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Gene SLC38A7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
414 supporting clones for gene SLC38A7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF194962 fibrotheoma, ovary .a 1 to 482 481 to 1   tiling clone,   481/481
(100 %)
2 diff
(99.6 %id)
DC319412 brain .a 75 to 649 1 to 575   tiling clone,   575/575
(100 %)
4 diff
(99.4 %id)
DC403128 testis .a 170 to 718 1 to 551       551/551
(100 %)
3 diff
(99.5 %id)
AK001677   .a 505 to 3277 1 to 2773 exact tiling clone, available from FLJ,   2773/2773
(100 %)
4 diff
(99.9 %id)
BP243405 Liver .a 505 to 1086 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
NM_018231.1   .a 505 to 3277 1 to 2773 exact RefSeq,   2773/2773
(100 %)
4 diff
(99.9 %id)
BP330085 rectum .a 505 to 1093 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
BM785620 Ascites, stomach .a 505 to 1131 1 to 628       628/628
(100 %)
2 diff
(99.7 %id)
AU280700   .a 505 to 1067 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DA019636   .a 506 to 1079 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA147885 amygdala .a 506 to 1075 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA334260 hippocampus .a 506 to 1051 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA419401 cord Blood .a 506 to 1060 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA489816 brain .a 506 to 1071 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA490044 brain .a 506 to 1023 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA524507 brain .a 506 to 1062 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA575166   .a 506 to 1041 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DA598467   .a 506 to 1041 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DA629679 Kidney .a 506 to 1051 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA630094 Kidney .a 506 to 1061 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA659607   .a 506 to 1063 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA664413   .a 506 to 1253 2 to 749   capped   748/748
(100 %)
5 diff
(99.4 %id)
DA668189 esophagus .a 506 to 1051 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA683681   .a 506 to 1027 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA706230   .a 506 to 1051 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA710573   .a 506 to 1058 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
AU130076   .a 506 to 1349 2 to 845   capped   844/844
(100 %)
9 diff
(99.0 %id)
AU132967   .a 506 to 1331 2 to 825   capped   824/826
(99 %)
8 diff
(99.1 %id)
AU133177   .a 506 to 1373 2 to 866   capped   865/866
(99 %)
10 diff
(98.9 %id)
DA742087   .a 506 to 1023 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA769221 brain .a 506 to 977 2 to 473   capped   472/472
(100 %)
2 diff
(99.6 %id)
DA773450 brain .a 506 to 1079 2 to 575   capped   574/578
(99 %)
1 diff
(99.9 %id)
DA779312 brain .a 506 to 1079 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA784863 brain .a 506 to 1094 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA787781 brain .a 506 to 1051 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA885170   .a 506 to 1065 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA885295   .a 506 to 1065 2 to 561   capped   560/561
(99 %)
1 diff
(99.9 %id)
DA939111 Spleen .a 506 to 977 2 to 474   capped   473/473
(100 %)
1 diff
(99.8 %id)
DA966407 stomach .a 506 to 1001 2 to 497   capped   496/496
(100 %)
1 diff
(99.8 %id)
DA991007 synovial membrane tissue from rheumatioidarthritis .a 506 to 1035 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DB010148 colon, tumor tissue .a 506 to 807 2 to 303   capped   302/302
(100 %)
0 diff
(100 %id)
DB035031 testis .a 506 to 1055 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB060170 testis .a 506 to 1052 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB132808 thymus .a 506 to 1046 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DB181934 liver, tumor tissue .a 506 to 1051 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB189392 lung, tumor tissue .a 506 to 1059 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB253997 uterus .a 506 to 1023 2 to 519   capped   518/518
(100 %)
3 diff
(99.5 %id)
AU143242   .a 506 to 1264 2 to 762   capped   761/761
(100 %)
7 diff
(99.1 %id)
DA501241 brain .a 508 to 1041 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA662820   .a 508 to 1040 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA744832   .a 508 to 1079 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA057156 cerebellum .a 510 to 1113 2 to 605   capped   604/604
(100 %)
1 diff
(99.9 %id)
DA076687 cerebellum .a 510 to 1086 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA467699 cord Blood .a 510 to 1083 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA701759   .a 510 to 1065 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA705903   .a 510 to 1060 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA791459 brain .a 510 to 1041 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA848396 placenta .a 510 to 1096 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DB080936 testis .a 510 to 1082 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB122612 thymus .a 510 to 1041 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA648532   .a 515 to 1056 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA795579 brain .a 515 to 1063 2 to 554   capped   553/558
(99 %)
5 diff
(99.2 %id)
DB072767 testis .a 515 to 1053 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA029326   .a 521 to 1086 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA264861 caudate nucleus .a 521 to 1086 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA337737 hippocampus .a 521 to 1092 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA418378 thalamus .a 521 to 1072 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA439925 tongue, tumor tissue .a 521 to 1099 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA464013   .a 521 to 1070 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA523890 brain .a 521 to 1090 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA545683   .a 521 to 1084 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA739063   .a 522 to 1071 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA526916 brain .a 523 to 1041 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
DA776034 brain .a 523 to 1088 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA661199   .a 525 to 1093 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA776464 brain .a 527 to 1107 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA050885   .a 529 to 1102 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
BX489412   .a 529 to 997 1 to 469       469/469
(100 %)
2 diff
(99.6 %id)
DA796913 brain .a 530 to 1075 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA122513 cerebellum .a 531 to 1093 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA294729 hippocampus .a 531 to 1082 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA437864 tongue, tumor tissue .a 531 to 1092 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA442934 tongue, tumor tissue .a 531 to 1103 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA465252   .a 531 to 993 2 to 464   capped   463/472
(98 %)
1 diff
(99.8 %id)
DA481862   .a 531 to 1103 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA715109   .a 531 to 1051 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
DA740510   .a 531 to 1042 2 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
DA768681 brain .a 531 to 1047 2 to 518   capped   517/517
(100 %)
2 diff
(99.7 %id)
BX482607   .a 532 to 1213 1 to 682       682/682
(100 %)
3 diff
(99.6 %id)
BX956232   .a 532 to 1167 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
DA648078   .a 532 to 1073 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA029791   .a 533 to 1097 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA074705 cerebellum .a 533 to 1096 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA150791 amygdala .a 533 to 1099 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA202811 brain .a 533 to 1109 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA203561 brain .a 533 to 1106 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA299467 hippocampus .a 533 to 1105 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA321459 hippocampus .a 533 to 1023 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA434302 tongue, tumor tissue .a 533 to 1021 2 to 490   capped   489/489
(100 %)
0 diff
(100 %id)
DA441233 tongue, tumor tissue .a 533 to 1118 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA441833 tongue, tumor tissue .a 533 to 1090 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA511562 brain .a 533 to 1112 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA518886 brain .a 533 to 1095 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA523746 brain .a 533 to 1098 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA577890   .a 533 to 1101 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA690876   .a 533 to 1098 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA710892   .a 533 to 1082 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA729311   .a 533 to 1348 2 to 812   capped   811/814
(99 %)
10 diff
(98.8 %id)
DA729587   .a 533 to 1067 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
AU126657   .a 533 to 984 2 to 453   capped   452/455
(99 %)
5 diff
(99.0 %id)
DA739371   .a 533 to 1051 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA768697 brain .a 533 to 1047 2 to 516   capped   515/515
(100 %)
1 diff
(99.9 %id)
DA773114 brain .a 533 to 1120 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA779911 brain .a 533 to 1097 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA781331 brain .a 533 to 1099 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA846512 placenta .a 533 to 1086 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA881333   .a 533 to 1099 2 to 569   capped   568/568
(100 %)
4 diff
(99.3 %id)
DB044568 testis .a 533 to 1071 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB046388 testis .a 533 to 1110 2 to 579   capped   578/579
(99 %)
2 diff
(99.7 %id)
DB109637 thymus .a 533 to 1113 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB189341 lung, tumor tissue .a 533 to 1087 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB264063 uterus .a 533 to 1126 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
BX504712   .a 535 to 1073 1 to 540       540/541
(99 %)
3 diff
(99.5 %id)
AK222932 Kidney .a 536 to 2312 1 to 1777 V208A     1777/1777
(100 %)
1 diff
(100.0 %id)
BP256325 Kidney .a 536 to 1117 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA312832 hippocampus .a 537 to 1116 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA318181 hippocampus .a 537 to 1051 2 to 516   capped   515/515
(100 %)
1 diff
(99.9 %id)
DB174034 kidney, tumor tissue .a 537 to 1100 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA479789   .a 538 to 1086 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DR761767 embryonic stem .a 538 to 1313 1 to 776       776/776
(100 %)
2 diff
(99.8 %id)
DA452711 tongue, tumor tissue .a 539 to 903 2 to 366   capped   365/365
(100 %)
0 diff
(100 %id)
DA885053   .a 539 to 1076 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BG339119 leiomyosarcoma cell line, uterus .a 541 to 1361 1 to 820       820/1197
(68 %)
23 diff
(98.1 %id)
DA021848   .a 542 to 1106 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
BG339670 leiomyosarcoma cell line, uterus .a 542 to 1296 1 to 757       712/759
(93 %)
19 diff
(97.5 %id)
DA658228   .a 542 to 1098 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA886289   .a 542 to 1092 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA476307   .a 543 to 1099 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA109562 cerebellum .a 544 to 1092 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA391068 thalamus .a 544 to 1118 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA436361 tongue, tumor tissue .a 544 to 1123 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
AL709157 human skeletal muscle .a 544 to 1240 1 to 698       698/701
(99 %)
2 diff
(99.8 %id)
DA510449 brain .a 544 to 1113 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA026798   .a 546 to 1112 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA659750   .a 546 to 1041 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
DA296165 hippocampus .a 547 to 1112 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BI907474 leukocyte .a 547 to 1399 1 to 861       861/861
(100 %)
23 diff
(97.4 %id)
AL133675 amygdala .a 548 to 1202 1 to 653       653/654
(99 %)
6 diff
(99.1 %id)
BF313012 brain, neuroblastoma .a 548 to 1061 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
BC001961 Brain, neuroblastoma .a 549 to 3277 1 to 2729 exact available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 2729/2729
(100 %)
4 diff
(99.9 %id)
DA528067 brain .a 549 to 1166 2 to 619   capped   618/618
(100 %)
4 diff
(99.4 %id)
BM450883 eye, retinoblastoma .a 549 to 1144 1 to 599       599/745
(80 %)
12 diff
(98.4 %id)
DA024361   .a 550 to 1111 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA544779   .a 550 to 1112 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA576452   .a 550 to 1103 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP383022 ilea mucosa .a 550 to 1168 1 to 619       619/666
(92 %)
10 diff
(98.5 %id)
DA678516   .a 550 to 1111 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA699721   .a 550 to 1071 3 to 524   capped   522/523
(99 %)
0 diff
(100 %id)
DA773482 brain .a 550 to 1128 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA784267 brain .a 550 to 1126 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BE259166 eye, retinoblastoma .a 551 to 1208 27 to 683       657/687
(95 %)
3 diff
(99.6 %id)
BE262437 brain, neuroblastoma .a 551 to 1400 31 to 884       861/894
(96 %)
22 diff
(97.6 %id)
CN423697 embryonic stem cells, DMSO-treated H9 cellline .a 552 to 1213 6 to 667       662/667
(99 %)
0 diff
(100 %id)
BX427568 fetal liver, Liver .a 552 to 1492 2 to 934       933/949
(98 %)
12 diff
(98.8 %id)
BE259149 eye, retinoblastoma .a 552 to 1153 25 to 627       603/627
(96 %)
7 diff
(98.9 %id)
BU183475 melanotic melanoma, skin .a 552 to 1357 1 to 819       819/878
(93 %)
16 diff
(98.2 %id)
TI_57232462   .a 552 to 1399 41 to 896       860/896
(95 %)
28 diff
(96.9 %id)
BG425132 Kidney, renal cell adenocarcinoma .a 553 to 1325 1 to 771       771/887
(86 %)
19 diff
(97.9 %id)
BI523972 pooled lung and spleen .a 553 to 1277 1 to 731       730/731
(99 %)
10 diff
(98.7 %id)
BI772578 pooled lung and spleen .a 553 to 1257 1 to 721       724/721
(100 %)
48 diff
(93.4 %id)
TI_57177680   .a 553 to 1257 1 to 721       724/721
(100 %)
48 diff
(93.4 %id)
BU542349 carcinoma, cell line, Prostate .a 555 to 1409 1 to 860       860/901
(95 %)
9 diff
(99.1 %id)
AL550640 placenta, Placenta Cot 25-normalized .a 556 to 1513 1 to 956       956/958
(99 %)
13 diff
(98.7 %id)
TI_44159723   .a 556 to 1277 36 to 764       732/764
(95 %)
11 diff
(98.6 %id)
DA658827   .a 569 to 1135 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DN995349 breast cancer, Mammary gland (cancer tissue) .a 574 to 1124 1 to 551       551/551
(100 %)
6 diff
(99.0 %id)
DA820530 pericardium .a 593 to 1112 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
BM048115 carcinoma, cell line, Prostate .a 636 to 1175 105 to 642       538/747
(72 %)
21 diff
(97.2 %id)
BP269269 thyroid .a 657 to 1241 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP269988 thyroid .a 657 to 1238 1 to 580       580/580
(100 %)
4 diff
(99.4 %id)
DA705583   .a 657 to 1126 2 to 471   capped   470/470
(100 %)
0 diff
(100 %id)
DA501496 brain .a 660 to 1216 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB034248 testis .a 660 to 1239 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BP252518 Kidney .a 793 to 1376 1 to 584       584/584
(100 %)
0 diff
(100 %id)
TI_1948080221   .a 897 to 1652 137 to 891   fully sequenced,   755/891
(84 %)
14 diff
(98.5 %id)
TI_1948080393   .a 897 to 1729 138 to 977       840/1327
(63 %)
28 diff
(97.9 %id)
TI_1948080560   .a 897 to 1638 144 to 886   fully sequenced,   743/886
(83 %)
7 diff
(99.3 %id)
TI_1948080735   .a 897 to 1678 132 to 914       783/1360
(57 %)
16 diff
(98.9 %id)
CR457236   .a 898 to 2286 1 to 1389 exact     1389/1389
(100 %)
1 diff
(100.0 %id)
CV025830 mixed .a 898 to 1533 1 to 636       636/636
(100 %)
0 diff
(100 %id)
AU125937   .a 899 to 1662 2 to 765   capped   762/769
(99 %)
8 diff
(99.0 %id)
CA393615 eye, RPE/choroid .a 928 to 1357 1 to 430       430/430
(100 %)
0 diff
(100 %id)
DA466644 cord Blood .a 1076 to 1615 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA698566   .a 1076 to 1606 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
CK819557 Islets of Langerhans, Pancreas .a 1175 to 1716 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
BM129545 Islets of Langerhans, Pancreas .a 1191 to 1738 1 to 548       548/548
(100 %)
2 diff
(99.7 %id)
BU845663 ovary, teratocarcinoma, cell line .a 1290 to 2002 1 to 720       720/922
(78 %)
12 diff
(98.7 %id)
DA983563 synovial membrane tissue from rheumatioidarthritis .a 1315 to 1859 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
BM928738 hepatocellular carcinoma, cell line, Liver .a 1326 to 2103 1 to 794       794/954
(83 %)
36 diff
(96.3 %id)
BQ650774 hepatocellular carcinoma, cell line, Liver .a 1326 to 2002 1 to 678       678/922
(73 %)
11 diff
(98.9 %id)
BP305719   .a 1340 to 1909 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
BG105336 adrenal cortex carcinoma, cell line, adrenal gland .a 1357 to 2106 5 to 763       759/1142
(66 %)
36 diff
(96.9 %id)
CX781174 human embryonic stem cells .a 1392 to 2165 1 to 774       774/774
(100 %)
4 diff
(99.5 %id)
CD514177 White Matter .a 1457 to 2181 26 to 752       727/942
(77 %)
14 diff
(98.6 %id)
CD556705 brain, Pituitary .a 1459 to 2079 1 to 626       626/1076
(58 %)
17 diff
(98.5 %id)
BU553263 ovary, teratocarcinoma, cell line .a 1565 to 2182 20 to 636       617/882
(69 %)
9 diff
(99.0 %id)
TI_1948080561   .a 1577 to 2295 834 to 115   fully sequenced,   720/834
(86 %)
2 diff
(99.8 %id)
BU552779 ovary, teratocarcinoma, cell line .a 1578 to 2466 1 to 895       895/895
(100 %)
12 diff
(98.7 %id)
BU554010 ovary, teratocarcinoma, cell line .a 1578 to 2140 1 to 565       565/1334
(42 %)
18 diff
(98.7 %id)
BU848717 ovary, teratocarcinoma, cell line .a 1578 to 2484 1 to 917       917/921
(99 %)
14 diff
(98.5 %id)
BU848841 ovary, teratocarcinoma, cell line .a 1578 to 2467 1 to 900       900/915
(98 %)
10 diff
(99.0 %id)
BU849255 ovary, teratocarcinoma, cell line .a 1578 to 2466 1 to 902       902/912
(98 %)
15 diff
(98.4 %id)
BU856351 ovary, teratocarcinoma, cell line .a 1578 to 2473 1 to 907       907/907
(100 %)
14 diff
(98.5 %id)
BM044288 carcinoma, cell line, Prostate .a 1601 to 2464 1 to 872       872/874
(99 %)
22 diff
(97.5 %id)
BM044444 carcinoma, cell line, Prostate .a 1601 to 2397 1 to 794       794/795
(99 %)
8 diff
(99.0 %id)
BM048908 carcinoma, cell line, Prostate .a 1601 to 2323 1 to 728       728/728
(100 %)
12 diff
(98.4 %id)
TI_1948080222   .a 1622 to 2289 788 to 121   fully sequenced,   668/788
(84 %)
5 diff
(99.4 %id)
BI193116 epithelioid carcinoma cell line, Pancreas .a 1649 to 2380 1 to 731       731/731
(100 %)
5 diff
(99.4 %id)
TI_1948080736   .a 1663 to 2289 748 to 118       629/1344
(46 %)
21 diff
(98.5 %id)
BP304652   .a 1665 to 2214 1 to 550       550/554
(99 %)
6 diff
(99.0 %id)
BU501439 eye, normal pigmented retinal epithelium .a 1744 to 2658 1 to 918       918/918
(100 %)
6 diff
(99.4 %id)
BG284829 adenocarcinoma, cell line, Prostate .a 1775 to 2479 36 to 741       712/741
(96 %)
16 diff
(97.9 %id)
BG331638 large cell carcinoma, lung .a 1824 to 2550 1 to 717       717/954
(75 %)
26 diff
(97.3 %id)
BF921687 nervous_tumor .a 1842 to 2215 374 to 1     Submitted on the opposite strand 374/374
(100 %)
16 diff
(95.8 %id)
BQ434952 melanotic melanoma, skin .a 1994 to 2870 1 to 885       885/889
(99 %)
14 diff
(98.5 %id)
CD629083   .a 2063 to 2800 18 to 751       734/760
(96 %)
15 diff
(98.1 %id)
BG281277 melanotic melanoma, skin .a 2114 to 3064 1 to 962       962/976
(98 %)
62 diff
(93.7 %id)
BU176289 epithelioid carcinoma, Pancreas .a 2125 to 2888 1 to 778       778/782
(99 %)
19 diff
(97.6 %id)
TI_154098276   .a 2126 to 2882 877 to 121   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 757/1099
(68 %)
44 diff
(96.0 %id)
AL574447 placenta, Placenta Cot 25-normalized .a 2215 to 3219 1004 to 1       1004/1007
(99 %)
6 diff
(99.5 %id)
AA378985 synovial membrane .a 2277 to 2599 1 to 324       324/328
(98 %)
3 diff
(99.1 %id)
AI016927   .a 2307 to 2611 305 to 1       305/305
(100 %)
1 diff
(99.7 %id)
BX419357 brain, fetal brain .a 2312 to 3225 909 to 1       909/917
(99 %)
48 diff
(94.8 %id)
BF346821 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2378 to 3162 41 to 837       797/972
(81 %)
6 diff
(99.4 %id)
AA302139 aorta .a 2392 to 2653 1 to 268       268/268
(100 %)
6 diff
(97.8 %id)
AW957993   .a 2393 to 3018 1 to 623       623/626
(99 %)
14 diff
(97.8 %id)
AA280769 germinal center B cell .a 2395 to 2801 1 to 407       407/407
(100 %)
5 diff
(98.8 %id)
BE718711 head_neck .a 2512 to 2746 1 to 236       236/236
(100 %)
13 diff
(94.5 %id)
BP428676   .a 2532 to 2857 1 to 326       326/326
(100 %)
5 diff
(98.5 %id)
BP428782   .a 2532 to 2904 1 to 373       373/373
(100 %)
5 diff
(98.7 %id)
BP431289   .a 2532 to 2888 1 to 357       357/357
(100 %)
5 diff
(98.6 %id)
BP349874 brain .a 2550 to 3133 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BP349891 brain .a 2550 to 3126 1 to 578       578/582
(99 %)
9 diff
(98.5 %id)
AI963454 adenocarcinoma, Pancreas .a 2560 to 3284 722 to 1       722/750
(96 %)
25 diff
(96.7 %id)
EH316837   .a 2561 to 2621 1 to 61       61/61
(100 %)
1 diff
(98.4 %id)
CA450436 Human Lung Epithelial cells, lung .a 2568 to 3293 726 to 1   tiling clone,   726/726
(100 %)
0 diff
(100 %id)
CA425812 cell lines, Chondrosarcoma .a 2570 to 3291 720 to 1       720/720
(100 %)
3 diff
(99.6 %id)
TI_149295052   .a 2609 to 3303 742 to 48       695/1031
(67 %)
0 diff
(100 %id)
BU683557 lung .a 2615 to 3293 679 to 1       679/684
(99 %)
2 diff
(99.8 %id)
AL133676 amygdala .a 2634 to 3295 661 to 1       661/663
(99 %)
8 diff
(98.8 %id)
CN423698 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2668 to 3277 654 to 45   AAA Submitted on the opposite strand 610/610
(100 %)
5 diff
(99.2 %id)
AA528018 breast .a 2676 to 3277 601 to 1       601/601
(100 %)
6 diff
(99.1 %id)
CD629082   .a 2686 to 3277 587 to 2       586/587
(99 %)
0 diff
(100 %id)
AW803081 uterus .a 2695 to 2956 263 to 3       261/263
(99 %)
0 diff
(100 %id)
AU154392   .a 2698 to 3277 578 to 1       578/580
(99 %)
8 diff
(98.7 %id)
AU154557   .a 2728 to 3277 551 to 1       551/553
(99 %)
10 diff
(98.2 %id)
AU149498   .a 2742 to 3277 537 to 1       537/540
(99 %)
19 diff
(96.5 %id)
BQ023796 placenta .a 2746 to 3293 548 to 1       548/548
(100 %)
2 diff
(99.7 %id)
BP394816 pancreatic islet .a 2752 to 3250 1 to 499     Submitted on the opposite strand 499/499
(100 %)
1 diff
(99.8 %id)
DB367347   .a 2759 to 3277 517 to 1       517/541
(95 %)
12 diff
(97.8 %id)
DB384563   .a 2762 to 3277 515 to 1       515/546
(94 %)
8 diff
(98.6 %id)
BG286223 bladder, transitional cell papilloma, cell line .a 2767 to 3298 1 to 535       535/536
(99 %)
5 diff
(99.1 %id)
CX781106 human embryonic stem cells .a 2768 to 3299 535 to 1   tiling clone,   535/535
(100 %)
13 diff
(97.6 %id)
CN423695 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2769 to 3277 1 to 509   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 509/509
(100 %)
1 diff
(99.9 %id)
AA829924 carcinoid, lung .a 2792 to 3279 487 to 1       487/487
(100 %)
3 diff
(99.4 %id)
AJ708086 heart .a 2795 to 3280 14 to 498       485/498
(97 %)
6 diff
(98.8 %id)
BM129286 Islets of Langerhans, Pancreas .a 2804 to 3284 481 to 1       481/481
(100 %)
2 diff
(99.6 %id)
AA905628 pooled .a 2813 to 3280 468 to 1       468/468
(100 %)
0 diff
(100 %id)
DB321960   .a 2819 to 3277 459 to 1       459/459
(100 %)
3 diff
(99.4 %id)
AA587671 adrenal adenoma, adrenal gland .a 2822 to 3277 456 to 1       456/456
(100 %)
3 diff
(99.4 %id)
AI554737 anaplastic oligodendroglioma, brain .a 2832 to 3277 445 to 1       445/447
(99 %)
7 diff
(98.5 %id)
CK819556 Islets of Langerhans, Pancreas .a 2834 to 3284 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
AI565535 anaplastic oligodendroglioma, brain .a 2852 to 3277 426 to 1       426/426
(100 %)
2 diff
(99.6 %id)
AW238235 carcinoma in situ from retromolar trigone .a 2866 to 3277 436 to 24   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 413/413
(100 %)
2 diff
(99.6 %id)
AI560678 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2869 to 3278 410 to 1       410/410
(100 %)
1 diff
(99.8 %id)
AW005276 thymus, pooled .a 2869 to 3278 410 to 1       410/410
(100 %)
4 diff
(99.1 %id)
AW273259 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2871 to 3282 414 to 1       414/414
(100 %)
3 diff
(99.3 %id)
AA036985 uterus .a 2872 to 3083 1 to 212       212/214
(99 %)
3 diff
(98.6 %id)
AI348491 carcinoid, lung .a 2878 to 3279 402 to 1       402/402
(100 %)
2 diff
(99.6 %id)
AA229066   .a 2886 to 3277 388 to 1       388/399
(97 %)
7 diff
(98.3 %id)
AA281475 germinal center B cell .a 2888 to 3277 390 to 1       390/390
(100 %)
2 diff
(99.5 %id)
BX107521 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2912 to 3291 380 to 1     Submitted on the opposite strand 380/380
(100 %)
1 diff
(99.8 %id)
AI291062 carcinoid, lung .a 2919 to 3287 369 to 1       369/369
(100 %)
3 diff
(99.2 %id)
BF732585 fibrotheoma, ovary .a 2922 to 3277 356 to 1       356/356
(100 %)
3 diff
(99.2 %id)
T59153 fetal spleen, Spleen .a 2930 to 3272 358 to 11       348/363
(95 %)
0 diff
(100 %id)
AI867033 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2934 to 3282 349 to 1       349/349
(100 %)
2 diff
(99.5 %id)
F19378 pectoral muscle (after mastectomy) .a 3015 to 3181 1 to 167       167/168
(99 %)
1 diff
(99.5 %id)
AI807040 pooled .a 3019 to 3280 262 to 1       262/262
(100 %)
2 diff
(99.3 %id)
AW263575 lung, two pooled squamous cell carcinomas .a 3040 to 3284 245 to 1       245/245
(100 %)
2 diff
(99.2 %id)
AA706123 uterus .a 3088 to 3277 190 to 1       190/190
(100 %)
3 diff
(98.5 %id)
BI007144 kidney_tumor .a 3118 to 3243 129 to 2       128/133
(96 %)
0 diff
(100 %id)
AK299424 tongue .b 1 to 1437 1 to 1437 F166L L211P tiling clone,   1437/1437
(100 %)
3 diff
(99.8 %id)
DC373412 tongue .b 1 to 579 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DA713926   .c 1 to 566 5 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA784710 brain .c 1 to 573 5 to 577   capped   576/577
(99 %)
2 diff
(99.7 %id)
DA857081 placenta .c 1 to 550 5 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DB067168 testis .c 1 to 535 5 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DA758699   .c 1 to 546 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA723537   .c 4 to 579 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DA118542 cerebellum .c 5 to 533 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA185304 amygdala .c 5 to 564 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BC063399 Brain, adult, 6 pooled whole brains .c 16 to 2860 1 to 2845 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 2845/2845
(100 %)
2 diff
(100.0 %id)
BI752368 brain .c 16 to 902 1 to 890   available from MGC,   890/919
(96 %)
27 diff
(97.1 %id)
TI_57218115   .c 16 to 902 68 to 957       890/986
(90 %)
28 diff
(97.2 %id)
BF446064 breast, invasive ductal carcinoma, 3 pooled samples .c 23 to 233 1 to 211     Submitted on the opposite strand 211/211
(100 %)
0 diff
(100 %id)
DA688056   .c 157 to 698 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
CN423696 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 201 to 928 1 to 728       728/728
(100 %)
8 diff
(99.0 %id)
DA724069   .c 283 to 841 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DB036308 testis .c 350 to 895 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DB043297 testis .c 360 to 908 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BG722252 testis .c 363 to 1102 1 to 746       744/746
(99 %)
17 diff
(97.8 %id)
DB073429 testis .c 369 to 887 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
DB077287 testis .c 377 to 949 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB033015 testis .c 378 to 963 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
TI_57171652   .c 383 to 1131 59 to 805       747/805
(92 %)
7 diff
(99.2 %id)
BI828004 brain, medulla .c 390 to 1131 1 to 740       740/740
(100 %)
2 diff
(99.8 %id)
BI459811 testis .c 398 to 1154 1 to 756       756/828
(91 %)
19 diff
(97.8 %id)
DB040630 testis .c 402 to 953 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DB044270 testis .c 402 to 935 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB044912 testis .c 402 to 957 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB023692 testis .c 404 to 943 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB025924 testis .c 404 to 945 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DB044947 testis .c 404 to 971 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB054817 testis .c 404 to 964 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB056917 testis .c 404 to 935 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
DB058742 testis .c 404 to 944 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB081303 testis .c 404 to 902 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DB100682 testis .c 404 to 967 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BI831521 brain, medulla .c 406 to 1023 1 to 618       618/619
(99 %)
9 diff
(98.6 %id)
TI_57172184   .c 406 to 1023 33 to 650       618/651
(94 %)
13 diff
(98.1 %id)
DB324131   .c 2317 to 2860 544 to 1   tiling clone,   544/544
(100 %)
2 diff
(99.7 %id)
CN345242 embryonic stem cells, cell lines H1, H7, andH9 .c 2664 to 3306 13 to 655       643/655
(98 %)
6 diff
(99.1 %id)
BY996892   .c 2833 to 3397 29 to 595   tiling clone,   567/595
(95 %)
6 diff
(99.0 %id)
BQ423955 melanotic melanoma, skin .c 2870 to 3708 1 to 849       849/853
(99 %)
15 diff
(98.3 %id)
BP420782 small intestine .c 2877 to 3390 1 to 514   tiling clone, Submitted on the opposite strand 514/514
(100 %)
1 diff
(99.9 %id)
BM913351 amelanotic melanoma, cell line, skin .c 2893 to 3828 1 to 953       953/1079
(88 %)
26 diff
(97.6 %id)
AW800385 uterus .c 3022 to 3304 1 to 283       283/301
(94 %)
7 diff
(97.7 %id)
BQ373638 prostate_tumor .c 3119 to 3489 1 to 371       371/371
(100 %)
13 diff
(96.5 %id)
BI911343 leukocyte .c 3123 to 3878 26 to 802       777/1071
(72 %)
44 diff
(95.9 %id)
TI_57231607   .c 3123 to 3878 26 to 802       777/1071
(72 %)
44 diff
(95.9 %id)
BF362741 nervous_normal .c 3166 to 3440 273 to 2       272/273
(99 %)
0 diff
(100 %id)
CX873661 embryonic stem .c 3166 to 3986 1 to 820   tiling clone,   820/820
(100 %)
2 diff
(99.8 %id)
BE168821 head_neck .c 3197 to 3394 1 to 198       198/198
(100 %)
7 diff
(96.5 %id)
BM716861 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3352 to 4037 10 to 694       685/695
(98 %)
3 diff
(99.6 %id)
BF742130 breast .c 3385 to 3670 289 to 5     Submitted on the opposite strand 285/293
(97 %)
0 diff
(100 %id)
BF949213 nervous_normal .c 3385 to 3682 305 to 7       299/309
(96 %)
0 diff
(100 %id)
BF948972 nervous_normal .c 3400 to 3682 39 to 319       281/319
(88 %)
6 diff
(98.2 %id)
BQ222415 melanotic melanoma, skin .c 3410 to 4144 1 to 736   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 736/736
(100 %)
1 diff
(99.9 %id)
AA428820 ovarian tumor, ovary .c 3439 to 3754 1 to 316   fully sequenced,   316/316
(100 %)
4 diff
(98.8 %id)
BQ014811 Chondrosarcoma, Left Pubic Bone .c 3491 to 4144 672 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 654/654
(100 %)
5 diff
(99.3 %id)
BU628897 cell lines, Chondrosarcoma .c 3516 to 4144 648 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 630/630
(100 %)
6 diff
(99.1 %id)
BQ018242 lung, Metastatic Chondrosarcoma .c 3517 to 4144 646 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 628/628
(100 %)
1 diff
(99.9 %id)
BU624864 cell lines, Enchondroma .c 3517 to 4144 646 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 628/628
(100 %)
0 diff
(100 %id)
T72846 Liver .c 3533 to 3785 1 to 259   fully sequenced,   259/259
(100 %)
4 diff
(98.5 %id)
BI050524 placenta_normal .c 3594 to 4000 9 to 406       398/432
(92 %)
9 diff
(98.0 %id)
BQ370638 placenta_normal .c 3662 to 3905 33 to 275       243/275
(88 %)
6 diff
(97.9 %id)
AW103444 ovary, tumor, 5 pooled (see description) .c 3679 to 4142 464 to 1       464/464
(100 %)
2 diff
(99.6 %id)
AI376783 pooled .c 3718 to 4145 430 to 3   tiling clone,   428/430
(99 %)
0 diff
(100 %id)
AA568993 colon, colon tumor RER+ .c 3725 to 4142 418 to 1       418/418
(100 %)
5 diff
(98.9 %id)
AA429356 ovarian tumor, ovary .c 3734 to 4145 417 to 6   fully sequenced,   412/417
(98 %)
0 diff
(100 %id)
AA827716 germinal center B cell .c 3735 to 4143 422 to 15       408/422
(96 %)
0 diff
(100 %id)
AI337055 pooled germ cell tumors .c 3735 to 4142 420 to 13   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 408/408
(100 %)
0 diff
(100 %id)
T70576 Liver .c 3755 to 4046 293 to 1   fully sequenced,   293/293
(100 %)
5 diff
(98.3 %id)
AI201677 anaplastic oligodendroglioma, brain .c 3762 to 4144 396 to 15   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 382/382
(100 %)
3 diff
(99.3 %id)
AI623475 adenocarcinoma, Pancreas .c 3764 to 4143 401 to 21   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 381/381
(100 %)
4 diff
(99.0 %id)
AA586511 bulk germ cell seminoma .c 3857 to 4144 297 to 11   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 287/287
(100 %)
3 diff
(99.0 %id)
AW087269 colon, moderately differentiated adenocarcinoma .c 3866 to 4145 284 to 5       280/284
(98 %)
0 diff
(100 %id)
AI274825 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3885 to 4145 267 to 7       261/267
(97 %)
0 diff
(100 %id)
BQ023846 placenta .c 3893 to 4144 270 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 252/252
(100 %)
0 diff
(100 %id)
BQ897138 dorsal root ganglia .c 3895 to 4143 1 to 249   AAA   249/376
(66 %)
1 diff
(99.8 %id)
AW135852   .c 3994 to 4142 166 to 18   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 149/149
(100 %)
1 diff
(99.4 %id)
AI631572 pooled germ cell tumors .c 3995 to 4144 166 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 150/150
(100 %)
1 diff
(99.4 %id)
AI350644   .c 4034 to 4144 111 to 1       111/111
(100 %)
0 diff
(100 %id)
AW206663   .c 4034 to 4142 126 to 18   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 109/109
(100 %)
0 diff
(100 %id)
AW139003   .c 4035 to 4144 127 to 18   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 110/110
(100 %)
0 diff
(100 %id)
AK022786   .d 1 to 1921 1 to 1920 A145T tiling clone, available from FLJ,   1920/1920
(100 %)
5 diff
(99.8 %id)
CN423699 embryonic stem cells, cell lines H1, H7, andH9 .d 915 to 1630 1 to 714   tiling clone,   714/714
(100 %)
4 diff
(99.5 %id)
BP315383 mammary gland .e 1 to 581 2 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DB276813 uterus .e 1 to 538 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB267836 uterus .e 5 to 527 2 to 525   capped   524/524
(100 %)
4 diff
(99.3 %id)
DA392712 thalamus .e 10 to 593 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA655428   .e 10 to 581 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA444482 tongue, tumor tissue .e 16 to 569 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA011239 adrenal gland .e 18 to 575 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA153279 amygdala .e 28 to 596 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA294238 hippocampus .e 28 to 526 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DA779970 brain .e 28 to 596 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA888410   .e 28 to 433 2 to 407   capped   406/406
(100 %)
1 diff
(99.8 %id)
DA934204 Spleen .e 28 to 498 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
DA631163 Kidney .e 32 to 595 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BM044398 carcinoma, cell line, Prostate .e 42 to 691 1 to 649       649/669
(97 %)
6 diff
(99.2 %id)
DA656209   .e 42 to 522 2 to 482   capped   481/486
(98 %)
1 diff
(99.8 %id)
DA565171 heart .e 44 to 605 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BU543275 carcinoma, cell line, Prostate .e 44 to 883 1 to 853       853/913
(93 %)
18 diff
(98.1 %id)
BU543893 carcinoma, cell line, Prostate .e 44 to 866 1 to 840   tiling clone,   840/966
(86 %)
24 diff
(97.6 %id)
BG434094 placenta .e 699 to 1459 1 to 746   tiling clone,   746/750
(99 %)
19 diff
(97.5 %id)
BM083573 placenta .e 699 to 1269 1 to 574   tiling clone,   574/583
(98 %)
3 diff
(99.5 %id)
CR596148 Placenta Cot 25-normalized .f 1 to 1803 4 to 1806 exact tiling clone,   1806/1806
(100 %)
0 diff
(100 %id)
AU141645 thyroid gland .f 15 to 739 2 to 726   capped   725/725
(100 %)
0 diff
(100 %id)
BX327221 Placenta Cot 25-normalized .f 837 to 1541 2 to 705       704/931
(75 %)
12 diff
(98.8 %id)
BX327220 Placenta Cot 25-normalized .f 838 to 1764 1 to 919       919/920
(99 %)
20 diff
(97.9 %id)
BX371805 Placenta Cot 25-normalized .f 958 to 1792 843 to 4       840/843
(99 %)
1 diff
(99.9 %id)
AU159154 thyroid gland .f 2196 to 2687 493 to 1   tiling clone,   493/493
(100 %)
8 diff
(98.4 %id)
DA687047   .g 1 to 545 2 to 546   tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
BX441361 brain, fetal brain .g 51 to 989 1 to 939 A200X tiling clone,   939/939
(100 %)
0 diff
(100 %id)
BG823613 adenocarcinoma cell line, colon .h 1 to 929 1 to 940 V113S V114G T115D A116S A117C ... tiling clone,   940/985
(95 %)
46 diff
(95.4 %id)
AA071102   .h 69 to 440 1 to 376   tiling clone,   376/377
(99 %)
10 diff
(97.4 %id)
AA071103   .h 1396 to 1806 416 to 1   tiling clone,   416/416
(100 %)
6 diff
(98.6 %id)
BU183305 melanotic melanoma, cell line, skin .i 1 to 877 1 to 880 I64M C65A G66S F67* tiling clone,   884/921
(95 %)
22 diff
(97.7 %id)
BQ684162 melanotic melanoma, cell line, skin .i 1 to 848 1 to 852 I64M C65A G66S F67* tiling clone,   856/896
(95 %)
31 diff
(96.6 %id)
BQ677854 melanotic melanoma, cell line, skin .i 1 to 896 1 to 903 I64M C65A G66S F67* tiling clone,   907/951
(95 %)
31 diff
(96.8 %id)
DA580391   .j 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
BU685993 lung, Primary Lung Epithelial Cells .k-u 177 to 813 655 to 17   tiling clone, AAA   639/639
(100 %)
3 diff
(99.6 %id)
DA103675 cerebellum .l-u 1 to 542 2 to 543 exact tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
CB528379 Aveolar Macrophage, lung .m 1 to 730 744 to 19 G3V P4Q E5K R6G E7K ... tiling clone, AAA   726/726
(100 %)
4 diff
(99.5 %id)
DA233876 brain .n 1 to 580 2 to 582 R22L E23* tiling clone, capped   581/581
(100 %)
6 diff
(99.0 %id)
DB267667 uterus .o 1 to 576 2 to 578   tiling clone, capped   577/577
(100 %)
3 diff
(99.5 %id)
BF980483 duodenal adenocarcinoma, cell line, small intestine .o 81 to 658 13 to 590 P4L E5K V6* tiling clone,   765/834
(91 %)
31 diff
(96.3 %id)
DB064463 testis .p 1 to 560 2 to 562 A29C L30P A31G H32S L33P ... tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DB064970 testis .p 171 to 698 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DB082294 testis .p 174 to 600 2 to 428   capped   427/429
(99 %)
1 diff
(99.8 %id)
DB062644 testis .p 180 to 731 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
BG823481 adenocarcinoma cell line, colon .q 1 to 679 2 to 683 C30L V31C D32G T33H A34S ... tiling clone,   682/1021
(66 %)
4 diff
(99.7 %id)
CN423694 embryonic stem cells, cell lines H1, H7, andH9 .r 1 to 646 1 to 646 exact tiling clone,   646/646
(100 %)
2 diff
(99.7 %id)
DB048628 testis .s-u 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
DB125033 thymus .s-u 30 to 586 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
DB231486 trachea .t 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
BF589781 sciatic nerve .u-u 1 to 464 464 to 1 exact tiling clone,   467/467
(100 %)
0 diff
(100 %id)
BX477897   Gene SLC38A7, variant not shown         This clone was ignored    
DB083688 testis Gene SLC38A7, variant not shown       capped This clone was ignored    
DB340985 testis Gene SLC38A7, variant not shown         This clone was ignored    
TI_149305677   Gene SLC38A7, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l-u, .m, .n, .o, .p, .q, .r, .s-u, .t, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC