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Gene RPL41andZC3H10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
617 representative clones for gene RPL41andZC3H10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB453305 testis .a 1 to 508 1 to 508   tiling clone,   508/508
(100 %)
1 diff
(99.9 %id)
DA050357   .a 63 to 593 2 to 535   capped   534/534
(100 %)
3 diff
(99.5 %id)
DA110210 cerebellum .a 63 to 627 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA224738 brain .a 63 to 622 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA112773 cerebellum .a 71 to 668 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA083074 cerebellum .a 74 to 593 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
BI520255 brain, medulla .a 74 to 825 1 to 754       754/754
(100 %)
4 diff
(99.5 %id)
TI_43963111   .a 74 to 825 30 to 783       754/783
(96 %)
8 diff
(99.0 %id)
TI_57150241   .a 80 to 895 65 to 899       725/899
(80 %)
27 diff
(97.0 %id)
DA145073 amygdala .a 83 to 570 2 to 491   capped   490/490
(100 %)
3 diff
(99.4 %id)
DY655440 pooled .a 83 to 520 439 to 1       439/439
(100 %)
1 diff
(99.8 %id)
BI763015 pooled colon, kidney, stomach .a 84 to 895 1 to 831       721/831
(86 %)
21 diff
(97.5 %id)
DA873232 Prostate .a 85 to 645 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
AK027357 whole embryo, mainly body .a 88 to 2208 1 to 2121   available from FLJ,   2121/2121
(100 %)
2 diff
(100.0 %id)
AU279921   .a 88 to 658 1 to 571       571/571
(100 %)
0 diff
(100 %id)
NM_032786.1   .a 88 to 2208 1 to 2121   RefSeq,   2121/2121
(100 %)
2 diff
(100.0 %id)
DA070795 cerebellum .a 89 to 651 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA572771 whole embryo, mainly body .a 89 to 859 2 to 777   capped   776/785
(98 %)
8 diff
(99.0 %id)
DA841306 placenta .a 89 to 639 2 to 552   capped   551/553
(99 %)
2 diff
(99.7 %id)
DB033270 testis .a 89 to 667 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA424469   .a 97 to 657 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BG719764 testis .a 97 to 303 1 to 207       207/207
(100 %)
3 diff
(98.6 %id)
BX642472   .a 99 to 789 1 to 691       691/698
(98 %)
4 diff
(99.5 %id)
BF204026 muscle, rhabdomyosarcoma .a 99 to 877 1 to 773       773/774
(99 %)
28 diff
(96.4 %id)
BC018708 Muscle, rhabdomyosarcoma .a 100 to 2208 1 to 2109   tiling clone, available from MGC, AAA   2109/2109
(100 %)
0 diff
(100 %id)
TI_1210518222   .a 100 to 566 1 to 465       465/803
(57 %)
8 diff
(99.1 %id)
DA819719   .a 101 to 609 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
CB148206 brain .a 102 to 586 1 to 485       485/485
(100 %)
0 diff
(100 %id)
BP332226 renal proximal tubule .a 102 to 684 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DB124664 thymus .a 102 to 616 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
DA755038   .a 103 to 641 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA799537 brain .a 103 to 657 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA901276   .a 103 to 593 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DA999611 breast, tumor tissue .a 103 to 679 2 to 578   capped   577/578
(99 %)
2 diff
(99.7 %id)
DB122614 thymus .a 103 to 609 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
DB124393 thymus .a 103 to 652 2 to 551   capped   550/557
(98 %)
2 diff
(99.7 %id)
DB124489 thymus .a 103 to 675 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB257646 uterus .a 103 to 682 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA026441   .a 104 to 568 2 to 469   capped   468/468
(100 %)
5 diff
(99.0 %id)
DA543082   .a 104 to 660 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA729856   .a 104 to 890 2 to 793   capped   792/793
(99 %)
13 diff
(98.4 %id)
DA749731   .a 104 to 669 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA811203 brain .a 104 to 593 2 to 491   capped   490/490
(100 %)
1 diff
(99.8 %id)
DA815209   .a 104 to 671 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB209468 trachea .a 104 to 622 2 to 521   capped   520/520
(100 %)
2 diff
(99.7 %id)
DB252178 uterus .a 104 to 684 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
CV809374 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 105 to 942 1 to 847       847/873
(97 %)
23 diff
(97.4 %id)
DA636536 Kidney .a 105 to 616 2 to 513   capped   512/512
(100 %)
1 diff
(99.9 %id)
DB090761 testis .a 105 to 672 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB143816 thymus .a 105 to 671 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB157655 thymus .a 105 to 700 2 to 599   capped   598/598
(100 %)
2 diff
(99.7 %id)
DA083069 cerebellum .a 106 to 692 2 to 589   capped   588/589
(99 %)
2 diff
(99.7 %id)
BP254679 Kidney .a 108 to 681 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DA016670 adrenal gland .a 109 to 655 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA077476 cerebellum .a 109 to 681 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA089518 cerebellum .a 109 to 669 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA106055 cerebellum .a 109 to 653 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA318649 hippocampus .a 109 to 679 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA420018 cord Blood .a 109 to 682 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA436334 tongue, tumor tissue .a 109 to 678 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA505934 brain .a 109 to 669 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA684470   .a 109 to 652 2 to 546   capped   545/545
(100 %)
3 diff
(99.5 %id)
DA838403 placenta .a 109 to 678 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA903903   .a 109 to 667 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DB129930 thymus .a 109 to 678 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB286654 uterus .a 109 to 651 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
BP217410 caudate nucleus .a 111 to 695 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
TI_57149570   .a 111 to 925 28 to 839       812/841
(96 %)
17 diff
(98.0 %id)
DA310119 hippocampus .a 112 to 691 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA543354   .a 112 to 680 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA625178 Kidney .a 112 to 669 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA956538 Spleen .a 112 to 661 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DB005030 breast, tumor tissue .a 112 to 655 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BI759552 pooled colon, kidney, stomach .a 114 to 925 1 to 809       809/811
(99 %)
11 diff
(98.7 %id)
BX333952 Neuroblastoma Cot 50-normalized .a 123 to 905 1 to 783       783/783
(100 %)
3 diff
(99.7 %id)
DA559498 heart .a 123 to 740 2 to 619   capped   618/618
(100 %)
2 diff
(99.7 %id)
DB003210 breast, tumor tissue .a 123 to 658 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DY655439 pooled .a 125 to 552 1 to 428       428/428
(100 %)
0 diff
(100 %id)
CR613256 Placenta Cot 25-normalized .a 126 to 2191 1 to 2066       2066/2066
(100 %)
0 diff
(100 %id)
BX334595 Placenta Cot 25-normalized .a 126 to 1064 1 to 930       930/935
(99 %)
11 diff
(98.9 %id)
DR001178 fetal brain .a 127 to 966 1 to 841       841/841
(100 %)
6 diff
(99.3 %id)
DA428699 colon .a 133 to 678 2 to 548   capped   547/549
(99 %)
3 diff
(99.5 %id)
DB277498 uterus .a 133 to 657 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DA012144 adrenal gland .a 139 to 696 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA278947 corpus callosum .a 139 to 705 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
CF137182 lymph .a 139 to 355 8 to 224       217/224
(96 %)
32 diff
(85.8 %id)
BQ421088 embryonal carcinoma, cell line, testis .a 141 to 926 1 to 796       796/942
(84 %)
34 diff
(96.4 %id)
BX331659 Neuroblastoma Cot 10-normalized .a 158 to 991 1 to 834       834/834
(100 %)
0 diff
(100 %id)
BQ050247 leiomyosarcoma, uterus .a 164 to 982 1 to 833       833/985
(84 %)
32 diff
(96.8 %id)
CV029192 mixed .a 277 to 941 1 to 665       665/666
(99 %)
3 diff
(99.6 %id)
TI_1948128131   .a 277 to 1091 131 to 965       835/1185
(70 %)
30 diff
(97.5 %id)
TI_1948128465   .a 277 to 795 133 to 654       522/1154
(45 %)
14 diff
(98.8 %id)
TI_1948128466   .a 277 to 1102 137 to 966       830/1177
(70 %)
25 diff
(97.9 %id)
TI_1948128808   .a 277 to 1064 129 to 928       800/1207
(66 %)
27 diff
(97.8 %id)
TI_1948129137   .a 277 to 785 131 to 638       508/1146
(44 %)
16 diff
(98.7 %id)
TI_1948129138   .a 277 to 1043 138 to 909       772/1249
(61 %)
18 diff
(98.6 %id)
CA455322 adenocarcinoma, cell line, breast .a 283 to 1107 1 to 839       839/886
(94 %)
20 diff
(97.8 %id)
TI_1948129139   .a 666 to 1580 1044 to 125       920/1391
(66 %)
0 diff
(100 %id)
TI_1948128809   .a 726 to 1580 972 to 125       848/1366
(62 %)
0 diff
(100 %id)
TI_1948128468   .a 749 to 1580 955 to 122       834/1062
(78 %)
0 diff
(100 %id)
BX280083 adrenal cortex carcinoma, cell line, adrenal gland .a 756 to 1224 1 to 469       469/469
(100 %)
0 diff
(100 %id)
BF969197 adrenal cortex carcinoma, cell line, adrenal gland .a 756 to 1299 13 to 558       546/559
(97 %)
4 diff
(99.3 %id)
TI_1948128133   .a 848 to 1580 855 to 126       730/1064
(68 %)
0 diff
(100 %id)
TI_1948128132   .a 854 to 1580 861 to 126       736/1452
(50 %)
0 diff
(100 %id)
TI_1948128810   .a 854 to 1580 857 to 128       730/1069
(68 %)
0 diff
(100 %id)
AW749469 breast .a 941 to 1177 1 to 237       237/270
(87 %)
2 diff
(99.3 %id)
TI_1948129140   .a 990 to 1580 720 to 128       593/1088
(54 %)
0 diff
(100 %id)
W68106 heart .a 1106 to 1611 1 to 501       501/501
(100 %)
6 diff
(98.9 %id)
BE162986 head_neck .a 1153 to 1353 10 to 208       199/208
(95 %)
6 diff
(97.2 %id)
BX334594 Placenta Cot 25-normalized .a 1203 to 2141 974 to 48       927/977
(94 %)
0 diff
(100 %id)
AA190515   .a 1295 to 1449 1 to 155       155/155
(100 %)
0 diff
(100 %id)
TI_149311510   .a 1366 to 2205 925 to 90   AAA   836/964
(86 %)
12 diff
(98.8 %id)
CD634322   .a 1381 to 1826 1 to 444       444/449
(98 %)
10 diff
(97.8 %id)
BQ000497 Fibrosarcoma .a 1425 to 2208 799 to 16   AAA   784/784
(100 %)
2 diff
(99.8 %id)
BU689451 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1468 to 2205 756 to 19   AAA   738/740
(99 %)
2 diff
(99.8 %id)
BU621020 cell lines, Chondrosarcoma .a 1518 to 2208 708 to 19   AAA   690/690
(100 %)
3 diff
(99.6 %id)
AA035476 uterus .a 1606 to 1936 1 to 334   fully sequenced,   334/334
(100 %)
3 diff
(99.2 %id)
FN174770 breast carcinoma .a 1640 to 1751 1 to 111       111/111
(100 %)
1 diff
(99.1 %id)
AA654323   .a 1666 to 1947 1 to 281       281/285
(98 %)
6 diff
(97.9 %id)
BG104381 melanotic melanoma, skin .a 1667 to 2461 1 to 792       792/918
(86 %)
24 diff
(97.4 %id)
BG475694 melanotic melanoma, skin .a 1667 to 2005 1 to 340       340/563
(60 %)
5 diff
(99.2 %id)
AA654312   .a 1668 to 1992 1 to 320       320/320
(100 %)
12 diff
(96.3 %id)
DB331134   .a 1671 to 2208 538 to 1       538/539
(99 %)
0 diff
(100 %id)
AW974979   .a 1672 to 2214 41 to 586       546/671
(81 %)
10 diff
(98.6 %id)
AA653919   .a 1672 to 2063 8 to 399       392/399
(98 %)
6 diff
(98.5 %id)
BE389268 endometrium, adenocarcinoma cell line, uterus .a 1684 to 2294 1 to 625       625/625
(100 %)
18 diff
(97.2 %id)
BE409120 choriocarcinoma, placenta .a 1686 to 2328 1 to 650       650/682
(95 %)
22 diff
(96.8 %id)
BE389206 endometrium, adenocarcinoma cell line, uterus .a 1687 to 2383 1 to 689       689/689
(100 %)
21 diff
(97.0 %id)
BE407295 choriocarcinoma, placenta .a 1687 to 2331 1 to 640       640/644
(99 %)
9 diff
(98.7 %id)
BE408368 choriocarcinoma, placenta .a 1688 to 2357 1 to 666       666/693
(96 %)
14 diff
(98.0 %id)
AI969773 pooled germ cell tumors .a 1699 to 2208 510 to 1       510/510
(100 %)
0 diff
(100 %id)
AW304354 lung, two pooled squamous cell carcinomas .a 1724 to 2208 485 to 1       485/485
(100 %)
1 diff
(99.8 %id)
BF732241 fibrotheoma, ovary .a 1728 to 2179 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
AA190841   .a 1750 to 2210 459 to 1       459/459
(100 %)
5 diff
(99.0 %id)
AI392828 B-cell, chronic lymphotic leukemia .a 1767 to 2209 443 to 1       443/443
(100 %)
0 diff
(100 %id)
DB318637 heart .a 1793 to 2208 420 to 1       420/519
(80 %)
14 diff
(97.4 %id)
AW272428 colon, moderately-differentiated adenocarcinoma .a 1797 to 2209 413 to 1       413/413
(100 %)
0 diff
(100 %id)
AI091077 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1846 to 2207 364 to 4       361/364
(99 %)
0 diff
(100 %id)
AA035449 uterus .a 1906 to 2205 304 to 1   fully sequenced,   304/304
(100 %)
3 diff
(99.1 %id)
AW135706   .a 1906 to 2208 320 to 18   AAA   303/303
(100 %)
1 diff
(99.7 %id)
AW172460 pooled .a 1910 to 2211 302 to 1       302/302
(100 %)
0 diff
(100 %id)
BF691170 melanotic melanoma, high MDR, skin .a 1968 to 2743 1 to 776       776/1056
(73 %)
42 diff
(96.1 %id)
AI758611 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1970 to 2208 239 to 1       239/239
(100 %)
0 diff
(100 %id)
AI192987 lung .a 2028 to 2444 420 to 4       417/420
(99 %)
0 diff
(100 %id)
DB518783 testis .a 2067 to 2208 1 to 142     Submitted on the opposite strand 142/142
(100 %)
1 diff
(99.3 %id)
CR739913 colon .a 2148 to 2494 32 to 378   tiling clone,   347/380
(91 %)
1 diff
(99.8 %id)
BQ448544 Knee, Osteoarthritic Cartilage .a 2484 to 3069 604 to 19   tiling clone, AAA   586/586
(100 %)
0 diff
(100 %id)
AI939459 brain, glioblastoma (pooled) .a 2542 to 3063 522 to 1       522/522
(100 %)
0 diff
(100 %id)
BQ932036 epidermoid carcinoma, cell line, lung .a 2559 to 3480 1 to 932   tiling clone,   932/944
(98 %)
26 diff
(97.3 %id)
AI832623 colon .a 2595 to 3069 476 to 1       476/476
(100 %)
3 diff
(99.4 %id)
AI419507 brain, glioblastoma (pooled) .a 2600 to 3063 462 to 1       462/462
(100 %)
2 diff
(99.6 %id)
AI095114 brain, glioblastoma (pooled) .a 2619 to 3071 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AW672665 cervix .a 3223 to 3495 1 to 278   tiling clone,   278/278
(100 %)
7 diff
(97.5 %id)
AW504227 lymph .a 3363 to 3793 8 to 438       431/438
(98 %)
6 diff
(98.7 %id)
TI_154160316   .a 3363 to 3906 84 to 627   tiling clone,   544/544
(100 %)
2 diff
(99.7 %id)
BE501010 pooled germ cell tumors .a 3786 to 4402 616 to 1   tiling clone,   616/616
(100 %)
3 diff
(99.6 %id)
BM996097 lung, Metastatic Chondrosarcoma .a 3872 to 4444 587 to 15   AAA   573/573
(100 %)
2 diff
(99.7 %id)
AI217892   .a 3958 to 4241 284 to 1       284/284
(100 %)
0 diff
(100 %id)
AW675417 cervix .a 3978 to 4448 472 to 2       471/472
(99 %)
0 diff
(100 %id)
AA904967 pooled .a 4005 to 4204 200 to 1       200/200
(100 %)
0 diff
(100 %id)
AA993310   .a 4014 to 4462 463 to 15   AAA   449/449
(100 %)
2 diff
(99.6 %id)
AI864180 pooled .a 4101 to 4462 375 to 14   AAA   362/362
(100 %)
0 diff
(100 %id)
BE218067 carcinoid, lung .a 4135 to 4599 465 to 1   tiling clone,   465/465
(100 %)
0 diff
(100 %id)
AI383028 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4236 to 4463 225 to 1       225/225
(100 %)
3 diff
(98.7 %id)
AL528945 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 1 to 874 1 to 871   tiling clone,   871/871
(100 %)
5 diff
(99.5 %id)
BQ073665 epidermoid carcinoma, cell line, lung .b 213 to 1134 1 to 927   tiling clone,   927/987
(93 %)
17 diff
(98.3 %id)
BQ893785 dorsal root ganglia .b 269 to 1137 1 to 876   tiling clone,   876/892
(98 %)
35 diff
(96.1 %id)
DB039677 testis .b 432 to 993 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
AL563294 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .b 1865 to 2794 930 to 1   tiling clone,   930/930
(100 %)
8 diff
(99.2 %id)
TI_57185930   .c 1 to 408 47 to 454 exact tiling clone, AAA   408/408
(100 %)
0 diff
(100 %id)
BF209823 bone marrow, from chronic myelogenous leukemia .d 1 to 333 3 to 334 exact tiling clone,   334/334
(100 %)
1 diff
(99.8 %id)
BP421738 small intestine .d 27 to 454 8 to 436 exact tiling clone, Submitted on the opposite strand 429/430
(99 %)
3 diff
(99.4 %id)
CN431860 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 40 to 450 1 to 411 exact     411/413
(99 %)
2 diff
(99.6 %id)
BG611130 adenocarcinoma, Prostate .e 1 to 348 1 to 349 exact tiling clone,   349/349
(100 %)
2 diff
(99.5 %id)
NM_021104.1   .e 2 to 469 1 to 468 exact RefSeq, AAA   468/468
(100 %)
0 diff
(100 %id)
Z12962 ovary .e 2 to 469 1 to 468 exact tiling clone, AAA   468/468
(100 %)
0 diff
(100 %id)
BC102009 PCR rescued clones .e 3 to 235 1 to 233 exact     233/233
(100 %)
0 diff
(100 %id)
BC102008 PCR rescued clones .e 3 to 235 1 to 233 exact     233/233
(100 %)
0 diff
(100 %id)
BC102007 PCR rescued clones .e 3 to 235 1 to 233 exact     233/233
(100 %)
0 diff
(100 %id)
BC105286 Brain, glioblastoma .e 40 to 464 1 to 425 exact AAA   425/425
(100 %)
4 diff
(99.1 %id)
BC105799 Pooled, 40 cell lines .e 40 to 470 1 to 431 exact AAA   431/431
(100 %)
6 diff
(98.7 %id)
BC105795.
matches multiple genes
Lung, mucoepidermoid carcinoma .e 41 to 423 1 to 383 exact tiling clone, AAA also hits gene fortey, RPL41P5 383/383
(100 %)
4 diff
(99.0 %id)
BM841139 lymph node, stomach .e 42 to 463 9 to 430 exact     422/422
(100 %)
0 diff
(100 %id)
BC014383 Brain, primitive neuroectodermal .e 44 to 460 5 to 420 exact available from MGC, AAA   416/416
(100 %)
1 diff
(99.8 %id)
BC070254 Pooled, 40 cell lines .e 44 to 452 1 to 409 exact available from MGC, AAA   409/409
(100 %)
0 diff
(100 %id)
BM840754 lymph node, stomach .e 44 to 463 9 to 428 exact     420/420
(100 %)
0 diff
(100 %id)
AV734259 pheochromocytoma .e 45 to 464 1 to 420 exact AAA   420/420
(100 %)
0 diff
(100 %id)
AV715040   .e 45 to 469 1 to 425 exact AAA   425/425
(100 %)
0 diff
(100 %id)
AV714351   .e 45 to 464 1 to 420 exact AAA   420/420
(100 %)
0 diff
(100 %id)
BJ995772 hepatoblastoma .e 45 to 465 1 to 421 exact     421/421
(100 %)
0 diff
(100 %id)
BC015984 Brain, glioblastoma .e 45 to 469 5 to 429 exact available from MGC, AAA   425/425
(100 %)
1 diff
(99.8 %id)
BC070252 lung .e 45 to 464 1 to 421 exact available from MGC, AAA   421/421
(100 %)
4 diff
(99.1 %id)
BC070253 Pooled, 40 cell lines .e 45 to 457 1 to 413 exact available from MGC, AAA   413/413
(100 %)
0 diff
(100 %id)
BC070255 Pooled, 40 cell lines .e 45 to 463 1 to 419 exact available from MGC, AAA   419/419
(100 %)
2 diff
(99.6 %id)
CB110439 Liver .e 45 to 461 9 to 425 exact     417/417
(100 %)
0 diff
(100 %id)
CB114437 Liver .e 45 to 464 1 to 420 exact     420/420
(100 %)
0 diff
(100 %id)
CB112731 Liver .e 45 to 468 1 to 424 exact     424/424
(100 %)
0 diff
(100 %id)
AV758909 bone marrow .e 45 to 456 1 to 412 exact AAA   412/412
(100 %)
0 diff
(100 %id)
AV763209 bone marrow .e 45 to 464 1 to 420 exact     420/420
(100 %)
0 diff
(100 %id)
AV762455 bone marrow .e 45 to 465 1 to 421 exact     421/421
(100 %)
0 diff
(100 %id)
DB329451 Prostate .e 45 to 457 413 to 1 exact     413/413
(100 %)
0 diff
(100 %id)
BM834756 stomach .e 45 to 425 1 to 381 exact     381/381
(100 %)
0 diff
(100 %id)
BM840097 lymph node, stomach .e 45 to 468 1 to 424 exact     424/424
(100 %)
0 diff
(100 %id)
BM838741 lymph node, stomach .e 45 to 464 1 to 420 exact     420/420
(100 %)
0 diff
(100 %id)
BM841497 lymph node, stomach .e 45 to 468 1 to 424 exact     424/424
(100 %)
0 diff
(100 %id)
BM841553 lymph node, stomach .e 45 to 465 11 to 431 exact     421/421
(100 %)
0 diff
(100 %id)
BM781461 lymph node, stomach .e 45 to 468 11 to 434 exact     424/424
(100 %)
0 diff
(100 %id)
BM770043 stomach .e 45 to 463 1 to 419 exact     419/419
(100 %)
0 diff
(100 %id)
BM856566 stomach .e 45 to 452 1 to 408 exact     408/408
(100 %)
0 diff
(100 %id)
BM797402 stomach .e 45 to 464 1 to 420 exact     420/420
(100 %)
0 diff
(100 %id)
BE833032.
matches multiple genes
ovary .e 46 to 184 139 to 1 exact tiling clone, also hits gene wuslawbu 139/139
(100 %)
0 diff
(100 %id)
AU122909   .e 46 to 464 2 to 420 exact capped   419/419
(100 %)
0 diff
(100 %id)
AU122982   .e 46 to 469 2 to 425 exact capped   424/424
(100 %)
0 diff
(100 %id)
DA901774   .e 46 to 463 2 to 419 exact capped   418/418
(100 %)
0 diff
(100 %id)
DB225701 trachea .e 46 to 465 2 to 421 exact capped   420/420
(100 %)
0 diff
(100 %id)
BM768322 stomach .e 47 to 465 1 to 419 exact     419/419
(100 %)
0 diff
(100 %id)
AV715243   .e 53 to 464 1 to 412 exact AAA   412/412
(100 %)
0 diff
(100 %id)
BP384961 pancreatic islet .e 53 to 466 1 to 414 exact   Submitted on the opposite strand 414/414
(100 %)
0 diff
(100 %id)
EC473078 Prostate .e 54 to 152 1 to 99       99/99
(100 %)
0 diff
(100 %id)
EC514621 Prostate .e 54 to 156 1 to 102       102/102
(100 %)
6 diff
(94.2 %id)
CN431856 embryonic stem cells, DMSO-treated H9 cellline .e 55 to 467 1 to 413 exact     413/413
(100 %)
0 diff
(100 %id)
CN431903 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 55 to 457 1 to 403 exact AAA   403/403
(100 %)
0 diff
(100 %id)
CN431957 embryonic stem cells, DMSO-treated H9 cellline .e 55 to 461 1 to 407 exact     407/407
(100 %)
0 diff
(100 %id)
AV708161 adrenal gland .e 56 to 464 1 to 409 exact AAA   409/409
(100 %)
0 diff
(100 %id)
CN431835 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 56 to 467 1 to 412 exact     412/412
(100 %)
0 diff
(100 %id)
CN431855 embryonic stem cells, DMSO-treated H9 cellline .e 56 to 462 1 to 407 exact     407/407
(100 %)
0 diff
(100 %id)
CN431917 embryonic stem cells, DMSO-treated H9 cellline .e 56 to 463 1 to 408 exact     408/408
(100 %)
0 diff
(100 %id)
CN431927 embryonic stem cells, DMSO-treated H9 cellline .e 56 to 463 7 to 414 exact     408/414
(98 %)
0 diff
(100 %id)
EC478482 Prostate .e 56 to 153 1 to 98       98/98
(100 %)
0 diff
(100 %id)
EC500200 Prostate .e 56 to 152 1 to 97       97/97
(100 %)
0 diff
(100 %id)
BG118061 adenocarcinoma, cell line, Liver .e 56 to 464 1 to 409 exact AAA   409/409
(100 %)
0 diff
(100 %id)
BG292303 bladder, transitional cell papilloma, cell line .e 56 to 460 1 to 405 exact AAA   405/405
(100 %)
0 diff
(100 %id)
AV704853 adrenal gland .e 57 to 464 1 to 408 exact AAA   408/408
(100 %)
0 diff
(100 %id)
AV705562 adrenal gland .e 57 to 464 1 to 408 exact AAA   408/408
(100 %)
0 diff
(100 %id)
CN431837 embryonic stem cells, DMSO-treated H9 cellline .e 57 to 461 1 to 405 exact     405/405
(100 %)
0 diff
(100 %id)
CN431883 embryonic stem cells, DMSO-treated H9 cellline .e 57 to 464 1 to 408 exact     408/408
(100 %)
0 diff
(100 %id)
CN431972 embryonic stem cells, DMSO-treated H9 cellline .e 57 to 463 3 to 409 exact     407/409
(99 %)
6 diff
(98.6 %id)
EC509893 Prostate .e 57 to 156 1 to 100       100/100
(100 %)
0 diff
(100 %id)
EC524378 Prostate .e 57 to 156 1 to 100       100/100
(100 %)
0 diff
(100 %id)
EC538797 Prostate .e 57 to 156 1 to 100       100/100
(100 %)
0 diff
(100 %id)
EC539288 Prostate .e 57 to 156 1 to 100       100/100
(100 %)
0 diff
(100 %id)
AA308031 colon .e 58 to 452 4 to 398 exact     395/398
(99 %)
6 diff
(98.5 %id)
AV707633 adrenal gland .e 58 to 464 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
AV705754 adrenal gland .e 58 to 469 1 to 412 exact AAA   412/412
(100 %)
0 diff
(100 %id)
AF026844   .e 58 to 464 18 to 424 exact AAA   407/424
(95 %)
7 diff
(98.4 %id)
CN431857 embryonic stem cells, DMSO-treated H9 cellline .e 58 to 466 1 to 409 exact     409/409
(100 %)
0 diff
(100 %id)
CN431941 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 58 to 457 1 to 400 exact AAA   400/400
(100 %)
0 diff
(100 %id)
CN431959 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 58 to 464 1 to 407 exact     407/407
(100 %)
0 diff
(100 %id)
CN431964 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 58 to 467 1 to 410 exact     410/410
(100 %)
0 diff
(100 %id)
CN431970 embryonic stem cells, DMSO-treated H9 cellline .e 58 to 467 1 to 410 exact     410/410
(100 %)
0 diff
(100 %id)
EC484859 Prostate .e 58 to 155 1 to 98       98/98
(100 %)
0 diff
(100 %id)
EC487787 Prostate .e 58 to 155 1 to 98       98/98
(100 %)
0 diff
(100 %id)
EC559215 Prostate .e 58 to 156 1 to 99       99/99
(100 %)
0 diff
(100 %id)
EC565175 Prostate .e 58 to 156 1 to 99       99/99
(100 %)
0 diff
(100 %id)
EC582281 Prostate .e 58 to 156 1 to 99       99/99
(100 %)
0 diff
(100 %id)
AV694684 hepatocellular carcinoma .e 58 to 464 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
CD678408 eye, Trabecular meshwork .e 58 to 464 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
AW772765 normal epithelium, thyroid .e 58 to 467 5 to 414 exact   Submitted on the opposite strand 410/414
(99 %)
6 diff
(98.6 %id)
BG027590 Bone, osteosarcoma, cell line .e 58 to 469 1 to 412 exact AAA   412/412
(100 %)
0 diff
(100 %id)
BG740822 skin .e 58 to 469 1 to 412 exact AAA   412/412
(100 %)
0 diff
(100 %id)
BI766945 pooled lung and spleen .e 58 to 464 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
BM552625 leiomyosarcoma, uterus .e 58 to 469 1 to 412 exact AAA   412/412
(100 %)
0 diff
(100 %id)
CD512839 brain, Pituitary .e 58 to 465 1 to 408 exact     408/409
(99 %)
1 diff
(99.8 %id)
CR987598 T-Lymphocytes .e 58 to 464 1 to 407 exact AAA   407/407
(100 %)
0 diff
(100 %id)
EC448081 Prostate .e 59 to 159 1 to 101       101/101
(100 %)
0 diff
(100 %id)
EC565800 Prostate .e 59 to 159 1 to 101       101/101
(100 %)
0 diff
(100 %id)
BG112951 Bone, osteosarcoma, cell line .e 59 to 464 1 to 406 exact AAA   406/406
(100 %)
0 diff
(100 %id)
BI821735 pooled brain, lung, testis .e 59 to 469 1 to 411 exact AAA   411/411
(100 %)
0 diff
(100 %id)
BI916634 brain .e 59 to 469 1 to 411 exact AAA   411/411
(100 %)
0 diff
(100 %id)
BQ049078 lymph, lymphoma, cell line .e 59 to 469 1 to 411 exact     411/411
(100 %)
0 diff
(100 %id)
BC062462 Uterus, leiomyosarcoma .e 59 to 460 1 to 402 exact available from MGC, AAA   402/402
(100 %)
0 diff
(100 %id)
CB143861 Liver .e 59 to 442 1 to 384 exact     384/384
(100 %)
0 diff
(100 %id)
AV704483 adrenal gland .e 60 to 464 1 to 405 exact AAA   405/405
(100 %)
0 diff
(100 %id)
EC455407 Prostate .e 60 to 159 1 to 99       99/99
(100 %)
6 diff
(94.0 %id)
EC467826 Prostate .e 60 to 159 1 to 99       99/99
(100 %)
6 diff
(94.0 %id)
EC481355 Prostate .e 60 to 159 1 to 99       99/99
(100 %)
6 diff
(94.0 %id)
BG112043 Bone, osteosarcoma, cell line .e 60 to 469 1 to 410 exact AAA   410/410
(100 %)
0 diff
(100 %id)
BF983892 duodenal adenocarcinoma, cell line, small intestine .e 60 to 464 1 to 405 exact AAA   405/405
(100 %)
0 diff
(100 %id)
BM913323 amelanotic melanoma, cell line, skin .e 60 to 471 1 to 412 exact AAA   412/412
(100 %)
0 diff
(100 %id)
CN431882 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 61 to 467 1 to 407 exact     407/407
(100 %)
0 diff
(100 %id)
CN431908 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 61 to 452 1 to 392 exact     392/392
(100 %)
0 diff
(100 %id)
CN431947 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 61 to 467 1 to 407 exact     407/407
(100 %)
0 diff
(100 %id)
EL952060 eyeball .e 61 to 469 4 to 412 exact AAA   409/412
(99 %)
0 diff
(100 %id)
AV724120 hypothalamus .e 61 to 464 1 to 404 exact     404/404
(100 %)
0 diff
(100 %id)
AV728974 hypothalamus .e 61 to 464 1 to 404 exact AAA   404/404
(100 %)
0 diff
(100 %id)
BG108263 Bone, osteosarcoma, cell line .e 61 to 464 1 to 404 exact AAA   404/404
(100 %)
0 diff
(100 %id)
BI832584 pooled pancreas and spleen .e 61 to 469 1 to 409 exact AAA   409/409
(100 %)
0 diff
(100 %id)
BI834667 pooled pancreas and spleen .e 61 to 469 1 to 409 exact AAA   409/409
(100 %)
0 diff
(100 %id)
BI862369 breast, mammary adenocarcinoma, cell line .e 61 to 469 1 to 409 exact AAA   409/409
(100 %)
0 diff
(100 %id)
CT005058 T-Lymphocytes .e 61 to 458 1 to 398 exact     398/398
(100 %)
0 diff
(100 %id)
AA316588 colon .e 62 to 464 1 to 403 exact     403/403
(100 %)
0 diff
(100 %id)
AA316781 colon .e 62 to 464 1 to 403 exact     403/403
(100 %)
0 diff
(100 %id)
AV649625 corresponding non cancerous liver tissue .e 62 to 464 1 to 403 exact AAA Submitted on the opposite strand 403/403
(100 %)
0 diff
(100 %id)
BP421734 small intestine .e 62 to 466 7 to 411 exact   Submitted on the opposite strand 405/411
(98 %)
0 diff
(100 %id)
BI771922 pooled lung and spleen .e 62 to 464 1 to 403 exact AAA   403/403
(100 %)
0 diff
(100 %id)
BI860792 breast, mammary adenocarcinoma, cell line .e 62 to 469 1 to 408 exact AAA   408/408
(100 %)
0 diff
(100 %id)
BM772938 Ascites, stomach .e 62 to 468 1 to 407 exact     407/407
(100 %)
0 diff
(100 %id)
EL947773 eyeball .e 63 to 464 5 to 406 exact AAA   402/406
(99 %)
0 diff
(100 %id)
EC462016.
matches multiple genes
Prostate .e 64 to 167 1 to 104 exact   also hits gene RPL41P1 104/104
(100 %)
0 diff
(100 %id)
EC465491.
matches multiple genes
Prostate .e 64 to 167 1 to 104 exact   also hits gene RPL41P1 104/104
(100 %)
0 diff
(100 %id)
EC466112.
matches multiple genes
Prostate .e 64 to 167 1 to 104 exact   also hits gene RPL41P1 104/104
(100 %)
0 diff
(100 %id)
EC489424.
matches multiple genes
Prostate .e 64 to 167 1 to 104 exact   also hits gene RPL41P1 104/104
(100 %)
0 diff
(100 %id)
EC492185.
matches multiple genes
Prostate .e 64 to 167 1 to 104 exact   also hits gene RPL41P1 104/104
(100 %)
0 diff
(100 %id)
EC501627 Prostate .e 64 to 166 1 to 103 exact     103/103
(100 %)
0 diff
(100 %id)
EC563345.
matches multiple genes
Prostate .e 64 to 167 1 to 104 exact   also hits gene RPL41P1 104/104
(100 %)
0 diff
(100 %id)
EC568485.
matches multiple genes
Prostate .e 64 to 167 1 to 104 exact   also hits gene RPL41P1 104/104
(100 %)
0 diff
(100 %id)
CD676272 eye, lens .e 64 to 463 1 to 400 exact     400/400
(100 %)
0 diff
(100 %id)
AA304725.
matches multiple genes
aorta .e 65 to 245 1 to 181 R17X   also hits gene fortey, RPL41P1 181/181
(100 %)
0 diff
(100 %id)
EC440629 Prostate .e 65 to 166 1 to 102 exact     102/102
(100 %)
0 diff
(100 %id)
EC458953.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
EC461235.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
EC467768.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
EC490500.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
EC495493.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
EC548521.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
EC577812.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
EC583905.
matches multiple genes
Prostate .e 65 to 167 1 to 103 exact   also hits gene RPL41P1 103/103
(100 %)
0 diff
(100 %id)
AA758254 pineal gland .e 65 to 464 400 to 1 exact     400/400
(100 %)
0 diff
(100 %id)
BF030192.
matches multiple genes
hypernephroma, Kidney .e 65 to 328 1 to 264 exact   also hits gene fortey, RPL41P1 264/264
(100 %)
0 diff
(100 %id)
BF132761.
matches multiple genes
lung, mucoepidermoid carcinoma .e 65 to 328 1 to 264 exact   also hits gene fortey, RPL41P1 264/264
(100 %)
0 diff
(100 %id)
CN431847 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 66 to 457 1 to 392 exact AAA   392/392
(100 %)
0 diff
(100 %id)
EC448199.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
EC448470.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
EC457915 Prostate .e 66 to 166 1 to 101 exact     101/101
(100 %)
0 diff
(100 %id)
EC463047.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
EC480126.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
EC491257.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
EC534342.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
EC540982.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
EC549297.
matches multiple genes
Prostate .e 66 to 167 1 to 102 exact   also hits gene RPL41P1 102/102
(100 %)
0 diff
(100 %id)
CN431841 embryonic stem cells, DMSO-treated H9 cellline .e 67 to 467 1 to 401 exact     401/401
(100 %)
0 diff
(100 %id)
CN431906 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 67 to 457 1 to 391 exact AAA   391/391
(100 %)
0 diff
(100 %id)
EC521804.
matches multiple genes
Prostate .e 67 to 167 1 to 101 exact   also hits gene RPL41P1 101/101
(100 %)
0 diff
(100 %id)
EC580798.
matches multiple genes
Prostate .e 67 to 167 1 to 101 exact   also hits gene RPL41P1 101/101
(100 %)
0 diff
(100 %id)
CD108103 brain, Pituitary .e 67 to 464 1 to 398 exact     398/399
(99 %)
1 diff
(99.8 %id)
BM832914 stomach .e 67 to 463 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
CN431866 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 68 to 467 1 to 400 exact     400/400
(100 %)
0 diff
(100 %id)
CN431950 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 68 to 467 1 to 400 exact     400/400
(100 %)
0 diff
(100 %id)
CN431956 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 68 to 467 1 to 400 exact     400/400
(100 %)
0 diff
(100 %id)
BE788077 large cell carcinoma, lung .e 68 to 456 1 to 389 exact     389/389
(100 %)
0 diff
(100 %id)
CN431922 embryonic stem cells, DMSO-treated H9 cellline .e 69 to 467 1 to 399 exact     399/399
(100 %)
0 diff
(100 %id)
BP384913 pancreatic islet .e 69 to 463 1 to 395 exact   Submitted on the opposite strand 395/395
(100 %)
0 diff
(100 %id)
BM702897 eye, Retina Foveal and Macular .e 69 to 457 1 to 389 exact     389/389
(100 %)
0 diff
(100 %id)
AA316925 colon .e 70 to 464 1 to 395 exact     395/395
(100 %)
0 diff
(100 %id)
CN431898 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 70 to 466 8 to 404 exact     397/397
(100 %)
0 diff
(100 %id)
CN431905 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 70 to 465 8 to 403 exact     396/396
(100 %)
0 diff
(100 %id)
BP391775 pancreatic islet .e 70 to 464 8 to 402 exact   Submitted on the opposite strand 395/395
(100 %)
0 diff
(100 %id)
BP417687 small intestine .e 70 to 468 8 to 406 K14X   Submitted on the opposite strand 399/399
(100 %)
0 diff
(100 %id)
BP422163 small intestine .e 70 to 470 8 to 408 exact   Submitted on the opposite strand 401/401
(100 %)
0 diff
(100 %id)
BP392476 pancreatic islet .e 70 to 469 1 to 400 exact   Submitted on the opposite strand 400/400
(100 %)
0 diff
(100 %id)
BI768078 pooled lung and spleen .e 70 to 460 8 to 398 exact AAA   391/391
(100 %)
0 diff
(100 %id)
BI834067 pooled pancreas and spleen .e 70 to 464 8 to 402 exact AAA   395/395
(100 %)
0 diff
(100 %id)
BU579946 insulinoma, Pancreas .e 70 to 469 429 to 30 exact AAA Submitted on the opposite strand 400/400
(100 %)
0 diff
(100 %id)
BM842171 lymph node, stomach .e 70 to 463 1 to 394 exact     394/394
(100 %)
0 diff
(100 %id)
BM781864 myeloma .e 70 to 468 8 to 406 exact     399/399
(100 %)
0 diff
(100 %id)
EC456338.
matches multiple genes
Prostate .e 71 to 167 1 to 97 exact   also hits gene RPL41P1 97/97
(100 %)
0 diff
(100 %id)
EC559840 Prostate .e 71 to 166 1 to 96 exact     96/96
(100 %)
0 diff
(100 %id)
EC520377 Prostate .e 72 to 167 1 to 96 exact     96/96
(100 %)
0 diff
(100 %id)
EC485787.
matches multiple genes
Prostate .e 75 to 170 1 to 96 exact   also hits gene fortey, RPL41P1, RPL41P2 96/96
(100 %)
0 diff
(100 %id)
EC471198.
matches multiple genes
Prostate .e 80 to 177 1 to 98 exact   also hits gene fortey, plawzeeby, RPL41P1, RPL41P2 98/98
(100 %)
0 diff
(100 %id)
EC528797.
matches multiple genes
Prostate .e 82 to 178 1 to 97 exact   also hits gene fortey, plawzeeby, RPL41P1, RPL41P2, RPL41P5, skaror 97/97
(100 %)
0 diff
(100 %id)
EL950780 eyeball .e 109 to 464 5 to 360   AAA   356/360
(98 %)
0 diff
(100 %id)
AA729683 pooled germ cell tumors .e 115 to 457 343 to 1       343/343
(100 %)
0 diff
(100 %id)
AI523232 aorta .e 115 to 464 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AI709212 aorta .e 115 to 464 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AA174010.
matches multiple genes
  .e 123 to 460 1 to 338     also hits gene plawzeeby 338/338
(100 %)
0 diff
(100 %id)
AA147321.
matches multiple genes
  .e 157 to 439 283 to 1     Possibly primed on the genome, locally A rich (19/20 A in genome downstream of last aligned base), also hits gene fortey, plawzeeby, RPL41P5, skaror 283/283
(100 %)
0 diff
(100 %id)
BJ996890 hepatoblastoma .e 164 to 469 1 to 306       306/306
(100 %)
0 diff
(100 %id)
T50757 fetal spleen, Spleen .e 198 to 438 241 to 1       241/241
(100 %)
0 diff
(100 %id)
AI718254 aorta .e 199 to 460 262 to 1       262/262
(100 %)
0 diff
(100 %id)
NM_001035267.1   .f 1 to 583 1 to 583 exact RefSeq, AAA   583/583
(100 %)
0 diff
(100 %id)
TI_154025452   .f 34 to 542 109 to 618 exact   Submitted on the opposite strand 510/897
(56 %)
14 diff
(98.5 %id)
CD638593 pooled .f 37 to 583 1 to 546 exact tiling clone, AAA   546/546
(100 %)
3 diff
(99.5 %id)
CK003344 brain/CNS, Human Brain - Cerebellar Cortex .f 39 to 580 1 to 542 exact     542/628
(86 %)
5 diff
(99.3 %id)
BQ277211 mixed (pool of 40 RNAs) .f 40 to 578 1 to 539 exact     539/960
(56 %)
4 diff
(99.6 %id)
BU598328 mixed (pool of 40 RNAs) .f 40 to 576 1 to 537 exact     537/541
(99 %)
4 diff
(99.3 %id)
BU601449 mixed (pool of 40 RNAs) .f 40 to 576 1 to 539 exact     539/543
(99 %)
8 diff
(98.6 %id)
BU540254 mixed (pool of 40 RNAs) .f 40 to 583 1 to 545 exact     545/583
(93 %)
5 diff
(99.2 %id)
BU933338 mixed (pool of 40 RNAs) .f 40 to 578 1 to 540 exact     540/831
(64 %)
5 diff
(99.4 %id)
BU959838 mixed (pool of 40 RNAs) .f 40 to 582 1 to 543 exact     543/859
(63 %)
7 diff
(99.2 %id)
BU596906 mixed (pool of 40 RNAs) .f 41 to 558 1 to 525 exact     525/856
(61 %)
19 diff
(97.8 %id)
BU953493 mixed (pool of 40 RNAs) .f 41 to 569 1 to 530 exact     530/802
(66 %)
7 diff
(99.2 %id)
BG941017 blood .f 42 to 307 1 to 267 exact     267/267
(100 %)
2 diff
(99.3 %id)
CD175394 embryonic stem cells, WA01, passage 38 .f 44 to 578 18 to 551 exact tiling clone, AAA   534/551
(96 %)
6 diff
(99.0 %id)
BF213128 bone marrow, from acute myelogenous leukemia .f 44 to 462 1 to 416 exact     416/416
(100 %)
5 diff
(98.8 %id)
AV758908 bone marrow .f 44 to 435 1 to 383 K16E R17E K19*     387/384
(100 %)
6 diff
(98.5 %id)
BG501019 adenocarcinoma, Prostate .f 45 to 462 1 to 418 exact available from MGC,   418/418
(100 %)
2 diff
(99.6 %id)
DA604697   .f 45 to 553 2 to 510 exact capped   509/509
(100 %)
0 diff
(100 %id)
BC017820 Prostate, adenocarcinoma. .f 46 to 583 1 to 538 exact available from MGC, AAA   538/538
(100 %)
2 diff
(99.7 %id)
CB987258 Pooled-Glandular .f 46 to 578 1 to 533 exact     533/534
(99 %)
4 diff
(99.3 %id)
AU099837   .f 50 to 350 1 to 300 exact     300/300
(100 %)
8 diff
(97.4 %id)
BM552663 leiomyosarcoma, uterus .f 56 to 578 6 to 528 exact     523/528
(99 %)
1 diff
(99.9 %id)
H50173 brain .f 57 to 385 1 to 342 R11A fully sequenced,   342/342
(100 %)
3 diff
(99.2 %id)
N46129 melanocyte .f 57 to 227 1 to 171   fully sequenced,   171/171
(100 %)
0 diff
(100 %id)
BY795063 eye .f 58 to 515 1 to 458 exact     458/458
(100 %)
0 diff
(100 %id)
H23852 brain .f 58 to 314 1 to 257 R11P     257/257
(100 %)
4 diff
(98.5 %id)
BG030834 breast, mammary adenocarcinoma, cell line .f 59 to 571 15 to 527 exact AAA   513/527
(97 %)
6 diff
(98.9 %id)
TI_57237858   .f 59 to 578 23 to 541 exact AAA   519/541
(95 %)
6 diff
(98.9 %id)
W61062 senescent fibroblast .f 60 to 575 1 to 515 R11X R12G L13*     515/515
(100 %)
3 diff
(99.5 %id)
BG398130 B-cells, primary B-cells from tonsils (cell line) .f 60 to 578 1 to 519 exact available from MGC, AAA   519/519
(100 %)
1 diff
(99.9 %id)
AA302042 aorta .f 61 to 328 1 to 268 R11X R17K     268/268
(100 %)
2 diff
(99.3 %id)
D51347   .f 61 to 497 1 to 436 W5X M10X     436/436
(100 %)
8 diff
(98.2 %id)
D78930 placenta .f 61 to 508 1 to 448 exact     448/448
(100 %)
2 diff
(99.6 %id)
W38734.
matches multiple genes
parathyroid gland, parathyroid tumor .f 61 to 223 8 to 170     also hits gene skaror 163/170
(95 %)
6 diff
(96.5 %id)
BC082759 Primary B-Cells from Tonsils .f 61 to 578 1 to 518 exact available from MGC, AAA   518/518
(100 %)
0 diff
(100 %id)
CA418612 Chondrosarcoma Grade II, Left Pelvis .f 61 to 578 536 to 19 exact AAA   518/527
(98 %)
0 diff
(100 %id)
EL951780 eyeball .f 63 to 573 28 to 541 exact     514/541
(95 %)
14 diff
(97.5 %id)
D55495   .f 64 to 393 1 to 330 exact     330/330
(100 %)
1 diff
(99.7 %id)
D55510   .f 64 to 494 1 to 429 exact     429/430
(99 %)
3 diff
(99.4 %id)
BF131676 hypernephroma, Kidney .f 64 to 571 1 to 510 exact     510/741
(68 %)
11 diff
(98.6 %id)
BF433437 carcinoid, lung .f 66 to 522 1 to 457 exact   Submitted on the opposite strand 457/472
(96 %)
15 diff
(96.9 %id)
BI909732 leukocyte .f 66 to 578 1 to 512 exact AAA   512/512
(100 %)
1 diff
(99.9 %id)
BU571092 brain, glioblastoma .f 66 to 575 1 to 511 exact     511/514
(99 %)
6 diff
(98.9 %id)
BU934783 mixed (pool of 40 RNAs) .f 66 to 578 1 to 517 exact     517/959
(53 %)
9 diff
(99.1 %id)
CB963595 Blood vessels - aorta, basilar and artery .f 66 to 576 1 to 511 exact     511/516
(99 %)
4 diff
(99.3 %id)
BF940359 fibrotheoma, ovary .f 67 to 498 1 to 432 R9X   Submitted on the opposite strand 432/432
(100 %)
4 diff
(99.1 %id)
AV739056 cord Blood .f 69 to 578 47 to 541 exact AAA   495/541
(91 %)
31 diff
(94.3 %id)
H45241 brain .f 69 to 357 1 to 290 R11A     290/290
(100 %)
4 diff
(98.7 %id)
BQ959958 leiomyosarcoma, uterus .f 69 to 578 8 to 517 exact AAA   510/514
(99 %)
1 diff
(99.9 %id)
TI_151797155   .f 69 to 579 113 to 623 exact     511/515
(99 %)
4 diff
(99.3 %id)
BU602479 mixed (pool of 40 RNAs) .f 70 to 578 1 to 509 exact     509/509
(100 %)
4 diff
(99.3 %id)
BU536125 mixed (pool of 40 RNAs) .f 70 to 234 1 to 165       165/209
(78 %)
2 diff
(99.1 %id)
BU537814 mixed (pool of 40 RNAs) .f 70 to 580 1 to 512 exact     512/517
(99 %)
3 diff
(99.5 %id)
CD387065 embryonic trophoblasts, made from WA01 stemcells .f 73 to 583 19 to 529 exact AAA   511/529
(96 %)
7 diff
(98.7 %id)
AV717393   .f 74 to 583 1 to 510 exact AAA   510/510
(100 %)
0 diff
(100 %id)
CD678074 eye, Trabecular meshwork .f 75 to 577 1 to 503 exact fully sequenced,   503/503
(100 %)
0 diff
(100 %id)
H00512 placenta .f 75 to 353 1 to 294 R11A R15A K16Q R17K R18K ... fully sequenced,   294/294
(100 %)
10 diff
(96.6 %id)
BQ220281 melanotic melanoma, skin .f 75 to 578 1 to 504 exact AAA   504/504
(100 %)
0 diff
(100 %id)
DN994374 brain, whole brain .f 75 to 564 8 to 497 exact     490/497
(98 %)
8 diff
(98.4 %id)
EL946875 eyeball .f 76 to 563 1 to 488 exact     488/488
(100 %)
8 diff
(98.4 %id)
BG285038 adenocarcinoma, cell line, Prostate .f 76 to 583 1 to 508 exact AAA   508/508
(100 %)
4 diff
(99.3 %id)
AA329934   .f 77 to 383 1 to 310 R12Q L13A K14E R15A K16Q ...     310/336
(92 %)
6 diff
(98.3 %id)
AA365574 pineal body .f 77 to 323 1 to 247 exact     247/247
(100 %)
1 diff
(99.6 %id)
CD678166 eye, Trabecular meshwork .f 77 to 578 1 to 502 R2I AAA   502/502
(100 %)
1 diff
(99.9 %id)
BM905214 melanotic melanoma, skin .f 77 to 579 1 to 503 exact     503/536
(93 %)
1 diff
(99.9 %id)
CD175203 embryonic stem cells, WA01, passage 38 .f 78 to 578 22 to 522 exact AAA   501/522
(95 %)
6 diff
(98.9 %id)
DR978601 brain .f 78 to 197 122 to 4       119/126
(94 %)
0 diff
(100 %id)
BE785078 large cell carcinoma, lung .f 78 to 584 1 to 507 exact     507/747
(67 %)
6 diff
(99.2 %id)
BF343594 brain, glioblastoma with EGFR amplification .f 79 to 578 1 to 499 exact AAA   499/499
(100 %)
1 diff
(99.8 %id)
TI_57164056   .f 79 to 578 35 to 534 exact AAA   500/534
(93 %)
6 diff
(98.9 %id)
AA352057   .f 80 to 339 11 to 270 R11X     260/270
(96 %)
5 diff
(98.2 %id)
BI837025 pooled pancreas and spleen .f 80 to 578 1 to 499 exact AAA   499/499
(100 %)
1 diff
(99.8 %id)
BE883673 leiomyosarcoma, uterus .f 81 to 584 1 to 504 exact     504/552
(91 %)
2 diff
(99.7 %id)
BE875911 large cell carcinoma, undifferentiated, lung .f 82 to 583 1 to 501 exact AAA   501/501
(100 %)
1 diff
(99.9 %id)
W81683 heart .f 84 to 552 1 to 473 M10X R11X R12X K14E R15A ...   Submitted on the opposite strand 473/473
(100 %)
5 diff
(99.0 %id)
BE794073 lung, small cell carcinoma .f 84 to 581 1 to 499 exact     499/503
(99 %)
3 diff
(99.5 %id)
CB107642 Liver .f 84 to 515 10 to 441 exact     432/432
(100 %)
1 diff
(99.8 %id)
BE791329 lung, small cell carcinoma .f 86 to 581 1 to 495 exact     495/496
(99 %)
2 diff
(99.6 %id)
CN431834 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 87 to 524 1 to 438 exact     438/438
(100 %)
3 diff
(99.4 %id)
R82774 placenta .f 88 to 522 1 to 443 K7X R11A R15A K16Q R17K ...     443/448
(98 %)
19 diff
(95.8 %id)
BU567113 mixed (pool of 40 RNAs) .f 88 to 579 1 to 492 exact     492/492
(100 %)
4 diff
(99.2 %id)
BC066328 Brain, hypothalamus .f 89 to 570 1 to 482 exact available from MGC, AAA   482/482
(100 %)
1 diff
(99.8 %id)
BG716424 brain, hypothalamus .f 89 to 570 7 to 488 exact available from MGC, AAA   482/488
(98 %)
6 diff
(98.8 %id)
BU532008 mixed (pool of 40 RNAs) .f 90 to 585 1 to 497 exact     497/525
(94 %)
8 diff
(98.5 %id)
AA069564 pineal gland .f 91 to 557 1 to 472 M10X R11X fully sequenced,   472/472
(100 %)
12 diff
(97.5 %id)
BF668068 brain, primitive neuroectoderm .f 92 to 462 1 to 371 exact     371/371
(100 %)
4 diff
(99.0 %id)
BG538754 lung .f 92 to 462 1 to 371 exact     371/371
(100 %)
1 diff
(99.8 %id)
EL951563 eyeball .f 94 to 583 25 to 514 exact AAA   490/514
(95 %)
6 diff
(98.9 %id)
W81682 heart .f 95 to 584 493 to 3 L13X   Submitted on the opposite strand 491/493
(99 %)
0 diff
(100 %id)
AJ573507 pectoral muscle (after mastectomy) .f 97 to 545 1 to 448 R11L     448/448
(100 %)
5 diff
(98.9 %id)
BE783726 eye, retinoblastoma .f 98 to 578 1 to 481 exact AAA   481/481
(100 %)
0 diff
(100 %id)
BG500417 adenocarcinoma, Prostate .f 105 to 584 1 to 490 exact     490/997
(49 %)
20 diff
(98.0 %id)
CB409418 maxilla, pooled .f 105 to 577 1 to 473 exact     473/473
(100 %)
1 diff
(99.8 %id)
CD173153 embryonic stem cells, WA01, passage 38 .f 106 to 578 27 to 499 M10L AAA   473/499
(94 %)
10 diff
(98.0 %id)
BU954592 mixed (pool of 40 RNAs) .f 107 to 578 1 to 472 exact     472/476
(99 %)
5 diff
(99.0 %id)
D52646   .f 108 to 499 1 to 395 K19X R21S Q22A R23E S24X ...     395/395
(100 %)
7 diff
(98.3 %id)
D53185   .f 108 to 430 1 to 324 K14X R15A K16Q R17K R18K ...     324/329
(98 %)
4 diff
(98.8 %id)
BE565426 bladder, carcinoma, cell line .f 110 to 442 1 to 333 exact     333/333
(100 %)
0 diff
(100 %id)
AA310863   .f 113 to 432 27 to 347 exact     321/347
(92 %)
7 diff
(98.0 %id)
H19904 brain .f 113 to 268 1 to 157   fully sequenced,   155/155
(100 %)
0 diff
(100 %id)
BF216493 brain, glioblastoma .f 114 to 462 1 to 351 exact     351/351
(100 %)
6 diff
(98.3 %id)
CD558151 testis .f 114 to 578 33 to 497 exact AAA   465/497
(93 %)
8 diff
(98.4 %id)
BP430626   .f 118 to 458 1 to 341 exact     341/341
(100 %)
1 diff
(99.8 %id)
BU960787 mixed (pool of 40 RNAs) .f 119 to 581 1 to 463 exact     463/465
(99 %)
3 diff
(99.4 %id)
AA738187 pooled germ cell tumors .f 120 to 412 293 to 1 exact     293/293
(100 %)
0 diff
(100 %id)
BE769972 prostate_tumor .f 121 to 424 322 to 19 exact     304/322
(94 %)
2 diff
(99.4 %id)
BE836076 prostate_normal .f 121 to 424 314 to 12 exact     303/314
(96 %)
4 diff
(98.8 %id)
CF123581 CNCAP(3)T-225 cell line, Prostate .f 121 to 577 38 to 494 exact     457/494
(92 %)
6 diff
(98.8 %id)
CN431974 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 125 to 581 1 to 457 exact     457/457
(100 %)
0 diff
(100 %id)
BU564942 mixed (pool of 40 RNAs) .f 131 to 577 1 to 448 exact     448/880
(50 %)
4 diff
(99.6 %id)
AA719697 pineal gland .f 133 to 564 438 to 7 K8N     432/438
(98 %)
1 diff
(99.8 %id)
AI061388 Prostate .f 133 to 584 454 to 3 exact     452/454
(99 %)
0 diff
(100 %id)
CK004433 brain/CNS, Human Brain - Frontal Cortex .f 141 to 583 1 to 443 exact     443/445
(99 %)
3 diff
(99.4 %id)
AJ710013 heart .f 148 to 566 1 to 419 exact     419/419
(100 %)
3 diff
(99.3 %id)
BM739639 stomach .f 154 to 583 1 to 430 exact AAA   430/430
(100 %)
2 diff
(99.6 %id)
AI199911 lung .f 160 to 581 428 to 7 exact     422/428
(98 %)
0 diff
(100 %id)
AA973973 carcinoid, lung .f 166 to 581 416 to 1 exact     416/416
(100 %)
0 diff
(100 %id)
N36859 melanocyte .f 179 to 583 408 to 1 R2E A3S K4Q W5S R6G ... fully sequenced,   406/406
(100 %)
2 diff
(99.6 %id)
CN431921 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 185 to 582 1 to 398 exact     398/398
(100 %)
0 diff
(100 %id)
CN431952 embryonic stem cells, DMSO-treated H9 cellline .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
CR599786 B cells (Ramos cell line) Cot 25-normalized .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
CR605341 Placenta Cot 25-normalized .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
CR609127 fetal brain .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
BX347737 Neuroblastoma Cot 25-normalized .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
BX347738 Neuroblastoma Cot 25-normalized .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
BX439565.
matches multiple genes
placenta .f 185 to 581 1 to 397 exact   Submitted on the opposite strand, also hits gene LOC400590 397/397
(100 %)
0 diff
(100 %id)
AL537421 brain, fetal brain .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
BX383287.
matches multiple genes
  .f 185 to 584 1 to 400 exact   also hits gene KBTBD2 400/400
(100 %)
0 diff
(100 %id)
BX383318   .f 185 to 584 1 to 400 exact     400/400
(100 %)
0 diff
(100 %id)
BX363575   .f 185 to 581 1 to 397 exact     397/397
(100 %)
0 diff
(100 %id)
AW949682   .f 186 to 578 1 to 393 exact AAA   393/393
(100 %)
0 diff
(100 %id)
CN431870 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 188 to 581 1 to 394 exact     394/394
(100 %)
0 diff
(100 %id)
CN431850 embryonic stem cells, DMSO-treated H9 cellline .f 189 to 582 1 to 394 exact     394/394
(100 %)
0 diff
(100 %id)
CN431894 embryonic stem cells, DMSO-treated H9 cellline .f 189 to 570 1 to 382 exact     382/382
(100 %)
0 diff
(100 %id)
BE910632 epithelioid carcinoma, Pancreas .f 189 to 571 1 to 383 exact AAA   383/383
(100 %)
0 diff
(100 %id)
AA531522 invasive prostate tumor, Prostate .f 190 to 578 417 to 29 exact AAA   389/389
(100 %)
0 diff
(100 %id)
F21077 pectoral muscle (after mastectomy) .f 191 to 584 1 to 394 exact     394/394
(100 %)
0 diff
(100 %id)
CN431958 embryonic stem cells, DMSO-treated H9 cellline .f 191 to 579 1 to 389 exact     389/389
(100 %)
0 diff
(100 %id)
AA469227   .f 191 to 578 388 to 1 exact     388/388
(100 %)
0 diff
(100 %id)
AA643128 lymph node, lymphoma .f 191 to 582 392 to 1 exact     392/392
(100 %)
0 diff
(100 %id)
BU154313 eye, retinoblastoma .f 191 to 580 1 to 390 exact     390/393
(99 %)
1 diff
(99.8 %id)
BE880754 large cell carcinoma, undifferentiated, lung .f 192 to 573 1 to 382 exact     382/382
(100 %)
0 diff
(100 %id)
BE885478 leiomyosarcoma, uterus .f 192 to 573 1 to 382 exact     382/382
(100 %)
0 diff
(100 %id)
BC070483 Uterus, leiomyosarcoma .f 192 to 564 1 to 373 exact available from MGC, AAA   373/373
(100 %)
0 diff
(100 %id)
ES308846 occipital hair of pubic hypotrichosispatient, skin .f 193 to 578 417 to 31 R2K R9A M10N R11A R12Q ... AAA Submitted on the opposite strand 387/387
(100 %)
5 diff
(98.8 %id)
AA600141 lung, lung carcinoma .f 193 to 578 386 to 1 exact     386/386
(100 %)
0 diff
(100 %id)
AA837036 lung, small cell carcinoma .f 193 to 579 387 to 1 exact     387/387
(100 %)
0 diff
(100 %id)
AI219069 placenta .f 193 to 580 388 to 1 exact     388/388
(100 %)
0 diff
(100 %id)
AI266321 lung .f 193 to 578 386 to 1 exact     386/386
(100 %)
0 diff
(100 %id)
AI654296 ovary, tumor, 5 pooled (see description) .f 193 to 583 391 to 1 exact     391/391
(100 %)
0 diff
(100 %id)
BF197830 skin, normal, 4 pooled samples .f 193 to 579 387 to 1 exact     387/387
(100 %)
0 diff
(100 %id)
CN431853 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 194 to 581 1 to 388 exact     388/388
(100 %)
0 diff
(100 %id)
CN431962 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 194 to 581 1 to 388 exact     388/388
(100 %)
0 diff
(100 %id)
F22567 pectoral muscle (after mastectomy) .f 195 to 584 7 to 396 M20X K25X     390/396
(98 %)
0 diff
(100 %id)
BE538890 cervix .f 195 to 579 1 to 385 exact     385/385
(100 %)
0 diff
(100 %id)
BF026437 melanotic melanoma, skin .f 195 to 578 1 to 384 exact AAA   384/384
(100 %)
0 diff
(100 %id)
BE792990 lung, small cell carcinoma .f 196 to 579 1 to 384 exact     384/384
(100 %)
0 diff
(100 %id)
BE792287 lung, small cell carcinoma .f 196 to 578 1 to 383 exact     383/383
(100 %)
0 diff
(100 %id)
BE797328 lung, small cell carcinoma .f 196 to 578 1 to 383 exact     383/383
(100 %)
0 diff
(100 %id)
CN431914 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 198 to 581 1 to 384 exact     384/384
(100 %)
0 diff
(100 %id)
CN431973 embryonic stem cells, DMSO-treated H9 cellline .f 200 to 583 1 to 384       384/384
(100 %)
0 diff
(100 %id)
AI912366 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .f 201 to 584 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AA148108   .f 202 to 583 382 to 1       382/382
(100 %)
0 diff
(100 %id)
AA081299   .f 204 to 584 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AW798785 uterus .f 207 to 593 388 to 3       386/388
(99 %)
0 diff
(100 %id)
AA650121   .f 208 to 584 378 to 2       377/378
(99 %)
0 diff
(100 %id)
BF222286 Prostate .f 209 to 578 370 to 1       370/370
(100 %)
0 diff
(100 %id)
H20297 brain .f 238 to 578 346 to 1   fully sequenced,   346/346
(100 %)
7 diff
(98.0 %id)
CD678073 eye, Trabecular meshwork .f 244 to 578 365 to 31   fully sequenced, AAA   335/335
(100 %)
1 diff
(99.8 %id)
AA069572 pineal gland .f 308 to 574 275 to 1   fully sequenced,   275/275
(100 %)
10 diff
(96.4 %id)
H00463 placenta .f 323 to 572 258 to 7   fully sequenced,   252/258
(97 %)
2 diff
(99.3 %id)
H50125 brain .f 355 to 585 251 to 14   fully sequenced, AAA   238/238
(100 %)
1 diff
(99.6 %id)
DW457734 Liver .g 1 to 139 21 to 159       147/160
(91 %)
9 diff
(94.4 %id)
AV743121 cord Blood .g 1 to 397 53 to 439 S14M G15E G16E R17E S18A ...     392/440
(89 %)
14 diff
(96.9 %id)
BU590421 mixed (pool of 40 RNAs) .g 1 to 484 5 to 487 exact     487/527
(92 %)
5 diff
(99.1 %id)
BU535112 mixed (pool of 40 RNAs) .g 1 to 483 5 to 487 exact     487/829
(58 %)
5 diff
(99.4 %id)
BU537091 mixed (pool of 40 RNAs) .g 1 to 477 5 to 481 exact     481/485
(99 %)
4 diff
(99.2 %id)
CD174917 embryonic stem cells, WA01, passage 38 .g 1 to 483 21 to 503 R17G AAA   484/503
(96 %)
7 diff
(98.7 %id)
CD175234 embryonic stem cells, WA01, passage 38 .g 1 to 483 19 to 500 R17G AAA   483/500
(96 %)
9 diff
(98.2 %id)
CD246660 embryonic stem cells, WA01, passage 38 .g 1 to 488 21 to 508 exact tiling clone, AAA   489/508
(96 %)
6 diff
(98.9 %id)
CD248753 embryonic stem cells, WA01, passage 38 .g 1 to 483 24 to 506 exact AAA   484/506
(95 %)
6 diff
(98.9 %id)
AV763398 bone marrow .g 1 to 430 2 to 422 exact     422/424
(99 %)
8 diff
(98.2 %id)
BM765500 stomach .g 1 to 482 2 to 483 exact tiling clone,   483/483
(100 %)
0 diff
(100 %id)
AW161320 brain, frontal lobe .g 7 to 431 1 to 425 R11G     425/425
(100 %)
1 diff
(99.8 %id)
AW162089 brain, frontal lobe .g 7 to 463 1 to 456 R11G fully sequenced,   456/456
(100 %)
6 diff
(98.7 %id)
CN431909 embryonic stem cells, DMSO-treated H9 cellline .g 8 to 489 1 to 482 exact     482/486
(99 %)
4 diff
(99.2 %id)
BF726223 eye, lens .g 12 to 488 1 to 477 exact AAA   477/477
(100 %)
1 diff
(99.8 %id)
BQ640762 eye, retina .g 13 to 488 1 to 476 exact AAA   476/476
(100 %)
0 diff
(100 %id)
BM699477 eye, fetal eyes .g 20 to 483 1 to 463 exact fully sequenced, AAA   463/463
(100 %)
1 diff
(99.8 %id)
AA357660 Prostate .g 27 to 290 1 to 265 R11G A21X     265/265
(100 %)
2 diff
(99.3 %id)
CN431849 embryonic stem cells, DMSO-treated H9 cellline .g 27 to 489 1 to 463 exact     463/467
(99 %)
1 diff
(99.8 %id)
CN431896 embryonic stem cells, cell lines H1, H7, andH9 .g 33 to 478 1 to 446 exact AAA   446/446
(100 %)
3 diff
(99.4 %id)
BE392097 endometrium, adenocarcinoma cell line, uterus .g 34 to 469 1 to 437 exact     437/437
(100 %)
2 diff
(99.6 %id)
BM048400 carcinoma, cell line, Prostate .g 47 to 476 1 to 430 exact AAA   430/430
(100 %)
3 diff
(99.4 %id)
AA374192 lung .g 56 to 404 3 to 354 R11G     352/367
(95 %)
10 diff
(97.3 %id)
AI832428 colon .g 66 to 486 421 to 1 exact     421/421
(100 %)
4 diff
(99.1 %id)
AW156903 brain, frontal lobe .g 85 to 486 406 to 5   fully sequenced,   402/406
(99 %)
1 diff
(99.8 %id)
BM670121 eye, fetal eyes .g 85 to 483 416 to 19   fully sequenced, AAA   398/398
(100 %)
1 diff
(99.8 %id)
AI720599 colon .g 88 to 488 401 to 1       401/401
(100 %)
1 diff
(99.8 %id)
BE765708 nervous_tumor .g 100 to 405 317 to 12       306/317
(96 %)
2 diff
(99.4 %id)
BM849399 myeloma .h-u 1 to 524 3 to 526   tiling clone,   526/526
(100 %)
0 diff
(100 %id)
BM845348 myeloma .h-u 1 to 288 3 to 290       290/290
(100 %)
1 diff
(99.7 %id)
BM846375 myeloma .h-u 1 to 501 3 to 503       503/503
(100 %)
0 diff
(100 %id)
BM846127 myeloma .h-u 1 to 350 3 to 352       352/352
(100 %)
0 diff
(100 %id)
DW441730 Liver .h-u 4 to 233 9 to 237       229/237
(96 %)
6 diff
(97.5 %id)
AA379185 skin .h-u 33 to 205 1 to 178       178/180
(98 %)
7 diff
(96.2 %id)
BM922564 leukocyte .h-u 141 to 801 27 to 690       664/1101
(60 %)
10 diff
(99.1 %id)
CN431943 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h-u 287 to 831 1 to 545 exact     545/545
(100 %)
6 diff
(98.9 %id)
CN431873 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h-u 313 to 1080 1 to 767 exact     767/767
(100 %)
1 diff
(99.9 %id)
TI_149292288   .h-u 347 to 1193 949 to 118 exact AAA   832/892
(93 %)
25 diff
(97.2 %id)
BG950062 colon .h-u 503 to 700 198 to 2       197/203
(97 %)
0 diff
(100 %id)
TI_149306947   .h-u 505 to 1193 817 to 137 R2S L3Q C4P Q5R P6K ... AAA   681/878
(77 %)
27 diff
(97.0 %id)
CN268442 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h-u 506 to 790 35 to 320       286/330
(86 %)
4 diff
(98.8 %id)
BM795032 Ascites, stomach .h-u 506 to 713 39 to 246       208/246
(84 %)
6 diff
(97.6 %id)
AL037456 brain .h-u 509 to 1198 28 to 717 exact tiling clone, AAA   690/717
(96 %)
6 diff
(99.2 %id)
N70320 liver and spleen .h-u 526 to 836 1 to 317 exact fully sequenced, Submitted on the opposite strand 317/317
(100 %)
3 diff
(99.1 %id)
AW470266 carcinoid, lung .h-u 527 to 958 1 to 439 exact   Submitted on the opposite strand 439/454
(96 %)
6 diff
(98.7 %id)
BM974484 lung .h-u 529 to 1193 682 to 19 exact AAA   664/665
(99 %)
4 diff
(99.4 %id)
AW407172 lymph .h-u 543 to 774 14 to 245       232/245
(94 %)
7 diff
(97.2 %id)
TI_154145009   .h-u 543 to 879 94 to 431 exact     338/669
(50 %)
11 diff
(98.4 %id)
TI_154148273   .h-u 543 to 1085 95 to 636 exact     542/549
(98 %)
7 diff
(98.8 %id)
CA306494 Alveolar Macrophage, lung .h-u 561 to 1198 651 to 14 exact tiling clone, AAA   640/640
(100 %)
0 diff
(100 %id)
CA311229 Human Lung Epithelial cells, lung .h-u 602 to 1198 615 to 19   AAA   597/597
(100 %)
4 diff
(99.4 %id)
W04268 liver and spleen .h-u 806 to 1198 387 to 1   fully sequenced, Submitted on the opposite strand 387/387
(100 %)
3 diff
(99.3 %id)
BF694622 muscle (skeletal) .i 1 to 412 3 to 411       411/724
(56 %)
12 diff
(98.4 %id)
BU660542 blood .i 1 to 459 12 to 470   tiling clone,   460/471
(97 %)
23 diff
(95.2 %id)
BG485681 lung .i 10 to 410 1 to 405       405/866
(46 %)
8 diff
(99.1 %id)
CA394757 eye, RPE/choroid .i 16 to 365 1 to 350       350/350
(100 %)
0 diff
(100 %id)
CN431871 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .i 33 to 627 1 to 595   tiling clone,   595/595
(100 %)
0 diff
(100 %id)
AW364287 denis_drash .i 444 to 767 1 to 323 Y52H I54T C55M T56Y S57N tiling clone,   323/323
(100 %)
9 diff
(97.3 %id)
CN431965 embryonic stem cells, DMSO-treated H9 cellline .i 472 to 752 1 to 281   tiling clone,   281/281
(100 %)
0 diff
(100 %id)
EC520298.
matches multiple genes
Prostate .i 509 to 601 1 to 93     also hits gene fortey, plawzeeby, RPL41P1, RPL41P5, skaror 93/93
(100 %)
2 diff
(97.9 %id)
BE707908 head_neck .i 521 to 673 170 to 16       155/173
(89 %)
0 diff
(100 %id)
AW373431 breast .i 536 to 737 23 to 224       202/231
(87 %)
2 diff
(99.2 %id)
AI903521 breast .i 539 to 725 1 to 187       187/187
(100 %)
0 diff
(100 %id)
AI903562 breast .i 539 to 725 187 to 1       187/187
(100 %)
0 diff
(100 %id)
AW373429 breast .i 544 to 737 1 to 194       194/201
(96 %)
4 diff
(98.1 %id)
CN431955 embryonic stem cells, DMSO-treated H9 cellline .i 544 to 734 1 to 191       191/191
(100 %)
0 diff
(100 %id)
EC477597.
matches multiple genes
Prostate .i 546 to 635 1 to 90     also hits gene fortey, plawzeeby, RPL41P1 90/90
(100 %)
2 diff
(97.8 %id)
EC529116 Prostate .i 550 to 635 90 to 6       85/90
(94 %)
0 diff
(100 %id)
F21761 pectoral muscle (after mastectomy) .i 555 to 753 1 to 197       197/201
(98 %)
3 diff
(98.6 %id)
AW749760 breast .i 557 to 737 1 to 180       180/187
(96 %)
7 diff
(96.3 %id)
EC494574.
matches multiple genes
Prostate .i 561 to 650 1 to 89     also hits gene fortey, plawzeeby, RPL41P1 89/89
(100 %)
1 diff
(98.9 %id)
AW373434 breast .i 562 to 737 1 to 177       177/184
(96 %)
4 diff
(97.9 %id)
EC547216.
matches multiple genes
Prostate .i 565 to 653 89 to 1     also hits gene LOC400590, LOC100287260, seystyby, wuslawbu 89/89
(100 %)
0 diff
(100 %id)
BP356335   .j 1 to 581 1 to 580   tiling clone,   580/582
(99 %)
3 diff
(99.5 %id)
DA025355   .j 181 to 743 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
W16905 lung .k 1 to 335 1 to 339   tiling clone, fully sequenced,   339/339
(100 %)
5 diff
(98.6 %id)
CV408966 head_neck .k 11 to 285 14 to 295       282/298
(94 %)
17 diff
(94.3 %id)
BE081128 breast .k 37 to 352 19 to 336   tiling clone,   318/338
(94 %)
5 diff
(98.6 %id)
GD138937   .k 304 to 463 160 to 1   tiling clone, Submitted on the opposite strand 160/160
(100 %)
4 diff
(97.5 %id)
N80911 lung .k 305 to 725 422 to 1 exact fully sequenced,   422/422
(100 %)
3 diff
(99.3 %id)
BG272427 head/neck, nasopharyngeal carcinoma .k 323 to 463 8 to 148     Submitted on the opposite strand 141/169
(83 %)
1 diff
(99.5 %id)
AJ709475 heart .k 329 to 726 422 to 25 exact tiling clone, Submitted on the opposite strand 398/422
(94 %)
0 diff
(100 %id)
DA386695 thalamus .l 1 to 585 6 to 590 exact tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
BU603556 mixed (pool of 40 RNAs) .m 1 to 556 5 to 560 exact tiling clone,   560/887
(63 %)
9 diff
(99.0 %id)
CD247007 embryonic stem cells, WA01, passage 38 .m 1 to 555 21 to 574 exact tiling clone, AAA   555/574
(96 %)
7 diff
(98.8 %id)
W07148 lung .m 17 to 552 3 to 543 S11I R12* fully sequenced,   541/543
(99 %)
8 diff
(98.6 %id)
AA379521 skin .m 25 to 323 1 to 300       300/300
(100 %)
2 diff
(99.4 %id)
AI149832   .m 88 to 550 481 to 19 exact AAA   463/463
(100 %)
0 diff
(100 %id)
N91537 lung .m 152 to 556 402 to 1 exact fully sequenced,   402/402
(100 %)
0 diff
(100 %id)
DA534848 heart .n 1 to 551 2 to 552 S13X tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
TI_154131731   Gene RPL41andZC3H10, variant not shown         This clone was ignored    
TI_159691462   Gene RPL41andZC3H10, variant not shown         This clone was ignored    
209 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k, .l, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI