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Gene WDR59TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
346 supporting clones for gene WDR59 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CA777098 Pancreas, Purified pancreatic islet .a 1 to 636 1 to 636   tiling clone,   636/636
(100 %)
18 diff
(97.2 %id)
DB447868 testis .a 16 to 416 1 to 399       401/399
(100 %)
10 diff
(97.5 %id)
BX383186   .a 31 to 923 1 to 896       896/896
(100 %)
8 diff
(99.2 %id)
NM_030581.3   .a 31 to 3690 1 to 3660 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 3660/3660
(100 %)
0 diff
(100 %id)
CN258684 embryonic stem cells, cell lines H1, H7, andH9 .a 40 to 636 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BG115556 duodenal adenocarcinoma, cell line, small intestine .a 42 to 666 28 to 652       625/995
(62 %)
7 diff
(99.3 %id)
DB456079 testis .a 46 to 536 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
BI560626 testis .a 46 to 952 6 to 912       907/914
(99 %)
34 diff
(96.3 %id)
TI_44349615   .a 46 to 952 89 to 995       907/997
(90 %)
34 diff
(96.6 %id)
CN258686 embryonic stem cells, DMSO-treated H9 cellline .a 52 to 474 1 to 423       423/423
(100 %)
0 diff
(100 %id)
BF343138 brain, glioblastoma with EGFR amplification .a 55 to 791 1 to 739       739/1191
(62 %)
12 diff
(99.0 %id)
BU850134 ovary, teratocarcinoma, cell line .a 79 to 988 1 to 914       914/916
(99 %)
14 diff
(98.5 %id)
CN258688 embryonic stem cells, cell lines H1, H7, andH9 .a 81 to 768 1 to 688       688/688
(100 %)
1 diff
(99.9 %id)
BE791388 lung, small cell carcinoma .a 85 to 615 1 to 535       535/535
(100 %)
8 diff
(98.6 %id)
BE732112 choriocarcinoma, placenta .a 99 to 786 1 to 695       693/945
(73 %)
21 diff
(97.8 %id)
BG336712 choriocarcinoma, placenta .a 100 to 795 21 to 720       700/845
(82 %)
42 diff
(95.1 %id)
CN258683 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 107 to 720 1 to 614       614/614
(100 %)
0 diff
(100 %id)
CN258685 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 107 to 499 1 to 393       393/393
(100 %)
4 diff
(99.0 %id)
DR000540 fetal brain .a 113 to 825 8 to 721       714/721
(99 %)
7 diff
(99.1 %id)
BX393838 Neuroblastoma Cot 25-normalized .a 120 to 1086 1 to 955       955/964
(99 %)
18 diff
(98.2 %id)
EL733259 mixed .a 133 to 823 1 to 690       690/698
(98 %)
11 diff
(98.5 %id)
BG820304 anaplastic oligodendroglioma with 1p/19qloss, brain .a 133 to 857 1 to 726       726/727
(99 %)
5 diff
(99.4 %id)
TI_1948243692   .a 133 to 977 122 to 969   fully sequenced,   848/969
(87 %)
10 diff
(99.0 %id)
TI_1948244013   .a 133 to 974 119 to 957   fully sequenced,   839/957
(87 %)
12 diff
(98.8 %id)
TI_1948243533   .a 135 to 1019 134 to 1021       888/1198
(74 %)
24 diff
(98.0 %id)
TI_1948243853   .a 135 to 1019 125 to 1007       883/1223
(72 %)
17 diff
(98.7 %id)
AA070569   .a 144 to 577 1 to 439       439/442
(99 %)
6 diff
(98.7 %id)
AA345992 NULL, omentum .a 282 to 619 1 to 340       338/341
(99 %)
8 diff
(97.7 %id)
DA103249 cerebellum .a 292 to 833 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BF763234 colon_est .a 304 to 692 389 to 1     Submitted on the opposite strand 389/389
(100 %)
0 diff
(100 %id)
BG822751 adenocarcinoma cell line, colon .a 337 to 1019 1 to 681       681/744
(91 %)
13 diff
(98.3 %id)
BQ722741 dorsal root ganglia .a 400 to 1016 1 to 619       619/999
(61 %)
17 diff
(98.3 %id)
CD642961 Embryonic Stem cells .a 446 to 1186 12 to 752   tiling clone,   741/752
(98 %)
0 diff
(100 %id)
BQ777415 Pancreas, Purified pancreatic islet .a 453 to 1058 1 to 606       606/606
(100 %)
0 diff
(100 %id)
CN258687 embryonic stem cells, cell lines H1, H7, andH9 .a 475 to 675 1 to 201       201/201
(100 %)
1 diff
(99.6 %id)
CK902327 Pancreas, Purified pancreatic islet .a 484 to 1061 1 to 578     Submitted on the opposite strand 578/578
(100 %)
0 diff
(100 %id)
FN089832 breast carcinoma .a 500 to 577 87 to 13     Submitted on the opposite strand 77/91
(84 %)
3 diff
(96.8 %id)
BI598269 brain, hypothalamus .a 507 to 1252 1 to 748       748/756
(98 %)
9 diff
(98.9 %id)
TI_45210995   .a 510 to 1252 86 to 830       745/838
(88 %)
16 diff
(98.1 %id)
AB067510 brain .a 559 to 3690 1 to 3133   available from KIAA,   3133/3133
(100 %)
2 diff
(100.0 %id)
DA517335 brain .a 608 to 1161 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BE781680 eye, retinoblastoma .a 612 to 1267 9 to 664       656/927
(70 %)
4 diff
(99.6 %id)
DA713536   .a 612 to 1119 9 to 516   capped   508/508
(100 %)
0 diff
(100 %id)
BQ071572 brain, neuroblastoma, cell line .a 632 to 1336 1 to 713   AAA   713/1133
(62 %)
17 diff
(98.5 %id)
BC014887 Uterus, leiomyosarcoma .a 639 to 3665 1 to 3027   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 3027/3027
(100 %)
0 diff
(100 %id)
BF881875 lung_tumor .a 640 to 1052 1 to 413       413/413
(100 %)
1 diff
(99.8 %id)
BE884555 leiomyosarcoma, uterus .a 648 to 1222 1 to 575   available from MGC,   575/863
(66 %)
5 diff
(99.5 %id)
CF995779 mixed .a 734 to 1516 26 to 804       779/804
(96 %)
22 diff
(97.3 %id)
BI457041 epithelioid carcinoma cell line, Pancreas .a 744 to 1298 1 to 564       564/966
(58 %)
20 diff
(98.0 %id)
TI_45133828   .a 744 to 1298 58 to 621       564/966
(58 %)
20 diff
(98.0 %id)
FN101253 breast carcinoma .a 779 to 849 1 to 70       70/71
(98 %)
3 diff
(95.8 %id)
BG832363 epithelioid carcinoma cell line, Pancreas .a 782 to 1272 71 to 565       495/565
(87 %)
6 diff
(99.0 %id)
BM011231 brain, neuroblastoma, cell line .a 787 to 1145 1 to 362       362/605
(59 %)
8 diff
(98.7 %id)
TI_59380387   .a 788 to 1145 69 to 429       361/604
(59 %)
7 diff
(98.9 %id)
BX327400   .a 796 to 1520 1 to 723       723/938
(77 %)
16 diff
(98.3 %id)
AL119081 amygdala .a 812 to 1068 1 to 256       256/256
(100 %)
5 diff
(98.1 %id)
CV571535 cornea, eye .a 852 to 1419 1 to 568       568/568
(100 %)
0 diff
(100 %id)
TI_1948244014   .a 944 to 1847 1028 to 129   fully sequenced,   900/1028
(87 %)
12 diff
(98.9 %id)
TI_1948243693   .a 947 to 1847 1017 to 128   fully sequenced,   892/1019
(87 %)
18 diff
(98.3 %id)
BE887877 leiomyosarcoma, uterus .a 956 to 1613 1 to 655       655/924
(70 %)
14 diff
(98.5 %id)
AW848503 colon .a 976 to 1243 1 to 268       268/268
(100 %)
0 diff
(100 %id)
TI_1948243534   .a 1017 to 1847 958 to 130       829/1235
(67 %)
3 diff
(99.8 %id)
TI_1948243854   .a 1017 to 1847 955 to 127       829/1304
(63 %)
5 diff
(99.7 %id)
CD632656   .a 1061 to 1533 1 to 472       472/480
(98 %)
8 diff
(98.4 %id)
CD632655   .a 1062 to 1533 480 to 8       473/480
(98 %)
1 diff
(99.8 %id)
DA004795   .a 1066 to 1640 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA481746   .a 1192 to 1758 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AK091316   .a 1251 to 3690 1 to 2440   available from FLJ,   2440/2440
(100 %)
0 diff
(100 %id)
AX746912   .a 1251 to 3690 1 to 2440       2440/2440
(100 %)
0 diff
(100 %id)
DA479471   .a 1252 to 1809 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BQ878095 dorsal root ganglia .a 1278 to 1776 62 to 569       508/1168
(43 %)
24 diff
(98.0 %id)
CD358651 testis .a 1310 to 2129 1 to 829       829/880
(94 %)
15 diff
(98.3 %id)
BQ309285 breast .a 1311 to 1830 532 to 11       522/532
(98 %)
2 diff
(99.7 %id)
W27989 eye, retina .a 1317 to 1747 1 to 430       430/464
(92 %)
8 diff
(98.3 %id)
BF090941 ovary .a 1320 to 1460 146 to 6       141/146
(96 %)
1 diff
(99.4 %id)
AW379952 head_neck .a 1351 to 1801 1 to 453       454/463
(98 %)
20 diff
(95.7 %id)
AW249027 lung, small cell carcinoma .a 1352 to 1922 10 to 580     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 574/580
(98 %)
6 diff
(99.0 %id)
AW379954 head_neck .a 1394 to 1801 1 to 407       407/411
(99 %)
14 diff
(96.6 %id)
BX352682 Neuroblastoma Cot 10-normalized .a 1569 to 2459 43 to 932       888/932
(95 %)
16 diff
(98.3 %id)
BM475891 eye, retinoblastoma .a 1598 to 2551 1 to 959       959/1050
(91 %)
22 diff
(98.0 %id)
DA150261 amygdala .a 1614 to 2185 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AL832078 human adipose .a 1623 to 3664 1 to 2042   available from DKFZ, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 2042/2042
(100 %)
0 diff
(100 %id)
BF929103 nervous_tumor .a 1625 to 1988 1 to 360       360/361
(99 %)
16 diff
(95.6 %id)
CX782441 human embryonic stem cells .a 1628 to 2390 1 to 762       762/762
(100 %)
3 diff
(99.7 %id)
DB194073 ovary, tumor tissue .a 1689 to 2255 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA380455 thalamus .a 1706 to 2248 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
BI196812 brain, neuroblastoma .a 1725 to 2491 1 to 767       767/767
(100 %)
8 diff
(99.0 %id)
BG910608 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1790 to 2304 1 to 517       517/517
(100 %)
4 diff
(99.3 %id)
BX345109 Neuroblastoma Cot 50-normalized .a 1897 to 2738 1 to 842       842/842
(100 %)
9 diff
(99.0 %id)
BX403329 Neuroblastoma Cot 50-normalized .a 1897 to 2821 1 to 928       928/928
(100 %)
9 diff
(99.1 %id)
AW175839 breast .a 1929 to 2145 1 to 219       219/219
(100 %)
8 diff
(96.4 %id)
BM019095 astrocytoma grade IV, cell line, brain .a 1969 to 2587 1 to 633       631/857
(73 %)
24 diff
(97.2 %id)
TI_59389775   .a 1970 to 2587 61 to 692       629/856
(73 %)
22 diff
(97.5 %id)
BI198547 brain, neuroblastoma .a 2004 to 2764 1 to 764       760/764
(99 %)
20 diff
(97.4 %id)
CX164886 human embryonic stem cells differentiated toan early endodermal cell type .a 2019 to 2883 1 to 865       865/865
(100 %)
1 diff
(99.9 %id)
CB154367 Liver .a 2022 to 2584 1 to 563       563/563
(100 %)
0 diff
(100 %id)
D58463   .a 2067 to 2424 1 to 358       358/358
(100 %)
2 diff
(99.5 %id)
R97564 liver and spleen .a 2133 to 2346 1 to 212       212/212
(100 %)
3 diff
(98.6 %id)
T66403 whole brain .a 2139 to 2626 1 to 483       429/502
(85 %)
25 diff
(95.1 %id)
Z44042 brain, total brain .a 2144 to 2424 1 to 280       280/280
(100 %)
3 diff
(99.0 %id)
R13030 whole brain .a 2145 to 2551 1 to 410       410/420
(97 %)
7 diff
(98.4 %id)
CX164822 human embryonic stem cells differentiated toan early endodermal cell type .a 2146 to 2972 1 to 827       827/827
(100 %)
6 diff
(99.3 %id)
AA195059 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2153 to 2667 1 to 513   fully sequenced, AAA   513/513
(100 %)
4 diff
(99.3 %id)
AA195007 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2186 to 2656 467 to 1   fully sequenced,   467/467
(100 %)
3 diff
(99.4 %id)
BF887726 testis_normal .a 2209 to 2667 12 to 478       477/478
(99 %)
58 diff
(87.9 %id)
BQ070149 brain, neuroblastoma, cell line .a 2221 to 2821 1 to 612   AAA   610/1209
(50 %)
25 diff
(98.0 %id)
BU500935 eye, normal pigmented retinal epithelium .a 2239 to 2794 1 to 556       556/837
(66 %)
10 diff
(98.9 %id)
CN259703 embryonic stem cells, cell lines H1, H7, andH9 .a 2253 to 2509 1 to 257       257/257
(100 %)
0 diff
(100 %id)
AW062942 stomach .a 2328 to 2645 318 to 1       318/318
(100 %)
1 diff
(99.7 %id)
BE728080 melanotic melanoma, skin .a 2352 to 3191 1 to 827       827/854
(96 %)
33 diff
(96.2 %id)
BF026989 melanotic melanoma, skin .a 2353 to 3108 1 to 755       755/755
(100 %)
10 diff
(98.7 %id)
BF026502 melanotic melanoma, skin .a 2354 to 3181 1 to 806       806/972
(82 %)
33 diff
(96.7 %id)
BE729116 melanotic melanoma, skin .a 2358 to 3029 1 to 668       668/669
(99 %)
6 diff
(99.2 %id)
BM906854 brain, hippocampus .a 2362 to 2912 10 to 563       554/1257
(44 %)
27 diff
(97.9 %id)
BF995780 placenta_normal .a 2400 to 2679 1 to 276       276/278
(99 %)
12 diff
(95.7 %id)
CD632654   .a 2445 to 3172 1 to 730       730/734
(99 %)
5 diff
(99.4 %id)
W01495 liver and spleen .a 2463 to 2916 1 to 454       454/454
(100 %)
8 diff
(98.3 %id)
H52292 liver and spleen .a 2464 to 2864 1 to 401       401/405
(99 %)
5 diff
(98.8 %id)
AA011352 liver and spleen .a 2464 to 2721 1 to 261       259/261
(99 %)
2 diff
(99.3 %id)
CA487232   .a 2480 to 3298 1 to 830       830/908
(91 %)
13 diff
(98.6 %id)
CA487355   .a 2480 to 3362 1 to 889       889/893
(99 %)
20 diff
(97.8 %id)
CX752336 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2481 to 3179 1 to 696     Submitted on the opposite strand 696/838
(83 %)
4 diff
(99.6 %id)
W67739 heart .a 2497 to 3098 1 to 594       594/596
(99 %)
14 diff
(97.7 %id)
AV749885 Pituitary .a 2509 to 2761 1 to 246       251/247
(101 %)
11 diff
(95.6 %id)
AW954617   .a 2520 to 3175 1 to 657       657/657
(100 %)
13 diff
(98.1 %id)
T33712 brain .a 2528 to 2893 1 to 366       366/366
(100 %)
5 diff
(98.7 %id)
AW957599   .a 2530 to 3101 18 to 584       567/587
(96 %)
15 diff
(97.5 %id)
Z46180 brain, total brain .a 2530 to 2840 1 to 313       311/313
(99 %)
3 diff
(99.1 %id)
W38534 lung .a 2692 to 3192 1 to 507       507/515
(98 %)
12 diff
(97.7 %id)
F12333 brain, total brain .a 2694 to 2981 1 to 287       287/287
(100 %)
2 diff
(99.4 %id)
T66080 whole brain .a 2705 to 3149 1 to 458       458/459
(99 %)
18 diff
(96.1 %id)
BM797602 Ascites, stomach .a 2705 to 3034 1 to 330       330/330
(100 %)
6 diff
(98.2 %id)
H27029 breast .a 2730 to 3149 1 to 426       426/466
(91 %)
11 diff
(97.7 %id)
AA092921   .a 2733 to 2922 1 to 187       187/196
(95 %)
8 diff
(96.0 %id)
AW804154 uterus .a 2741 to 3084 1 to 353       353/353
(100 %)
23 diff
(93.5 %id)
AW804149 uterus .a 2745 to 3317 28 to 601       574/601
(95 %)
12 diff
(98.1 %id)
CD632653   .a 2754 to 3447 709 to 10       700/709
(98 %)
6 diff
(99.2 %id)
BG250353 adenocarcinoma, cell line, Liver .a 2821 to 3578 13 to 777       765/896
(85 %)
50 diff
(94.5 %id)
TI_149310111   .a 2824 to 3665 921 to 95   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 827/942
(87 %)
18 diff
(98.1 %id)
TI_149307127   .a 2825 to 3682 928 to 73       856/1078
(79 %)
0 diff
(100 %id)
BU634256 cell lines, Chondrosarcoma .a 2845 to 3665 827 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 809/827
(97 %)
14 diff
(98.4 %id)
AW885397 ovary .a 2847 to 3093 256 to 13       244/271
(90 %)
0 diff
(100 %id)
BI222290 cervical carcinoma cell line, cervix .a 2875 to 3604 9 to 740       732/742
(98 %)
5 diff
(99.4 %id)
TI_149297345   .a 2885 to 3694 881 to 84   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 798/950
(84 %)
17 diff
(98.3 %id)
TI_149294933   .a 2903 to 3688 832 to 60       773/1031
(74 %)
0 diff
(100 %id)
R28453 placenta .a 2920 to 3201 1 to 284       284/300
(94 %)
9 diff
(97.0 %id)
TI_154126725   .a 2941 to 3689 798 to 53       746/989
(75 %)
0 diff
(100 %id)
CA502992 Human Lung Epithelial cells, lung .a 2943 to 3665 735 to 18   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 718/718
(100 %)
7 diff
(99.1 %id)
BU621769 cell lines, Chondrosarcoma .a 2949 to 3665 729 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 711/711
(100 %)
8 diff
(98.9 %id)
BM982424 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2957 to 3694 748 to 15   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 734/737
(99 %)
9 diff
(98.8 %id)
BU688448 lung .a 2967 to 3665 715 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 697/697
(100 %)
2 diff
(99.8 %id)
W80559 heart .a 2998 to 3296 1 to 306   fully sequenced,   306/306
(100 %)
11 diff
(96.5 %id)
BF741598 bocio_tumor .a 3040 to 3374 332 to 1     Submitted on the opposite strand 332/338
(98 %)
23 diff
(93.2 %id)
CX782369 human embryonic stem cells .a 3042 to 3696 667 to 13       655/667
(98 %)
0 diff
(100 %id)
BM979039 lung, Primary Lung Epithelial Cells .a 3045 to 3665 640 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 622/622
(100 %)
2 diff
(99.7 %id)
CA311551 Human Lung Epithelial cells, lung .a 3059 to 3665 625 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 607/607
(100 %)
2 diff
(99.7 %id)
CA416795 Chondrosarcoma Cell line .a 3060 to 3665 623 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 605/605
(100 %)
2 diff
(99.7 %id)
BQ772601 Chondrosarcoma Cell line .a 3060 to 3665 622 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 604/604
(100 %)
2 diff
(99.7 %id)
BE695646 breast .a 3071 to 3189 1 to 117       117/117
(100 %)
4 diff
(96.6 %id)
BM985161 lung .a 3072 to 3665 613 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 595/595
(100 %)
1 diff
(99.9 %id)
CK902328 Pancreas, Purified pancreatic islet .a 3080 to 3675 596 to 1     Submitted on the opposite strand 596/596
(100 %)
1 diff
(99.9 %id)
BQ788086 Pancreas, Purified pancreatic islet .a 3081 to 3667 587 to 1       587/587
(100 %)
1 diff
(99.9 %id)
AW821211 stomach .a 3084 to 3633 639 to 91       549/651
(84 %)
0 diff
(100 %id)
BQ185965 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3088 to 3680 1 to 594       594/599
(99 %)
8 diff
(98.7 %id)
AW248588 lung, small cell carcinoma .a 3103 to 3690 598 to 11   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 588/588
(100 %)
3 diff
(99.5 %id)
N50258 multiple sclerosis lesions .a 3112 to 3303 1 to 190   fully sequenced,   190/190
(100 %)
6 diff
(96.9 %id)
W67740 heart .a 3127 to 3697 572 to 1   tiling clone,   572/582
(98 %)
10 diff
(98.3 %id)
AW589381 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3139 to 3668 528 to 1       528/530
(99 %)
5 diff
(99.1 %id)
AW028282 thymus, pooled .a 3165 to 3665 501 to 1       501/501
(100 %)
0 diff
(100 %id)
BF741666 bocio_tumor .a 3166 to 3405 241 to 3     Submitted on the opposite strand 239/241
(99 %)
0 diff
(100 %id)
BF194859 Kidney .a 3167 to 3664 498 to 1       498/499
(99 %)
1 diff
(99.8 %id)
DB314905   .a 3175 to 3690 516 to 1       516/516
(100 %)
0 diff
(100 %id)
AI049987   .a 3181 to 3670 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AI744702 colon .a 3183 to 3691 508 to 1       508/508
(100 %)
1 diff
(99.9 %id)
BE220610 carcinoid, lung .a 3184 to 3664 481 to 1       481/481
(100 %)
0 diff
(100 %id)
BF055063 pooled .a 3185 to 3672 488 to 1       488/488
(100 %)
1 diff
(99.8 %id)
AI686228 Prostate .a 3186 to 3665 480 to 1       480/480
(100 %)
0 diff
(100 %id)
TI_151733103   .a 3190 to 3665 553 to 78   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 476/917
(51 %)
0 diff
(100 %id)
BQ188756 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3191 to 3665 1 to 475   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 475/475
(100 %)
0 diff
(100 %id)
AI021977 liver and spleen .a 3193 to 3686 494 to 1       494/494
(100 %)
4 diff
(99.2 %id)
AA703217 liver and spleen .a 3202 to 3665 464 to 1       464/464
(100 %)
5 diff
(99.0 %id)
AA070449   .a 3202 to 3665 466 to 1       466/466
(100 %)
7 diff
(98.5 %id)
BM792889 Ascites, stomach .a 3204 to 3665 1 to 462   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 462/462
(100 %)
0 diff
(100 %id)
AA813949 germinal center B cell .a 3212 to 3676 464 to 1       464/464
(100 %)
1 diff
(99.8 %id)
DB513034 testis .a 3219 to 3663 1 to 446     Submitted on the opposite strand 446/448
(99 %)
8 diff
(98.3 %id)
AI369155 anaplastic oligodendroglioma, brain .a 3220 to 3667 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AA909526 pooled .a 3222 to 3665 443 to 1       443/444
(99 %)
3 diff
(99.4 %id)
AA585300   .a 3224 to 3445 1 to 219       219/222
(98 %)
15 diff
(93.3 %id)
AI041782 senescent fibroblast .a 3226 to 3672 447 to 1       447/447
(100 %)
1 diff
(99.8 %id)
BE326911 Kidney .a 3226 to 3668 443 to 1       443/443
(100 %)
0 diff
(100 %id)
BM675497 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3229 to 3665 456 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 438/447
(97 %)
4 diff
(99.2 %id)
BM930308 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3229 to 3680 1 to 456       456/459
(99 %)
4 diff
(99.2 %id)
T65321 whole brain .a 3231 to 3667 440 to 1       440/441
(99 %)
12 diff
(97.3 %id)
AA879471 pooled .a 3231 to 3633 402 to 1       402/402
(100 %)
1 diff
(99.8 %id)
AI249174 liver and spleen .a 3233 to 3670 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AA011509 liver and spleen .a 3234 to 3665 450 to 1       450/452
(99 %)
22 diff
(95.2 %id)
AA707057 liver and spleen .a 3238 to 3549 311 to 1       311/311
(100 %)
1 diff
(99.7 %id)
AI291865 carcinoid, lung .a 3238 to 3665 428 to 1       428/428
(100 %)
0 diff
(100 %id)
BF757427 colon .a 3258 to 3513 260 to 3     Submitted on the opposite strand 258/260
(99 %)
0 diff
(100 %id)
N90082 lung .a 3261 to 3665 406 to 1       406/406
(100 %)
4 diff
(99.1 %id)
W80429 heart .a 3266 to 3665 405 to 1   fully sequenced,   405/405
(100 %)
6 diff
(98.6 %id)
BP423135 small intestine .a 3272 to 3665 1 to 394     Submitted on the opposite strand 394/399
(98 %)
2 diff
(99.5 %id)
N49205 multiple sclerosis lesions .a 3273 to 3667 405 to 1   fully sequenced,   405/405
(100 %)
11 diff
(97.3 %id)
BM930778 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3274 to 3665 13 to 404   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 392/404
(97 %)
6 diff
(98.6 %id)
AI571525 adenocarcinoma, Pancreas .a 3275 to 3693 421 to 3       419/421
(99 %)
0 diff
(100 %id)
TI_151733880   .a 3275 to 3665 469 to 79   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 391/963
(40 %)
2 diff
(99.8 %id)
AI248680 liver and spleen .a 3276 to 3674 399 to 1       399/399
(100 %)
1 diff
(99.8 %id)
BM726689 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3281 to 3653 1 to 374   fully sequenced,   374/374
(100 %)
1 diff
(99.8 %id)
BQ185836 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3281 to 3665 1 to 384   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 384/384
(100 %)
1 diff
(99.8 %id)
BQ189555 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3281 to 3665 1 to 385   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 385/385
(100 %)
0 diff
(100 %id)
AI016885 pooled .a 3283 to 3669 387 to 1       387/387
(100 %)
0 diff
(100 %id)
AI806516 pooled .a 3283 to 3693 412 to 2       411/412
(99 %)
0 diff
(100 %id)
AW006083 anaplastic oligodendroglioma, brain .a 3284 to 3693 412 to 2       411/412
(99 %)
0 diff
(100 %id)
AI078245 liver and spleen .a 3285 to 3670 386 to 1       386/386
(100 %)
1 diff
(99.8 %id)
AA677395 liver and spleen .a 3287 to 3665 378 to 1       378/378
(100 %)
2 diff
(99.5 %id)
AA705229 liver and spleen .a 3287 to 3669 382 to 1       382/382
(100 %)
1 diff
(99.8 %id)
AI078383   .a 3287 to 3674 388 to 1       388/388
(100 %)
1 diff
(99.8 %id)
AW192351 adenocarcinoma, Pancreas .a 3290 to 3671 382 to 1       382/382
(100 %)
1 diff
(99.8 %id)
BF056404 pooled .a 3291 to 3696 407 to 2       406/407
(99 %)
0 diff
(100 %id)
BE855971 Prostate .a 3302 to 3546 1 to 245     Submitted on the opposite strand 245/250
(98 %)
2 diff
(99.2 %id)
CA776815 Pancreas, Purified pancreatic islet .a 3312 to 3689 379 to 1       379/379
(100 %)
5 diff
(98.7 %id)
AA861044   .a 3325 to 3693 370 to 1       370/370
(100 %)
1 diff
(99.8 %id)
AA721081 germinal center B cell .a 3326 to 3690 376 to 12   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 365/365
(100 %)
0 diff
(100 %id)
BM685295 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3326 to 3679 358 to 1   fully sequenced, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 358/358
(100 %)
2 diff
(99.5 %id)
AI362629 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3329 to 3690 362 to 1       362/362
(100 %)
2 diff
(99.5 %id)
AA912986 pooled .a 3347 to 3669 322 to 1       322/322
(100 %)
1 diff
(99.7 %id)
AI432292 pooled .a 3347 to 3669 323 to 1       323/323
(100 %)
0 diff
(100 %id)
Z41704 brain, total brain .a 3352 to 3665 314 to 1       314/314
(100 %)
0 diff
(100 %id)
H52529 liver and spleen .a 3352 to 3645 304 to 1       304/347
(87 %)
16 diff
(95.4 %id)
AI142652 pooled .a 3355 to 3690 336 to 1       336/336
(100 %)
0 diff
(100 %id)
AA635948 invasive tumor (cell line), Prostate .a 3357 to 3690 352 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 334/334
(100 %)
0 diff
(100 %id)
T33711 brain .a 3357 to 3665 309 to 1       309/309
(100 %)
0 diff
(100 %id)
R40415 whole brain .a 3360 to 3679 325 to 5       321/327
(98 %)
0 diff
(100 %id)
R26445 placenta .a 3361 to 3664 311 to 1       311/322
(96 %)
15 diff
(95.4 %id)
AI023473 liver and spleen .a 3364 to 3685 322 to 1       322/322
(100 %)
5 diff
(98.5 %id)
BF054989 pooled .a 3378 to 3665 288 to 1       288/288
(100 %)
3 diff
(99.0 %id)
AA702238 liver and spleen .a 3396 to 3665 270 to 1       270/270
(100 %)
0 diff
(100 %id)
AI802968 pooled .a 3396 to 3691 296 to 1       296/296
(100 %)
0 diff
(100 %id)
AA705217 liver and spleen .a 3402 to 3669 268 to 1       268/268
(100 %)
1 diff
(99.7 %id)
BX504419   .a 3406 to 3696 290 to 2     Submitted on the opposite strand 289/300
(96 %)
0 diff
(100 %id)
AI564880 anaplastic oligodendroglioma, brain .a 3417 to 3668 252 to 1       252/252
(100 %)
0 diff
(100 %id)
F03255 brain, total brain .a 3423 to 3665 243 to 1       243/243
(100 %)
0 diff
(100 %id)
AI184889 pooled .a 3424 to 3689 266 to 1       266/266
(100 %)
0 diff
(100 %id)
BE221781 Kidney .a 3433 to 3666 233 to 1       233/233
(100 %)
1 diff
(99.6 %id)
FN127046 breast carcinoma .a 3446 to 3526 1 to 81       81/81
(100 %)
0 diff
(100 %id)
AI796437 2 pooled tumors (clear cell type), Kidney .a 3448 to 3670 222 to 1       222/222
(100 %)
4 diff
(98.2 %id)
BM681473 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3452 to 3679 230 to 1   fully sequenced,   230/230
(100 %)
4 diff
(98.3 %id)
AI225245 lymph node, lymphoma, follicular mixed small and largecell .a 3456 to 3665 236 to 27   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 210/210
(100 %)
0 diff
(100 %id)
BQ184153 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3461 to 3679 223 to 1   fully sequenced, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 223/223
(100 %)
2 diff
(99.2 %id)
AI678321 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3484 to 3665 182 to 1       182/182
(100 %)
1 diff
(99.5 %id)
AI986254 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3587 to 3665 79 to 1       79/79
(100 %)
0 diff
(100 %id)
BC004519 Lung, small cell carcinoma .b 1 to 1952 1 to 1952 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 1952/1952
(100 %)
0 diff
(100 %id)
AW611799 Kidney .b 1584 to 1952 369 to 1       369/369
(100 %)
0 diff
(100 %id)
AF370390   .c 1 to 2591 2 to 2592 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2592/2592
(100 %)
0 diff
(100 %id)
DA521352 brain .c 91 to 651 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
CR595181 T cells (Jurkat cell line) .d 1 to 1556 1 to 1556 exact tiling clone,   1556/1556
(100 %)
0 diff
(100 %id)
BX426422 T cells (Jurkat cell line) .d 1 to 804 1 to 804   fully sequenced,   804/804
(100 %)
1 diff
(99.9 %id)
AL525819 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 7 to 780 1 to 780   fully sequenced,   780/780
(100 %)
19 diff
(97.6 %id)
CR600875 Neuroblastoma Cot 25-normalized .d 169 to 1539 1 to 1371       1371/1371
(100 %)
0 diff
(100 %id)
AL527889 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 169 to 858 1 to 689   fully sequenced,   689/689
(100 %)
1 diff
(99.9 %id)
AL562571 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 719 to 1539 820 to 1   fully sequenced,   820/820
(100 %)
0 diff
(100 %id)
BX426421 T cells (Jurkat cell line) .d 774 to 1556 780 to 1   fully sequenced,   780/780
(100 %)
9 diff
(98.9 %id)
AL527888 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 797 to 1539 744 to 1   fully sequenced,   744/744
(100 %)
3 diff
(99.6 %id)
DC394950 testis .e 1 to 559 1 to 559   tiling clone,   559/559
(100 %)
0 diff
(100 %id)
DB455604 testis .e 5 to 459 1 to 455       455/455
(100 %)
0 diff
(100 %id)
BI464844 testis .e 27 to 644 1 to 621       621/641
(96 %)
13 diff
(98.0 %id)
AK302557 testis .e 32 to 1783 1 to 1752 exact tiling clone,   1752/1752
(100 %)
0 diff
(100 %id)
DC401092 testis .e 32 to 553 1 to 522       522/522
(100 %)
0 diff
(100 %id)
BM930401 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 857 to 1118 1 to 263   fully sequenced,   263/263
(100 %)
1 diff
(99.7 %id)
CB242181 Human Lung Epithelial cells, lung .e 949 to 1670 739 to 19   AAA   721/721
(100 %)
2 diff
(99.8 %id)
BM683854 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 1057 to 1670 632 to 19   fully sequenced, AAA   614/614
(100 %)
2 diff
(99.7 %id)
AA702154 liver and spleen .e 1076 to 1661 594 to 10       585/594
(98 %)
0 diff
(100 %id)
DB521489 testis .e 1206 to 1672 1 to 467     Submitted on the opposite strand 467/468
(99 %)
2 diff
(99.6 %id)
DB521049 testis .e 1218 to 1670 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
AA463415.
matches multiple genes
  .e 1220 to 1671 456 to 4     also hits gene FAM177A1 453/456
(99 %)
1 diff
(99.8 %id)
R43806 whole brain .e 1221 to 1671 461 to 8       454/470
(96 %)
4 diff
(99.2 %id)
AW000977 Kidney .e 1274 to 1670 398 to 1       398/398
(100 %)
5 diff
(98.8 %id)
BX394962 Neuroblastoma Cot 25-normalized .e 1316 to 1618 322 to 21       302/322
(93 %)
0 diff
(100 %id)
AI886057 adenocarcinoma, Pancreas .e 1386 to 1671 289 to 4       286/289
(98 %)
0 diff
(100 %id)
BF096090 uterus_tumor .e 1389 to 1641 1 to 253       253/253
(100 %)
4 diff
(98.5 %id)
BF508517   .e 1395 to 1670 293 to 18   AAA   276/276
(100 %)
0 diff
(100 %id)
F34844 pectoral muscle (after mastectomy) .e 1402 to 1670 1 to 269       269/280
(96 %)
3 diff
(99.0 %id)
AI872514 adenocarcinoma, Pancreas .e 1412 to 1671 263 to 4       260/264
(98 %)
0 diff
(100 %id)
AW976173   .e 1414 to 2069 658 to 1     Submitted on the opposite strand 658/679
(96 %)
17 diff
(97.5 %id)
CN278652 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1491 to 2231 9 to 748   tiling clone,   740/748
(98 %)
6 diff
(99.2 %id)
AI703131 carcinoid, lung .e 1517 to 2069 553 to 1       553/553
(100 %)
3 diff
(99.5 %id)
BE551051 carcinoid, lung .e 1522 to 2069 548 to 1       548/548
(100 %)
1 diff
(99.9 %id)
BE670816 carcinoid, lung .e 1560 to 2073 514 to 1       514/514
(100 %)
1 diff
(99.9 %id)
AA702126 liver and spleen .e 1567 to 2090 524 to 1       524/524
(100 %)
1 diff
(99.9 %id)
AI694395 carcinoid, lung .e 1576 to 2073 498 to 1       498/498
(100 %)
2 diff
(99.6 %id)
AA777413 liver and spleen .e 1577 to 2090 514 to 1       514/514
(100 %)
1 diff
(99.9 %id)
AI248701 liver and spleen .e 1608 to 2092 485 to 1       485/485
(100 %)
1 diff
(99.8 %id)
AI298112 carcinoid, lung .e 1615 to 2073 459 to 1       459/459
(100 %)
1 diff
(99.8 %id)
AA714855 germinal center B cell .e 1671 to 2077 409 to 3       407/409
(99 %)
0 diff
(100 %id)
AA767682 germinal center B cell .e 1688 to 2077 392 to 3       390/392
(99 %)
0 diff
(100 %id)
BF094236 uterus_tumor .e 1695 to 2030 7 to 342       336/342
(98 %)
5 diff
(98.6 %id)
AI268559 carcinoid, lung .e 1714 to 2069 357 to 1       357/357
(100 %)
5 diff
(98.6 %id)
BG433918 Kidney .e 1733 to 2194 1 to 462       462/463
(99 %)
1 diff
(99.8 %id)
DB261614 uterus .e 1747 to 2311 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AI634536 carcinoid, lung .e 2028 to 2542 515 to 1       515/515
(100 %)
0 diff
(100 %id)
CK003327 brain/CNS, Human Brain - Cerebellar Cortex .e 2110 to 2787 1 to 671   tiling clone,   671/694
(96 %)
10 diff
(98.6 %id)
BQ778569 Pancreas, Purified pancreatic islet .e 2350 to 2923 1 to 574   tiling clone,   574/574
(100 %)
3 diff
(99.5 %id)
BU783394 insulinoma, Pancreas .e 3008 to 3299 1 to 292   tiling clone, fully sequenced,   292/292
(100 %)
5 diff
(98.3 %id)
CA867169 Pancreas, Purified pancreatic islet .e 3224 to 3801 578 to 1   tiling clone,   578/578
(100 %)
0 diff
(100 %id)
BU783147 insulinoma, Pancreas .e 3269 to 3818 553 to 1   tiling clone, fully sequenced,   553/553
(100 %)
5 diff
(99.1 %id)
BQ778347 Pancreas, Purified pancreatic islet .e 3329 to 3804 476 to 1   tiling clone,   476/476
(100 %)
5 diff
(99.0 %id)
F06662 brain, total brain .e 3745 to 4105 1 to 361   tiling clone,   361/361
(100 %)
4 diff
(98.9 %id)
R19646 whole brain .e 3746 to 4143 1 to 400   tiling clone, Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 400/420
(95 %)
9 diff
(97.9 %id)
DA040389 bladder .e 4052 to 4617 2 to 567   tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
BE787037 large cell carcinoma, lung .e 4438 to 5166 1 to 721   tiling clone,   721/721
(100 %)
8 diff
(98.9 %id)
R44432 whole brain .e 5537 to 5914 406 to 23   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 384/384
(100 %)
13 diff
(96.7 %id)
F02932 brain, total brain .e 5625 to 5914 290 to 1       290/290
(100 %)
0 diff
(100 %id)
AK022332 mammary gland .f 1 to 2066 2 to 2067 exact tiling clone, available from FLJ,   2067/2067
(100 %)
0 diff
(100 %id)
AU122091 mammary gland .f 1 to 804 2 to 805   capped   804/804
(100 %)
2 diff
(99.8 %id)
AU147770 mammary gland .f 1525 to 2066 541 to 1       541/542
(99 %)
9 diff
(98.4 %id)
DC309243 cerebellum .g 1 to 561 1 to 561   tiling clone,   561/561
(100 %)
5 diff
(99.2 %id)
DA806328 brain .g 168 to 716 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
CX784613 human embryonic stem cells .g 506 to 1302 1 to 797   tiling clone,   797/797
(100 %)
0 diff
(100 %id)
BI757450 brain .h 1 to 882 1 to 873 F43L V44* tiling clone,   875/911
(96 %)
35 diff
(96.2 %id)
TI_57220407   .h 1 to 882 28 to 900 F43L V44*     875/938
(93 %)
40 diff
(95.8 %id)
CT001779 T-Lymphocytes .i 1 to 934 1 to 936 E240S S241P F242L V243X V244X ... tiling clone,   936/937
(99 %)
8 diff
(99.2 %id)
TI_57182654   .j 1 to 779 30 to 808 N157Q K158* tiling clone,   779/809
(96 %)
10 diff
(98.8 %id)
BI771212 pooled lung and spleen .j 6 to 779 1 to 774 N157Q K158* tiling clone,   774/775
(99 %)
4 diff
(99.5 %id)
DB289697 uterus .k 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
CR743478   .l 1 to 593 1 to 592 Q77X A130V     592/592
(100 %)
2 diff
(99.7 %id)
AA393120   .l 1 to 450 1 to 450   tiling clone, fully sequenced,   450/450
(100 %)
0 diff
(100 %id)
AA412730   .l 420 to 593 174 to 1   tiling clone, fully sequenced,   174/174
(100 %)
0 diff
(100 %id)
BG201833   .m 1 to 527 9 to 535 M4L S102N tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 527/535
(98 %)
8 diff
(98.6 %id)
DC321880 brain .n 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
0 diff
(100 %id)
R83640 liver and spleen .o 1 to 403 1 to 407   tiling clone,   407/487
(83 %)
12 diff
(97.6 %id)
BM793500 Ascites, stomach .o 78 to 613 1 to 536 Q127H tiling clone,   536/536
(100 %)
1 diff
(99.9 %id)
BQ639221 eye, retina .o 111 to 734 1 to 624 exact     624/624
(100 %)
0 diff
(100 %id)
CN259701 embryonic stem cells, cell lines H1, H7, andH9 .o 125 to 706 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
CD632652   .o 131 to 870 9 to 752 exact     744/752
(98 %)
15 diff
(98.1 %id)
DW430098 Liver .o 141 to 515 17 to 391       375/391
(95 %)
8 diff
(98.0 %id)
R21557 whole brain .o 154 to 466 1 to 322       322/326
(98 %)
15 diff
(95.4 %id)
CN259702 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .o 172 to 576 13 to 417       405/417
(97 %)
7 diff
(98.4 %id)
CD632651   .o 176 to 971 811 to 10   tiling clone,   802/811
(98 %)
10 diff
(98.8 %id)
DA823880 pericardium .p 1 to 568 2 to 571 E130G T131N P132T W133L A134G ... tiling clone, capped   570/571
(99 %)
4 diff
(99.3 %id)
CD356223 Blood vessels - aorta, basilar and artery .q 1 to 536 14 to 553 W18C tiling clone,   542/808
(67 %)
17 diff
(97.9 %id)
DB043170 testis .r 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
AA703171 liver and spleen .s-u -9 to 444 454 to 1 V76A tiling clone,   454/454
(100 %)
3 diff
(99.4 %id)
AI022690 liver and spleen .s-u 24 to 444 420 to 1       420/420
(100 %)
4 diff
(99.1 %id)
T75487 liver and spleen .s-u 134 to 436 308 to 1   fully sequenced,   308/308
(100 %)
6 diff
(98.1 %id)
CA393068 eye, RPE/choroid .t 1 to 488 1 to 488 exact tiling clone,   488/488
(100 %)
1 diff
(99.8 %id)
AI902810 breast .u 1 to 499 499 to 1   tiling clone,   499/499
(100 %)
3 diff
(99.4 %id)
AI902809 breast .u 9 to 505 499 to 1       499/499
(100 %)
4 diff
(99.2 %id)
AI902811 breast .u 11 to 505 499 to 2   tiling clone,   498/499
(99 %)
0 diff
(100 %id)
CR594761 Placenta Cot 25-normalized .u 440 to 1857 1 to 1418   tiling clone,   1418/1418
(100 %)
0 diff
(100 %id)
BX396986 Placenta Cot 25-normalized .u 440 to 1123 1 to 676   fully sequenced,   676/676
(100 %)
3 diff
(99.6 %id)
BX396985 Placenta Cot 25-normalized .u 1093 to 1857 768 to 1   fully sequenced,   768/768
(100 %)
10 diff
(98.7 %id)
TI_149297281   .va-u 1 to 980 1030 to 59 L82C S83L S84H Q85K A86H ... tiling clone,   972/1061
(91 %)
20 diff
(98.2 %id)
BM982375 lung, Primary Lung Cystic Fibrosis EpithelialCells .va-u 232 to 954 739 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 721/721
(100 %)
2 diff
(99.8 %id)
AW294156   .va-u 406 to 954 565 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (21/23 A in genome downstream of last aligned base) 548/548
(100 %)
1 diff
(99.9 %id)
W90712 liver and spleen .va-u 523 to 934 424 to 1       424/426
(99 %)
13 diff
(97.0 %id)
AI810162 pooled .va-u 660 to 957 298 to 1       298/298
(100 %)
9 diff
(97.0 %id)
FN054900 breast carcinoma .va-u 804 to 910 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
DA113298 cerebellum .vb-u 1 to 598 2 to 599   tiling clone, capped   598/598
(100 %)
1 diff
(99.9 %id)
BE832422 marrow .vb-u 129 to 516 17 to 402       386/402
(96 %)
6 diff
(98.6 %id)
BX494486 Liver .vb-u 146 to 755 1 to 609 V30A tiling clone,   609/609
(100 %)
5 diff
(99.2 %id)
BQ004907 Chondrosarcoma, Left Pelvis .vc-u 1 to 665 689 to 13 exact tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 671/671
(100 %)
1 diff
(99.9 %id)
BF096089 uterus_tumor .vc-u 80 to 338 19 to 277       259/277
(93 %)
6 diff
(97.9 %id)
DA125760 cerebellum .vd 1 to 565 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB345100.
matches multiple genes
thymus .ve 1 to 536 538 to 1 exact tiling clone, also hits gene huhoya 538/538
(100 %)
2 diff
(99.7 %id)
AI334193 lung .ve 91 to 536 458 to 13 exact tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 446/446
(100 %)
0 diff
(100 %id)
BQ574956 Chondrosarcoma Grade II, Left Pelvis .vf-u 1 to 500 518 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 500/501
(99 %)
6 diff
(98.9 %id)
BP431672   .vg 1 to 356 1 to 353 exact tiling clone,   353/353
(100 %)
2 diff
(99.5 %id)
DW432252 Liver .vh-u 1 to 254 266 to 12 L11F F12I L13F Y14I R16Q ... tiling clone,   255/266
(95 %)
0 diff
(100 %id)
AV653599 corresponding non cancerous liver tissue Gene WDR59, variant not shown         Submitted on the opposite strand    
AV720683 corresponding non cancerous liver tissue Gene WDR59, variant not shown         Submitted on the opposite strand    
AV748095 Pituitary Gene WDR59, variant not shown         This clone was ignored    
DA897174 skeletal muscle Gene WDR59, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB298750 cerebellum Gene WDR59, variant not shown         This clone was ignored    
DA096713 cerebellum Gene WDR59, variant not shown       capped This clone was ignored    
DB298901 cerebellum Gene WDR59, variant not shown         This clone was ignored    
DA098270 cerebellum Gene WDR59, variant not shown       capped This clone was ignored    
DB299328 cerebellum Gene WDR59, variant not shown         Suspected internal deletion, this clone was ignored    
DA103688 cerebellum Gene WDR59, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB309894 hippocampus Gene WDR59, variant not shown              
DA336320 hippocampus Gene WDR59, variant not shown       capped      
T88685 liver and spleen Gene WDR59, variant not shown              
T88769 liver and spleen Gene WDR59, variant not shown              
AA463416   Gene WDR59, variant not shown       fully sequenced, This clone was ignored    
AA463417   Gene WDR59, variant not shown       fully sequenced, This clone was ignored    
AA484890 Ewing's sarcoma Gene WDR59, variant not shown         This clone was ignored    
AA573362 colon Gene WDR59, variant not shown         Suspected internal deletion, this clone was ignored    
AW187982 pooled Gene WDR59, variant not shown         Suspected internal deletion, this clone was ignored    
AW505528 lymph Gene WDR59, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s-u, .t, .u, .va-u, .vb-u, .vc-u, .vd, .ve, .vf-u, .vg, .vh-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI