id)
T32859 brain .c 712 to 954 1 to 243       243/243
(100 %)
1 diff
(99.6 %id)
CR594289 Placenta Cot 25-normalized .c 730 to 1774 1 to 1045       1045/1045
(100 %)
0 diff
(100 %id)
BX339727 Placenta Cot 25-normalized .c 730 to 1765 1 to 1031   fully sequenced,   1031/1031
(100 %)
8 diff
(99.3 %id)
AW961944   .c 742 to 1344 30 to 631       602/638
(94 %)
26 diff
(96.0 %id)
BE790273 large cell carcinoma, lung .c 747 to 1470 1 to 717       717/755
(94 %)
12 diff
(98.5 %id)
BX345478 Neuroblastoma Cot 25-normalized .c 768 to 1759 984 to 6       979/991
(98 %)
17 diff
(98.3 %id)
AA471238   .c 775 to 929 1 to 156       156/177
(88 %)
10 diff
(94.4 %id)
BU944871 adenocarcinoma, cell line, breast .c 832 to 1566 1 to 753       753/1059
(71 %)
28 diff
(97.4 %id)
BI858698 breast, mammary adenocarcinoma, cell line .c 833 to 1638 28 to 834       807/841
(95 %)
16 diff
(98.1 %id)
TI_57191447   .c 833 to 1638 120 to 926       807/841
(95 %)
17 diff
(98.0 %id)
CR596541 neuroblastoma .c 883 to 1774 1 to 892       892/892
(100 %)
0 diff
(100 %id)
AL516514 brain, neuroblastoma, neuroblastoma cells .c 883 to 1774 1 to 892       892/892
(100 %)
9 diff
(99.0 %id)
BX346001   .c 898 to 1741 845 to 1   fully sequenced,   845/845
(100 %)
6 diff
(99.3 %id)
BG217182   .c 926 to 1696 1 to 769       769/769
(100 %)
11 diff
(98.6 %id)
CD634474   .c 926 to 1236 27 to 337       311/337
(92 %)
7 diff
(98.0 %id)
AL581746 B cells (Ramos cell line), B cells from Burkitt lymphoma .c 926 to 1748 821 to 1       821/1047
(78 %)
13 diff
(98.8 %id)
BX356914 Placenta Cot 25-normalized .c 926 to 1727 809 to 1       809/1010
(80 %)
22 diff
(97.9 %id)
AL582549 B cells from Burkitt lymphoma .c 926 to 1735 807 to 1       807/1006
(80 %)
4 diff
(99.7 %id)
TI_1948102449   .c 926 to 1445 634 to 115   fully sequenced,   520/634
(82 %)
0 diff
(100 %id)
AL577746 placenta .c 930 to 1760 827 to 1       827/943
(87 %)
14 diff
(98.6 %id)
BQ301435 bocio_tumor .c 932 to 1477 12 to 556       545/556
(98 %)
6 diff
(99.0 %id)
BE543782 cervical carcinoma cell line, cervix .c 937 to 1542 1 to 614       614/660
(93 %)
31 diff
(95.4 %id)
CD675827 eye, lens .c 965 to 1398 1 to 434       434/434
(100 %)
0 diff
(100 %id)
BG775884 carcinoma, cell line, Prostate .c 968 to 1757 799 to 7       793/942
(84 %)
0 diff
(100 %id)
BX384470   .c 979 to 1949 971 to 1   fully sequenced,   971/971
(100 %)
15 diff
(98.5 %id)
BG164839 hypernephroma, cell line, Kidney .c 986 to 1715 1 to 729       729/733
(99 %)
4 diff
(99.5 %id)
CA389406 eye, RPE/choroid .c 998 to 1612 1 to 615       615/615
(100 %)
0 diff
(100 %id)
TI_149295100   .c 1000 to 1776 851 to 84       768/1014
(75 %)
0 diff
(100 %id)
AL517880 brain, neuroblastoma, neuroblastoma cells .c 1016 to 1958 938 to 1   fully sequenced,   938/938
(100 %)
21 diff
(97.8 %id)
BQ230251 embryonal carcinoma, cell line, testis .c 1029 to 1736 1 to 711       711/817
(87 %)
4 diff
(99.6 %id)
BF688874 eye, normal pigmented retinal epithelium .c 1037 to 1964 931 to 4       928/973
(95 %)
0 diff
(100 %id)
TI_149290442   .c 1043 to 1779 810 to 80   AAA   731/798
(91 %)
10 diff
(98.8 %id)
BE966197 leiomyosarcoma, uterus .c 1047 to 1772 750 to 15   AAA   736/848
(86 %)
57 diff
(93.3 %id)
BG025358 lymph, lymphoma, cell line .c 1047 to 1754 1 to 698       698/860
(81 %)
15 diff
(98.3 %id)
BX353786 Neuroblastoma Cot 25-normalized .c 1049 to 1959 897 to 1   fully sequenced,   897/897
(100 %)
7 diff
(99.3 %id)
TI_149303114   .c 1059 to 1779 830 to 112   AAA   719/916
(78 %)
24 diff
(97.4 %id)
BE614428 leiomyosarcoma, uterus .c 1064 to 1738 718 to 40       679/1040
(65 %)
16 diff
(98.5 %id)
BM985225 lung .c 1065 to 1776 728 to 19   AAA   710/710
(100 %)
3 diff
(99.6 %id)
BE748797 bone marrow, from acute myelogenous leukemia .c 1087 to 1921 844 to 27       818/1046
(78 %)
0 diff
(100 %id)
BM973436 lung .c 1112 to 1779 683 to 19   AAA   665/665
(100 %)
4 diff
(99.4 %id)
BM761777 lymph node, stomach .c 1132 to 1636 1 to 505       505/505
(100 %)
0 diff
(100 %id)
BM840075 lymph node, stomach .c 1132 to 1595 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
BM840810 lymph node, stomach .c 1132 to 1640 1 to 509       509/509
(100 %)
5 diff
(99.1 %id)
BM842144 lymph node, stomach .c 1132 to 1779 1 to 648   AAA   648/648
(100 %)
0 diff
(100 %id)
BU623893 cell lines, Enchondroma .c 1140 to 1779 657 to 19   AAA   639/639
(100 %)
2 diff
(99.7 %id)
CA432181 cell lines, Enchondroma .c 1140 to 1772 648 to 19   AAA   630/630
(100 %)
5 diff
(99.3 %id)
BX345477 Neuroblastoma Cot 25-normalized .c 1148 to 1718 571 to 1       571/671
(85 %)
11 diff
(98.4 %id)
BX394188 Neuroblastoma Cot 25-normalized .c 1168 to 1762 594 to 1       594/594
(100 %)
19 diff
(96.9 %id)
BE297345 muscle, rhabdomyosarcoma .c 1175 to 1773 1 to 597       597/597
(100 %)
2 diff
(99.7 %id)
AA373341 lung .c 1183 to 1391 1 to 209       209/209
(100 %)
0 diff
(100 %id)
AL562257 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 1185 to 1751 572 to 1       572/973
(58 %)
47 diff
(95.2 %id)
BM981181 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1197 to 1779 600 to 19   AAA   582/582
(100 %)
15 diff
(97.5 %id)
BE019395 muscle, rhabdomyosarcoma .c 1198 to 1545 1 to 348   fully sequenced,   348/348
(100 %)
9 diff
(97.5 %id)
TI_1948102622   .c 1200 to 1445 358 to 113       246/263
(93 %)
0 diff
(100 %id)
BX339726 Placenta Cot 25-normalized .c 1211 to 1740 530 to 1   fully sequenced,   530/530
(100 %)
2 diff
(99.7 %id)
BX331140   .c 1214 to 1762 549 to 1       549/549
(100 %)
3 diff
(99.5 %id)
BU619379 cell lines, Chondrosarcoma .c 1217 to 1772 574 to 19   AAA   556/556
(100 %)
0 diff
(100 %id)
DB384414   .c 1228 to 1772 546 to 1       546/548
(99 %)
8 diff
(98.6 %id)
BJ994242 hepatoblastoma .c 1231 to 1744 514 to 1       514/514
(100 %)
0 diff
(100 %id)
DB353273   .c 1234 to 1772 541 to 1       541/542
(99 %)
10 diff
(98.2 %id)
AI937468 anaplastic oligodendroglioma, brain .c 1259 to 1774 516 to 1       516/516
(100 %)
1 diff
(99.9 %id)
BX373420 Placenta Cot 25-normalized .c 1275 to 1974 706 to 5       702/836
(83 %)
0 diff
(100 %id)
AI949605 anaplastic oligodendroglioma, brain .c 1287 to 1772 509 to 23   AAA   487/487
(100 %)
5 diff
(99.0 %id)
AA830777 germinal center B cell .c 1295 to 1772 495 to 21   AAA   475/475
(100 %)
7 diff
(98.6 %id)
AW080268 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1295 to 1772 477 to 1       477/477
(100 %)
4 diff
(99.2 %id)
CN366807 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1297 to 1772 1 to 476   AAA   476/476
(100 %)
6 diff
(98.8 %id)
AI885004 anaplastic oligodendroglioma, brain .c 1309 to 1774 472 to 7       466/472
(98 %)
0 diff
(100 %id)
AW149662 brain, medulloblastoma .c 1311 to 1774 465 to 1       465/465
(100 %)
2 diff
(99.6 %id)
AI363027 anaplastic oligodendroglioma, brain .c 1329 to 1773 445 to 1       445/445
(100 %)
2 diff
(99.6 %id)
BE301723 cervical carcinoma cell line, cervix .c 1331 to 1772 442 to 1       442/442
(100 %)
6 diff
(98.7 %id)
BE206358 adenocarcinoma cell line, ovary .c 1335 to 1772 461 to 24   AAA   438/438
(100 %)
10 diff
(97.8 %id)
AW572395 colon, moderately-differentiated adenocarcinoma .c 1347 to 1778 434 to 3       432/434
(99 %)
0 diff
(100 %id)
DB371501 ovary, tumor tissue .c 1360 to 1933 576 to 1       576/577
(99 %)
13 diff
(97.8 %id)
CB054313 brain, glioblastoma (pooled) .c 1373 to 1779 434 to 27   AAA   408/409
(99 %)
1 diff
(99.8 %id)
DB353745   .c 1395 to 1985 608 to 20   AAA   589/707
(83 %)
20 diff
(97.2 %id)
AW016915   .c 1407 to 1772 383 to 18   AAA   366/460
(79 %)
1 diff
(99.8 %id)
DB363558   .c 1408 to 1980 572 to 1       572/572
(100 %)
7 diff
(98.8 %id)
BX372975 Neuroblastoma Cot 50-normalized .c 1413 to 1761 359 to 10       350/412
(84 %)
0 diff
(100 %id)
AW016533   .c 1415 to 1772 376 to 18   AAA   359/368
(97 %)
4 diff
(99.0 %id)
DB303761 brain .c 1432 to 1979 546 to 2       545/546
(99 %)
0 diff
(100 %id)
DW432717 Liver .c 1434 to 1679 16 to 265       250/265
(94 %)
6 diff
(97.8 %id)
DB383910   .c 1438 to 1986 544 to 1   tiling clone,   544/549
(99 %)
10 diff
(98.2 %id)
AI242484 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1450 to 1774 329 to 5       325/329
(98 %)
0 diff
(100 %id)
AI368386 brain, glioblastoma (pooled) .c 1451 to 1780 331 to 1       331/332
(99 %)
6 diff
(98.2 %id)
DB369436   .c 1462 to 1986 525 to 1       525/525
(100 %)
10 diff
(98.1 %id)
AI287711 ovary, tumor, 5 pooled (see description) .c 1471 to 1772 302 to 1       302/302
(100 %)
3 diff
(99.1 %id)
BM673020 eye, optic nerve .c 1484 to 1980 515 to 19   AAA   497/497
(100 %)
0 diff
(100 %id)
AA991234 breast .c 1502 to 1774 273 to 1       273/273
(100 %)
8 diff
(97.1 %id)
BE205919 muscle, rhabdomyosarcoma .c 1515 to 1777 263 to 1   fully sequenced,   263/263
(100 %)
3 diff
(98.9 %id)
AA350197 brain .c 1522 to 1772 251 to 1       251/251
(100 %)
2 diff
(99.3 %id)
AA397384   .c 1556 to 1774 30 to 246       217/247
(87 %)
1 diff
(99.6 %id)
AA535011 colon .c 1558 to 1774 223 to 8       216/223
(96 %)
0 diff
(100 %id)
BI518622 leukocyte .c 1564 to 1779 1 to 215   AAA   215/215
(100 %)
3 diff
(98.7 %id)
AW470485 colon, moderately-differentiated adenocarcinoma .c 1569 to 1778 212 to 3       210/212
(99 %)
0 diff
(100 %id)
AI222586 Kidney .c 1576 to 1772 197 to 1       197/197
(100 %)
3 diff
(98.5 %id)
Z41530 brain, total brain .c 1677 to 1985 309 to 1       309/309
(100 %)
1 diff
(99.7 %id)
BI764554 pooled colon, kidney, stomach .c 1775 to 1980 1 to 206   AAA   206/206
(100 %)
1 diff
(99.6 %id)
CR625812 Placenta Cot 25-normalized .d 1 to 1559 2 to 1560 exact tiling clone,   1560/1560
(100 %)
0 diff
(100 %id)
BX342021   .d 5 to 429 1 to 425       425/425
(100 %)
4 diff
(99.1 %id)
BM696987 eye, lens .d 36 to 621 9 to 594       586/594
(98 %)
6 diff
(99.0 %id)
BX342020   .d 1115 to 1573 459 to 1       459/459
(100 %)
3 diff
(99.4 %id)
BM668018 eye, lens .d 1135 to 1604 488 to 19   tiling clone, AAA   470/470
(100 %)
1 diff
(99.8 %id)
AI004199   .e-u 1 to 369 374 to 6 exact tiling clone,   369/374
(98 %)
0 diff
(100 %id)
R68518 placenta .e-u 95 to 492 1 to 402   tiling clone, fully sequenced,   402/402
(100 %)
17 diff
(95.8 %id)
AI743964 Kidney .e-u 408 to 675 282 to 15   tiling clone, AAA   268/268
(100 %)
1 diff
(99.7 %id)
R68222 placenta .e-u 462 to 822 374 to 1   tiling clone, fully sequenced,   374/374
(100 %)
13 diff
(96.6 %id)
DB031452 testis .f-u 1 to 614 2 to 615 exact tiling clone, capped   614/614
(100 %)
0 diff
(100 %id)
DA665165   Gene C12orf52, variant not shown       capped      
CB126126 Liver Gene C12orf52, variant not shown              
DB552880.
matches multiple genes
hippocampus Gene C12orf52, variant not shown         This clone was ignored, also hits gene riyuri    
DB552880.
matches multiple genes
hippocampus Gene riyuri, variant not shown         This clone was ignored, also hits gene riyuri    
DB483911.
matches multiple genes
hippocampus Gene C12orf52, variant not shown         This clone was ignored, also hits gene riyuri    
DB483911.
matches multiple genes
hippocampus Gene riyuri, variant not shown         This clone was ignored, also hits gene riyuri    
DA048502   Gene C12orf52, variant not shown       capped      
DA518741 brain Gene C12orf52, variant not shown       capped      
BP212710 cerebrum Gene C12orf52, variant not shown         Suspected internal deletion, this clone was ignored    
DA011223 adrenal gland Gene C12orf52, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA482037   Gene C12orf52, variant not shown       capped Suspected internal deletion, this clone was ignored    
AK123762   Gene C12orf52, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
DB320098   Gene C12orf52, variant not shown         Suspected internal deletion, this clone was ignored    
DA608997   Gene C12orf52, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA705069   Gene C12orf52, variant not shown       capped      
AK027741 ovary, tumor tissue Gene C12orf52, variant not shown       available from FLJ, This clone was ignored    
DA566766 heart Gene C12orf52, variant not shown       capped      
DA767395 tongue Gene C12orf52, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB371752 ovary, tumor tissue Gene C12orf52, variant not shown         This clone was ignored    
DA812397 ovary, tumor tissue Gene C12orf52, variant not shown       capped This clone was ignored    
DA084324 cerebellum Gene C12orf52, variant not shown       capped      
DA087593 cerebellum Gene C12orf52, variant not shown       capped      
DA508991 brain Gene C12orf52, variant not shown       capped      
AI392897 B-cell, chronic lymphotic leukemia Gene C12orf52, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BF684766 leiomyosarcoma cell line, uterus Gene C12orf52, variant not shown              
BQ425232 melanotic melanoma, skin Gene C12orf52, variant not shown         Suspected internal deletion, this clone was ignored    
BU195118 melanotic melanoma, skin Gene C12orf52, variant not shown              
TI_57148856   Gene C12orf52, variant not shown         This clone was ignored    
DB035423 testis Gene C12orf52, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB337385 testis Gene C12orf52, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C