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Gene DNAJC17TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
113 supporting clones for gene DNAJC17 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM153789 leukopheresis DNAJC17.a 1 to 180 1 to 180   tiling clone,   180/192
(93 %)
12 diff
(93.8 %id)
DW413836 Liver DNAJC17.a 53 to 355 8 to 310       303/318
(95 %)
6 diff
(98.2 %id)
NM_018163.2   DNAJC17.a 61 to 1077 1 to 1017 exact RefSeq, AAA   1017/1017
(100 %)
0 diff
(100 %id)
DA341962 substantia nigra DNAJC17.a 62 to 548 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DA444882 tongue, tumor tissue DNAJC17.a 62 to 640 2 to 580   capped   579/580
(99 %)
1 diff
(99.9 %id)
DA086385 cerebellum DNAJC17.a 63 to 578 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
DA096184 cerebellum DNAJC17.a 63 to 633 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA448565 tongue, tumor tissue DNAJC17.a 63 to 522 2 to 466   capped   463/465
(99 %)
8 diff
(98.3 %id)
BX488864   DNAJC17.a 65 to 652 1 to 588       588/588
(100 %)
4 diff
(99.4 %id)
BM821773 stomach DNAJC17.a 66 to 644 1 to 578       578/578
(100 %)
4 diff
(99.4 %id)
BM832392 stomach DNAJC17.a 66 to 231 1 to 166       166/166
(100 %)
0 diff
(100 %id)
BM832284 stomach DNAJC17.a 66 to 350 1 to 285       285/285
(100 %)
2 diff
(99.3 %id)
BM832296 stomach DNAJC17.a 66 to 454 1 to 389       389/389
(100 %)
1 diff
(99.8 %id)
BM854249 stomach DNAJC17.a 66 to 454 1 to 390       390/390
(100 %)
1 diff
(99.8 %id)
DA211137 brain DNAJC17.a 67 to 634 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA317142 hippocampus DNAJC17.a 67 to 614 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA319562 hippocampus DNAJC17.a 67 to 605 2 to 540   capped   539/540
(99 %)
1 diff
(99.9 %id)
DA328526 hippocampus DNAJC17.a 67 to 631 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA339201 hippocampus DNAJC17.a 67 to 664 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
DA506588 brain DNAJC17.a 67 to 628 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA783896 brain DNAJC17.a 67 to 590 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA801697 brain DNAJC17.a 67 to 636 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DW433302 Liver DNAJC17.a 68 to 314 17 to 263       247/263
(93 %)
6 diff
(97.8 %id)
DA338870 hippocampus DNAJC17.a 69 to 662 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
CN426472 embryonic stem cells, cell lines H1, H7, andH9 DNAJC17.a 73 to 798 1 to 727       727/727
(100 %)
3 diff
(99.6 %id)
BF312404 brain, neuroblastoma DNAJC17.a 74 to 741 1 to 667       667/938
(71 %)
16 diff
(98.3 %id)
BC000048 Brain, neuroblastoma DNAJC17.a 75 to 1076 1 to 1003 exact tiling clone, available from MGC, AAA   1003/1003
(100 %)
3 diff
(99.8 %id)
BE314717 brain, neuroblastoma DNAJC17.a 75 to 704 23 to 653       631/654
(96 %)
11 diff
(98.4 %id)
CF128388 Chondrosarcoma Lung Metastasis cell lines, lung DNAJC17.a 79 to 765 1 to 687       687/687
(100 %)
2 diff
(99.8 %id)
TI_154194257   DNAJC17.a 79 to 970 48 to 928       881/1037
(84 %)
23 diff
(97.8 %id)
BM832033 stomach DNAJC17.a 80 to 389 1 to 310       310/310
(100 %)
0 diff
(100 %id)
AK001496   DNAJC17.a 82 to 1074 1 to 993 exact tiling clone, available from FLJ,   993/993
(100 %)
0 diff
(100 %id)
CD246883 embryonic stem cells, WA01, passage 38 DNAJC17.a 82 to 950 16 to 885       870/886
(98 %)
10 diff
(98.9 %id)
DA108876 cerebellum DNAJC17.a 83 to 673 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
AU129492   DNAJC17.a 83 to 565 2 to 485   capped   484/500
(96 %)
5 diff
(99.0 %id)
CR976221 T-Lymphocytes DNAJC17.a 87 to 860 1 to 777       777/777
(100 %)
4 diff
(99.5 %id)
TI_1948085355   DNAJC17.a 92 to 885 128 to 921       794/1349
(58 %)
8 diff
(99.5 %id)
TI_1948085431   DNAJC17.a 92 to 781 121 to 812       692/1379
(50 %)
14 diff
(99.0 %id)
TI_1948085522   DNAJC17.a 92 to 283 123 to 314       192/218
(88 %)
6 diff
(97.3 %id)
TI_1948085601   DNAJC17.a 92 to 883 124 to 915       792/1347
(58 %)
15 diff
(98.9 %id)
CV025799 mixed DNAJC17.a 93 to 739 1 to 646       646/646
(100 %)
5 diff
(99.3 %id)
BX283275 choriocarcinoma, placenta DNAJC17.a 102 to 609 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
BE731728 choriocarcinoma, placenta DNAJC17.a 123 to 886 1 to 759       759/928
(81 %)
9 diff
(99.1 %id)
R20064 whole brain DNAJC17.a 128 to 479 1 to 354       354/414
(85 %)
11 diff
(97.4 %id)
CN426473 embryonic stem cells, cell lines H1, H7, andH9 DNAJC17.a 146 to 741 1 to 596       596/596
(100 %)
0 diff
(100 %id)
BX384373   DNAJC17.a 266 to 1074 6 to 813       808/813
(99 %)
8 diff
(99.1 %id)
AI908417 breast DNAJC17.a 299 to 565 1 to 267       267/267
(100 %)
3 diff
(98.9 %id)
CA503061 Human Lung Epithelial cells, lung DNAJC17.a 321 to 1074 774 to 20   AAA   755/755
(100 %)
2 diff
(99.8 %id)
BE272910 Kidney, renal cell adenocarcinoma DNAJC17.a 327 to 680 1 to 354       354/356
(99 %)
1 diff
(99.8 %id)
BQ680963 melanotic melanoma, cell line, skin DNAJC17.a 328 to 1078 1 to 754       754/931
(80 %)
13 diff
(98.7 %id)
BG290975 bladder, transitional cell papilloma, cell line DNAJC17.a 338 to 1062 1 to 723       723/763
(94 %)
12 diff
(98.5 %id)
CB241288 Human Lung Epithelial cells, lung DNAJC17.a 345 to 1074 749 to 20   AAA   730/730
(100 %)
1 diff
(99.9 %id)
BQ674425 epidermoid carcinoma, cell line, salivary gland DNAJC17.a 354 to 1028 1 to 680       680/926
(73 %)
21 diff
(97.8 %id)
BG282776 adenocarcinoma, cell line, Prostate DNAJC17.a 383 to 1070 1 to 688       688/1116
(61 %)
6 diff
(99.5 %id)
BE079312 breast DNAJC17.a 435 to 1042 1 to 607       607/607
(100 %)
3 diff
(99.6 %id)
BF921407 nervous_tumor DNAJC17.a 451 to 920 479 to 10     Submitted on the opposite strand 470/557
(84 %)
1 diff
(99.9 %id)
FN084122 breast carcinoma DNAJC17.a 468 to 522 1 to 54       54/55
(98 %)
4 diff
(92.8 %id)
BF842773 head_neck DNAJC17.a 503 to 1022 519 to 2     Submitted on the opposite strand 518/520
(99 %)
6 diff
(98.9 %id)
BF593658 brain, glioblastoma (pooled) DNAJC17.a 517 to 1074 561 to 2       560/561
(99 %)
1 diff
(99.9 %id)
AU151596   DNAJC17.a 565 to 1074 509 to 1       509/544
(93 %)
11 diff
(98.0 %id)
BF914990 uterus_tumor DNAJC17.a 609 to 843 1 to 235       235/235
(100 %)
0 diff
(100 %id)
BF312301 brain, neuroblastoma DNAJC17.a 632 to 1074 1 to 440   AAA   440/440
(100 %)
3 diff
(99.4 %id)
BG950576 colon DNAJC17.a 687 to 1040 1 to 354       355/354
(100 %)
24 diff
(93.3 %id)
BI005213 head_normal DNAJC17.a 691 to 912 15 to 236       223/236
(94 %)
8 diff
(96.7 %id)
BI052155 placenta_normal DNAJC17.a 691 to 947 11 to 269       259/269
(96 %)
10 diff
(96.3 %id)
AI933412 anaplastic oligodendroglioma, brain DNAJC17.a 691 to 1056 388 to 24       365/399
(91 %)
12 diff
(97.0 %id)
AA830113 germinal center B cell DNAJC17.a 702 to 950 246 to 1       246/246
(100 %)
3 diff
(98.8 %id)
BF510176   DNAJC17.a 769 to 1074 323 to 18   AAA   306/314
(97 %)
2 diff
(99.4 %id)
BI014786 lung_tumor DNAJC17.a 775 to 1082 25 to 335       311/424
(73 %)
13 diff
(97.0 %id)
BQ354465 head_neck DNAJC17.a 842 to 1016 1 to 175       175/179
(97 %)
10 diff
(94.5 %id)
BI053261 placenta_normal DNAJC17.a 846 to 1048 30 to 230       201/230
(87 %)
9 diff
(96.1 %id)
BI002847 head_normal DNAJC17.a 883 to 1082 28 to 231       204/294
(69 %)
10 diff
(96.6 %id)
AA872849 2 pooled tumors (clear cell type), Kidney DNAJC17.a 932 to 1030 97 to 1       97/97
(100 %)
2 diff
(98.0 %id)
AA834211 Kidney, kidney tumor DNAJC17.a 963 to 1074 141 to 30   AAA   112/112
(100 %)
1 diff
(99.2 %id)
BX951969   DNAJC17.b 1 to 678 1 to 678   tiling clone,   678/678
(100 %)
1 diff
(99.9 %id)
BI052160 placenta_normal DNAJC17.b 601 to 1024 1 to 424   tiling clone,   424/424
(100 %)
9 diff
(97.9 %id)
AK309307 tongue, tumor tissue DNAJC17.c 1 to 904 1 to 904 exact tiling clone,   904/904
(100 %)
2 diff
(99.8 %id)
DA452479 tongue, tumor tissue DNAJC17.c 2 to 571 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
BQ025675 placenta DNAJC17.d 1 to 529 550 to 22 T14I D121E tiling clone,   529/550
(96 %)
1 diff
(99.9 %id)
AK310140 synovial membrane tissue from rheumatoidarthritis DNAJC17.e 1 to 987 1 to 987 exact tiling clone,   987/987
(100 %)
1 diff
(99.9 %id)
DA971905 synovial membrane tissue from rheumatioidarthritis DNAJC17.e 2 to 527 2 to 527 exact capped   526/526
(100 %)
1 diff
(99.9 %id)
BQ189574 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid DNAJC17.e 767 to 1358 1 to 592   tiling clone,   592/602
(98 %)
6 diff
(99.1 %id)
BF365688 nervous_tumor DNAJC17.e 830 to 948 1 to 119       119/119
(100 %)
1 diff
(99.2 %id)
AK308858 brain DNAJC17.f 1 to 881 1 to 881 S112G tiling clone,   881/881
(100 %)
1 diff
(99.9 %id)
DA228461 brain DNAJC17.f 2 to 554 2 to 554 S112G capped   553/553
(100 %)
1 diff
(99.9 %id)
DA118467 cerebellum DNAJC17.f 18 to 557 2 to 542 E51* tiling clone, capped   541/541
(100 %)
2 diff
(99.7 %id)
AK308659 cerebellum DNAJC17.g 1 to 792 1 to 792 exact tiling clone,   792/792
(100 %)
1 diff
(99.9 %id)
TI_149303660   DNAJC17.h-u 1 to 907 975 to 85   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 891/1058
(84 %)
0 diff
(100 %id)
BY796405 eye DNAJC17.h-u 36 to 555 1 to 520   tiling clone,   520/520
(100 %)
1 diff
(99.9 %id)
TI_154123627   DNAJC17.h-u 138 to 907 846 to 81   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 766/1038
(73 %)
0 diff
(100 %id)
AW005186 anaplastic oligodendroglioma, brain DNAJC17.h-u 146 to 895 752 to 1       752/752
(100 %)
18 diff
(97.7 %id)
BM981629 lung, Primary Lung Cystic Fibrosis EpithelialCells DNAJC17.h-u 168 to 907 746 to 7   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 740/746
(99 %)
0 diff
(100 %id)
AA706781 liver and spleen DNAJC17.h-u 373 to 895 522 to 1       522/522
(100 %)
1 diff
(99.9 %id)
AI417429 anaplastic oligodendroglioma, brain DNAJC17.h-u 386 to 895 510 to 1       510/510
(100 %)
0 diff
(100 %id)
BE247769 leukopheresis DNAJC17.h-u 485 to 898 416 to 2       415/416
(99 %)
0 diff
(100 %id)
T15561   DNAJC17.h-u 501 to 898 404 to 1       404/489
(82 %)
11 diff
(97.8 %id)
AA778465   DNAJC17.h-u 600 to 901 302 to 1       302/302
(100 %)
0 diff
(100 %id)
AI695214 Kidney DNAJC17.h-u 626 to 898 275 to 1       275/275
(100 %)
2 diff
(99.3 %id)
BQ346615 nervous_tumor DNAJC17.h-u 650 to 1258 1 to 606   tiling clone,   606/617
(98 %)
11 diff
(98.3 %id)
BQ712057 Spleen DNAJC17.h-u 971 to 1752 9 to 797   tiling clone,   789/987
(79 %)
15 diff
(98.5 %id)
BQ707386 Spleen DNAJC17.h-u 973 to 1652 1 to 693   tiling clone,   693/970
(71 %)
27 diff
(97.3 %id)
BM824664 Ascites, stomach DNAJC17.i 1 to 507 1 to 507 exact tiling clone,   507/507
(100 %)
0 diff
(100 %id)
DB212360 trachea DNAJC17.j 1 to 461 2 to 462 exact tiling clone, capped   461/461
(100 %)
0 diff
(100 %id)
DB217854 trachea DNAJC17.j 25 to 367 2 to 344   capped   343/344
(99 %)
2 diff
(99.5 %id)
BF851224 lung_normal DNAJC17.k 1 to 456 459 to 3 exact tiling clone, Submitted on the opposite strand 457/459
(99 %)
2 diff
(99.6 %id)
BF326497 breast_normal DNAJC17.k 22 to 271 251 to 1       251/257
(97 %)
7 diff
(97.3 %id)
BF326490 breast_normal DNAJC17.k 27 to 271 12 to 257       246/257
(95 %)
7 diff
(97.3 %id)
BF855495 prostate_normal Gene DNAJC17, variant not shown              
BF884006 lung_tumor Gene DNAJC17, variant not shown              
DB298395 cerebellum Gene DNAJC17, variant not shown              
DA092481 cerebellum Gene DNAJC17, variant not shown       capped      
DA094762 cerebellum Gene DNAJC17, variant not shown       capped Suspected internal deletion, this clone was ignored    
BX485947   Gene DNAJC17, variant not shown              
AI368044   Gene DNAJC17, variant not shown         This clone was ignored    
BF112073 pooled Gene DNAJC17, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C