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Gene ZSCAN18TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
413 supporting clones for gene ZSCAN18 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC354023 brain .a 1 to 554 10 to 563   tiling clone,   554/554
(100 %)
0 diff
(100 %id)
NM_001145542.1   .a 1 to 2573 1 to 2573 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2573/2573
(100 %)
0 diff
(100 %id)
AK294376 amygdala .a 31 to 1934 1 to 1904 exact tiling clone,   1904/1904
(100 %)
0 diff
(100 %id)
DC304462 cerebellum .a 31 to 526 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
DC316326 amygdala .a 31 to 568 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DC302550 cerebellum .a 38 to 364 1 to 327       327/327
(100 %)
0 diff
(100 %id)
DC304739 cerebellum .a 38 to 602 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DA739629   .a 51 to 556 2 to 507   capped   506/506
(100 %)
2 diff
(99.7 %id)
BM744373 Ascites, stomach .a 190 to 735 1 to 546       546/546
(100 %)
0 diff
(100 %id)
BM741427 Ascites, stomach .a 205 to 774 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DB000871 breast, tumor tissue .a 232 to 774 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA074213 cerebellum .a 327 to 886 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA486944 brain .a 347 to 910 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB023926 testis .a 398 to 950 2 to 554   capped   553/554
(99 %)
0 diff
(100 %id)
CD251041 brain, Pituitary .a 422 to 1278 1 to 866       866/866
(100 %)
20 diff
(97.7 %id)
TI_45210568   .a 474 to 1098 89 to 713       625/713
(87 %)
6 diff
(99.2 %id)
TI_44344541   .a 474 to 1296 87 to 898       812/900
(90 %)
22 diff
(97.6 %id)
DA306810 hippocampus .a 540 to 1117 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
CR982335 T-Lymphocytes .a 778 to 1560 14 to 796       783/798
(98 %)
6 diff
(99.3 %id)
NM_023926.4   .b 1 to 2928 1 to 2928 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2928/2928
(100 %)
0 diff
(100 %id)
DA577822   .b 134 to 707 2 to 575   tiling clone, capped   574/574
(100 %)
6 diff
(99.0 %id)
BG703889 brain, hippocampus .b 134 to 738 1 to 604       604/604
(100 %)
7 diff
(98.9 %id)
DA742730   .b 136 to 511 2 to 377   capped   376/376
(100 %)
0 diff
(100 %id)
DA783947 brain .b 137 to 710 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB062326 testis .b 137 to 598 2 to 463   capped   462/462
(100 %)
0 diff
(100 %id)
DA743123   .b 140 to 593 2 to 455   capped   454/454
(100 %)
1 diff
(99.8 %id)
DA586510 lung .b 142 to 673 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
BC022846 Skin, melanotic melanoma. .b 154 to 2930 1 to 2777 G379E tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2777/2777
(100 %)
1 diff
(100.0 %id)
BE384316 melanotic melanoma, skin .b 173 to 699 1 to 527       527/527
(100 %)
0 diff
(100 %id)
BE384469 melanotic melanoma, skin .b 173 to 886 1 to 705       705/720
(97 %)
15 diff
(98.0 %id)
BE729547 melanotic melanoma, skin .b 173 to 842 1 to 668       668/672
(99 %)
16 diff
(97.7 %id)
BG105786 adrenal cortex carcinoma, cell line, adrenal gland .b 174 to 960 1 to 773       773/866
(89 %)
69 diff
(92.1 %id)
BY797067 eye .b 175 to 800 1 to 626       626/626
(100 %)
0 diff
(100 %id)
DA342945 substantia nigra .b 179 to 663 2 to 486   capped   485/485
(100 %)
0 diff
(100 %id)
DB324795   .b 2398 to 2928 531 to 1       531/531
(100 %)
2 diff
(99.7 %id)
DC330828 hippocampus .c 1 to 576 1 to 576   tiling clone,   576/577
(99 %)
2 diff
(99.7 %id)
NM_001145543.1   .c 1 to 2684 1 to 2684   RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2684/2684
(100 %)
0 diff
(100 %id)
DC397316 testis .c 7 to 570 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
DC328006 caudate nucleus .c 74 to 608 1 to 535       535/535
(100 %)
0 diff
(100 %id)
DC311455 alzheimer cortex .c 77 to 621 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC313882 amygdala .c 77 to 599 1 to 523       523/523
(100 %)
0 diff
(100 %id)
DC420073 uterus .c 88 to 663 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC414063 trachea .c 91 to 664 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
AY280799   .c 108 to 2686 1 to 2579 G379E tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2579/2579
(100 %)
1 diff
(100.0 %id)
DC303763 cerebellum .c 108 to 620 1 to 513       513/513
(100 %)
0 diff
(100 %id)
DC314319 amygdala .c 108 to 683 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC314975 amygdala .c 108 to 670 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC336819 substantia nigra .c 108 to 673 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BP208291 cerebellum .c 108 to 687 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC353121 brain .c 108 to 668 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC375152 brain .c 108 to 677 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC375478 brain .c 108 to 681 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC375506 brain .c 108 to 673 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC375728 brain .c 108 to 689 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC376051 brain .c 108 to 648 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC377564 brain .c 108 to 690 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DC392033 Spleen .c 108 to 673 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
AK022957   .c 115 to 2655 1 to 2541 G389S available from FLJ,   2541/2541
(100 %)
3 diff
(99.9 %id)
DA694131   .c 116 to 685 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB266527 uterus .c 119 to 698 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA069961 cerebellum .c 120 to 694 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA085486 cerebellum .c 120 to 691 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA180192 amygdala .c 120 to 689 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA780616 brain .c 120 to 697 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA870126 Prostate .c 120 to 651 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DB004317 breast, tumor tissue .c 120 to 661 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB158495 thymus .c 120 to 704 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
TI_45214739   .c 121 to 946 119 to 958       839/995
(84 %)
35 diff
(96.5 %id)
DA013949 adrenal gland .c 122 to 677 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA171314 amygdala .c 122 to 678 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA516224 brain .c 122 to 669 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA925405 small intestine .c 122 to 665 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
AL534826 brain, fetal brain .c 131 to 1158 1 to 1024       1026/1118
(91 %)
23 diff
(98.0 %id)
TI_57218992   .c 132 to 904 19 to 792       773/792
(97 %)
22 diff
(97.3 %id)
DC343238 thalamus .c 133 to 663 1 to 531       531/531
(100 %)
0 diff
(100 %id)
DA263335 caudate nucleus .c 136 to 714 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BP218860 caudate nucleus .c 136 to 716 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA532462 brain .c 136 to 731 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA548371   .c 136 to 665 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
AU280805   .c 136 to 701 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BP358718 mammary gland .c 136 to 719 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BP379614 uterus .c 136 to 717 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA004766   .c 137 to 699 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA007444   .c 137 to 689 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA009283 adrenal gland .c 137 to 685 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA010316 adrenal gland .c 137 to 685 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA010347 adrenal gland .c 137 to 689 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA012352 adrenal gland .c 137 to 698 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA017302 adrenal gland .c 137 to 665 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA069794 cerebellum .c 137 to 700 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA071537 cerebellum .c 137 to 706 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA071780 cerebellum .c 137 to 704 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA082154 cerebellum .c 137 to 703 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA093783 cerebellum .c 137 to 665 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA129732 alzheimer cortex .c 137 to 680 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA144757 amygdala .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA145943 amygdala .c 137 to 700 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA153392 amygdala .c 137 to 709 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA153508 amygdala .c 137 to 713 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA153811 amygdala .c 137 to 685 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA154581 amygdala .c 137 to 698 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA162839 amygdala .c 137 to 712 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA167590 amygdala .c 137 to 702 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA168505 amygdala .c 137 to 702 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA172899 amygdala .c 137 to 693 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA179595 amygdala .c 137 to 698 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA198810 brain .c 137 to 705 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA201779 brain .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA202589 brain .c 137 to 711 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA205541 brain .c 137 to 719 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA208381 brain .c 137 to 682 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA208634 brain .c 137 to 686 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA210058 brain .c 137 to 698 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA253081 caudate nucleus .c 137 to 715 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA253584 caudate nucleus .c 137 to 665 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA262316 caudate nucleus .c 137 to 702 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA273172 caudate nucleus .c 137 to 705 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA275365 corpus callosum .c 137 to 691 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA282707 corpus callosum .c 137 to 697 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA283655 corpus callosum .c 137 to 714 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA289869 hippocampus .c 137 to 714 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA292152 hippocampus .c 137 to 723 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA299270 hippocampus .c 137 to 685 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA301085 hippocampus .c 137 to 687 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA304630 hippocampus .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA305137 hippocampus .c 137 to 705 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA309010 hippocampus .c 137 to 714 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA309639 hippocampus .c 137 to 719 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA309958 hippocampus .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA318525 hippocampus .c 137 to 706 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA343438 substantia nigra .c 137 to 732 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA344705 substantia nigra .c 137 to 697 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA345135 substantia nigra .c 137 to 713 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA347196 substantia nigra .c 137 to 678 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA354536 substantia nigra .c 137 to 712 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA364140 subthalamic nucleus .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA364258 subthalamic nucleus .c 137 to 691 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA365711 subthalamic nucleus .c 137 to 709 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA386881 thalamus .c 137 to 711 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA390099 thalamus .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA396931 thalamus .c 137 to 726 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA475111   .c 137 to 686 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA486326 brain .c 137 to 691 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA490865 brain .c 137 to 712 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA491021 brain .c 137 to 699 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA494006 brain .c 137 to 707 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA494735 brain .c 137 to 707 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA505109 brain .c 137 to 685 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA505277 brain .c 137 to 693 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA510981 brain .c 137 to 665 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA510996 brain .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA516864 brain .c 137 to 672 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA516959 brain .c 137 to 667 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA542177 lung .c 137 to 708 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA554029   .c 137 to 699 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA560068 heart .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA565920 heart .c 137 to 713 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA600388   .c 137 to 701 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA622605 Kidney .c 137 to 689 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA627567 Kidney .c 137 to 685 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA627826 Kidney .c 137 to 678 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA688934   .c 137 to 710 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA691227   .c 137 to 700 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA708602   .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA714403   .c 137 to 670 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA743422   .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA752146   .c 137 to 697 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA769900 brain .c 137 to 701 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA771832 brain .c 137 to 688 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA782431 brain .c 137 to 715 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA782675 brain .c 137 to 714 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA791291 brain .c 137 to 765 2 to 630   capped   629/629
(100 %)
0 diff
(100 %id)
DA795636 brain .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA834906 placenta .c 137 to 681 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA844686 placenta .c 137 to 698 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA870810 Prostate .c 137 to 672 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA870935 Prostate .c 137 to 690 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA873808 Prostate .c 137 to 705 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA875051 Prostate .c 137 to 695 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA876768 Prostate .c 137 to 701 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA876890 Prostate .c 137 to 687 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA898953 skeletal muscle .c 137 to 680 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA919650 small intestine .c 137 to 711 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA920415 small intestine .c 137 to 665 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA937471 Spleen .c 137 to 729 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA949859 Spleen .c 137 to 699 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA998338   .c 137 to 694 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA999094 breast, tumor tissue .c 137 to 689 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA999808 breast, tumor tissue .c 137 to 704 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB005896 breast, tumor tissue .c 137 to 672 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB042094 testis .c 137 to 715 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB057626 testis .c 137 to 661 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DB062175 testis .c 137 to 670 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB104352 thymus .c 137 to 686 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB111477 thymus .c 137 to 706 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB141269 thymus .c 137 to 679 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB155233 thymus .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB159981 thymus .c 137 to 704 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB174346 kidney, tumor tissue .c 137 to 701 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB177760 kidney, tumor tissue .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB193387 ovary, tumor tissue .c 137 to 699 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB197582 trachea .c 137 to 714 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB200331 trachea .c 137 to 709 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB200849 trachea .c 137 to 743 2 to 608   capped   607/607
(100 %)
0 diff
(100 %id)
DB206185 trachea .c 137 to 711 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB206687 trachea .c 137 to 720 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB248578 uterus .c 137 to 689 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB253529 uterus .c 137 to 665 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DB254896 uterus .c 137 to 681 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB261651 uterus .c 137 to 673 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB270504 uterus .c 137 to 698 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB271865 uterus .c 137 to 677 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB278693 uterus .c 137 to 659 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DB285195 uterus .c 137 to 669 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB063465 testis .c 138 to 688 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA155604 amygdala .c 139 to 704 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA271856 caudate nucleus .c 140 to 715 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA369755 subthalamic nucleus .c 140 to 706 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA687046   .c 140 to 680 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
BP232830 muscle .c 141 to 722 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA150452 amygdala .c 142 to 673 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA153276 amygdala .c 142 to 705 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA163100 amygdala .c 142 to 708 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA182482 amygdala .c 142 to 708 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA387932 thalamus .c 142 to 742 2 to 602   capped   601/601
(100 %)
0 diff
(100 %id)
DA908796   .c 142 to 696 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB254602 uterus .c 142 to 718 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
AK225548 Kidney .c 143 to 2190 1 to 2048   tiling clone,   2048/2048
(100 %)
0 diff
(100 %id)
BP274686 Kidney .c 143 to 723 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DB124565 thymus .c 143 to 708 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA203107 brain .c 144 to 713 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA492723 brain .c 144 to 717 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA685971   .c 144 to 690 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
TI_57202880   .c 148 to 897 30 to 784       755/784
(96 %)
24 diff
(97.0 %id)
DA770915 brain .c 148 to 673 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DA173837 amygdala .c 150 to 722 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CN421156 embryonic stem cells, cell lines H1, H7, andH9 .c 154 to 810 1 to 657       657/657
(100 %)
0 diff
(100 %id)
BQ062339 lymph, lymphoma, cell line .c 162 to 951 1 to 793       793/1044
(75 %)
7 diff
(99.4 %id)
BQ063893 lymph, lymphoma, cell line .c 162 to 951 1 to 790       790/1020
(77 %)
10 diff
(99.1 %id)
BQ066580 lymph, lymphoma, cell line .c 162 to 958 1 to 798       798/1051
(75 %)
13 diff
(98.8 %id)
DA940801 Spleen .c 168 to 757 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
TI_57196787   .c 171 to 975 38 to 833       799/834
(95 %)
18 diff
(97.9 %id)
AL534825 brain, fetal brain .c 1577 to 2632 1047 to 1       1047/1047
(100 %)
19 diff
(98.2 %id)
DB103176 thymus .d 1 to 531 2 to 532   tiling clone, capped   531/531
(100 %)
0 diff
(100 %id)
BP209815 cerebellum .d 28 to 608 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA026192   .d 30 to 598 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA395486 thalamus .d 30 to 588 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA775393 brain .d 30 to 585 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA927839 small intestine .d 30 to 591 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA025433   .d 41 to 608 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA298395 hippocampus .d 41 to 601 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA447301 tongue, tumor tissue .d 41 to 617 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA511502 brain .d 41 to 618 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA032412   .d 43 to 603 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA848157 placenta .d 51 to 622 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA504180 brain .d 57 to 605 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BP356500 mammary gland .d 57 to 639 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA012027 adrenal gland .d 58 to 615 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA171062 amygdala .d 58 to 580 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA171206 amygdala .d 58 to 627 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA172236 amygdala .d 58 to 549 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA267407 caudate nucleus .d 58 to 617 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA276453 corpus callosum .d 58 to 619 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA284572 corpus callosum .d 58 to 614 2 to 558   capped   557/559
(99 %)
1 diff
(99.9 %id)
DA287764 corpus callosum .d 58 to 605 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA299200 hippocampus .d 58 to 627 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA352336 substantia nigra .d 58 to 614 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA356242 subthalamic nucleus .d 58 to 611 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA393882 thalamus .d 58 to 648 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA472052   .d 58 to 839 2 to 785   capped   784/859
(91 %)
14 diff
(98.4 %id)
DA496978 brain .d 58 to 588 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA498368 brain .d 58 to 628 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA509154 brain .d 58 to 626 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA513824 brain .d 58 to 628 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA520115 brain .d 58 to 605 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA523013 brain .d 58 to 600 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA523358 brain .d 58 to 623 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA523599 brain .d 58 to 621 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA637742 Liver .d 58 to 611 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA678482   .d 58 to 607 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA715071   .d 58 to 588 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA719694   .d 58 to 618 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA743308   .d 58 to 531 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
DA793290 brain .d 58 to 531 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
DA867744 Prostate .d 58 to 597 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA871457 Prostate .d 58 to 576 2 to 520   capped   519/520
(99 %)
1 diff
(99.9 %id)
DA876195 Prostate .d 58 to 549 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA878764 Prostate .d 58 to 635 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA924818 small intestine .d 58 to 625 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA950378 Spleen .d 58 to 628 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA957132 Spleen .d 58 to 620 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB110302 thymus .d 58 to 630 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB166494 thyroid gland .d 58 to 748 2 to 690   capped   689/693
(99 %)
6 diff
(99.2 %id)
DB203364 trachea .d 58 to 605 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB241530 trachea .d 58 to 628 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA173354 amygdala .d 59 to 483 2 to 427   capped   426/426
(100 %)
2 diff
(99.6 %id)
DA626277 Kidney .d 61 to 596 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA490293 brain .d 65 to 542 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
BI490902 pooled brain, lung, testis .d 65 to 848 10 to 790       781/847
(92 %)
21 diff
(97.6 %id)
TI_43960914   .d 65 to 848 10 to 790       781/847
(92 %)
21 diff
(97.6 %id)
AL539971 brain, fetal brain .d 68 to 1127 1 to 1051   tiling clone,   1051/1058
(99 %)
22 diff
(98.0 %id)
AL513756 placenta .d 75 to 1100 1 to 1024       1024/1045
(97 %)
15 diff
(98.6 %id)
AA377502 synovial membrane .d 77 to 399 1 to 321       321/321
(100 %)
4 diff
(98.8 %id)
AW957423   .d 78 to 573 1 to 496       496/496
(100 %)
12 diff
(97.6 %id)
BI919119 brain .d 81 to 874 1 to 792       792/792
(100 %)
11 diff
(98.7 %id)
TI_57242069   .d 81 to 874 1 to 792       792/792
(100 %)
11 diff
(98.7 %id)
TI_57197519   .d 84 to 859 30 to 807       778/809
(96 %)
17 diff
(97.9 %id)
BI820677 pooled brain, lung, testis .d 87 to 859 1 to 773       773/775
(99 %)
18 diff
(97.7 %id)
BP320813 placenta .d 98 to 693 1 to 596       596/598
(99 %)
3 diff
(99.5 %id)
DB205794 trachea .d 98 to 667 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BC006205 Muscle, rhabdomyosarcoma .d 596 to 2661 1 to 2066   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2066/2066
(100 %)
0 diff
(100 %id)
BE297391 muscle, rhabdomyosarcoma .d 614 to 1289 1 to 671   available from MGC,   671/738
(90 %)
9 diff
(98.8 %id)
BU509294 leiomyosarcoma, uterus .d 652 to 1418 1 to 773       773/960
(80 %)
17 diff
(98.3 %id)
BC002386 Muscle, rhabdomyosarcoma .d 1190 to 2635 787 to 2232   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1446/2232
(64 %)
6 diff
(99.8 %id)
BC006198 Muscle, rhabdomyosarcoma .d 1190 to 2635 787 to 2232   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1446/2232
(64 %)
6 diff
(99.8 %id)
BC012812 Muscle, rhabdomyosarcoma .d 1190 to 2635 787 to 2232   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1446/2232
(64 %)
6 diff
(99.8 %id)
BX372383   .d 1379 to 1871 499 to 1       499/508
(98 %)
26 diff
(94.9 %id)
BX401856   .d 1580 to 2611 1019 to 1       1019/1031
(98 %)
27 diff
(97.4 %id)
AL568143 brain, fetal brain .d 1651 to 2592 933 to 1       933/933
(100 %)
28 diff
(97.0 %id)
BM709577 eye, optic nerve .d 1679 to 2172 1 to 494   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 494/494
(100 %)
0 diff
(100 %id)
AL049448 uterus .d 1728 to 2635 1 to 908   available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 908/908
(100 %)
0 diff
(100 %id)
BI490862 pooled brain, lung, testis .d 1739 to 2558 829 to 1       829/1140
(72 %)
33 diff
(97.2 %id)
TI_43960915   .d 1739 to 2558 829 to 1       829/1140
(72 %)
33 diff
(97.2 %id)
BF220011 muscle, rhabdomyosarcoma .d 1844 to 2574 731 to 6       726/782
(92 %)
0 diff
(100 %id)
TI_154047368   .d 1884 to 2645 816 to 63   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 754/924
(81 %)
14 diff
(98.5 %id)
TI_149275380   .d 1909 to 2645 803 to 81   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 723/725
(99 %)
25 diff
(96.6 %id)
TI_159677670   .d 1918 to 2664 51 to 796       746/1084
(68 %)
5 diff
(99.6 %id)
BM693257 eye, Retina Foveal and Macular .d 2001 to 2294 1 to 295   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 295/295
(100 %)
0 diff
(100 %id)
TI_151705974   .d 2002 to 2663 763 to 101   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 663/1266
(52 %)
20 diff
(98.5 %id)
CA412630 Chondrosarcoma Grade II, Left Pelvis .d 2023 to 2645 641 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 623/623
(100 %)
0 diff
(100 %id)
BQ024996 placenta .d 2031 to 2635 623 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 605/613
(98 %)
4 diff
(99.4 %id)
TI_151713163   .d 2043 to 2665 745 to 118       628/1243
(50 %)
0 diff
(100 %id)
BQ030065 lung, Metastatic Chondrosarcoma .d 2107 to 2635 547 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 529/529
(100 %)
0 diff
(100 %id)
BU733590 eye, optic nerve .d 2142 to 2640 517 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 499/499
(100 %)
1 diff
(99.8 %id)
AU159447 thyroid gland .d 2255 to 2663 409 to 1       409/411
(99 %)
3 diff
(99.3 %id)
BM668577 eye, Retina Foveal and Macular .d 2264 to 2663 418 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 400/400
(100 %)
1 diff
(99.8 %id)
AW411298 muscle, rhabdomyosarcoma .d 2351 to 2635 348 to 64   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 285/288
(98 %)
0 diff
(100 %id)
FN119931 breast carcinoma .d 2578 to 2662 1 to 86       86/87
(98 %)
2 diff
(97.8 %id)
C00457   .d 2619 to 2669 1 to 51   tiling clone,   51/51
(100 %)
0 diff
(100 %id)
NM_001145544.1   .e 1 to 2218 1 to 2218 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2218/2218
(100 %)
0 diff
(100 %id)
DA611622   .e 137 to 717 2 to 582   tiling clone, capped   581/581
(100 %)
1 diff
(99.9 %id)
AL537788 brain, fetal brain .e 399 to 1307 1 to 903   fully sequenced,   903/903
(100 %)
24 diff
(97.4 %id)
CR997563 T-Lymphocytes .e 426 to 1032 1 to 608   tiling clone,   608/610
(99 %)
2 diff
(99.7 %id)
CD109216 brain, Pituitary .e 475 to 1275 26 to 831       806/872
(92 %)
8 diff
(99.1 %id)
CR617795 thymus .e 591 to 2180 1 to 1590   tiling clone,   1590/1590
(100 %)
0 diff
(100 %id)
BX457463 thymus .e 591 to 1225 1 to 639   fully sequenced, AAA   639/639
(100 %)
4 diff
(99.4 %id)
CA390826 eye, RPE/choroid .e 629 to 1268 1 to 641       641/641
(100 %)
1 diff
(99.9 %id)
BG924346 cartilage .e 642 to 1189 79 to 625       547/564
(96 %)
8 diff
(98.6 %id)
DN601865 human embryonic stem cells .e 668 to 950 1 to 283       283/283
(100 %)
0 diff
(100 %id)
BX437781 thymus .e 1195 to 2180 978 to 1   fully sequenced,   978/978
(100 %)
20 diff
(98.0 %id)
AL566996 brain, fetal brain .e 1277 to 2199 915 to 1   tiling clone, fully sequenced,   915/915
(100 %)
71 diff
(92.3 %id)
AK296417 thalamus .f 1 to 1042 1 to 1042   tiling clone,   1042/1042
(100 %)
0 diff
(100 %id)
BM927141 brain .f 356 to 954 1 to 600       600/1123
(53 %)
5 diff
(99.6 %id)
BU557327 ovary, teratocarcinoma, cell line .f 731 to 1507 1 to 778   tiling clone,   778/881
(88 %)
12 diff
(98.7 %id)
AY279352   .g 1 to 1976 1 to 1976   tiling clone, AAA   1976/1976
(100 %)
3 diff
(99.9 %id)
BC017411 lung .g 488 to 1976 4 to 1492   tiling clone, available from MGC, AAA   1489/1489
(100 %)
3 diff
(99.8 %id)
CB987158 Pooled-Glandular .g 918 to 1534 1 to 624       624/802
(77 %)
26 diff
(96.8 %id)
AW748714 breast .g 983 to 1413 450 to 21       430/451
(95 %)
0 diff
(100 %id)
AW748720 breast .g 983 to 1395 422 to 12       411/423
(97 %)
0 diff
(100 %id)
DA337823 hippocampus .g 1114 to 1709 2 to 597   tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
AA326500 brain, cerebellum .g 1139 to 1706 1 to 571       571/575
(99 %)
30 diff
(94.8 %id)
AW962218   .g 1140 to 1687 1 to 545       545/552
(98 %)
17 diff
(97.0 %id)
BF943650 nervous_normal .g 1147 to 1644 508 to 14     Submitted on the opposite strand 495/509
(97 %)
0 diff
(100 %id)
BE967775 brain .g 1162 to 1487 156 to 480       398/480
(82 %)
18 diff
(96.3 %id)
AK126140 thymus .g 1614 to 4042 1 to 2430 exact tiling clone, available from FLJ,   2430/2430
(100 %)
2 diff
(100.0 %id)
DA781040 brain .g 1793 to 2369 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
DB192174 ovary, tumor tissue .g 1925 to 2457 2 to 539   capped   538/538
(100 %)
4 diff
(99.3 %id)
DA420685 cervix .g 2015 to 2523 2 to 510   capped   509/509
(100 %)
1 diff
(99.9 %id)
DA749262   .h 1 to 559 5 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DB196440 trachea .h 1 to 510 5 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
DB448348 testis .h 6 to 425 1 to 423       423/423
(100 %)
10 diff
(97.7 %id)
BX401857   .h 11 to 1010 1 to 993   tiling clone,   993/993
(100 %)
19 diff
(98.1 %id)
DA075287 cerebellum .h 20 to 585 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AU133753 ovary, tumor tissue .i 1 to 656 5 to 662   tiling clone, capped   661/661
(100 %)
3 diff
(99.6 %id)
BG771652 testis .i 24 to 834 1 to 818 M136C L137C L138W G139A S140P ... tiling clone,   818/818
(100 %)
22 diff
(97.4 %id)
CA388826 eye, RPE/choroid .i 44 to 469 1 to 426       426/426
(100 %)
0 diff
(100 %id)
DB098669 testis .i 1027 to 1590 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
CN282869 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i 1148 to 1452 32 to 336       305/336
(90 %)
6 diff
(98.3 %id)
CK004970 brain/CNS, Human Brain - Frontal Cortex .i 1180 to 1762 1 to 583   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 583/583
(100 %)
1 diff
(99.9 %id)
DB371343 ovary, tumor tissue .i 1203 to 1762 558 to 1       558/558
(100 %)
14 diff
(97.5 %id)
CA388825 eye, RPE/choroid .i 1256 to 1774 523 to 5   tiling clone,   519/523
(99 %)
0 diff
(100 %id)
AI375002   .i 1295 to 1765 471 to 1   tiling clone,   471/471
(100 %)
0 diff
(100 %id)
AI740634 pooled .i 1302 to 1765 464 to 1       464/464
(100 %)
0 diff
(100 %id)
AA988318 breast .i 1387 to 1761 375 to 1       375/375
(100 %)
0 diff
(100 %id)
AA513692 breast .i 1393 to 1761 369 to 1       369/369
(100 %)
0 diff
(100 %id)
AK160376 Spleen .j 1 to 5729 1 to 5731   tiling clone, available from FLJ,   5731/5731
(100 %)
16 diff
(99.8 %id)
DA852086 placenta .j 10 to 552 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
AA452698   .j 933 to 1386 1 to 453       453/453
(100 %)
1 diff
(99.8 %id)
DB122463 thymus .j 1546 to 2120 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA337709 hippocampus .j 1615 to 2212 2 to 599   tiling clone, capped   598/599
(99 %)
1 diff
(99.9 %id)
AA450059   .j 1640 to 1923 284 to 1       284/284
(100 %)
0 diff
(100 %id)
DA624841 Kidney .j 2683 to 3223 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
BF377562 testis_normal .j 2841 to 3095 255 to 1       255/255
(100 %)
2 diff
(99.3 %id)
DB267594 uterus .j 2843 to 3335 2 to 494   capped   493/493
(100 %)
1 diff
(99.8 %id)
DA868959 Prostate .j 2989 to 3528 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA513265 brain .j 3056 to 3428 2 to 374   capped   373/373
(100 %)
0 diff
(100 %id)
DA940159 Spleen .j 3071 to 3543 2 to 473   capped   472/472
(100 %)
3 diff
(99.4 %id)
DB121722 thymus .j 3073 to 3633 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA513322 brain .j 3154 to 3718 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
AL119492 amygdala .j 3265 to 3851 12 to 597       586/598
(97 %)
20 diff
(96.7 %id)
CD251670 brain, Pituitary .j 3378 to 4200 26 to 858       833/858
(97 %)
6 diff
(99.4 %id)
D61525   .j 3514 to 4120 1 to 606       606/606
(100 %)
6 diff
(99.1 %id)
BX377571 Placenta Cot 25-normalized .j 3655 to 4647 1 to 989   tiling clone,   989/989
(100 %)
8 diff
(99.2 %id)
BQ721456 sympathetic trunk .j 3801 to 4334 1 to 536       536/935
(57 %)
7 diff
(99.3 %id)
BU845246 ovary, teratocarcinoma, cell line .j 3818 to 4476 26 to 687       662/996
(66 %)
15 diff
(98.5 %id)
BU855985 ovary, teratocarcinoma, cell line .j 3818 to 4601 9 to 798       790/911
(86 %)
10 diff
(99.0 %id)
BU845209 ovary, teratocarcinoma, cell line .j 3819 to 4744 1 to 923   tiling clone,   923/923
(100 %)
9 diff
(99.1 %id)
CB995994 placenta, pre-eclamptic placenta .j 3975 to 4736 27 to 795       769/800
(96 %)
12 diff
(98.5 %id)
BX377570 Placenta Cot 25-normalized .j 4654 to 5691 1023 to 1       1023/1027
(99 %)
31 diff
(97.0 %id)
DB344058 thymus .j 5184 to 5713 530 to 1       530/530
(100 %)
0 diff
(100 %id)
DB320577 Kidney .j 5185 to 5736 553 to 1   tiling clone,   553/553
(100 %)
2 diff
(99.7 %id)
DA811858 ovary, tumor tissue .k 1 to 707 2 to 713   tiling clone, capped   712/713
(99 %)
11 diff
(98.5 %id)
DB001999 breast, tumor tissue .k 240 to 771 2 to 533   tiling clone, capped   532/532
(100 %)
0 diff
(100 %id)
DA741551   .l 1 to 341 2 to 342 exact tiling clone, capped   341/341
(100 %)
0 diff
(100 %id)
DA128106 cerebellum .m 1 to 566 2 to 567 S12P tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DA876509 Prostate .n -9 to 556 11 to 576 exact tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
NR_027135.1   .o 1 to 1778 1 to 1778 exact RefSeq, tiling clone,   1778/1778
(100 %)
0 diff
(100 %id)
AK096238   .o 31 to 1778 1 to 1746   available from FLJ,   1746/1746
(100 %)
7 diff
(99.6 %id)
DA691226   .o 32 to 596 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DB064979 testis .o 32 to 566 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
BM726523 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o 1236 to 1767 1 to 532   fully sequenced, AAA   532/532
(100 %)
0 diff
(100 %id)
DB323140   .o 1243 to 1778 536 to 1       536/536
(100 %)
2 diff
(99.7 %id)
BM681182 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o 1487 to 1767 299 to 19   fully sequenced, AAA   281/281
(100 %)
0 diff
(100 %id)
DB442721 testis .p 1 to 450 2 to 445       445/445
(100 %)
8 diff
(98.3 %id)
DB447971.
matches multiple genes
testis .p 1 to 423 2 to 424   tiling clone, also hits gene ZNF135 424/424
(100 %)
1 diff
(99.8 %id)
DA144670 amygdala .p 8 to 581 2 to 576 exact tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
DA845784 placenta .q 1 to 554 5 to 558 exact tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
DB091883 testis .r 1 to 554 5 to 558 exact tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
DA726959   .s 1 to 549 2 to 550 exact tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DB467879 hippocampus Gene ZSCAN18, variant not shown         This clone was ignored    
DB535008 hippocampus Gene ZSCAN18, variant not shown         This clone was ignored    
DB474907 hippocampus Gene ZSCAN18, variant not shown         This clone was ignored    
DB543741 hippocampus Gene ZSCAN18, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C