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Gene ANKRD55TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
74 supporting clones for gene ANKRD55 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK123389 corpus callosum .a 1 to 2164 2 to 2165 exact tiling clone, available from FLJ,   2165/2165
(100 %)
1 diff
(100.0 %id)
NM_024669.2   .a 1 to 2501 2 to 2502 exact RefSeq,   2502/2502
(100 %)
2 diff
(100.0 %id)
DA285937 corpus callosum .a 1 to 492 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA176421 amygdala .a 32 to 380 184 to 532   capped   349/531
(65 %)
7 diff
(98.7 %id)
DA292581 hippocampus .a 50 to 614 2 to 566   tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DA602821   .a 66 to 632 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AA351814 brain .a 123 to 402 1 to 281       281/281
(100 %)
3 diff
(99.0 %id)
AA351313 brain .a 124 to 523 1 to 403       403/403
(100 %)
4 diff
(99.1 %id)
DY655051 pooled .a 693 to 919 1 to 227       227/227
(100 %)
0 diff
(100 %id)
R14551 whole brain .a 840 to 1241 1 to 411       411/426
(96 %)
19 diff
(95.6 %id)
BY798426 eye .a 882 to 1525 1 to 645       645/645
(100 %)
2 diff
(99.7 %id)
BU853526 testis .a 1271 to 2032 1 to 767       767/774
(99 %)
14 diff
(98.2 %id)
BU854256 testis .a 1283 to 1997 1 to 725       725/776
(93 %)
18 diff
(97.7 %id)
TI_57170717   .a 1340 to 2277 58 to 995       938/1010
(92 %)
29 diff
(97.2 %id)
BI825655 brain, medulla .a 1348 to 2277 1 to 930       930/945
(98 %)
23 diff
(97.6 %id)
AA383109 testis .a 1362 to 1728 1 to 368       368/368
(100 %)
7 diff
(98.1 %id)
AW954060   .a 1362 to 1986 1 to 625       625/642
(97 %)
22 diff
(96.6 %id)
DB070567 testis .a 1512 to 2047 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
AW072386 pooled .a 1660 to 2166 509 to 3       507/509
(99 %)
0 diff
(100 %id)
AA812525   .a 1719 to 2164 457 to 12   AAA   446/446
(100 %)
1 diff
(99.8 %id)
AA883109 pooled .a 1724 to 2178 459 to 6       454/459
(98 %)
1 diff
(99.8 %id)
AW468878 pooled .a 1764 to 2178 420 to 6       415/420
(98 %)
0 diff
(100 %id)
AA884300 pooled .a 1772 to 2176 406 to 2       405/406
(99 %)
0 diff
(100 %id)
BG186279   .a 1776 to 2258 1 to 483   AAA   483/483
(100 %)
8 diff
(98.4 %id)
BG189426   .a 1776 to 2279 1 to 504       503/818
(61 %)
11 diff
(98.7 %id)
BG192024   .a 1776 to 1968 1 to 192       193/192
(100 %)
10 diff
(94.8 %id)
BG203781   .a 1776 to 2258 1 to 482   AAA   480/482
(99 %)
7 diff
(98.6 %id)
BG208529   .a 1776 to 2384 1 to 610   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 610/610
(100 %)
4 diff
(99.4 %id)
BG208530   .a 1776 to 2168 1 to 393   AAA   392/393
(99 %)
4 diff
(99.0 %id)
BG209062   .a 1776 to 2266 1 to 490       489/490
(99 %)
26 diff
(94.7 %id)
BG213257   .a 1776 to 2260 1 to 486   AAA   486/486
(100 %)
16 diff
(96.8 %id)
BG214362   .a 1776 to 2267 1 to 492   AAA   492/492
(100 %)
13 diff
(97.4 %id)
BG216347   .a 1776 to 2258 1 to 484   AAA   484/484
(100 %)
12 diff
(97.6 %id)
BG220051   .a 1776 to 2172 1 to 398   AAA   398/398
(100 %)
6 diff
(98.5 %id)
BG200214   .a 1777 to 2258 1 to 483   AAA   483/483
(100 %)
4 diff
(99.2 %id)
BG209063   .a 1777 to 2441 1 to 666       666/671
(99 %)
33 diff
(95.1 %id)
BG220538   .a 1777 to 2498 1 to 723   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 723/723
(100 %)
9 diff
(98.8 %id)
BG185219   .a 1778 to 2498 1 to 722   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 722/722
(100 %)
9 diff
(98.8 %id)
BG195093   .a 1778 to 2499 1 to 732       732/831
(88 %)
36 diff
(95.7 %id)
BG209061   .a 1778 to 2498 1 to 721   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 721/721
(100 %)
6 diff
(99.2 %id)
BG215966   .a 1778 to 2492 1 to 716   AAA   716/722
(99 %)
14 diff
(98.1 %id)
BG221499   .a 1778 to 2498 1 to 722   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 722/722
(100 %)
9 diff
(98.8 %id)
BG221500   .a 1778 to 2255 1 to 479   AAA   479/479
(100 %)
2 diff
(99.6 %id)
BG195094   .a 1779 to 2085 1 to 307       307/307
(100 %)
5 diff
(98.4 %id)
BG199688   .a 1779 to 2163 1 to 386       386/389
(99 %)
5 diff
(98.8 %id)
BG206444   .a 1779 to 2161 1 to 384       384/389
(98 %)
4 diff
(99.0 %id)
BG210089   .a 1781 to 2397 53 to 668       619/861
(71 %)
33 diff
(96.2 %id)
BG198636   .a 1788 to 2496 1 to 711   AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 711/711
(100 %)
6 diff
(99.2 %id)
BG215968   .a 1789 to 2258 14 to 484   AAA   471/484
(97 %)
10 diff
(98.0 %id)
BG192530   .a 1792 to 2308 1 to 521       521/827
(62 %)
33 diff
(96.1 %id)
BG183103   .a 1795 to 2074 1 to 279       279/279
(100 %)
2 diff
(99.3 %id)
BG206445   .a 1825 to 2169 1 to 346   AAA   346/346
(100 %)
5 diff
(98.6 %id)
C21231   .a 1865 to 2175 1 to 311       311/311
(100 %)
0 diff
(100 %id)
BG184156   .a 1872 to 2512 1 to 642   tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 642/642
(100 %)
9 diff
(98.6 %id)
AA459693   .a 1886 to 2172 287 to 1       287/287
(100 %)
0 diff
(100 %id)
BX100727 whole brain .a 1964 to 2258 309 to 15   AAA   295/300
(98 %)
1 diff
(99.7 %id)
AA383108 testis .a 2022 to 2174 153 to 1       153/153
(100 %)
0 diff
(100 %id)
AW269928 pooled .a 2071 to 2499 431 to 3   tiling clone,   429/431
(99 %)
0 diff
(100 %id)
AA905074 pooled .a 2116 to 2497 389 to 8       382/389
(98 %)
0 diff
(100 %id)
AA351312 brain .a 2166 to 2410 245 to 1       245/245
(100 %)
0 diff
(100 %id)
BX952891   .b 1 to 637 3 to 639   tiling clone, Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 639/639
(100 %)
1 diff
(99.9 %id)
BX952892   .b 1744 to 2342 621 to 23   tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 599/599
(100 %)
0 diff
(100 %id)
BC106914 PCR rescued clones .c 1 to 1518 1 to 1518 exact tiling clone,   1518/1518
(100 %)
0 diff
(100 %id)
BC106915 PCR rescued clones .c 1 to 1518 1 to 1518 V57M     1518/1518
(100 %)
2 diff
(99.9 %id)
DA691034   .d 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
BP203496 coronary artery .e 1 to 563 1 to 565 L19X F20L V21C P22S K23* tiling clone,   565/565
(100 %)
5 diff
(99.2 %id)
BF509000   .f 1 to 690 706 to 18 G28E A29P N30I I31L N32T ... tiling clone, AAA   689/689
(100 %)
1 diff
(99.9 %id)
BF594106 brain, glioblastoma (pooled) .f 227 to 684 458 to 1       458/458
(100 %)
1 diff
(99.8 %id)
AI420680 brain, glioblastoma (pooled) .f 276 to 684 408 to 1       408/408
(100 %)
1 diff
(99.8 %id)
CD705406 normal nasopharynx .g 1 to 353 22 to 376 L20T H21P Y22L A23* tiling clone,   355/376
(94 %)
6 diff
(98.5 %id)
CR992791 T-Lymphocytes .h 1 to 854 1 to 856 R117K R118E T119D P120X Q121S ... tiling clone,   856/856
(100 %)
5 diff
(99.5 %id)
BG183686   .i-u 1 to 519 1 to 519 exact tiling clone,   519/770
(67 %)
2 diff
(99.8 %id)
AK021857 whole embryo, mainly head Gene ANKRD55, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AU145889 whole embryo, mainly head Gene ANKRD55, variant not shown         Suspected internal deletion, this clone was ignored    
AU119582 whole embryo, mainly head Gene ANKRD55, variant not shown       capped Suspected internal deletion, this clone was ignored    
R14982 whole brain Gene ANKRD55, variant not shown         This clone was ignored    
R45673 whole brain Gene ANKRD55, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C