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Gene C12orf11TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
253 supporting clones for gene C12orf11 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC349600 brain .a -8 to 354 1 to 363   tiling clone,   363/363
(100 %)
3 diff
(99.2 %id)
CB989743 Human Placenta, placenta .a 1 to 756 24 to 783       764/784
(97 %)
13 diff
(98.4 %id)
DC365134   .a 5 to 509 1 to 506       506/506
(100 %)
2 diff
(99.7 %id)
NM_018164.2   .a 5 to 2974 1 to 2970 exact RefSeq, AAA   2970/2970
(100 %)
0 diff
(100 %id)
DB239903 trachea .a 6 to 573 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BE543321 cervical carcinoma cell line, cervix .a 12 to 715 1 to 725       725/868
(83 %)
27 diff
(96.9 %id)
BP236342 coronary artery .a 13 to 590 8 to 587       580/580
(100 %)
8 diff
(98.7 %id)
BX956450   .a 34 to 601 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DB443116 testis .a 35 to 517 1 to 483       483/483
(100 %)
13 diff
(97.4 %id)
DA449595 tongue, tumor tissue .a 39 to 598 2 to 563   capped   562/563
(99 %)
3 diff
(99.5 %id)
BP358528 mammary gland .a 40 to 617 1 to 581       550/581
(94 %)
14 diff
(97.6 %id)
DA930005 small intestine .a 47 to 614 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB487012 hypothalamus .a 51 to 488 1 to 438       438/438
(100 %)
2 diff
(99.6 %id)
CN310548 embryonic stem cells, cell lines H1, H7, andH9 .a 60 to 646 1 to 589       589/589
(100 %)
8 diff
(98.7 %id)
CN310542 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 124 to 722 1 to 598       598/598
(100 %)
3 diff
(99.5 %id)
DA318238 hippocampus .a 293 to 788 2 to 497   tiling clone, capped   496/498
(99 %)
9 diff
(98.2 %id)
BP351363   .a 298 to 878 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BC003081 Lymph, Burkitt lymphoma .a 316 to 2968 1 to 2653 E699K available from MGC, AAA   2653/2653
(100 %)
1 diff
(100.0 %id)
DA297802 hippocampus .a 327 to 895 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA889663   .a 331 to 790 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DB120932 thymus .a 331 to 906 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BE267795 Burkitt lymphoma, lymph .a 335 to 964 1 to 628       628/628
(100 %)
3 diff
(99.6 %id)
DA929633 small intestine .a 335 to 897 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AK001499   .a 340 to 2974 1 to 2635 E29G T53P L75P W459R available from FLJ,   2635/2635
(100 %)
6 diff
(99.8 %id)
BM754077 stomach .a 340 to 768 1 to 428       428/428
(100 %)
6 diff
(98.6 %id)
AU129505   .a 341 to 943 2 to 606   capped   605/605
(100 %)
7 diff
(98.9 %id)
BU941412 mixed (pool of 40 RNAs) .a 345 to 1125 1 to 782       782/785
(99 %)
16 diff
(98.0 %id)
BU958951 mixed (pool of 40 RNAs) .a 345 to 1069 1 to 726       726/728
(99 %)
7 diff
(99.1 %id)
BP279298   .a 346 to 927 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA716048   .a 347 to 927 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA782535 brain .a 347 to 903 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA393703 thalamus .a 348 to 915 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BP365822 lung .a 348 to 929 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AV762793 bone marrow .a 349 to 758 1 to 407       407/419
(97 %)
4 diff
(99.1 %id)
AV762795 bone marrow .a 349 to 758 1 to 407       407/419
(97 %)
4 diff
(99.1 %id)
DA934639 Spleen .a 349 to 871 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
CN310543 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 350 to 1148 1 to 800       800/800
(100 %)
5 diff
(99.4 %id)
BP284169 bone marrow .a 350 to 936 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
DA491152 brain .a 351 to 904 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA709672   .a 351 to 889 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
AK225336 Liver .a 354 to 2799 1 to 2446 W597R     2446/2446
(100 %)
2 diff
(100.0 %id)
CD691628 normal nasopharynx .a 354 to 902 23 to 571       549/571
(96 %)
6 diff
(99.0 %id)
BP217682 caudate nucleus .a 354 to 935 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP234390 coronary artery .a 354 to 936 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP234495 coronary artery .a 354 to 935 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP234963 coronary artery .a 354 to 935 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP240060 Liver .a 354 to 911 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
AU280249   .a 354 to 920 1 to 567       567/567
(100 %)
0 diff
(100 %id)
BP359409 mammary gland .a 354 to 935 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AL558424 T cells from T cell leukemia .a 355 to 1337 1 to 974       974/977
(99 %)
13 diff
(98.7 %id)
DA511373 brain .a 355 to 913 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA606826   .a 355 to 921 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA781544 brain .a 355 to 931 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA888172   .a 355 to 916 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA965129 stomach .a 355 to 916 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BC008368 Eye, retinoblastoma .a 358 to 2976 1 to 2619 exact tiling clone, available from MGC, AAA   2619/2619
(100 %)
1 diff
(100.0 %id)
DA580215   .a 359 to 920 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AL560326 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 362 to 1207 1 to 846       846/846
(100 %)
0 diff
(100 %id)
BF171894 blood .a 364 to 631 1 to 273       273/277
(98 %)
15 diff
(94.6 %id)
DN993974 brain, whole brain .a 364 to 1135 1 to 773       773/773
(100 %)
6 diff
(99.3 %id)
BM828032 stomach .a 366 to 1003 1 to 638       638/638
(100 %)
2 diff
(99.7 %id)
BX499883 Liver .a 369 to 603 1 to 235       235/235
(100 %)
7 diff
(97.1 %id)
BI222687 cervical carcinoma cell line, cervix .a 369 to 1016 1 to 663       661/665
(99 %)
29 diff
(95.7 %id)
DR763479 embryonic stem .a 370 to 1034 1 to 665       665/665
(100 %)
0 diff
(100 %id)
BP284436 bone marrow .a 370 to 961 1 to 592       592/592
(100 %)
2 diff
(99.7 %id)
BG177441 lymph, lymphoma, cell line .a 373 to 1048 1 to 681       681/973
(69 %)
13 diff
(98.7 %id)
DA752241   .a 373 to 935 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AK001492   .a 376 to 2968 1 to 2593 K454R R457P available from FLJ,   2593/2593
(100 %)
4 diff
(99.9 %id)
BP222240   .a 376 to 957 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP283015 bone marrow .a 376 to 956 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BE252709 eye, retinoblastoma .a 377 to 963 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
AU129479   .a 377 to 943 2 to 568   capped   567/569
(99 %)
5 diff
(99.2 %id)
BE258123 eye, retinoblastoma .a 379 to 973 1 to 598       598/819
(73 %)
24 diff
(97.1 %id)
DA397854 thalamus .a 381 to 970 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
BP363475 lung .a 383 to 965 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA190107 amygdala .a 384 to 956 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA666287   .a 384 to 942 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA582040 lung .a 386 to 929 2 to 546   capped   545/546
(99 %)
3 diff
(99.5 %id)
BF724897 eye, Iris .a 392 to 914 1 to 523     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 523/523
(100 %)
0 diff
(100 %id)
CN310545 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 423 to 1059 1 to 637       637/637
(100 %)
1 diff
(99.9 %id)
DA342975 substantia nigra .a 438 to 931 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DA657007   .a 438 to 1010 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CV026590 mixed .a 542 to 1125 1 to 583       583/585
(99 %)
4 diff
(99.4 %id)
EL733460 mixed .a 542 to 1125 1 to 584       584/588
(99 %)
10 diff
(98.3 %id)
BP284359 bone marrow .a 596 to 1176 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA601353   .a 671 to 1244 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA996487   .a 692 to 1229 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BF185281 bone marrow, from chronic myelogenous leukemia .a 766 to 1498 1 to 730       730/734
(99 %)
30 diff
(96.0 %id)
BU943443 mixed (pool of 40 RNAs) .a 779 to 1380 1 to 602       602/796
(75 %)
2 diff
(99.8 %id)
AA347492 heart .a 789 to 1138 1 to 351       351/354
(99 %)
3 diff
(99.2 %id)
AW956806   .a 790 to 1181 1 to 394       394/394
(100 %)
11 diff
(97.3 %id)
AW956807   .a 790 to 1410 1 to 623       623/623
(100 %)
11 diff
(98.3 %id)
BG329727 eye, retinoblastoma .a 829 to 1621 1 to 792       792/926
(85 %)
23 diff
(97.6 %id)
BQ232673 melanotic melanoma, skin .a 849 to 1409 1 to 565       565/907
(62 %)
12 diff
(98.7 %id)
BG484528 lung .a 866 to 1566 1 to 708       708/710
(99 %)
13 diff
(98.2 %id)
BU158865 embryonal carcinoma, cell line, testis .a 866 to 1574 1 to 717       717/878
(81 %)
7 diff
(99.3 %id)
AA307478 colon .a 879 to 1277 1 to 404       404/404
(100 %)
4 diff
(99.1 %id)
AW957793   .a 880 to 1431 1 to 552       552/661
(83 %)
7 diff
(99.0 %id)
AW957866   .a 880 to 1219 1 to 340       340/369
(92 %)
14 diff
(96.3 %id)
AW957871   .a 880 to 1521 1 to 647       647/654
(98 %)
20 diff
(97.0 %id)
DA897700 skeletal muscle .a 914 to 1292 2 to 380   capped   379/379
(100 %)
0 diff
(100 %id)
BE877085 large cell carcinoma, undifferentiated, lung .a 925 to 1726 1 to 797       797/827
(96 %)
23 diff
(97.3 %id)
BP239874 Liver .a 933 to 1535 1 to 603       603/603
(100 %)
5 diff
(99.2 %id)
BE543712 cervical carcinoma cell line, cervix .a 956 to 1694 1 to 733       733/877
(83 %)
12 diff
(98.7 %id)
CF553003 Pooled muscle (cardiac and skeletal) .a 976 to 1851 19 to 900       882/900
(98 %)
13 diff
(98.6 %id)
CB120129 Liver .a 1009 to 1172 1 to 164       164/164
(100 %)
0 diff
(100 %id)
BG575389 breast, mammary adenocarcinoma, cell line .a 1087 to 1873 1 to 791       791/791
(100 %)
8 diff
(99.0 %id)
CB118063 brain .a 1098 to 1426 1 to 329       329/329
(100 %)
0 diff
(100 %id)
BE769049 prostate_tumor .a 1126 to 1559 8 to 438       430/438
(98 %)
11 diff
(97.5 %id)
FN145449 breast carcinoma .a 1177 to 1278 103 to 6     Submitted on the opposite strand 98/103
(95 %)
2 diff
(98.1 %id)
DB192439 ovary, tumor tissue .a 1178 to 1728 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BQ354680 head_neck .a 1232 to 1748 1 to 518       518/518
(100 %)
16 diff
(97.0 %id)
BM470394 eye, retinoblastoma .a 1255 to 2188 1 to 944       942/1002
(94 %)
17 diff
(98.4 %id)
BG945059 amnion_normal .a 1262 to 1600 1 to 339       339/339
(100 %)
3 diff
(99.2 %id)
AA233030 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1282 to 1499 1 to 218       218/218
(100 %)
0 diff
(100 %id)
BF969239 adrenal cortex carcinoma, cell line, adrenal gland .a 1286 to 2028 1 to 741       741/744
(99 %)
10 diff
(98.7 %id)
AY211927   .a 1345 to 2080 1 to 737       737/737
(100 %)
8 diff
(99.0 %id)
BU187861 eye, retinoblastoma .a 1352 to 2121 1 to 781       781/820
(95 %)
16 diff
(98.1 %id)
BG392331 embryonal carcinoma, cell line, testis .a 1363 to 2113 1 to 755       755/859
(87 %)
13 diff
(98.5 %id)
BP249461 Kidney .a 1366 to 1960 1 to 594       597/594
(100 %)
2 diff
(99.7 %id)
BE781202 eye, retinoblastoma .a 1380 to 2079 1 to 705       705/705
(100 %)
14 diff
(98.1 %id)
BU183963 eye, retinoblastoma .a 1419 to 2324 8 to 911       904/914
(98 %)
19 diff
(98.0 %id)
CB160885 Liver .a 1437 to 2001 1 to 565       565/565
(100 %)
0 diff
(100 %id)
CR612853 B cells (Ramos cell line) Cot 25-normalized .a 1450 to 2829 1 to 1380       1380/1380
(100 %)
0 diff
(100 %id)
AL561377 B cells from Burkitt lymphoma .a 1451 to 2146 1 to 696   fully sequenced,   696/696
(100 %)
4 diff
(99.5 %id)
BF724896 eye, Iris .a 1465 to 2064 606 to 7   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 600/606
(99 %)
1 diff
(99.9 %id)
BE018688 cervix .a 1488 to 2083 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
BF666905 brain, primitive neuroectoderm .a 1506 to 2114 1 to 612       612/839
(72 %)
15 diff
(98.3 %id)
BP203197 coronary artery .a 1516 to 2098 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BG403438 bladder, transitional cell papilloma, cell line .a 1550 to 2244 1 to 692       692/693
(99 %)
6 diff
(99.2 %id)
BI862590 breast, mammary adenocarcinoma, cell line .a 1617 to 2087 1 to 483       483/494
(97 %)
25 diff
(95.0 %id)
TI_57191926   .a 1617 to 2087 48 to 530       483/541
(89 %)
24 diff
(95.6 %id)
CB143998 Liver .a 1629 to 2021 1 to 393       393/393
(100 %)
1 diff
(99.8 %id)
BM555372 duodenal adenocarcinoma, cell line, small intestine .a 1635 to 2583 1 to 953       953/975
(97 %)
13 diff
(98.7 %id)
CN310547 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1636 to 2293 13 to 670       658/670
(98 %)
6 diff
(99.2 %id)
CN310546 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1698 to 2323 1 to 626       626/626
(100 %)
0 diff
(100 %id)
BE926722 breast .a 1722 to 1996 1 to 275       275/275
(100 %)
4 diff
(98.6 %id)
BG026501 Bone, osteosarcoma, cell line .a 1744 to 2493 1 to 750       750/1186
(63 %)
24 diff
(98.0 %id)
BG254072 adenocarcinoma, cell line, Prostate .a 1749 to 2487 1 to 741       741/788
(94 %)
13 diff
(98.4 %id)
BQ434430 melanotic melanoma, skin .a 1765 to 2618 1 to 863       863/863
(100 %)
14 diff
(98.4 %id)
BE379882 bladder, carcinoma, cell line .a 1774 to 2346 1 to 572   fully sequenced,   572/572
(100 %)
1 diff
(99.9 %id)
BP421075 small intestine .a 1780 to 2218 1 to 439     Submitted on the opposite strand 439/439
(100 %)
1 diff
(99.8 %id)
FN091451 breast carcinoma .a 1788 to 1878 89 to 1     Submitted on the opposite strand 89/95
(93 %)
4 diff
(95.8 %id)
AA300363 testis .a 1822 to 2144 1 to 323       323/323
(100 %)
4 diff
(98.8 %id)
AV747378 Pituitary .a 1876 to 2216 335 to 1     Submitted on the opposite strand 335/335
(100 %)
7 diff
(98.0 %id)
AI569851 Kidney .a 1893 to 2250 358 to 1       358/358
(100 %)
0 diff
(100 %id)
BE905914 epithelioid carcinoma, Pancreas .a 1906 to 2493 1 to 591       591/672
(87 %)
8 diff
(98.9 %id)
BX442055 brain, fetal brain .a 1917 to 2897 1021 to 53       969/1048
(92 %)
34 diff
(96.8 %id)
BG178012 adenocarcinoma, cell line, Prostate .a 1917 to 2666 1 to 753       751/952
(78 %)
30 diff
(96.9 %id)
AW601587 breast .a 1919 to 2279 1 to 368       365/368
(99 %)
20 diff
(94.6 %id)
BF034062 adenocarcinoma, ovary .a 1930 to 2623 1 to 696       696/925
(75 %)
6 diff
(99.4 %id)
AI868450 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1954 to 2250 297 to 1       297/297
(100 %)
0 diff
(100 %id)
AL580245 T cells from T cell leukemia .a 1966 to 2941 966 to 5       962/970
(99 %)
13 diff
(98.7 %id)
BF575139 muscle (skeletal) .a 2001 to 2623 1 to 626       626/832
(75 %)
12 diff
(98.6 %id)
AL581792 B cells (Ramos cell line), B cells from Burkitt lymphoma .a 2050 to 2776 901 to 175       727/901
(80 %)
2 diff
(99.8 %id)
AL582695 B cells from Burkitt lymphoma .a 2085 to 2829 744 to 1   fully sequenced,   744/744
(100 %)
3 diff
(99.6 %id)
BF907150 uterus_tumor .a 2087 to 2320 239 to 6     Submitted on the opposite strand 234/244
(95 %)
12 diff
(95.1 %id)
BI334536 cervical carcinoma cell line, cervix .a 2105 to 2980 1 to 871       871/882
(98 %)
27 diff
(97.0 %id)
CD689262 normal nasopharynx .a 2109 to 2660 40 to 591       556/591
(94 %)
9 diff
(98.5 %id)
BG029993 breast, mammary adenocarcinoma, cell line .a 2140 to 2938 1 to 789       789/941
(83 %)
23 diff
(97.6 %id)
TI_149289730   .a 2141 to 2974 898 to 79   AAA   820/972
(84 %)
16 diff
(98.4 %id)
BE897137 melanotic melanoma, skin .a 2161 to 2879 1 to 713       713/1042
(68 %)
13 diff
(98.8 %id)
BF035227 adenocarcinoma, ovary .a 2166 to 2852 1 to 689       689/689
(100 %)
2 diff
(99.8 %id)
BF812290 colon_ins .a 2179 to 2424 246 to 1     Submitted on the opposite strand 246/246
(100 %)
10 diff
(96.0 %id)
CN310544 embryonic stem cells, DMSO-treated H9 cellline .a 2185 to 2896 1 to 713       713/713
(100 %)
2 diff
(99.8 %id)
BF084153 colon .a 2193 to 2611 416 to 1       416/416
(100 %)
8 diff
(98.1 %id)
BF084155 colon .a 2208 to 2599 396 to 8       389/434
(89 %)
2 diff
(99.6 %id)
BX425240 neuroblastoma .a 2216 to 2978 1 to 763   fully sequenced,   763/763
(100 %)
8 diff
(99.0 %id)
ES315701 melanoma cell line .a 2225 to 2739 604 to 90     Submitted on the opposite strand 515/604
(85 %)
6 diff
(99.1 %id)
AW082547 esophagus, squamous cell carcinoma .a 2231 to 2608 381 to 1       381/396
(96 %)
11 diff
(97.3 %id)
AL137401 testis .a 2242 to 2974 1 to 734   available from DKFZ, AAA   734/734
(100 %)
2 diff
(99.8 %id)
BE886832 leiomyosarcoma, uterus .a 2254 to 2961 1 to 709       709/711
(99 %)
16 diff
(97.8 %id)
CB163447 Liver .a 2268 to 2791 1 to 525       525/525
(100 %)
2 diff
(99.7 %id)
BQ574211 Chondrosarcoma Grade II, Left Pelvis .a 2279 to 2974 714 to 19   AAA   696/696
(100 %)
0 diff
(100 %id)
BE673019 pooled germ cell tumors .a 2280 to 2974 696 to 1       696/702
(99 %)
14 diff
(98.1 %id)
BM971078 lung .a 2281 to 2974 711 to 19   AAA   693/693
(100 %)
2 diff
(99.8 %id)
BE379802 bladder, carcinoma, cell line .a 2316 to 2902 609 to 19   fully sequenced,   591/609
(97 %)
2 diff
(99.7 %id)
BQ020134 Chondrosarcoma, Left Pubic Bone .a 2318 to 2974 675 to 19   AAA   657/657
(100 %)
0 diff
(100 %id)
AW975844   .a 2322 to 2973 652 to 1     Submitted on the opposite strand 652/653
(99 %)
10 diff
(98.5 %id)
AW675134 cervix .a 2323 to 2762 1 to 440       440/440
(100 %)
2 diff
(99.6 %id)
BU632864 cell lines, Chondrosarcoma .a 2330 to 2974 663 to 19   AAA   645/645
(100 %)
0 diff
(100 %id)
BM684866 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2333 to 2979 660 to 14   tiling clone, AAA   647/647
(100 %)
0 diff
(100 %id)
AU151585   .a 2389 to 2968 577 to 1       577/577
(100 %)
14 diff
(97.6 %id)
AU151607   .a 2416 to 2974 551 to 1       551/575
(95 %)
21 diff
(96.4 %id)
BX433679 neuroblastoma .a 2540 to 2952 412 to 2   fully sequenced,   411/412
(99 %)
0 diff
(100 %id)
BE302258 cervix .a 2585 to 2821 237 to 1       237/237
(100 %)
0 diff
(100 %id)
AK297948   .b 1 to 2310 1 to 2310 exact tiling clone,   2310/2310
(100 %)
2 diff
(100.0 %id)
DC357655   .b 1 to 552 1 to 552       552/553
(99 %)
0 diff
(100 %id)
TI_154101770   .b 1676 to 2436 822 to 62   tiling clone, AAA   761/940
(80 %)
8 diff
(99.2 %id)
BG115871 duodenal adenocarcinoma, cell line, small intestine .b 1679 to 2316 1 to 644       644/1496
(43 %)
33 diff
(97.8 %id)
BX089662 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1698 to 2310 1 to 613   tiling clone, AAA   613/613
(100 %)
1 diff
(99.9 %id)
AA479256 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1698 to 2117 1 to 421       421/421
(100 %)
2 diff
(99.6 %id)
BM995858 Chondrosarcoma, Left Pubic Bone .b 1728 to 2310 601 to 19   AAA   583/583
(100 %)
1 diff
(99.9 %id)
BQ015909 lung, Metastatic Chondrosarcoma .b 1737 to 2304 586 to 19   AAA   568/568
(100 %)
1 diff
(99.9 %id)
CA445270 Chondrosarcoma, Left Pubic Bone .b 1764 to 2436 691 to 19   AAA   673/673
(100 %)
0 diff
(100 %id)
BF001398 colon, colon tumor, RER+ .b 1770 to 2310 541 to 1       541/541
(100 %)
0 diff
(100 %id)
BF109908 pooled .b 1771 to 2314 548 to 5       544/548
(99 %)
0 diff
(100 %id)
AW024440 Kidney .b 1772 to 2302 533 to 3       531/533
(99 %)
0 diff
(100 %id)
BF111317 pooled .b 1772 to 2313 542 to 1       542/542
(100 %)
0 diff
(100 %id)
BF434200 Kidney .b 1775 to 2310 536 to 1       536/536
(100 %)
0 diff
(100 %id)
AI656136 pooled germ cell tumors .b 1781 to 2302 522 to 1       522/522
(100 %)
0 diff
(100 %id)
AI742737 pooled .b 1781 to 2310 543 to 14   AAA   530/530
(100 %)
2 diff
(99.7 %id)
BF222717 pooled germ cell tumors .b 1781 to 2310 530 to 1       530/530
(100 %)
0 diff
(100 %id)
AW467007 2 pooled tumors (clear cell type), Kidney .b 1785 to 2310 541 to 16   AAA   526/526
(100 %)
4 diff
(99.3 %id)
AA394229   .b 1807 to 2301 1 to 496   fully sequenced,   496/496
(100 %)
2 diff
(99.6 %id)
BE501608 malignant melanoma, metastatic to lymphnode, skin .b 1812 to 2157 346 to 1       346/346
(100 %)
0 diff
(100 %id)
AI887764 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1814 to 2157 344 to 1       344/344
(100 %)
0 diff
(100 %id)
BF223243 pooled germ cell tumors .b 1814 to 2311 498 to 1       498/498
(100 %)
0 diff
(100 %id)
AW043621 pooled .b 1830 to 2313 464 to 1       464/468
(99 %)
22 diff
(95.3 %id)
BQ348765 head_neck .b 1842 to 2211 370 to 3       368/370
(99 %)
0 diff
(100 %id)
BF594109 brain, glioblastoma (pooled) .b 1843 to 2294 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
AI360864 brain, glioblastoma (pooled) .b 1844 to 2306 463 to 1       463/463
(100 %)
2 diff
(99.6 %id)
AI421684 brain, glioblastoma (pooled) .b 1845 to 2295 458 to 8       451/458
(98 %)
0 diff
(100 %id)
AA399097   .b 1846 to 2298 1 to 452   fully sequenced,   452/452
(100 %)
1 diff
(99.8 %id)
CA444108 Fibrosarcoma .b 1846 to 2310 481 to 19   AAA   463/463
(100 %)
3 diff
(99.4 %id)
AA723208 heart .b 1857 to 2312 456 to 1       456/456
(100 %)
0 diff
(100 %id)
AI341376 pooled germ cell tumors .b 1870 to 2310 441 to 1       441/441
(100 %)
0 diff
(100 %id)
DB556340 hypothalamus .b 1883 to 2304 1 to 421     Submitted on the opposite strand 421/421
(100 %)
2 diff
(99.6 %id)
AW301247 Kidney .b 1884 to 2310 427 to 1       427/427
(100 %)
1 diff
(99.8 %id)
AA934628 pooled germ cell tumors .b 1889 to 2302 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
AW002539 pooled germ cell tumors .b 1894 to 2302 408 to 1       408/408
(100 %)
1 diff
(99.8 %id)
R44861 whole brain .b 1898 to 2314 427 to 6       422/427
(98 %)
6 diff
(98.6 %id)
BG941284 blood .b 1901 to 2300 1 to 400       400/400
(100 %)
0 diff
(100 %id)
DB508035 testis .b 1901 to 2310 1 to 410     Submitted on the opposite strand 410/410
(100 %)
8 diff
(98.1 %id)
AI753896 bone marrow stroma .b 1931 to 2304 396 to 20   AAA   377/466
(80 %)
7 diff
(98.5 %id)
AA397916   .b 1943 to 2310 387 to 20   fully sequenced, AAA   368/368
(100 %)
0 diff
(100 %id)
AI265941   .b 1944 to 2310 383 to 18   AAA   366/366
(100 %)
1 diff
(99.8 %id)
BG221517   .b 1955 to 2184 1 to 229       229/244
(93 %)
11 diff
(95.5 %id)
AA347491 heart .b 1958 to 2310 356 to 1       356/439
(81 %)
4 diff
(99.1 %id)
AI421611 brain, glioblastoma (pooled) .b 1970 to 2306 337 to 1       337/337
(100 %)
2 diff
(99.5 %id)
AI334783 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1971 to 2157 187 to 1       187/187
(100 %)
0 diff
(100 %id)
AI368464 brain, glioblastoma (pooled) .b 1979 to 2302 324 to 1       324/324
(100 %)
0 diff
(100 %id)
AI583694 pooled germ cell tumors .b 1979 to 2311 333 to 1       333/336
(99 %)
0 diff
(100 %id)
AA824467 germinal center B cell .b 1987 to 2314 333 to 6       328/333
(98 %)
0 diff
(100 %id)
FN169214 breast carcinoma .b 1996 to 2101 1 to 113       113/113
(100 %)
12 diff
(89.4 %id)
AI470270 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 1999 to 2157 158 to 1       158/158
(100 %)
1 diff
(99.4 %id)
AW439058 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2010 to 2157 152 to 1       152/155
(98 %)
4 diff
(97.5 %id)
D59322   .b 2041 to 2307 265 to 1       265/269
(98 %)
14 diff
(94.8 %id)
AA027249 heart .b 2066 to 2244 180 to 1       180/180
(100 %)
2 diff
(98.9 %id)
AI400552 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2074 to 2310 237 to 1       237/237
(100 %)
0 diff
(100 %id)
AA479106 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2118 to 2314 201 to 5       197/201
(98 %)
0 diff
(100 %id)
AA398207   .b 2127 to 2310 203 to 20   fully sequenced, AAA   184/184
(100 %)
0 diff
(100 %id)
AW105132 pooled .b 2178 to 2310 152 to 20   AAA   133/133
(100 %)
3 diff
(97.8 %id)
N22151 cochlea, ear .b 2187 to 2311 125 to 1       125/125
(100 %)
0 diff
(100 %id)
DA362087 subthalamic nucleus .c 1 to 559 2 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DR158451 human embryonic stem cells differentiated toan early endodermal cell type .c 2 to 820 1 to 818   tiling clone,   818/818
(100 %)
3 diff
(99.7 %id)
DA747878   .c 43 to 515 2 to 475   capped   474/474
(100 %)
1 diff
(99.8 %id)
BE938831 testis_normal .c 797 to 1263 1 to 467   tiling clone,   467/474
(98 %)
22 diff
(95.4 %id)
BM454586 embryonal carcinoma, cell line, testis .d 1 to 875 1 to 879   tiling clone,   879/1002
(87 %)
6 diff
(99.5 %id)
BP195346 brain .d 804 to 1288 1 to 484   tiling clone,   484/617
(78 %)
24 diff
(96.2 %id)
AF274950   .e 1 to 1373 8 to 1381 T143N I144N Y145I N146Q V148S ... tiling clone, AAA   1374/1381
(99 %)
18 diff
(98.7 %id)
BG777718 adenocarcinoma, Prostate .e 18 to 643 1 to 626       626/626
(100 %)
1 diff
(99.9 %id)
AK001222   .e 91 to 1289 1 to 1201   tiling clone, available from FLJ,   1201/1202
(99 %)
3 diff
(99.8 %id)
AU123891   .e 91 to 843 2 to 760   capped   759/801
(94 %)
9 diff
(98.9 %id)
BE929233 placenta_normal .e 166 to 575 412 to 3       410/412
(99 %)
12 diff
(97.1 %id)
CK001415 brain/CNS, Bulk tissue from Human Spinal cord .f 1 to 671 1 to 667 L206X T211Q I212Y Y213T N214L ... tiling clone,   667/670
(99 %)
10 diff
(98.6 %id)
BF759696 colon .g 1 to 386 387 to 1 C18* tiling clone, Submitted on the opposite strand 387/388
(99 %)
16 diff
(95.9 %id)
DB218316 trachea .h 1 to 519 2 to 520 exact tiling clone, capped   519/519
(100 %)
0 diff
(100 %id)
DA349334 substantia nigra .h 289 to 875 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
R19425 whole brain .h 707 to 951 1 to 246   tiling clone,   246/249
(98 %)
3 diff
(98.8 %id)
DB310322 substantia nigra .h 1862 to 2386 527 to 1   tiling clone,   527/529
(99 %)
2 diff
(99.7 %id)
R44674 whole brain .h 1976 to 2383 419 to 7   tiling clone,   413/424
(97 %)
12 diff
(97.2 %id)
DA319227 hippocampus .i 1 to 563 2 to 564 exact tiling clone, to resequence, capped   563/563
(100 %)
1 diff
(99.9 %id)
BG058333 head/neck, nasopharyngeal carcinoma .i 422 to 733 45 to 356   tiling clone,   312/356
(87 %)
6 diff
(98.4 %id)
DB308996 hippocampus .i 1438 to 1972 534 to 1   tiling clone, to resequence,   534/534
(100 %)
13 diff
(97.6 %id)
DB308345 hippocampus Gene C12orf11, variant not shown         This clone was ignored    
DA308075 hippocampus Gene C12orf11, variant not shown       capped This clone was ignored    
BP232494 muscle Gene C12orf11, variant not shown         This clone was ignored    
BM832735 stomach Gene C12orf11, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI