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Gene CARS2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
519 supporting clones for gene CARS2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB038786 testis CARS2.a 1 to 569 2 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
DB153789 thymus CARS2.a 75 to 648 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA589948 lung CARS2.a 80 to 633 2 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DA930367 small intestine CARS2.a 80 to 652 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DB052699 testis CARS2.a 82 to 653 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
AU252552 neuroblastoma CARS2.a 495 to 1148 45 to 695   tiling clone, to resequence,   651/700
(93 %)
28 diff
(96.0 %id)
AU252553 neuroblastoma CARS2.a 1595 to 2221 655 to 29   tiling clone, to resequence,   627/700
(89 %)
22 diff
(96.9 %id)
AL521343 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized CARS2.b 1 to 877 1 to 877   tiling clone,   877/877
(100 %)
1 diff
(99.9 %id)
BE871495 adenocarcinoma, colon CARS2.b 527 to 1280 1 to 780       702/948
(74 %)
57 diff
(94.0 %id)
CV571480 cornea, eye CARS2.b 890 to 1355 1 to 466   tiling clone,   466/466
(100 %)
1 diff
(99.8 %id)
BP339336 Spleen CARS2.b 891 to 1456 1 to 567       567/567
(100 %)
3 diff
(99.5 %id)
BM825370 Ascites, stomach CARS2.b 898 to 1497 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
BM807561 amelanotic melanoma, cell line, skin CARS2.b 920 to 1511 30 to 624       595/1195
(49 %)
10 diff
(99.2 %id)
BX096638 heart CARS2.b 922 to 1720 1 to 798       798/799
(99 %)
7 diff
(99.2 %id)
BG033221 breast, mammary adenocarcinoma, cell line CARS2.b 939 to 1395 1 to 455       455/455
(100 %)
3 diff
(99.4 %id)
BM831882 stomach CARS2.b 939 to 1468 1 to 528       528/528
(100 %)
5 diff
(99.1 %id)
CV325934 marrow CARS2.b 960 to 1353 397 to 2     Submitted on the opposite strand 396/397
(99 %)
2 diff
(99.5 %id)
AL561984 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized CARS2.b 989 to 1892 901 to 1   tiling clone,   901/901
(100 %)
11 diff
(98.8 %id)
BQ360542 ovary CARS2.b 1001 to 1176 6 to 181       176/190
(92 %)
1 diff
(99.5 %id)
BE618640 eye, retinoblastoma CARS2.b 1012 to 1375 363 to 1       363/415
(87 %)
11 diff
(97.4 %id)
AL577850 placenta CARS2.b 1054 to 1881 827 to 1       805/827
(97 %)
27 diff
(96.8 %id)
BI964798 Islets of Langerhans, Pancreas CARS2.b 1078 to 1556 35 to 513       481/513
(93 %)
10 diff
(98.1 %id)
C18554 placenta CARS2.b 1106 to 1603 1 to 496       496/496
(100 %)
8 diff
(98.4 %id)
BF792247 adrenal cortex carcinoma, cell line, adrenal gland CARS2.b 1122 to 1395 1 to 273       273/273
(100 %)
1 diff
(99.7 %id)
BE782356 eye, retinoblastoma CARS2.b 1146 to 1375 1 to 230       230/230
(100 %)
0 diff
(100 %id)
BM709225 eye, optic nerve CARS2.b 1147 to 1281 1 to 135       135/135
(100 %)
0 diff
(100 %id)
BP428857   CARS2.b 1250 to 1631 1 to 382       382/382
(100 %)
4 diff
(99.0 %id)
AA582037 germ cell tumor CARS2.b 1307 to 1879 496 to 1     Suspected internal deletion 496/496
(100 %)
11 diff
(97.8 %id)
AA582026 germ cell tumor CARS2.b 1323 to 1879 480 to 1   tiling clone, Suspected internal deletion 480/480
(100 %)
9 diff
(98.2 %id)
AA340215 brain CARS2.b 1399 to 1687 1 to 289       289/289
(100 %)
0 diff
(100 %id)
AW752276 colon CARS2.b 1403 to 1627 225 to 1       225/236
(95 %)
6 diff
(97.5 %id)
AA359113 lung CARS2.b 1432 to 1570 1 to 140       140/140
(100 %)
4 diff
(97.2 %id)
T25490   CARS2.b 1491 to 1676 1 to 178       178/180
(98 %)
16 diff
(91.2 %id)
FN086985 breast carcinoma CARS2.b 1536 to 1591 1 to 55       55/56
(98 %)
5 diff
(91.1 %id)
BG489196 large cell carcinoma, lung CARS2.c -11 to 654 1 to 682       682/768
(88 %)
31 diff
(96.0 %id)
BI918739 brain CARS2.c -11 to 743 29 to 783       755/783
(96 %)
13 diff
(98.4 %id)
TI_57241114   CARS2.c -11 to 743 29 to 783       755/783
(96 %)
13 diff
(98.4 %id)
BC007220 Lung, small cell carcinoma CARS2.c -10 to 1812 1 to 1823 Q442P tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1823/1823
(100 %)
3 diff
(99.9 %id)
AW246976 lung, small cell carcinoma CARS2.c -10 to 213 10 to 234     Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 225/234
(96 %)
6 diff
(97.5 %id)
BQ957031 carcinoma, cell line, Prostate CARS2.c -10 to 790 21 to 829       809/990
(81 %)
39 diff
(96.1 %id)
BQ958569 carcinoma, cell line, Prostate CARS2.c -10 to 887 24 to 926       901/995
(90 %)
26 diff
(97.4 %id)
BF219208 brain, glioblastoma CARS2.c -8 to 560 1 to 577       573/577
(99 %)
26 diff
(95.5 %id)
BQ062423 lymph, lymphoma, cell line CARS2.c -8 to 758 1 to 772       772/1115
(69 %)
18 diff
(98.4 %id)
CR600317 Placenta Cot 25-normalized CARS2.c 1 to 1777 9 to 1785   tiling clone,   1785/1785
(100 %)
0 diff
(100 %id)
BX356109 Placenta Cot 25-normalized CARS2.c 1 to 867 9 to 875   fully sequenced,   875/875
(100 %)
1 diff
(99.9 %id)
BM924678 pooled colon, kidney, stomach CARS2.c 1 to 776 19 to 797       787/1170
(67 %)
14 diff
(98.9 %id)
BQ649461 hepatocellular carcinoma, cell line, Liver CARS2.c 1 to 739 18 to 770       761/1018
(74 %)
26 diff
(97.5 %id)
AW182722 cervix, tumor CARS2.c 1 to 338 92 to 429     Submitted on the opposite strand 345/429
(80 %)
6 diff
(98.7 %id)
BQ065740 lymph, lymphoma, cell line CARS2.c 1 to 719 7 to 733       733/1111
(65 %)
19 diff
(98.3 %id)
BQ644340 hepatocellular carcinoma, cell line, Liver CARS2.c 1 to 755 7 to 765       765/948
(80 %)
11 diff
(98.9 %id)
DA914712   CARS2.c 1 to 298 8 to 305   capped   304/304
(100 %)
3 diff
(99.1 %id)
BI911350 leukocyte CARS2.c 1 to 683 33 to 735       708/956
(74 %)
19 diff
(98.1 %id)
TI_57231619   CARS2.c 1 to 683 33 to 735       708/956
(74 %)
19 diff
(98.1 %id)
CB994671 placenta, pre-eclamptic placenta CARS2.c 1 to 790 32 to 825       798/827
(96 %)
47 diff
(94.4 %id)
CB141603 Liver CARS2.c 1 to 582 5 to 586       586/586
(100 %)
2 diff
(99.7 %id)
BQ943759 carcinoma, cell line, Prostate CARS2.c 1 to 862 3 to 875       875/941
(92 %)
20 diff
(97.9 %id)
BQ709023 Spleen CARS2.c 1 to 908 29 to 949       921/958
(96 %)
33 diff
(96.6 %id)
DA897547 skeletal muscle CARS2.c 1 to 329 2 to 330   capped   329/329
(100 %)
0 diff
(100 %id)
AB062436   CARS2.c 2 to 1812 1 to 1817 R69S G70W N71E A72R Y73L ... AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1817/1817
(100 %)
12 diff
(99.4 %id)
BP343455 stomach mucosa CARS2.c 2 to 582 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP343626 stomach mucosa CARS2.c 2 to 582 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CR613047 B cells (Ramos cell line) Cot 25-normalized CARS2.c 3 to 1781 1 to 1779       1779/1779
(100 %)
0 diff
(100 %id)
BX364346   CARS2.c 3 to 907 1 to 902       902/910
(99 %)
13 diff
(98.6 %id)
BE383663 melanotic melanoma, skin CARS2.c 5 to 784 1 to 776       776/818
(94 %)
11 diff
(98.7 %id)
BX380411 Placenta Cot 25-normalized CARS2.c 6 to 987 1 to 975       975/975
(100 %)
13 diff
(98.7 %id)
BI518448 leukocyte CARS2.c 7 to 905 1 to 896       896/982
(91 %)
14 diff
(98.6 %id)
TI_44460093   CARS2.c 7 to 905 29 to 924       896/1010
(88 %)
20 diff
(98.1 %id)
CT000464 T-Lymphocytes CARS2.c 7 to 700 1 to 694       694/695
(99 %)
1 diff
(99.9 %id)
BQ229263 melanotic melanoma, skin CARS2.c 9 to 787 1 to 784       784/920
(85 %)
16 diff
(98.3 %id)
BU154512 melanotic melanoma, skin CARS2.c 12 to 754 1 to 750       750/840
(89 %)
15 diff
(98.3 %id)
BG489293 large cell carcinoma, lung CARS2.c 13 to 707 1 to 708       664/713
(93 %)
32 diff
(95.6 %id)
BI823129 pooled brain, lung, testis CARS2.c 13 to 637 1 to 622       622/623
(99 %)
10 diff
(98.4 %id)
BI913684 brain CARS2.c 13 to 726 1 to 720       720/720
(100 %)
12 diff
(98.4 %id)
BM547336 ovary (pool of 3) CARS2.c 13 to 779 17 to 786       770/1182
(65 %)
15 diff
(98.8 %id)
TI_57201534   CARS2.c 13 to 637 29 to 650       622/651
(95 %)
14 diff
(97.9 %id)
TI_57241304   CARS2.c 13 to 726 33 to 752       720/752
(95 %)
12 diff
(98.5 %id)
BX416448 neuroblastoma CARS2.c 14 to 898 1 to 884       884/884
(100 %)
6 diff
(99.4 %id)
BQ942773 large cell carcinoma, lung CARS2.c 14 to 654 19 to 663       645/891
(72 %)
10 diff
(98.9 %id)
CR606350 Neuroblastoma Cot 50-normalized CARS2.c 15 to 1800 1 to 1786       1786/1786
(100 %)
0 diff
(100 %id)
AL529819 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized CARS2.c 15 to 949 1 to 934   fully sequenced,   934/934
(100 %)
2 diff
(99.8 %id)
BX382949   CARS2.c 24 to 919 1 to 893       893/952
(93 %)
9 diff
(99.1 %id)
BG327978 Kidney, renal cell adenocarcinoma CARS2.c 25 to 699 1 to 673       673/882
(76 %)
17 diff
(98.1 %id)
BM920093 pooled pancreas and spleen CARS2.c 25 to 1047 1 to 1030       1030/1031
(99 %)
26 diff
(97.5 %id)
CN260039 embryonic stem cells, DMSO-treated H9 cellline CARS2.c 26 to 297 1 to 272       272/272
(100 %)
1 diff
(99.7 %id)
CR987830 T-Lymphocytes CARS2.c 26 to 712 1 to 687       687/692
(99 %)
1 diff
(99.9 %id)
BE794435 lung, small cell carcinoma CARS2.c 27 to 733 1 to 704       704/707
(99 %)
4 diff
(99.5 %id)
BI760074 pooled colon, kidney, stomach CARS2.c 27 to 769 3 to 749       747/889
(84 %)
22 diff
(97.6 %id)
BQ223209 embryonal carcinoma, cell line, testis CARS2.c 27 to 766 1 to 753       753/909
(82 %)
20 diff
(97.8 %id)
TI_57147572   CARS2.c 27 to 769 35 to 781       747/921
(81 %)
22 diff
(97.7 %id)
BQ709002 Spleen CARS2.c 32 to 296 1 to 264       264/1096
(24 %)
1 diff
(100.0 %id)
CN260036 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells CARS2.c 33 to 662 1 to 630       630/630
(100 %)
2 diff
(99.7 %id)
CX865975 embryonic stem CARS2.c 35 to 707 1 to 672     Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 672/672
(100 %)
2 diff
(99.8 %id)
BE264433 lung, small cell carcinoma CARS2.c 54 to 642 1 to 589       589/590
(99 %)
2 diff
(99.7 %id)
BE539193 cervix CARS2.c 90 to 784 1 to 706       704/706
(99 %)
38 diff
(94.7 %id)
AL709950 human skeletal muscle CARS2.c 111 to 850 1 to 740       740/740
(100 %)
2 diff
(99.8 %id)
BI832974 pooled pancreas and spleen CARS2.c 118 to 784 24 to 705       676/795
(85 %)
42 diff
(94.8 %id)
TI_57168674   CARS2.c 118 to 832 65 to 794       724/836
(86 %)
47 diff
(94.4 %id)
CV572013 cornea, eye CARS2.c 121 to 690 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
CN260035 embryonic stem cells, cell lines H1, H7, andH9 CARS2.c 135 to 898 1 to 765       765/765
(100 %)
5 diff
(99.4 %id)
AA306163   CARS2.c 140 to 660 1 to 521       521/521
(100 %)
0 diff
(100 %id)
DR157365 human embryonic stem cells differentiated toan early endodermal cell type CARS2.c 160 to 919 12 to 772       761/782
(97 %)
10 diff
(98.8 %id)
BU500691   CARS2.c 168 to 1053 5 to 891       887/945
(93 %)
16 diff
(98.4 %id)
BG325469 Kidney, renal cell adenocarcinoma CARS2.c 214 to 743 310 to 847       725/1003
(72 %)
61 diff
(94.0 %id)
BP382199 adipose tissue CARS2.c 224 to 571 264 to 611       611/611
(100 %)
3 diff
(99.6 %id)
AK022180 mammary gland CARS2.c 224 to 1819 248 to 1843   available from FLJ,   1843/1843
(100 %)
1 diff
(100.0 %id)
DA060879 cerebellum CARS2.c 224 to 519 248 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BP212191 cerebrum CARS2.c 224 to 555 249 to 580       575/580
(99 %)
7 diff
(98.8 %id)
CR593997 T cells (Jurkat cell line) Cot10-normalized CARS2.c 224 to 1784 239 to 1799       1799/1799
(100 %)
0 diff
(100 %id)
CR614128 B cells (Ramos cell line) Cot 25-normalized CARS2.c 224 to 1784 252 to 1812       1812/1812
(100 %)
0 diff
(100 %id)
CR615939 Placenta Cot 25-normalized CARS2.c 224 to 1760 239 to 1775       1775/1775
(100 %)
0 diff
(100 %id)
CR626682 Neuroblastoma Cot 10-normalized CARS2.c 224 to 1791 270 to 1837       1837/1837
(100 %)
0 diff
(100 %id)
AL519758 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized CARS2.c 224 to 867 269 to 912   fully sequenced,   888/912
(97 %)
10 diff
(99.0 %id)
BX376495 Neuroblastoma Cot 25-normalized CARS2.c 224 to 790 238 to 804       804/804
(100 %)
2 diff
(99.8 %id)
AL530130 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized CARS2.c 224 to 772 244 to 793       793/793
(100 %)
3 diff
(99.7 %id)
BX355593 Placenta Cot 25-normalized CARS2.c 224 to 987 239 to 995       995/995
(100 %)
13 diff
(98.7 %id)
BX344485   CARS2.c 224 to 919 242 to 933       933/933
(100 %)
14 diff
(98.5 %id)
BX363895   CARS2.c 224 to 949 251 to 972   fully sequenced,   972/972
(100 %)
3 diff
(99.7 %id)
DB499852 hypothalamus CARS2.c 224 to 484 244 to 504       504/504
(100 %)
1 diff
(99.9 %id)
DB501227 hypothalamus CARS2.c 224 to 477 244 to 497       497/497
(100 %)
1 diff
(99.8 %id)
AW327823 Burkitt lymphoma, lymph CARS2.c 224 to 467 253 to 496       496/496
(100 %)
1 diff
(99.8 %id)
AW406754 lymph CARS2.c 224 to 379 247 to 402       402/402
(100 %)
6 diff
(98.6 %id)
BG326717 Kidney, renal cell adenocarcinoma CARS2.c 224 to 775 248 to 798       797/940
(84 %)
31 diff
(96.8 %id)
BG749744 eye, normal pigmented retinal epithelium CARS2.c 224 to 618 239 to 632       632/632
(100 %)
4 diff
(99.4 %id)
BI597463 brain, hypothalamus CARS2.c 224 to 919 249 to 948       947/1067
(88 %)
44 diff
(95.9 %id)
BI601686 brain, hypothalamus CARS2.c 224 to 745 250 to 775       769/775
(99 %)
18 diff
(97.7 %id)
BQ067234 pooled brain, lung, testis CARS2.c 224 to 784 238 to 801       801/1120
(71 %)
8 diff
(99.3 %id)
BQ069082 brain, neuroblastoma, cell line CARS2.c 224 to 790 247 to 814       814/1014
(80 %)
7 diff
(99.4 %id)
BQ069474 brain, neuroblastoma, cell line CARS2.c 224 to 571 280 to 647       645/1285
(50 %)
30 diff
(97.7 %id)
BQ071615 brain, neuroblastoma, cell line CARS2.c 224 to 571 276 to 632       632/1242
(50 %)
18 diff
(98.6 %id)
CB992002 placenta, pre-eclamptic placenta CARS2.c 224 to 747 294 to 823       803/860
(93 %)
21 diff
(97.6 %id)
TI_45209476   CARS2.c 224 to 919 333 to 1032       942/1151
(81 %)
45 diff
(96.1 %id)
TI_45214742   CARS2.c 224 to 745 336 to 861       769/861
(89 %)
18 diff
(98.0 %id)
BP268122 thyroid CARS2.c 224 to 554 265 to 595       595/595
(100 %)
3 diff
(99.5 %id)
BP268123 thyroid CARS2.c 224 to 550 265 to 590       590/594
(99 %)
4 diff
(99.4 %id)
AU121418 mammary gland CARS2.c 224 to 715 248 to 740   capped   739/739
(100 %)
5 diff
(99.4 %id)
NM_024537.2   CARS2.c 224 to 1824 265 to 1865   RefSeq,   1865/1865
(100 %)
2 diff
(99.9 %id)
DA709991   CARS2.c 224 to 500 267 to 543   capped   542/542
(100 %)
4 diff
(99.3 %id)
BM841922 myeloma CARS2.c 224 to 596 250 to 622       622/622
(100 %)
4 diff
(99.4 %id)
DA909025   CARS2.c 224 to 402 249 to 427   capped   426/426
(100 %)
0 diff
(100 %id)
DA966130 stomach CARS2.c 224 to 509 267 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA966145 stomach CARS2.c 224 to 529 267 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DN996433 breast cancer, Mammary gland (cancer tissue) CARS2.c 224 to 565 269 to 610       610/610
(100 %)
5 diff
(99.2 %id)
DB103782 thymus CARS2.c 224 to 511 248 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
TI_154144391   CARS2.c 224 to 577 317 to 671       595/752
(79 %)
16 diff
(97.9 %id)
BG421102 Kidney, renal cell adenocarcinoma CARS2.c 244 to 911 1 to 671       671/978
(68 %)
11 diff
(98.9 %id)
BP297827   CARS2.c 252 to 833 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP305930   CARS2.c 252 to 834 1 to 581       581/581
(100 %)
18 diff
(97.0 %id)
BP328720 rectum CARS2.c 252 to 833 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AU142407   CARS2.c 253 to 1044 2 to 793   capped   792/796
(99 %)
8 diff
(99.0 %id)
CF122173 CNCAP(3)T-225 cell line, Prostate CARS2.c 254 to 933 1 to 680       680/680
(100 %)
6 diff
(99.2 %id)
CF122410 CNCAP(3)T-225 cell line, Prostate CARS2.c 254 to 933 1 to 680       680/680
(100 %)
6 diff
(99.2 %id)
CF122429 CNCAP(3)T-225 cell line, Prostate CARS2.c 254 to 982 1 to 728       728/728
(100 %)
9 diff
(98.8 %id)
CB956796 Pooled-Glandular CARS2.c 255 to 654 1 to 401       401/1099
(36 %)
6 diff
(99.5 %id)
BU158342 large cell carcinoma, lung CARS2.c 257 to 667 1 to 411       411/1111
(36 %)
7 diff
(99.4 %id)
TI_154181670   CARS2.c 261 to 1116 70 to 909       840/883
(95 %)
17 diff
(98.1 %id)
TI_154181990   CARS2.c 261 to 1101 68 to 905       838/839
(99 %)
11 diff
(98.7 %id)
TI_154182009   CARS2.c 261 to 1052 75 to 866       792/801
(98 %)
11 diff
(98.7 %id)
BM463792 leiomyosarcoma, uterus CARS2.c 378 to 1411 1 to 1040       1040/1046
(99 %)
27 diff
(97.5 %id)
BU173736 adenocarcinoma, Pancreas CARS2.c 470 to 1294 1 to 838       838/905
(92 %)
29 diff
(96.8 %id)
BG675297 skin CARS2.c 475 to 1282 1 to 816       816/1033
(78 %)
16 diff
(98.5 %id)
BM927607 lymph, lymphoma, cell line CARS2.c 488 to 1325 1 to 839       839/977
(85 %)
7 diff
(99.3 %id)
CX751958 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass CARS2.c 491 to 1293 1 to 800     Submitted on the opposite strand 800/802
(99 %)
8 diff
(99.1 %id)
BE545731 cervical carcinoma cell line, cervix CARS2.c 557 to 1264 1 to 698       698/888
(78 %)
21 diff
(97.7 %id)
BM724536 eye, fetal eye CARS2.c 564 to 1171 1 to 608   fully sequenced, Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 608/608
(100 %)
1 diff
(99.9 %id)
CR594413 Neuroblastoma Cot 10-normalized CARS2.c 566 to 1788 1 to 1223       1223/1223
(100 %)
0 diff
(100 %id)
AL520832 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized CARS2.c 566 to 1017 1 to 451   fully sequenced,   451/451
(100 %)
0 diff
(100 %id)
BG760938 melanotic melanoma, high MDR (cell line), skin CARS2.c 592 to 1535 1 to 937       937/1092
(85 %)
38 diff
(96.6 %id)
BG764138 melanotic melanoma, high MDR (cell line), skin CARS2.c 592 to 1413 1 to 822       822/822
(100 %)
5 diff
(99.4 %id)
BQ303618 breast CARS2.c 613 to 1224 1 to 611       611/613
(99 %)
15 diff
(97.6 %id)
CD672591 eye, Iris CARS2.c 616 to 1144 1 to 529     Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 529/529
(100 %)
1 diff
(99.9 %id)
CD672600 eye, Iris CARS2.c 616 to 1136 1 to 521       521/521
(100 %)
1 diff
(99.9 %id)
BE618094 eye, retinoblastoma CARS2.c 622 to 1310 1 to 683       683/690
(98 %)
11 diff
(98.5 %id)
CD513429 brain, Pituitary CARS2.c 638 to 1508 1 to 884       884/886
(99 %)
16 diff
(98.2 %id)
CR623160 HeLa cells Cot 25-normalized CARS2.c 711 to 1788 1 to 1078       1078/1078
(100 %)
0 diff
(100 %id)
BX344484   CARS2.c 785 to 1784 999 to 1       999/999
(100 %)
16 diff
(98.4 %id)
BX355592 Placenta Cot 25-normalized CARS2.c 788 to 1760 967 to 1       967/971
(99 %)
10 diff
(99.0 %id)
CD671299 eye, Iris CARS2.c 801 to 1483 1 to 683     Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 683/683
(100 %)
2 diff
(99.8 %id)
W79178 heart CARS2.c 829 to 1228 1 to 402       402/462
(87 %)
14 diff
(97.0 %id)
BX356108 Placenta Cot 25-normalized CARS2.c 837 to 1777 937 to 1   fully sequenced,   937/937
(100 %)
11 diff
(98.9 %id)
AL519757 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized CARS2.c 851 to 1782 938 to 10   fully sequenced,   929/938
(99 %)
4 diff
(99.6 %id)
TI_149285142   CARS2.c 853 to 1819 1041 to 83   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 959/1134
(84 %)
39 diff
(96.6 %id)
BX364345   CARS2.c 854 to 1780 917 to 1       917/975
(94 %)
36 diff
(96.4 %id)
AL529818 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized CARS2.c 888 to 1768 906 to 31   fully sequenced,   876/906
(96 %)
18 diff
(98.1 %id)
BX363894   CARS2.c 888 to 1751 882 to 27   fully sequenced,   856/882
(97 %)
7 diff
(99.3 %id)
TI_149315290   CARS2.c 908 to 1812 996 to 100   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 897/989
(90 %)
25 diff
(97.5 %id)
TI_149274299   CARS2.c 919 to 1819 979 to 88   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 892/1011
(88 %)
21 diff
(98.0 %id)
AL530129 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized CARS2.c 945 to 1800 853 to 1       853/853
(100 %)
53 diff
(93.8 %id)
AL520831 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized CARS2.c 956 to 1788 831 to 1   fully sequenced,   831/831
(100 %)
4 diff
(99.6 %id)
BM801028 melanotic melanoma, skin CARS2.c 963 to 1737 41 to 822       782/1046
(74 %)
15 diff
(98.6 %id)
BM044616 carcinoma, cell line, Prostate CARS2.c 986 to 1761 1 to 779       779/915
(85 %)
9 diff
(99.1 %id)
BU543802 carcinoma, cell line, Prostate CARS2.c 987 to 1804 1 to 817       817/817
(100 %)
1 diff
(99.9 %id)
BX392352 Neuroblastoma Cot 25-normalized CARS2.c 994 to 1811 820 to 1       820/829
(98 %)
44 diff
(94.7 %id)
BG031418 breast, mammary adenocarcinoma, cell line CARS2.c 997 to 1755 1 to 752       752/889
(84 %)
16 diff
(98.3 %id)
TI_154048777   CARS2.c 1042 to 1812 856 to 89   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 768/980
(78 %)
25 diff
(97.5 %id)
BG770028 melanotic melanoma, high MDR (cell line), skin CARS2.c 1054 to 1738 1 to 689       689/689
(100 %)
14 diff
(98.0 %id)
BX380410 Placenta Cot 25-normalized CARS2.c 1063 to 1792 725 to 5       721/788
(91 %)
13 diff
(98.4 %id)
BM042408 melanotic melanoma, cell line, skin CARS2.c 1075 to 1446 1 to 371   fully sequenced,   371/371
(100 %)
3 diff
(99.2 %id)
BU184738 melanotic melanoma, cell line, skin CARS2.c 1078 to 1807 23 to 760       738/975
(75 %)
26 diff
(97.4 %id)
BQ897221 melanotic melanoma, cell line, skin CARS2.c 1078 to 1815 1 to 738   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 738/738
(100 %)
1 diff
(99.9 %id)
BQ677448 melanotic melanoma, cell line, skin CARS2.c 1078 to 1755 1 to 679       679/920
(73 %)
22 diff
(97.7 %id)
BG913024 anaplastic oligodendroglioma with 1p/19qloss, brain CARS2.c 1097 to 1814 1 to 720       720/736
(97 %)
10 diff
(98.7 %id)
BQ883052 Spleen CARS2.c 1116 to 1807 1 to 710       710/1032
(68 %)
34 diff
(96.8 %id)
BG171578 hypernephroma, cell line, Kidney CARS2.c 1130 to 1812 1 to 694       694/714
(97 %)
22 diff
(97.0 %id)
BU626795 Alveolar Macrophage, lung CARS2.c 1138 to 1819 700 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 682/682
(100 %)
0 diff
(100 %id)
BU741705 eye, fetal eye CARS2.c 1141 to 1812 690 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 672/672
(100 %)
4 diff
(99.5 %id)
BI519877 leukocyte CARS2.c 1153 to 1740 601 to 1       601/633
(94 %)
29 diff
(95.5 %id)
TI_44460094   CARS2.c 1153 to 1740 601 to 1       601/633
(94 %)
29 diff
(95.5 %id)
BU628594 Bone, Enchondroma cell line CARS2.c 1158 to 1812 672 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 654/654
(100 %)
2 diff
(99.7 %id)
AW959206   CARS2.c 1159 to 1785 1 to 624       624/624
(100 %)
12 diff
(98.1 %id)
BU680782 lung CARS2.c 1172 to 1819 665 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 647/647
(100 %)
0 diff
(100 %id)
BQ182097 Knee, Osteoarthritic Cartilage CARS2.c 1178 to 1812 654 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 636/636
(100 %)
3 diff
(99.6 %id)
BQ045197 lung, Primary Lung Cystic Fibrosis EpithelialCells CARS2.c 1186 to 1812 645 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 627/627
(100 %)
1 diff
(99.9 %id)
BQ004778 Chondrosarcoma, Left Pelvis CARS2.c 1191 to 1819 647 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 629/630
(99 %)
3 diff
(99.6 %id)
BM968467 lung, Primary Lung Epithelial Cells CARS2.c 1191 to 1819 650 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 632/633
(99 %)
3 diff
(99.6 %id)
CA423174 cell lines, Chondrosarcoma CARS2.c 1193 to 1819 646 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 628/675
(93 %)
3 diff
(99.6 %id)
CX865904 embryonic stem CARS2.c 1205 to 1812 634 to 27   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 608/608
(100 %)
2 diff
(99.7 %id)
BQ775210 Bone, Human Chondrosarcoma Cell Line CARS2.c 1214 to 1819 624 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 606/606
(100 %)
2 diff
(99.7 %id)
CD369062 Alveolar Macrophage, lung CARS2.c 1253 to 1816 581 to 18       564/581
(97 %)
0 diff
(100 %id)
BF436067 pooled CARS2.c 1266 to 1814 552 to 4       549/552
(99 %)
0 diff
(100 %id)
N45116 multiple sclerosis lesions CARS2.c 1279 to 1812 531 to 1       531/531
(100 %)
12 diff
(97.8 %id)
BF032664 adenocarcinoma, ovary CARS2.c 1282 to 1811 1 to 533       533/537
(99 %)
9 diff
(98.4 %id)
AW084042 esophagus, squamous cell carcinoma CARS2.c 1284 to 1682 419 to 21   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 399/419
(95 %)
9 diff
(97.9 %id)
BG912142 anaplastic oligodendroglioma with 1p/19qloss, brain CARS2.c 1285 to 1812 1 to 528   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 528/528
(100 %)
0 diff
(100 %id)
CN260037 embryonic stem cells, DMSO-treated H9 cellline CARS2.c 1298 to 1811 9 to 523       515/523
(98 %)
7 diff
(98.7 %id)
BX376494 Neuroblastoma Cot 25-normalized CARS2.c 1307 to 1757 451 to 1       451/715
(63 %)
11 diff
(98.5 %id)
AU147237 mammary gland CARS2.c 1310 to 1819 513 to 1       513/557
(92 %)
7 diff
(98.8 %id)
DB383993   CARS2.c 1312 to 1815 508 to 1       508/569
(89 %)
13 diff
(97.8 %id)
AV686631 hepatocellular carcinoma CARS2.c 1316 to 1669 1 to 354       354/381
(92 %)
4 diff
(99.0 %id)
T57102 lung CARS2.c 1318 to 1819 502 to 2       501/502
(99 %)
11 diff
(97.9 %id)
AI921439 adenocarcinoma, Pancreas CARS2.c 1324 to 1811 488 to 1       488/489
(99 %)
1 diff
(99.8 %id)
BF060976 pooled CARS2.c 1324 to 1814 494 to 4       491/494
(99 %)
0 diff
(100 %id)
AI589861 anaplastic oligodendroglioma, brain CARS2.c 1327 to 1812 486 to 1       486/486
(100 %)
2 diff
(99.6 %id)
AI744180 ovary, tumor, 5 pooled (see description) CARS2.c 1330 to 1819 492 to 2       491/492
(99 %)
1 diff
(99.8 %id)
AI765477 2 pooled tumors (clear cell type), Kidney CARS2.c 1330 to 1814 489 to 5       485/489
(99 %)
0 diff
(100 %id)
AW301704 Kidney CARS2.c 1330 to 1812 494 to 12   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 483/483
(100 %)
0 diff
(100 %id)
BE048711 Kidney CARS2.c 1330 to 1816 493 to 7       487/493
(98 %)
0 diff
(100 %id)
BF000021 colon, colon tumor, RER+ CARS2.c 1330 to 1814 487 to 2       486/487
(99 %)
2 diff
(99.6 %id)
DB572416 hypothalamus CARS2.c 1334 to 1815 1 to 482     Submitted on the opposite strand 482/482
(100 %)
0 diff
(100 %id)
BF590959 colon, colon tumor, RER+ CARS2.c 1335 to 1819 489 to 5       485/489
(99 %)
0 diff
(100 %id)
F27330 pectoral muscle (after mastectomy) CARS2.c 1336 to 1692 1 to 357       357/357
(100 %)
4 diff
(98.9 %id)
AA814505 brain, substantia nigra CARS2.c 1339 to 1815 478 to 1       478/478
(100 %)
4 diff
(99.2 %id)
F36702 pectoral muscle (after mastectomy) CARS2.c 1342 to 1693 1 to 352       352/352
(100 %)
1 diff
(99.8 %id)
AW250178 lung, small cell carcinoma CARS2.c 1343 to 1812 480 to 11   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 470/470
(100 %)
6 diff
(98.8 %id)
CD672590 eye, Iris CARS2.c 1346 to 1812 487 to 21   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 467/467
(100 %)
0 diff
(100 %id)
DB570996 hypothalamus CARS2.c 1354 to 1815 1 to 462     Submitted on the opposite strand 462/462
(100 %)
0 diff
(100 %id)
AI091536 pooled CARS2.c 1364 to 1819 462 to 7       456/462
(98 %)
1 diff
(99.8 %id)
F21085 pectoral muscle (after mastectomy) CARS2.c 1370 to 1784 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
DB548611 hippocampus CARS2.c 1371 to 1812 1 to 442     Submitted on the opposite strand 442/442
(100 %)
2 diff
(99.6 %id)
DB553425 hypothalamus CARS2.c 1373 to 1813 1 to 442     Submitted on the opposite strand 442/443
(99 %)
4 diff
(99.1 %id)
BE464542 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney CARS2.c 1374 to 1821 451 to 4       448/451
(99 %)
0 diff
(100 %id)
BE550882 carcinoid, lung CARS2.c 1375 to 1812 458 to 21   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 438/438
(100 %)
0 diff
(100 %id)
BM042817 melanotic melanoma, cell line, skin CARS2.c 1385 to 1739 357 to 1   fully sequenced,   357/357
(100 %)
2 diff
(99.5 %id)
AA595324 Prostate, prostate tumor CARS2.c 1386 to 1813 426 to 1       426/426
(100 %)
7 diff
(98.4 %id)
AI282628 lymph node, mantle cell lymphoma CARS2.c 1386 to 1819 436 to 3       434/437
(99 %)
0 diff
(100 %id)
AW051482 pooled CARS2.c 1392 to 1812 438 to 18   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 421/421
(100 %)
2 diff
(99.6 %id)
AA552383 colon, tumor CARS2.c 1394 to 1811 418 to 1       418/418
(100 %)
1 diff
(99.8 %id)
AI539408 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CARS2.c 1394 to 1814 421 to 1       421/421
(100 %)
5 diff
(98.9 %id)
AW439383 serous papillary carcinoma, high grade, 2pooled tumors, uterus CARS2.c 1395 to 1814 426 to 7       420/426
(98 %)
0 diff
(100 %id)
W74424 heart CARS2.c 1414 to 1812 396 to 1       396/396
(100 %)
8 diff
(98.0 %id)
BU736695 eye, Retina Foveal and Macular CARS2.c 1422 to 1819 416 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 398/398
(100 %)
10 diff
(97.5 %id)
AI539163 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus CARS2.c 1430 to 1819 393 to 4       390/394
(98 %)
3 diff
(99.3 %id)
AI540800 B-cell, chronic lymphotic leukemia CARS2.c 1434 to 1814 383 to 3       381/383
(99 %)
0 diff
(100 %id)
AI627226 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus CARS2.c 1434 to 1814 382 to 2       381/382
(99 %)
2 diff
(99.5 %id)
R93239 liver and spleen CARS2.c 1436 to 1798 366 to 1       366/371
(98 %)
8 diff
(97.9 %id)
AI197969 anaplastic oligodendroglioma, brain CARS2.c 1448 to 1812 365 to 1       365/365
(100 %)
2 diff
(99.5 %id)
F28358 pectoral muscle (after mastectomy) CARS2.c 1453 to 1756 1 to 304       304/304
(100 %)
1 diff
(99.7 %id)
AW603390 colon_normal CARS2.c 1455 to 1679 16 to 238       223/242
(92 %)
13 diff
(94.7 %id)
F28538 pectoral muscle (after mastectomy) CARS2.c 1463 to 1788 1 to 326       326/326
(100 %)
0 diff
(100 %id)
AI581201 colon, moderately-differentiated adenocarcinoma CARS2.c 1464 to 1814 356 to 6       351/356
(98 %)
0 diff
(100 %id)
AI445352 poorly differentiated adenocarcinoma withsignet ring cell features, stomach CARS2.c 1468 to 1812 371 to 27   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 345/345
(100 %)
1 diff
(99.8 %id)
AI925258 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus CARS2.c 1468 to 1819 364 to 13   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 352/352
(100 %)
6 diff
(98.3 %id)
CA442575 lung, Lung Focal Fibrosis CARS2.c 1472 to 1812 359 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 341/341
(100 %)
1 diff
(99.8 %id)
BE465167 Kidney CARS2.c 1482 to 1805 324 to 1       324/325
(99 %)
17 diff
(94.8 %id)
AI695830 Prostate CARS2.c 1484 to 1814 332 to 2       331/332
(99 %)
0 diff
(100 %id)
AI074253 senescent fibroblast CARS2.c 1485 to 1814 335 to 6       330/335
(98 %)
0 diff
(100 %id)
AI189933 placenta CARS2.c 1485 to 1812 371 to 44   AAA   328/338
(97 %)
1 diff
(99.8 %id)
BF435987 pooled CARS2.c 1485 to 1814 335 to 6       330/335
(98 %)
0 diff
(100 %id)
AI191005 lung CARS2.c 1486 to 1814 332 to 5       328/332
(98 %)
1 diff
(99.7 %id)
AW603387 colon_normal CARS2.c 1491 to 1679 1 to 184       184/188
(97 %)
16 diff
(91.5 %id)
BF593326 Prostate CARS2.c 1494 to 1821 330 to 2       329/331
(99 %)
4 diff
(98.8 %id)
AW192309 adenocarcinoma, Pancreas CARS2.c 1495 to 1812 318 to 1       318/318
(100 %)
0 diff
(100 %id)
AI479707 anaplastic oligodendroglioma, brain CARS2.c 1503 to 1812 352 to 43       310/352
(88 %)
5 diff
(98.6 %id)
AA733199 heart CARS2.c 1513 to 1812 310 to 12   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 299/299
(100 %)
3 diff
(99.0 %id)
AV660773 corresponding non cancerous liver tissue CARS2.c 1533 to 1819 1 to 287   AAA Submitted on the opposite strand 287/287
(100 %)
1 diff
(99.7 %id)
AI918326 anaplastic oligodendroglioma, brain CARS2.c 1538 to 1814 281 to 5       277/281
(98 %)
0 diff
(100 %id)
AI264792 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CARS2.c 1558 to 1812 271 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 255/255
(100 %)
0 diff
(100 %id)
AI702293 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus CARS2.c 1571 to 1815 245 to 1       245/245
(100 %)
0 diff
(100 %id)
BE222182 carcinoid, lung CARS2.c 1579 to 1812 234 to 1       234/234
(100 %)
0 diff
(100 %id)
AI400896 Prostate CARS2.c 1594 to 1813 220 to 1       220/220
(100 %)
0 diff
(100 %id)
CD672599 eye, Iris CARS2.c 1602 to 1806 205 to 1       205/205
(100 %)
1 diff
(99.6 %id)
AW438940 serous papillary carcinoma, high grade, 2pooled tumors, uterus CARS2.c 1602 to 1812 212 to 1       212/212
(100 %)
4 diff
(98.2 %id)
AI086342 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CARS2.c 1604 to 1819 220 to 5       216/220
(98 %)
0 diff
(100 %id)
T32072 brain CARS2.c 1640 to 1808 169 to 1       169/169
(100 %)
0 diff
(100 %id)
AW059602   CARS2.c 1659 to 1812 1 to 154       154/154
(100 %)
1 diff
(99.4 %id)
D20415   CARS2.c 1659 to 1818 1 to 160     Submitted on the opposite strand 160/164
(97 %)
1 diff
(99.4 %id)
CD671298 eye, Iris CARS2.c 1669 to 1812 180 to 37   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 144/153
(94 %)
2 diff
(98.7 %id)
BF589855 sciatic nerve CARS2.c 1692 to 1815 139 to 16   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 124/124
(100 %)
1 diff
(99.2 %id)
BI043913 ovary CARS2.c 1693 to 1812 9 to 128   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 120/128
(93 %)
6 diff
(95.4 %id)
FN104247 breast carcinoma CARS2.c 1728 to 1814 1 to 87       87/93
(93 %)
1 diff
(99.0 %id)
GD156398   CARS2.c 1737 to 1812 1 to 75   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 75/75
(100 %)
3 diff
(96.0 %id)
AK301907 testis CARS2.d 1 to 1875 4 to 1878 I59T tiling clone,   1878/1878
(100 %)
5 diff
(99.8 %id)
DC396012 testis CARS2.d 1 to 545 4 to 549       549/549
(100 %)
3 diff
(99.5 %id)
DC397418 testis CARS2.d 78 to 633 1 to 557       557/557
(100 %)
3 diff
(99.5 %id)
BP204211 coronary artery CARS2.d 384 to 953 1 to 577       577/581
(99 %)
25 diff
(95.7 %id)
CF122138 CNCAP(3)T-225 cell line, Prostate CARS2.d 464 to 1061 21 to 618       599/618
(96 %)
16 diff
(97.5 %id)
TI_154181630   CARS2.d 464 to 1175 82 to 793       713/919
(77 %)
23 diff
(97.5 %id)
BP369948 testis CARS2.d 467 to 1040 1 to 574       574/574
(100 %)
7 diff
(98.8 %id)
EC503951 Prostate CARS2.d 476 to 570 93 to 1       93/93
(100 %)
2 diff
(97.9 %id)
EC460637 Prostate CARS2.d 479 to 571 92 to 2       91/94
(96 %)
5 diff
(94.7 %id)
TI_57230662   CARS2.d 484 to 1051 51 to 616       566/569
(99 %)
10 diff
(98.3 %id)
BI869070 adenocarcinoma, cell line, Liver CARS2.d 485 to 1051 1 to 565       565/568
(99 %)
10 diff
(98.3 %id)
BE292941 adenocarcinoma cell line, colon CARS2.d 513 to 1174 1 to 656   tiling clone,   656/686
(95 %)
12 diff
(98.3 %id)
BQ326223 colon_normal CARS2.d 521 to 973 463 to 17       447/463
(96 %)
1 diff
(99.8 %id)
BP197562 adrenal gland CARS2.d 524 to 1104 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BQ316555 colon CARS2.d 535 to 1073 1 to 538       538/538
(100 %)
3 diff
(99.5 %id)
BQ316556 colon CARS2.d 535 to 1088 1 to 555       555/555
(100 %)
5 diff
(99.1 %id)
BP303806   CARS2.d 542 to 1122 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
BQ360248 ovary CARS2.d 544 to 795 4 to 255       252/264
(95 %)
9 diff
(96.6 %id)
W79357.
matches multiple genes
heart CARS2.d 544 to 1014 1 to 476     also hits gene NID1 474/478
(99 %)
7 diff
(98.6 %id)
CB124596 Liver CARS2.d 545 to 1109 1 to 565       565/575
(98 %)
2 diff
(99.7 %id)
CB125156 Liver CARS2.d 545 to 1122 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
CB126574 Liver CARS2.d 545 to 1086 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
CB126918 Liver CARS2.d 545 to 968 1 to 424       424/424
(100 %)
5 diff
(98.9 %id)
CB126138 Liver CARS2.d 545 to 1172 1 to 628       628/628
(100 %)
1 diff
(99.9 %id)
CB127062 Liver CARS2.d 545 to 1109 1 to 565       565/575
(98 %)
2 diff
(99.7 %id)
BP330748 rectum CARS2.d 549 to 1128 1 to 580       580/582
(99 %)
3 diff
(99.5 %id)
BX372479   CARS2.d 581 to 1271 683 to 1       683/683
(100 %)
15 diff
(97.9 %id)
BQ421294 large cell carcinoma, lung CARS2.d 582 to 1381 38 to 836       800/844
(94 %)
2 diff
(99.8 %id)
BG675867 skin, squamous cell carcinoma CARS2.d 585 to 1380 1 to 800       800/802
(99 %)
8 diff
(99.1 %id)
BQ327474 kidney_tumor CARS2.d 596 to 1048 457 to 7       451/462
(97 %)
9 diff
(98.1 %id)
BQ316558 colon CARS2.d 614 to 1123 105 to 616       512/616
(83 %)
15 diff
(97.6 %id)
BG746288 adenocarcinoma cell line, colon CARS2.d 642 to 1267 1 to 627       627/627
(100 %)
7 diff
(98.9 %id)
DT216951 brain CARS2.d 652 to 1358 1 to 707       707/707
(100 %)
3 diff
(99.6 %id)
CN260034 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 CARS2.d 655 to 1126 1 to 473       473/473
(100 %)
5 diff
(99.0 %id)
BP248253 Kidney CARS2.d 655 to 1245 1 to 589       589/589
(100 %)
3 diff
(99.5 %id)
BQ324022 colon_ins CARS2.d 773 to 1145 33 to 406       374/406
(92 %)
13 diff
(96.8 %id)
CF146021 CNCAP(3)T-225 cell line, Prostate CARS2.d 790 to 1020 1 to 231       231/231
(100 %)
7 diff
(97.0 %id)
TI_154178391   CARS2.d 797 to 1381 92 to 678       587/604
(97 %)
24 diff
(96.1 %id)
BP429473   CARS2.d 943 to 1259 1 to 317       317/317
(100 %)
3 diff
(99.1 %id)
TI_57243208   CARS2.e 1 to 749 33 to 780   tiling clone,   748/781
(95 %)
11 diff
(98.6 %id)
BI918292 brain CARS2.e 2 to 749 1 to 747   tiling clone,   747/748
(99 %)
5 diff
(99.4 %id)
BX361231 Placenta Cot 25-normalized CARS2.e 727 to 1757 1 to 1017   tiling clone,   1017/1024
(99 %)
21 diff
(98.0 %id)
BF033421 adenocarcinoma, ovary CARS2.e 914 to 1563 1 to 647   tiling clone,   647/651
(99 %)
6 diff
(99.1 %id)
BI481230 Native Retinal Pigment Epithelium sheets, retina CARS2.e 1246 to 1560 1 to 315       315/315
(100 %)
8 diff
(97.5 %id)
DB057649 testis CARS2.f 1 to 532 2 to 533   tiling clone, capped   532/532
(100 %)
2 diff
(99.7 %id)
BU618730 Cell Line, Chondrosarcoma CARS2.f 521 to 1241 739 to 19   tiling clone, AAA   721/721
(100 %)
1 diff
(99.9 %id)
BG004965 placenta_normal CARS2.f 1179 to 1366 187 to 1   tiling clone,   187/205
(91 %)
5 diff
(97.6 %id)
DB048310 testis CARS2.g 1 to 560 2 to 562   tiling clone, capped   561/561
(100 %)
3 diff
(99.5 %id)
TI_154126590   CARS2.g 549 to 1175 721 to 95   tiling clone, AAA   627/941
(66 %)
31 diff
(96.8 %id)
BU630383 cell lines, Chondrosarcoma CARS2.g 717 to 1181 483 to 19   tiling clone, AAA   465/465
(100 %)
8 diff
(98.3 %id)
CA416682 Chondrosarcoma Cell line CARS2.g 766 to 1175 428 to 19   tiling clone, AAA   410/414
(99 %)
5 diff
(98.8 %id)
DA570768 whole embryo, mainly head CARS2.h 1 to 738 2 to 739   tiling clone, capped   738/738
(100 %)
8 diff
(99.0 %id)
AU145649 whole embryo, mainly head CARS2.h 1450 to 1946 498 to 1   tiling clone,   498/549
(90 %)
12 diff
(97.9 %id)
AK091992 Liver CARS2.i 1 to 2316 2 to 2317 exact tiling clone, available from FLJ,   2317/2317
(100 %)
2 diff
(100.0 %id)
AX747298   CARS2.i 1 to 2316 2 to 2317 exact     2317/2317
(100 %)
2 diff
(100.0 %id)
DA637926 Liver CARS2.i 1 to 540 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DW442353 Liver CARS2.i 221 to 438 17 to 235       219/235
(93 %)
6 diff
(97.5 %id)
CN281137 embryonic stem cells, cell lines H1, H7, andH9 CARS2.i 770 to 1427 1 to 657       657/657
(100 %)
4 diff
(99.4 %id)
TI_154110352   CARS2.i 805 to 1440 747 to 112       636/1032
(61 %)
0 diff
(100 %id)
CA448094 Chondrosarcoma, Left Pubic Bone CARS2.i 805 to 1440 665 to 30   tiling clone, AAA   636/662
(96 %)
0 diff
(100 %id)
AA339660 brain CARS2.i 891 to 1070 1 to 180       180/180
(100 %)
0 diff
(100 %id)
BF920245 nervous_tumor CARS2.i 918 to 1387 20 to 486       467/493
(94 %)
7 diff
(98.6 %id)
AI216091 carcinoid, lung CARS2.i 1509 to 1880 1 to 373     Submitted on the opposite strand 373/373
(100 %)
2 diff
(99.5 %id)
AI801985 carcinoid, lung CARS2.i 1509 to 1948 1 to 440     Submitted on the opposite strand 440/440
(100 %)
2 diff
(99.6 %id)
AI912755 carcinoid, lung CARS2.i 1509 to 1994 1 to 486     Submitted on the opposite strand 486/486
(100 %)
0 diff
(100 %id)
AA045269 heart CARS2.i 1617 to 1885 1 to 268   fully sequenced,   268/268
(100 %)
2 diff
(99.3 %id)
DB321246 Liver CARS2.i 1757 to 2316 561 to 1       561/561
(100 %)
1 diff
(99.9 %id)
AA045241 heart CARS2.i 1855 to 2316 458 to 1   fully sequenced,   458/458
(100 %)
4 diff
(99.2 %id)
BG024913 lymph, lymphoma, cell line CARS2.j 1 to 753 1 to 749   tiling clone,   749/819
(91 %)
26 diff
(96.9 %id)
BE676350 B-cell, chronic lymphotic leukemia CARS2.j 434 to 943 510 to 1   tiling clone,   510/510
(100 %)
1 diff
(99.9 %id)
CR996053 T-Lymphocytes CARS2.k 1 to 798 798 to 1   tiling clone, Submitted on the opposite strand 798/799
(99 %)
2 diff
(99.8 %id)
BM544250 ovary (pool of 3) CARS2.k 15 to 906 22 to 917   tiling clone,   896/1081
(82 %)
24 diff
(97.8 %id)
AK124505 cerebellum CARS2.k 48 to 3563 1 to 3517 H53A P54S Q55T S56I T57H ... tiling clone, available from FLJ,   3517/3517
(100 %)
8 diff
(99.8 %id)
DA091380 cerebellum CARS2.k 49 to 577 2 to 531   capped   530/530
(100 %)
4 diff
(99.3 %id)
DB141143 thymus CARS2.k 467 to 823 2 to 358   capped   357/357
(100 %)
1 diff
(99.8 %id)
AL702898 human skeletal muscle CARS2.k 824 to 1559 1 to 736   tiling clone,   736/736
(100 %)
1 diff
(99.9 %id)
CN288786 embryonic stem cells, DMSO-treated H9 cellline CARS2.k 1376 to 2100 1 to 725       725/725
(100 %)
0 diff
(100 %id)
DA204907 brain CARS2.k 1423 to 1983 2 to 563   capped   562/562
(100 %)
5 diff
(99.2 %id)
DB113443 thymus CARS2.k 1432 to 2018 2 to 589   capped   588/588
(100 %)
3 diff
(99.5 %id)
CA314384 Human Lung Epithelial cells, lung CARS2.k 2909 to 3556 668 to 19 G48X V49G R51E H53G P54I ... AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 650/650
(100 %)
2 diff
(99.7 %id)
AI458595 carcinoid, lung CARS2.k 2944 to 3410 1 to 468     Submitted on the opposite strand 468/468
(100 %)
3 diff
(99.4 %id)
AW341145 carcinoid, lung CARS2.k 2944 to 3422 1 to 480     Submitted on the opposite strand 480/480
(100 %)
1 diff
(99.8 %id)
BE466946 carcinoid, lung CARS2.k 2944 to 3419 1 to 477     Submitted on the opposite strand 477/477
(100 %)
1 diff
(99.8 %id)
AW341165 carcinoid, lung CARS2.k 2948 to 3422 1 to 476     Submitted on the opposite strand 476/476
(100 %)
3 diff
(99.4 %id)
DB298313 cerebellum CARS2.k 3028 to 3563 537 to 1       537/537
(100 %)
2 diff
(99.7 %id)
BF061143 fibrotheoma, ovary CARS2.k 3063 to 3558 500 to 4   tiling clone,   497/500
(99 %)
1 diff
(99.8 %id)
AW206599   CARS2.k 3106 to 3556 468 to 18   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 451/451
(100 %)
2 diff
(99.6 %id)
DA063233 cerebellum CARS2.l 1 to 572 2 to 572 exact tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
BM797553 Ascites, stomach CARS2.m 1 to 415 1 to 415   tiling clone,   415/415
(100 %)
4 diff
(99.1 %id)
BU608636 Human Lung Epithelial cells, lung CARS2.m 47 to 815 783 to 16 L23X L27X tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 768/768
(100 %)
1 diff
(99.9 %id)
CN260038 embryonic stem cells, DMSO-treated H9 cellline CARS2.n 1 to 626 5 to 630   tiling clone,   630/630
(100 %)
0 diff
(100 %id)
AW151100 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors CARS2.n 555 to 1021 467 to 1   tiling clone,   467/467
(100 %)
3 diff
(99.4 %id)
BM550174 leukocyte CARS2.o 1 to 704 15 to 723   tiling clone,   709/1136
(62 %)
18 diff
(98.5 %id)
TI_149300363   CARS2.o 271 to 1128 932 to 97   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 836/924
(90 %)
27 diff
(97.1 %id)
BG740931 skin CARS2.o 307 to 1114 1 to 810       810/810
(100 %)
5 diff
(99.4 %id)
BI914793 brain CARS2.p 1 to 797 1 to 796 V97W V98L D99M A100P I101S ... tiling clone,   796/796
(100 %)
3 diff
(99.7 %id)
TI_57244133   CARS2.p 1 to 797 35 to 830 V97W V98L D99M A100P I101S ...     796/830
(95 %)
9 diff
(99.0 %id)
TI_154052603   CARS2.p 100 to 965 932 to 83   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 850/973
(87 %)
24 diff
(97.6 %id)
CX762052 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass CARS2.q 224 to 674 265 to 713 exact tiling clone, Submitted on the opposite strand 713/717
(99 %)
2 diff
(99.8 %id)
BE675735 B-cell, chronic lymphotic leukemia CARS2.r-u 1 to 563 567 to 5   tiling clone,   563/567
(99 %)
0 diff
(100 %id)
DA119521 cerebellum CARS2.r-u 72 to 612 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA797510 brain CARS2.r-u 79 to 646 2 to 570 F121V S123L C124M R125S L126A ... capped   569/569
(100 %)
2 diff
(99.7 %id)
DA238552 brain CARS2.r-u 176 to 745 2 to 571 R102* tiling clone, capped   570/570
(100 %)
2 diff
(99.7 %id)
DB085835 testis CARS2.s-u 1 to 560 2 to 562   tiling clone, capped   561/561
(100 %)
4 diff
(99.3 %id)
BC082264 Pancreas, epithelioid carcinoma CARS2.s-u 73 to 2365 1 to 2295 V95A tiling clone, available from MGC, AAA   2295/2295
(100 %)
8 diff
(99.7 %id)
BQ962797 epithelioid carcinoma cell line, Pancreas CARS2.s-u 77 to 977 1 to 899   available from MGC,   899/900
(99 %)
22 diff
(97.6 %id)
BQ963010 epithelioid carcinoma cell line, Pancreas CARS2.s-u 77 to 831 1 to 770       770/940
(81 %)
25 diff
(97.4 %id)
DA679230   CARS2.s-u 80 to 623 2 to 546   capped   545/545
(100 %)
3 diff
(99.5 %id)
DA905159   CARS2.s-u 80 to 631 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
BG479613 choriocarcinoma, placenta CARS2.s-u 92 to 728 1 to 637       637/637
(100 %)
4 diff
(99.4 %id)
BE466498 Kidney CARS2.s-u 113 to 603 491 to 1       491/491
(100 %)
1 diff
(99.8 %id)
BF306158 muscle, rhabdomyosarcoma CARS2.s-u 133 to 862 1 to 720       720/898
(80 %)
13 diff
(98.6 %id)
BG827820 muscle, rhabdomyosarcoma CARS2.s-u 133 to 938 1 to 813   available from MGC,   813/824
(98 %)
38 diff
(95.4 %id)
BC041586 Muscle, rhabdomyosarcoma CARS2.s-u 134 to 1882 1 to 1749 exact tiling clone, available from MGC, AAA   1749/1749
(100 %)
0 diff
(100 %id)
BF435293 pooled CARS2.s-u 742 to 1167 425 to 1       425/425
(100 %)
9 diff
(97.9 %id)
DA006629   CARS2.s-u 1141 to 1700 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BG705313 brain, hippocampus CARS2.s-u 1143 to 1962 1 to 815       815/815
(100 %)
15 diff
(98.2 %id)
BC042958 Brain, hippocampus CARS2.s-u 1143 to 2953 1 to 1811   tiling clone, available from MGC, AAA   1811/1811
(100 %)
6 diff
(99.7 %id)
BI544784 brain, hippocampus CARS2.s-u 1143 to 1859 1 to 717   available from MGC,   717/717
(100 %)
11 diff
(98.5 %id)
TI_44000648   CARS2.s-u 1145 to 1859 88 to 802       715/802
(89 %)
6 diff
(99.3 %id)
TI_157600154   CARS2.s-u 1177 to 1973 57 to 856     Submitted on the opposite strand 800/904
(88 %)
12 diff
(98.7 %id)
TI_158431636   CARS2.s-u 1177 to 1705 66 to 594   AAA Submitted on the opposite strand 529/594
(89 %)
6 diff
(99.0 %id)
BX112412 placenta CARS2.s-u 1180 to 1705 540 to 15   AAA   526/526
(100 %)
0 diff
(100 %id)
R66269 placenta CARS2.s-u 1224 to 1677 1 to 465     Submitted on the opposite strand 465/465
(100 %)
14 diff
(97.0 %id)
R66974 placenta CARS2.s-u 1250 to 1588 1 to 345     Submitted on the opposite strand 345/419
(82 %)
8 diff
(98.1 %id)
AA947302 pooled CARS2.s-u 1250 to 1722 1 to 473     Submitted on the opposite strand 473/473
(100 %)
3 diff
(99.4 %id)
AA934055 pooled CARS2.s-u 1263 to 1561 1 to 299     Submitted on the opposite strand 299/299
(100 %)
0 diff
(100 %id)
R66268 placenta CARS2.s-u 1348 to 1706 363 to 1     Submitted on the opposite strand 363/363
(100 %)
8 diff
(97.8 %id)
DW465385 Liver CARS2.s-u 1484 to 1826 16 to 358       343/358
(95 %)
6 diff
(98.4 %id)
R66973 placenta CARS2.s-u 1582 to 1973 399 to 2     Submitted on the opposite strand 398/402
(99 %)
0 diff
(100 %id)
AW082247 pooled CARS2.s-u 2418 to 2955 555 to 18   AAA   538/538
(100 %)
0 diff
(100 %id)
AW274658 pooled CARS2.s-u 2639 to 3117 480 to 1   tiling clone,   480/480
(100 %)
3 diff
(99.4 %id)
DB479877 hippocampus CARS2.t 1 to 507 1 to 513   tiling clone,   513/513
(100 %)
13 diff
(97.5 %id)
BI754933 brain CARS2.t 82 to 791 1 to 707 K121N Q123R E124R V125C F126S ... tiling clone,   707/714
(99 %)
4 diff
(99.5 %id)
TI_57218357   CARS2.t 82 to 791 28 to 734 K121N Q123R E124R V125C F126S ...     707/741
(95 %)
10 diff
(98.7 %id)
TI_151745605   CARS2.u 1 to 743 755 to 11 F25X A27P I28S I29S S30L ... tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 745/994
(74 %)
32 diff
(96.8 %id)
CA312383 Human Lung Epithelial cells, lung CARS2.u 67 to 750 702 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 684/684
(100 %)
0 diff
(100 %id)
TI_149273717   CARS2.u 227 to 746 602 to 84   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 519/999
(51 %)
6 diff
(99.4 %id)
BM968168 lung, Primary Lung Epithelial Cells CARS2.u 227 to 746 534 to 16   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 519/620
(83 %)
6 diff
(99.1 %id)
BF064111 colon, colon tumor, RER+ CARS2.u 240 to 745 507 to 2       506/507
(99 %)
0 diff
(100 %id)
DB280976.
matches multiple genes
uterus CARS2.va 1 to 276 2 to 278   tiling clone, capped also hits gene KPNA3 277/289
(95 %)
10 diff
(96.6 %id)
BX648882 salivary gland CARS2.va 44 to 4749 1 to 4705 L53P tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 4705/4705
(100 %)
15 diff
(99.7 %id)
BF339474 brain, glioblastoma with EGFR amplification CARS2.va 57 to 834 1 to 770       770/885
(87 %)
46 diff
(94.9 %id)
BX470841   CARS2.va 177 to 641 1 to 465   tiling clone,   465/468
(99 %)
1 diff
(99.8 %id)
DB277313 uterus CARS2.va 767 to 1300 2 to 535   tiling clone, capped   534/534
(100 %)
2 diff
(99.7 %id)
DA105692 cerebellum CARS2.va 956 to 1547 2 to 593   tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
DA312730 hippocampus CARS2.va 1837 to 2375 2 to 541   capped   540/540
(100 %)
3 diff
(99.5 %id)
AA317018 lung CARS2.va 2108 to 2289 1 to 181       181/181
(100 %)
2 diff
(98.9 %id)
BF527475 anaplastic oligodendroglioma with 1p/19qloss, brain CARS2.va 2173 to 2856 1 to 669   tiling clone,   669/691
(96 %)
21 diff
(97.0 %id)
AW363216 colon CARS2.va 2986 to 3171 196 to 13       184/206
(89 %)
0 diff
(100 %id)
AW590673 pooled germ cell tumors CARS2.va 3136 to 3678 543 to 1       543/543
(100 %)
2 diff
(99.7 %id)
BF109727 pooled CARS2.va 3137 to 3679 547 to 5   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 543/547
(99 %)
0 diff
(100 %id)
AW451683   CARS2.va 3143 to 3679 552 to 16   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 537/552
(97 %)
0 diff
(100 %id)
AI373178 B-cell, chronic lymphotic leukemia CARS2.va 3203 to 3673 470 to 1       470/470
(100 %)
4 diff
(99.2 %id)
AI860792 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors CARS2.va 3206 to 3673 469 to 1       469/469
(100 %)
3 diff
(99.4 %id)
AI361700 B-cell, chronic lymphotic leukemia CARS2.va 3212 to 3673 462 to 1   tiling clone,   462/462
(100 %)
0 diff
(100 %id)
BX114713 adenocarcinoma, Pancreas CARS2.va 3270 to 3679 415 to 8   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 408/415
(98 %)
0 diff
(100 %id)
AW444768   CARS2.va 3406 to 3679 283 to 10   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 274/283
(96 %)
0 diff
(100 %id)
AI432026 adenocarcinoma, Pancreas CARS2.va 3473 to 3672 198 to 1       198/198
(100 %)
1 diff
(99.5 %id)
BM709867 eye, optic nerve CARS2.va 3994 to 4576 1 to 583   fully sequenced, Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 583/583
(100 %)
1 diff
(99.9 %id)
DB352253 uterus CARS2.va 4186 to 4742 557 to 1       557/557
(100 %)
1 diff
(99.9 %id)
DB308571 hippocampus CARS2.va 4203 to 4742 541 to 1       541/541
(100 %)
1 diff
(99.9 %id)
BU734229 eye, optic nerve CARS2.va 4522 to 4742 239 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 221/221
(100 %)
0 diff
(100 %id)
AA007227 whole brain CARS2.vb 1 to 281 1 to 281   tiling clone,   281/341
(82 %)
1 diff
(99.8 %id)
BX649191 lymph node CARS2.vb 267 to 3011 25 to 2770 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 2746/2746
(100 %)
5 diff
(99.9 %id)
BM976365 lung, Primary Lung Cystic Fibrosis EpithelialCells CARS2.vb 715 to 1382 687 to 19   tiling clone, AAA   669/669
(100 %)
3 diff
(99.6 %id)
BP429819   CARS2.vb 870 to 1236 1 to 367       367/367
(100 %)
4 diff
(99.0 %id)
DB105515 thymus CARS2.vb 936 to 1499 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BF359863 marrow CARS2.vb 963 to 1320 357 to 1       357/357
(100 %)
4 diff
(98.9 %id)
AA551660 colon CARS2.vb 1057 to 1382 336 to 11   AAA   326/326
(100 %)
0 diff
(100 %id)
BG674416 skin CARS2.vb 1109 to 1998 1 to 891       891/892
(99 %)
23 diff
(97.5 %id)
BX952501   CARS2.vb 1238 to 1726 1 to 489   tiling clone,   489/489
(100 %)
1 diff
(99.8 %id)
AV689932 hepatocellular carcinoma CARS2.vb 1362 to 1717 1 to 351       351/352
(99 %)
3 diff
(99.2 %id)
AA312526   CARS2.vb 1472 to 1960 1 to 489       489/489
(100 %)
4 diff
(99.2 %id)
AA338427 brain CARS2.vb 1843 to 2221 1 to 379       379/382
(99 %)
6 diff
(98.5 %id)
AW966246   CARS2.vb 1844 to 2357 1 to 516       516/522
(98 %)
12 diff
(97.8 %id)
BF914471 uterus_tumor CARS2.vb 1950 to 2200 1 to 251       251/251
(100 %)
2 diff
(99.3 %id)
BM827516 Ascites, stomach CARS2.vb 1991 to 2462 1 to 472       472/472
(100 %)
0 diff
(100 %id)
AI619560 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus CARS2.vb 2049 to 2445 1 to 397     Submitted on the opposite strand 397/397
(100 %)
0 diff
(100 %id)
AW517562 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus CARS2.vb 2058 to 2366 1 to 310     Submitted on the opposite strand 310/311
(99 %)
12 diff
(96.2 %id)
BF931775 nervous_tumor CARS2.vb 2147 to 2452 317 to 10     Submitted on the opposite strand 308/317
(97 %)
0 diff
(100 %id)
DB342852 thymus CARS2.vb 2432 to 3011 581 to 1   tiling clone,   581/581
(100 %)
1 diff
(99.9 %id)
AW378768 head_neck CARS2.vb 2590 to 2718 1 to 126       126/126
(100 %)
4 diff
(96.9 %id)
AA007226 whole brain CARS2.vb 2780 to 3013 239 to 2   tiling clone,   236/280
(84 %)
6 diff
(97.9 %id)
BF001947 colon, colon tumor, RER+ CARS2.vc 1 to 480 442 to 11 E73T R74A Q75H P76G L77I ... tiling clone, AAA Suspected internal deletion, possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 432/432
(100 %)
0 diff
(100 %id)
BQ018130 Fibrosarcoma CARS2.vd 1 to 600 618 to 19 exact tiling clone, AAA   600/600
(100 %)
1 diff
(99.9 %id)
BF350439 head_neck CARS2.ve-u 1 to 494 17 to 507 W34C L53S W59C E73Q tiling clone,   491/520
(94 %)
11 diff
(97.9 %id)
DA253170 caudate nucleus CARS2.vf 1 to 573 2 to 574 exact tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
DW413798 Liver CARS2.vg 1 to 301 17 to 317 exact tiling clone,   301/318
(94 %)
8 diff
(97.5 %id)
TI_57233127   CARS2.vh 1 to 792 31 to 824 exact tiling clone,   794/824
(96 %)
11 diff
(98.7 %id)
BI906685 leukocyte CARS2.vh 6 to 792 1 to 789 exact tiling clone,   789/789
(100 %)
6 diff
(99.3 %id)
DA670850   CARS2.vh 48 to 635 2 to 589 exact tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
DA696720   CARS2.vi 1 to 574 2 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
AK092947 Spleen CARS2.vj 1 to 3224 8 to 3231 exact tiling clone, available from FLJ,   3225/3231
(99 %)
12 diff
(99.7 %id)
AX747821   CARS2.vj 1 to 3224 8 to 3231 exact     3225/3231
(99 %)
12 diff
(99.7 %id)
DA938077 Spleen CARS2.vj 1 to 588 2 to 589   capped   588/588
(100 %)
4 diff
(99.4 %id)
CD671946 eye, Iris CARS2.vj 305 to 869 1 to 565   tiling clone,   565/565
(100 %)
4 diff
(99.3 %id)
CR739687 Prostate CARS2.vj 519 to 721 1 to 203   tiling clone,   203/203
(100 %)
1 diff
(99.6 %id)
CR605547 Placenta Cot 25-normalized CARS2.vj 1980 to 3185 1 to 1206   tiling clone,   1206/1206
(100 %)
0 diff
(100 %id)
BX380330 Placenta Cot 25-normalized CARS2.vj 1980 to 2919 1 to 918       847/1116
(75 %)
40 diff
(96.5 %id)
BE670294 carcinoid, lung CARS2.vj 2303 to 2727 1 to 425     Submitted on the opposite strand 425/425
(100 %)
0 diff
(100 %id)
CD677580 eye, Trabecular meshwork CARS2.vj 2482 to 3048 1 to 567       567/567
(100 %)
4 diff
(99.3 %id)
BQ006407 Chondrosarcoma, Left Pelvis CARS2.vj 2487 to 3227 754 to 16 T128M AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 739/741
(99 %)
5 diff
(99.4 %id)
CB047094 2 pooled tumors (clear cell type), Kidney CARS2.vj 2542 to 3233 10 to 701 exact tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 692/701
(98 %)
6 diff
(99.2 %id)
TI_154106824   CARS2.vj 2609 to 3133 715 to 190       526/788
(66 %)
38 diff
(95.2 %id)
DB332974 Spleen CARS2.vj 2676 to 3224 551 to 1 C51X Y96V N97Q I98H H99P ...     551/551
(100 %)
3 diff
(99.5 %id)
BE672536 carcinoid, lung CARS2.vj 2721 to 3226 507 to 2 exact     506/507
(99 %)
0 diff
(100 %id)
CA444565 lung, Metastatic Chondrosarcoma CARS2.vj 2728 to 3224 515 to 19 exact AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 497/497
(100 %)
2 diff
(99.6 %id)
AI434818 Kidney CARS2.vj 2757 to 3226 470 to 1 exact     470/470
(100 %)
0 diff
(100 %id)
BE502778 carcinoid, lung CARS2.vj 2783 to 3226 445 to 2       444/445
(99 %)
0 diff
(100 %id)
AI478801 Kidney CARS2.vj 2787 to 3231 445 to 1       445/445
(100 %)
0 diff
(100 %id)
AI167312 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CARS2.vj 2794 to 3227 431 to 1       431/431
(100 %)
11 diff
(97.5 %id)
AA988815 carcinoid, lung CARS2.vj 2799 to 3226 428 to 2       427/428
(99 %)
2 diff
(99.6 %id)
CB047093 2 pooled tumors (clear cell type), Kidney CARS2.vj 3011 to 3233 250 to 28   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 223/223
(100 %)
0 diff
(100 %id)
BI027064 marrow CARS2.vk-u 1 to 354 357 to 1   tiling clone,   357/357
(100 %)
5 diff
(98.6 %id)
BM722349 eye, fetal eye CARS2.vk-u 33 to 687 1 to 655   tiling clone,   655/655
(100 %)
5 diff
(99.3 %id)
CX786668 human embryonic stem cells CARS2.vk-u 520 to 1268 1 to 749   tiling clone,   749/749
(100 %)
6 diff
(99.2 %id)
AW806242 uterus CARS2.vk-u 665 to 906 242 to 3       240/242
(99 %)
0 diff
(100 %id)
BX099323 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CARS2.vk-u 1168 to 1475 1 to 310   tiling clone,   310/310
(100 %)
3 diff
(99.1 %id)
AI378178 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CARS2.vk-u 1312 to 1655 344 to 1   tiling clone,   344/344
(100 %)
0 diff
(100 %id)
BE818607 breast_normal CARS2.vk-u 1321 to 1710 391 to 1   tiling clone,   391/392
(99 %)
13 diff
(96.7 %id)
BQ073062 leukocyte CARS2.vl 1 to 1017 9 to 1031 G51X G69S G82X Q97X D99E ... tiling clone,   1023/1083
(94 %)
54 diff
(95.1 %id)
BI909958 leukocyte CARS2.vl 91 to 692 1 to 607   tiling clone,   607/611
(99 %)
6 diff
(99.1 %id)
TI_57237054   CARS2.vl 91 to 692 69 to 675       607/679
(89 %)
12 diff
(98.3 %id)
BE855963 Prostate CARS2.vm-u 1 to 594 595 to 1 L37P D38* tiling clone,   595/595
(100 %)
1 diff
(99.9 %id)
AW139161   CARS2.vm-u 44 to 594 567 to 18 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 550/550
(100 %)
1 diff
(99.9 %id)
AI828623 Prostate CARS2.vm-u 112 to 594 483 to 1 exact     483/483
(100 %)
0 diff
(100 %id)
AI675466 Prostate CARS2.vm-u 136 to 594 459 to 1 exact     459/459
(100 %)
0 diff
(100 %id)
AI420850 Prostate CARS2.vm-u 172 to 594 423 to 1 exact     423/423
(100 %)
0 diff
(100 %id)
AA324116 brain, cerebellum CARS2.vn 1 to 222 1 to 221   tiling clone,   221/221
(100 %)
9 diff
(96.0 %id)
CB141319 Liver CARS2.vn 27 to 579 1 to 553 exact tiling clone,   553/553
(100 %)
0 diff
(100 %id)
DA080766 cerebellum CARS2.vo-u 1 to 577 2 to 578 exact tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
DB127842 thymus CARS2.vp 1 to 567 2 to 568 exact tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
AW754471 colon Gene CARS2, variant not shown         This clone was ignored    
AW867483 stomach_normal Gene CARS2, variant not shown              
DB299776 cerebellum Gene CARS2, variant not shown         This clone was ignored    
DA109432 cerebellum Gene CARS2, variant not shown       capped This clone was ignored    
DB300583 cerebellum Gene CARS2, variant not shown         This clone was ignored    
DA122582 cerebellum Gene CARS2, variant not shown       capped This clone was ignored    
AL603294 human skeletal muscle Gene CARS2, variant not shown              
AV684653 hepatocellular carcinoma Gene CARS2, variant not shown         Suspected internal deletion, this clone was ignored    
AV687735 hepatocellular carcinoma Gene CARS2, variant not shown         Suspected internal deletion, this clone was ignored    
DB355249 whole embryo, mainly head Gene CARS2, variant not shown         Suspected internal deletion, this clone was ignored    
AU117439 whole embryo, mainly head Gene CARS2, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI168090 senescent fibroblast Gene CARS2, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AI341009 adenocarcinoma, breast Gene CARS2, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BG179599 adenocarcinoma, cell line, Prostate Gene CARS2, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DC383420 Prostate Gene CARS2, variant not shown              
DB030831 testis Gene CARS2, variant not shown       capped      
DB052218 testis Gene CARS2, variant not shown       capped This clone was ignored    
DB338644 testis Gene CARS2, variant not shown         This clone was ignored    
DB148689 thymus Gene CARS2, variant not shown       capped This clone was ignored    
DB345946 thymus Gene CARS2, variant not shown         This clone was ignored    
TI_154105008   Gene CARS2, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CA446300 Chondrosarcoma, Left Pubic Bone Gene CARS2, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DB275399 uterus Gene CARS2, variant not shown       capped This clone was ignored    
DB352137 uterus Gene CARS2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r-u, .s-u, .t, .u, .va, .vb, .vc, .vd, .ve-u, .vf, .vg, .vh, .vi, .vj, .vk-u, .vl, .vm-u, .vn, .vo-u, .vp Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C