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Gene ARHGEF10LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
301 supporting clones for gene ARHGEF10L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB046846   .a 1 to 4487 1 to 4489 W991R I1219V tiling clone, available from KIAA,   4489/4489
(100 %)
7 diff
(99.9 %id)
NM_018125.3   .a 1 to 4500 1 to 4500 W991R RefSeq,   4500/4502
(99 %)
6 diff
(99.9 %id)
DA402266 thalamus .a 38 to 558 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DB290902 uterus .a 75 to 660 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
BF852712 lung_normal .a 130 to 354 1 to 227       227/232
(97 %)
5 diff
(97.9 %id)
DA042438 bladder .a 271 to 758 2 to 489   capped   488/488
(100 %)
3 diff
(99.4 %id)
AW854568 colon .a 311 to 508 13 to 211       199/221
(90 %)
13 diff
(94.2 %id)
TI_57221398   .a 680 to 1436 65 to 820       756/821
(92 %)
11 diff
(98.7 %id)
BI758047 brain .a 681 to 1436 1 to 755       755/756
(99 %)
6 diff
(99.3 %id)
DA325886 hippocampus .a 872 to 1427 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
TI_1320130331   .a 922 to 1681 804 to 45       760/804
(94 %)
17 diff
(97.9 %id)
DA098168 cerebellum .a 948 to 1479 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
TI_2194578848   .a 949 to 1359 442 to 31       412/442
(93 %)
0 diff
(100 %id)
TI_2194579164   .a 985 to 1720 760 to 24       737/765
(96 %)
10 diff
(98.7 %id)
DB156061 thymus .a 1044 to 1631 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
CN414851 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1045 to 1417 8 to 380       373/380
(98 %)
7 diff
(98.2 %id)
TI_2194579236   .a 1138 to 1726 606 to 18       589/607
(97 %)
10 diff
(98.4 %id)
DR001368 fetal brain .a 1148 to 1792 9 to 653       645/653
(98 %)
9 diff
(98.7 %id)
DA120328 cerebellum .a 1171 to 1722 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
TI_1320132360   .a 1180 to 1721 566 to 25       542/566
(95 %)
11 diff
(98.1 %id)
CO248451 Chondrosarcoma Lung Metastasis cell lines, lung .a 1238 to 1746 47 to 553       507/761
(66 %)
18 diff
(97.7 %id)
DA640048 Liver .a 1254 to 1763 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
CD628990   .a 1289 to 1732 449 to 4       446/449
(99 %)
0 diff
(100 %id)
BC080596 Kidney, renal cell adenocarcinoma .a 1338 to 4147 1 to 2811   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 2811/2811
(100 %)
5 diff
(99.9 %id)
TI_1320129464   .a 1359 to 2396 170 to 1190       1026/1068
(96 %)
40 diff
(96.3 %id)
DA094327 cerebellum .a 1360 to 1890 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DN997640 breast cancer, Mammary gland (cancer tissue) .a 1400 to 2026 1 to 627       627/629
(99 %)
6 diff
(99.1 %id)
TI_2194579242   .a 1479 to 2235 760 to 3       758/763
(99 %)
2 diff
(99.8 %id)
DA385818 thalamus .a 1530 to 2136 2 to 608   capped   607/607
(100 %)
1 diff
(99.9 %id)
BP330815 rectum .a 1569 to 2153 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
TI_1320129465   .a 1585 to 2642 1 to 1056       1056/1217
(86 %)
10 diff
(99.2 %id)
CU455348 epidermis .a 1610 to 2228 15 to 633       619/633
(97 %)
6 diff
(99.1 %id)
CU457088 epidermis .a 1610 to 2086 15 to 491       477/494
(96 %)
12 diff
(97.6 %id)
CU455821 epidermis .a 1745 to 2389 648 to 4     Submitted on the opposite strand 645/648
(99 %)
2 diff
(99.7 %id)
TI_2194578855   .a 1760 to 2554 804 to 6       799/804
(99 %)
8 diff
(99.1 %id)
TI_1320129466   .a 1890 to 3020 41 to 1163       1123/1202
(93 %)
14 diff
(98.9 %id)
BI035847 nervous_tumor .a 1916 to 2091 182 to 7       176/182
(96 %)
0 diff
(100 %id)
TI_2194578846   .a 1929 to 2199 318 to 46       273/318
(85 %)
2 diff
(99.4 %id)
CD675442 eye, lens .a 1942 to 2653 1 to 712       712/712
(100 %)
0 diff
(100 %id)
DA792226 brain .a 1944 to 2523 2 to 583   capped   582/584
(99 %)
4 diff
(99.4 %id)
DA488628 brain .a 1945 to 2517 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB464168.
matches multiple genes
hippocampus .a 1981 to 2453 1 to 474     also hits gene skukubo 474/474
(100 %)
7 diff
(98.6 %id)
TI_2194579240   .a 1994 to 2865 882 to 12       871/889
(97 %)
8 diff
(99.2 %id)
BC115368 PCR rescued clones .a 1997 to 2578 588 to 7     Submitted on the opposite strand 582/589
(98 %)
1 diff
(99.9 %id)
TI_2194578853   .a 2028 to 2823 802 to 9       794/802
(99 %)
1 diff
(99.9 %id)
BE780971 eye, retinoblastoma .a 2061 to 2822 1 to 755       755/768
(98 %)
19 diff
(97.6 %id)
DA956076 Spleen .a 2090 to 2631 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
AA557743 Prostate, prostatic intraepithelial neoplasia - highgrade .a 2097 to 2376 282 to 3       280/289
(96 %)
0 diff
(100 %id)
TI_1320129467   .a 2201 to 3348 15 to 1156       1142/1255
(90 %)
20 diff
(98.5 %id)
CA487411   .a 2240 to 3129 1 to 889   tiling clone,   889/899
(98 %)
10 diff
(98.9 %id)
BQ945883 epidermoid carcinoma, cell line, lung .a 2251 to 3115 1 to 871       871/896
(97 %)
10 diff
(98.9 %id)
AW610051 stomach .a 2348 to 2840 524 to 24       501/524
(95 %)
17 diff
(96.8 %id)
DA667701 esophagus .a 2351 to 2883 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
TI_2194578851   .a 2352 to 3264 917 to 7       911/989
(92 %)
24 diff
(97.6 %id)
Z44984 brain, total brain .a 2438 to 2636 1 to 199       199/199
(100 %)
0 diff
(100 %id)
DA042689 bladder .a 2448 to 2984 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
TI_2194579239   .a 2532 to 3292 763 to 5       759/763
(99 %)
3 diff
(99.7 %id)
TI_2194579238   .a 2594 to 3388 802 to 8       795/802
(99 %)
3 diff
(99.7 %id)
BM853642 Ascites, stomach .a 2632 to 3068 1 to 438       438/438
(100 %)
2 diff
(99.6 %id)
Z43656 brain, total brain .a 2654 to 2933 1 to 281       281/281
(100 %)
1 diff
(99.7 %id)
AA970762 colon, colon tumor .a 2706 to 3125 1 to 420     Submitted on the opposite strand 420/420
(100 %)
6 diff
(98.6 %id)
BE867306 adenocarcinoma, colon .a 2802 to 3464 1 to 665       665/1062
(62 %)
15 diff
(98.6 %id)
BM742266 stomach .a 2819 to 3348 1 to 529       529/530
(99 %)
6 diff
(98.9 %id)
BM742806 stomach .a 2819 to 3431 1 to 609       609/609
(100 %)
5 diff
(99.2 %id)
BM744490 stomach .a 2819 to 3455 1 to 637       637/637
(100 %)
1 diff
(99.9 %id)
BM744511 stomach .a 2819 to 3405 1 to 588       588/592
(99 %)
5 diff
(99.2 %id)
BM745839 stomach .a 2819 to 3341 1 to 523       523/523
(100 %)
4 diff
(99.3 %id)
BE563281 adenocarcinoma, Pancreas .a 2846 to 3629 1 to 788       784/854
(91 %)
31 diff
(96.4 %id)
AI581684 brain, oligodendroglioma .a 2878 to 3234 1 to 357     Submitted on the opposite strand 357/357
(100 %)
1 diff
(99.8 %id)
AI460371 brain, oligodendroglioma .a 2901 to 3357 1 to 457     Submitted on the opposite strand 457/457
(100 %)
1 diff
(99.8 %id)
TI_2194578849   .a 2917 to 3387 483 to 12       472/483
(97 %)
2 diff
(99.6 %id)
BQ306253 breast .a 2965 to 3439 16 to 491       476/496
(95 %)
20 diff
(96.0 %id)
TI_2194579763   .a 3021 to 4101 1114 to 46     Submitted on the opposite strand 1069/1261
(84 %)
19 diff
(98.5 %id)
TI_1320129471   .a 3032 to 4102 15 to 1084       1070/1263
(84 %)
16 diff
(98.8 %id)
DA837736 placenta .a 3055 to 3600 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
BI755545 brain .a 3058 to 3884 1 to 835       835/835
(100 %)
16 diff
(98.1 %id)
TI_57218703   .a 3058 to 3884 31 to 865       835/865
(96 %)
20 diff
(97.7 %id)
TI_1320130297   .a 3084 to 3280 228 to 32       197/228
(86 %)
3 diff
(98.7 %id)
TI_1320130315   .a 3110 to 3748 640 to 2       639/640
(99 %)
11 diff
(98.3 %id)
TI_2194578856   .a 3126 to 3705 597 to 17       580/598
(96 %)
37 diff
(93.9 %id)
BM717137 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3145 to 3890 1 to 746       746/746
(100 %)
4 diff
(99.5 %id)
BE161373 head_neck .a 3162 to 3431 433 to 164     Submitted on the opposite strand 270/433
(62 %)
0 diff
(100 %id)
CF454616 peripheral nervous system .a 3174 to 3902 29 to 757       729/758
(96 %)
10 diff
(98.7 %id)
CD673128 eye, Iris .a 3182 to 3686 1 to 505       505/505
(100 %)
2 diff
(99.7 %id)
BM701370 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3197 to 3560 1 to 364       364/364
(100 %)
2 diff
(99.5 %id)
T09490   .a 3222 to 3465 36 to 279       244/279
(87 %)
10 diff
(96.5 %id)
H16915 whole brain .a 3222 to 3683 38 to 506     Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 469/510
(91 %)
33 diff
(93.6 %id)
BG476023 melanotic melanoma, skin .a 3223 to 3905 1 to 708       708/830
(85 %)
42 diff
(95.0 %id)
T09346   .a 3224 to 3504 42 to 324       283/328
(86 %)
10 diff
(97.0 %id)
BM824898 Ascites, stomach .a 3360 to 3896 1 to 536       536/536
(100 %)
6 diff
(98.9 %id)
BE536052 cervix .a 3383 to 3935 1 to 553       553/553
(100 %)
8 diff
(98.6 %id)
TI_59390848   .a 3399 to 4129 98 to 832       735/779
(94 %)
21 diff
(97.4 %id)
BM020069 astrocytoma grade IV, cell line, brain .a 3400 to 4129 1 to 734       734/778
(94 %)
21 diff
(97.4 %id)
BG698480 skin .a 3411 to 3840 1 to 430       430/430
(100 %)
5 diff
(98.9 %id)
BM794205 Ascites, stomach .a 3482 to 4107 1 to 626       626/626
(100 %)
9 diff
(98.6 %id)
BM727567 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3542 to 4022 1 to 482   fully sequenced, Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 482/482
(100 %)
3 diff
(99.4 %id)
CB163888 Liver .a 3576 to 4121 1 to 546       546/546
(100 %)
2 diff
(99.7 %id)
BF671784 muscle (skeletal) .a 3577 to 4327 1 to 745       745/999
(74 %)
33 diff
(96.7 %id)
TI_227714047   .a 3592 to 4487 996 to 106   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 891/998
(89 %)
27 diff
(97.3 %id)
TI_149299113   .a 3668 to 4487 918 to 110   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 809/916
(88 %)
18 diff
(98.1 %id)
TI_227715199   .a 3694 to 4487 900 to 114   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 787/973
(80 %)
14 diff
(98.6 %id)
CD675018 eye, lens .a 3720 to 4162 1 to 444       444/444
(100 %)
4 diff
(99.1 %id)
CB528729 Aveolar Macrophage, lung .a 3737 to 4487 769 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 751/751
(100 %)
1 diff
(99.9 %id)
CD365681 Alveolar Macrophage, lung .a 3765 to 4487 741 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 723/723
(100 %)
6 diff
(99.2 %id)
CN478990 Human Lung Epithelial cells, lung .a 3770 to 4487 738 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 720/720
(100 %)
4 diff
(99.5 %id)
CK818931 Islets of Langerhans, Pancreas .a 3782 to 4241 1 to 461       461/461
(100 %)
2 diff
(99.6 %id)
BG961592 colon .a 3785 to 4159 31 to 405       375/405
(92 %)
6 diff
(98.6 %id)
BM126329 Islets of Langerhans, Pancreas .a 3798 to 4308 1 to 512       512/512
(100 %)
2 diff
(99.7 %id)
BF038439 adenocarcinoma, ovary .a 3800 to 4488 1 to 682       682/878
(77 %)
36 diff
(95.9 %id)
CD364777 Alveolar Macrophage, lung .a 3802 to 4487 705 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 687/687
(100 %)
5 diff
(99.3 %id)
CA843116 Pancreas, Purified pancreatic islet .a 3806 to 4185 1 to 381   fully sequenced,   381/381
(100 %)
4 diff
(99.0 %id)
CA424371 cell lines, Chondrosarcoma .a 3818 to 4487 689 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 671/671
(100 %)
3 diff
(99.6 %id)
BM975509 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 3845 to 4487 662 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 644/644
(100 %)
1 diff
(99.9 %id)
BJ995506 hepatoblastoma .a 3869 to 4298 1 to 431       431/431
(100 %)
1 diff
(99.8 %id)
BU738615 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3876 to 4493 637 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 619/619
(100 %)
1 diff
(99.9 %id)
BI010098 leiomios .a 3943 to 4226 10 to 292       283/293
(96 %)
6 diff
(98.0 %id)
BX093888 whole brain .a 3964 to 4484 537 to 17       521/537
(97 %)
0 diff
(100 %id)
AI913628 Kidney .a 3965 to 4487 524 to 1       524/524
(100 %)
4 diff
(99.3 %id)
CK818930 Islets of Langerhans, Pancreas .a 3982 to 4493 524 to 12   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 513/513
(100 %)
2 diff
(99.7 %id)
BM681784 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3992 to 4487 515 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 497/497
(100 %)
1 diff
(99.8 %id)
AW054875 colon .a 4006 to 4488 483 to 1       483/483
(100 %)
12 diff
(97.6 %id)
AW455769 Kidney .a 4024 to 4494 21 to 491   tiling clone,   471/499
(94 %)
1 diff
(99.8 %id)
AI953258 anaplastic oligodendroglioma, brain .a 4040 to 4470 432 to 1       432/432
(100 %)
9 diff
(98.0 %id)
BF512779   .a 4047 to 4487 459 to 18   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 442/442
(100 %)
1 diff
(99.8 %id)
AI680075 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 4050 to 4493 462 to 18   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 445/445
(100 %)
3 diff
(99.4 %id)
AI373323 Kidney .a 4060 to 4488 436 to 7       430/436
(98 %)
0 diff
(100 %id)
H16805 whole brain .a 4061 to 4487 444 to 12   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 433/437
(99 %)
14 diff
(96.8 %id)
AW473443 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 4061 to 4487 428 to 1       428/428
(100 %)
1 diff
(99.8 %id)
BF509344   .a 4068 to 4487 438 to 18   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 421/421
(100 %)
1 diff
(99.8 %id)
AW662614 colon, moderately-differentiated adenocarcinoma .a 4081 to 4488 409 to 1       409/409
(100 %)
1 diff
(99.8 %id)
AA643721 colon, colon tumor RER+ .a 4101 to 4488 397 to 9       389/397
(97 %)
0 diff
(100 %id)
AI651053 Kidney .a 4122 to 4487 366 to 1       366/366
(100 %)
1 diff
(99.8 %id)
AI917570 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 4138 to 4488 352 to 1       352/352
(100 %)
4 diff
(98.9 %id)
AI565458 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 4138 to 4493 373 to 18   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 356/356
(100 %)
1 diff
(99.8 %id)
AI698350 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 4138 to 4444 307 to 1       307/307
(100 %)
0 diff
(100 %id)
AI950680 lung, two pooled squamous cell carcinomas .a 4147 to 4487 341 to 1       341/341
(100 %)
0 diff
(100 %id)
BM738742 Ascites, stomach .a 4148 to 4487 1 to 341   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 341/341
(100 %)
2 diff
(99.5 %id)
F02963 brain, total brain .a 4152 to 4487 335 to 1       335/335
(100 %)
1 diff
(99.8 %id)
AI700400 colon .a 4155 to 4445 292 to 2       291/299
(97 %)
0 diff
(100 %id)
CA843871 Pancreas, Purified pancreatic islet .a 4155 to 4491 338 to 1   fully sequenced,   338/338
(100 %)
5 diff
(98.6 %id)
AI697019 colon .a 4161 to 4470 1 to 310     Submitted on the opposite strand 310/310
(100 %)
0 diff
(100 %id)
AW007591 colon .a 4163 to 4471 1 to 309     Submitted on the opposite strand 309/309
(100 %)
7 diff
(97.8 %id)
AA992991   .a 4165 to 4488 329 to 8       322/329
(97 %)
0 diff
(100 %id)
R93327 liver and spleen .a 4166 to 4335 1 to 171     Submitted on the opposite strand 171/171
(100 %)
12 diff
(93.0 %id)
AA601933   .a 4174 to 4394 1 to 221       221/228
(96 %)
6 diff
(97.4 %id)
BI195977 brain, neuroblastoma .a 4178 to 4487 1 to 313   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 313/313
(100 %)
3 diff
(99.1 %id)
BQ326232 colon_normal .a 4202 to 4488 1 to 293       293/322
(90 %)
27 diff
(91.7 %id)
CD672081 eye, Iris .a 4221 to 4481 278 to 18   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 261/261
(100 %)
10 diff
(96.2 %id)
CD679096 eye, Trabecular meshwork .a 4224 to 4487 1 to 264   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 264/264
(100 %)
0 diff
(100 %id)
AI912227 carcinoid, lung .a 4236 to 4471 1 to 235     Submitted on the opposite strand 235/235
(100 %)
5 diff
(97.9 %id)
BF447312 Prostate .a 4256 to 4487 232 to 1       232/232
(100 %)
0 diff
(100 %id)
F03939 brain, total brain .a 4308 to 4487 180 to 1       180/180
(100 %)
0 diff
(100 %id)
DB240751 trachea .b 1 to 580 2 to 581   tiling clone, capped   580/580
(100 %)
4 diff
(99.4 %id)
DB224366 trachea .b 4 to 555 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DB227790 trachea .b 4 to 545 2 to 543   tiling clone, capped   542/542
(100 %)
1 diff
(99.9 %id)
DB235558 trachea .b 4 to 535 2 to 533   tiling clone, capped   532/532
(100 %)
1 diff
(99.9 %id)
DB235577 trachea .b 4 to 436 2 to 434   capped   433/435
(99 %)
2 diff
(99.6 %id)
DR004832 placenta .b 118 to 832 1 to 715       715/715
(100 %)
6 diff
(99.2 %id)
DA457264 tongue, tumor tissue .b 140 to 701 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA629716 Kidney .b 228 to 793 2 to 567   capped   566/566
(100 %)
9 diff
(98.5 %id)
NM_001011722.2   .b 265 to 4531 1 to 4267 W952R RefSeq,   4267/4269
(99 %)
6 diff
(99.9 %id)
BC117171 Colon, PCR rescued clones .b 275 to 4124 1 to 3850 W952R I1180V tiling clone,   3850/3850
(100 %)
5 diff
(99.9 %id)
BC143347 Colon, PCR rescued clones .b 275 to 4124 1 to 3850 W952R I1180V tiling clone,   3850/3850
(100 %)
4 diff
(99.9 %id)
BX951409   .c 1 to 627 1 to 629   tiling clone,   629/641
(98 %)
8 diff
(98.8 %id)
DQ139833   .c 196 to 4391 1 to 4198 S24P W947R I1175V tiling clone,   4198/4198
(100 %)
8 diff
(99.9 %id)
TI_1320129475   .c 747 to 1927 5 to 1196       1192/1263
(94 %)
27 diff
(97.9 %id)
CO246708 Chondrosarcoma Lung Metastasis cell lines, lung .c 1225 to 1969 8 to 739       732/828
(88 %)
17 diff
(98.0 %id)
BG423363 Kidney, renal cell adenocarcinoma .c 1258 to 1959 1 to 714   available from MGC,   714/903
(79 %)
18 diff
(98.1 %id)
CO248384 Chondrosarcoma Lung Metastasis cell lines, lung .c 1360 to 2060 47 to 745       699/745
(93 %)
14 diff
(98.2 %id)
BC065561 Eye, retinoblastoma .c 1403 to 4391 1 to 2990   available from MGC, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 2990/2990
(100 %)
5 diff
(99.9 %id)
BU154066 eye, retinoblastoma .c 1404 to 2302 1 to 910   available from MGC,   910/943
(96 %)
23 diff
(97.6 %id)
AU127232   .c 1448 to 1961 2 to 514   capped   513/513
(100 %)
2 diff
(99.7 %id)
CN365456 embryonic stem cells, cell lines H1, H7, andH9 .c 1455 to 2146 1 to 694       694/694
(100 %)
4 diff
(99.5 %id)
DA947287 Spleen .c 1688 to 2248 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA792024 brain .c 1698 to 1954 2 to 258   capped   257/257
(100 %)
0 diff
(100 %id)
BF527024 anaplastic oligodendroglioma with 1p/19qloss, brain .c 1723 to 2459 1 to 741       649/836
(77 %)
31 diff
(96.3 %id)
DA289177 hippocampus .c 1765 to 2284 2 to 523   capped, AAA   522/536
(97 %)
8 diff
(98.6 %id)
AU149885   .c 3880 to 4391 513 to 1   tiling clone,   513/587
(87 %)
13 diff
(97.8 %id)
AK311076 uterus .d 1 to 3593 2 to 3594 W952R tiling clone,   3594/3594
(100 %)
8 diff
(99.8 %id)
TI_2194576687   .d 52 to 1158 61 to 1156     Submitted on the opposite strand 1096/1231
(89 %)
25 diff
(98.0 %id)
TI_2194579765   .d 52 to 1174 64 to 1169     Submitted on the opposite strand 1106/1240
(89 %)
27 diff
(97.9 %id)
TI_2194575413   .d 229 to 1386 10 to 1163       1154/1241
(92 %)
13 diff
(99.0 %id)
BQ900427 eye, retinoblastoma .d 314 to 802 8 to 496       489/1230
(39 %)
18 diff
(98.6 %id)
DC334731 hippocampus .d 441 to 952 1 to 512       512/512
(100 %)
0 diff
(100 %id)
DC416349 trachea .d 475 to 1040 1 to 568       568/568
(100 %)
3 diff
(99.5 %id)
CD628991   .d 576 to 1170 1 to 596       596/605
(98 %)
14 diff
(97.7 %id)
BG951505 colon .d 587 to 861 272 to 3       270/275
(98 %)
1 diff
(99.7 %id)
BP421924 small intestine .d 636 to 1149 1 to 513     Submitted on the opposite strand 513/513
(100 %)
1 diff
(99.9 %id)
BX100887 liver and spleen .d 3251 to 3947 1 to 696   tiling clone,   696/696
(100 %)
1 diff
(99.9 %id)
T86808 liver and spleen .d 3251 to 3716 1 to 478       478/482
(99 %)
20 diff
(95.9 %id)
BF196924 pooled .d 3843 to 4404 562 to 1   tiling clone,   562/562
(100 %)
3 diff
(99.5 %id)
AW135554   .d 4044 to 4405 379 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 362/362
(100 %)
0 diff
(100 %id)
T86712 liver and spleen .d 4119 to 4400 280 to 1       280/290
(96 %)
4 diff
(98.7 %id)
AK126877 amygdala .e 1 to 4584 2 to 4586 S188P W752R I980V tiling clone, available from FLJ,   4586/4586
(100 %)
8 diff
(99.9 %id)
DA192247 amygdala .e 1 to 595 2 to 597   capped   596/596
(100 %)
3 diff
(99.5 %id)
DB303409 amygdala .e 4049 to 4584 537 to 1   tiling clone,   537/537
(100 %)
1 diff
(99.9 %id)
AK092020   .f 1 to 3471 5 to 3476 R634* tiling clone, available from FLJ,   3476/3476
(100 %)
4 diff
(99.9 %id)
AX747316   .f 1 to 3471 5 to 3476 R634*     3476/3476
(100 %)
4 diff
(99.9 %id)
DA649521   .f 1 to 533 5 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA661781   .f 1 to 330 5 to 334   capped   333/333
(100 %)
0 diff
(100 %id)
DA990397 synovial membrane tissue from rheumatioidarthritis .f 25 to 549 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA994641 synovial membrane tissue from rheumatioidarthritis .f 25 to 558 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
CB960344 Human Placenta, placenta .f 31 to 515 28 to 523       496/801
(61 %)
17 diff
(97.9 %id)
DA654358   .f 32 to 571 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA992631 synovial membrane tissue from rheumatioidarthritis .f 32 to 568 2 to 539   capped   538/544
(98 %)
3 diff
(99.5 %id)
DB221928 trachea .f 35 to 572 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DB061224 testis .f 59 to 512 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DA862120 placenta .f 65 to 572 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
DB284544 uterus .f 65 to 540 2 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
DB321651   .f 2930 to 3471 543 to 1   tiling clone,   543/543
(100 %)
2 diff
(99.7 %id)
DC380433 placenta .g 1 to 558 1 to 558   tiling clone,   558/558
(100 %)
0 diff
(100 %id)
DC426451 placenta .g 1859 to 2428 571 to 1   tiling clone,   571/571
(100 %)
1 diff
(99.9 %id)
DC307641 cerebellum .h 1 to 552 1 to 552   tiling clone,   552/552
(100 %)
0 diff
(100 %id)
DC317581 amygdala .h 6 to 525 1 to 521       521/521
(100 %)
2 diff
(99.7 %id)
CN365458 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 476 to 1118 1 to 642   tiling clone,   642/642
(100 %)
7 diff
(99.0 %id)
AK001383   .h 964 to 3982 1 to 3019   tiling clone, available from FLJ,   3019/3019
(100 %)
7 diff
(99.8 %id)
DA777613 brain .i 1 to 580 2 to 582   tiling clone, capped   581/581
(100 %)
2 diff
(99.7 %id)
CA394245 eye, RPE/choroid .i 275 to 756 1 to 482   tiling clone,   482/482
(100 %)
0 diff
(100 %id)
DB326067 brain .i 2113 to 2666 555 to 1   tiling clone,   555/555
(100 %)
1 diff
(99.9 %id)
DA754315   .j 1 to 471 2 to 473   tiling clone, capped   472/472
(100 %)
2 diff
(99.6 %id)
AK300174 placenta .j 48 to 2054 1 to 2007   tiling clone,   2007/2007
(100 %)
0 diff
(100 %id)
BM549808 leukocyte .k 1 to 794 16 to 819   tiling clone,   804/1107
(72 %)
21 diff
(98.2 %id)
BC111058 Blood, adult leukocytes .k 5 to 4924 1 to 4920 exact tiling clone, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 4920/4920
(100 %)
3 diff
(100.0 %id)
CV385337 breast_normal .k 75 to 462 413 to 28     Submitted on the opposite strand 386/413
(93 %)
0 diff
(100 %id)
CN365457 embryonic stem cells, cell lines H1, H7, andH9 .k 1555 to 2022 1 to 468       468/468
(100 %)
0 diff
(100 %id)
DA124571 cerebellum .k 1623 to 2156 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
CV397097 nervous_normal .l 1 to 371 383 to -3     Submitted on the opposite strand 379/383
(98 %)
0 diff
(100 %id)
DA104651 cerebellum .l 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
3 diff
(99.5 %id)
AA350680 brain .l 203 to 470 1 to 271       271/274
(98 %)
6 diff
(97.9 %id)
AW953279   .l 203 to 807 11 to 615   tiling clone,   605/615
(98 %)
6 diff
(99.1 %id)
F06121.
matches multiple genes
brain, total brain .l 203 to 483 1 to 281     also hits gene MYH10 281/281
(100 %)
3 diff
(99.0 %id)
H09408 whole brain .l 217 to 731 1 to 531       531/537
(98 %)
29 diff
(94.6 %id)
BG977548 colon_ins .l 314 to 742 437 to 11   tiling clone,   427/437
(97 %)
0 diff
(100 %id)
DA093213 cerebellum .l 394 to 853 2 to 461   tiling clone, capped   460/460
(100 %)
3 diff
(99.4 %id)
AA682440 liver and spleen .l 739 to 1216 504 to 28   tiling clone, AAA   477/493
(96 %)
0 diff
(100 %id)
BF917153 uterus_tumor .l 873 to 1339 18 to 484   tiling clone,   467/484
(96 %)
6 diff
(98.8 %id)
BI766539 pooled lung and spleen .l 900 to 1518 1 to 618       618/618
(100 %)
13 diff
(97.9 %id)
TI_57177496   .l 902 to 1518 35 to 650       616/650
(94 %)
6 diff
(99.1 %id)
BF736633 bladder_tumor .l 948 to 1226 25 to 302       278/302
(92 %)
6 diff
(98.1 %id)
AK123471 thalamus .l 1281 to 3541 1 to 2262 Y4H I243V tiling clone, available from FLJ,   2262/2262
(100 %)
6 diff
(99.8 %id)
DA372132 thalamus .l 1282 to 1830 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
BX485676   .l 1543 to 2117 1 to 575   tiling clone, Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 575/575
(100 %)
3 diff
(99.5 %id)
AW861173 colon .l 1545 to 2056 1 to 511       511/511
(100 %)
13 diff
(97.5 %id)
AW856895 colon .l 1555 to 2054 1 to 501       501/501
(100 %)
6 diff
(98.9 %id)
BX485677   .l 3015 to 3535 539 to 19   AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 521/521
(100 %)
2 diff
(99.7 %id)
DB310942 thalamus .l 3026 to 3541 517 to 1   tiling clone,   517/517
(100 %)
1 diff
(99.9 %id)
DA468685   .m 1 to 541 8 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA995922 synovial membrane tissue from rheumatioidarthritis .m 1 to 531 8 to 541   capped   540/540
(100 %)
3 diff
(99.5 %id)
DA619911   .m 1 to 596 7 to 602   tiling clone, capped   601/601
(100 %)
0 diff
(100 %id)
DA332687 hippocampus .m 1 to 512 5 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
DB275861 uterus .m 1 to 574 5 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB286566 uterus .m 1 to 545 5 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA246808 brain .m 1 to 588 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA992143 synovial membrane tissue from rheumatioidarthritis .m 1 to 498 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA863746 placenta .m 17 to 593 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA995613 synovial membrane tissue from rheumatioidarthritis .m 25 to 596 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA990516 synovial membrane tissue from rheumatioidarthritis .m 27 to 595 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DC381331 placenta .m 31 to 627 1 to 597       597/597
(100 %)
0 diff
(100 %id)
DA660338   .m 32 to 588 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA976052 synovial membrane tissue from rheumatioidarthritis .m 32 to 590 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA995002 synovial membrane tissue from rheumatioidarthritis .m 38 to 586 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DC318312 amygdala .m 47 to 632 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DA991988 synovial membrane tissue from rheumatioidarthritis .m 48 to 597 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB276554 uterus .m 48 to 590 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB283460 uterus .m 48 to 592 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DC349116   .m 56 to 605 1 to 550       550/550
(100 %)
3 diff
(99.5 %id)
DC428644   .m 59 to 632 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC295948 synovial membrane tissue from rheumatioidarthritis .m 59 to 605 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC318208 amygdala .m 64 to 669 1 to 606   tiling clone,   606/606
(100 %)
0 diff
(100 %id)
DC334974 hippocampus .m 65 to 622 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC296624 synovial membrane tissue from rheumatioidarthritis .m 94 to 641 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DC296584 synovial membrane tissue from rheumatioidarthritis .m 95 to 669 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC422247 uterus .m 95 to 669 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DA642441 Liver .n 1 to 631 2 to 632 exact tiling clone, capped   631/631
(100 %)
0 diff
(100 %id)
DA182382 amygdala .n 14 to 521 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
DA385807 thalamus .n 14 to 511 2 to 500   capped   499/499
(100 %)
1 diff
(99.8 %id)
DA095024 cerebellum .n 38 to 573 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
DC423513 uterus .o 1 to 545 1 to 545 exact tiling clone,   545/545
(100 %)
0 diff
(100 %id)
AK129959 Kidney .p 1 to 2778 1 to 2780 R32W tiling clone, available from FLJ,   2780/2780
(100 %)
12 diff
(99.6 %id)
DA381786 thalamus .p 733 to 1298 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DB311458 thalamus .p 2107 to 2627 522 to 1       522/522
(100 %)
3 diff
(99.5 %id)
AI986388 colon, colonic mucosa from 3 patients with Crohn'sdisease .p 2150 to 2628 479 to 1       479/479
(100 %)
3 diff
(99.4 %id)
CA310695 Human Lung Epithelial cells, lung .p 2183 to 2643 461 to 1       461/461
(100 %)
2 diff
(99.6 %id)
DB284284 uterus .q 1 to 536 2 to 537   tiling clone, capped   536/536
(100 %)
0 diff
(100 %id)
BF002440 colon, colon tumor, RER+ .q 522 to 1060 543 to 5   tiling clone,   539/543
(99 %)
0 diff
(100 %id)
BX496802 Liver .r 1 to 549 1 to 551   tiling clone,   551/551
(100 %)
7 diff
(98.8 %id)
DA392828 thalamus .r 423 to 1011 2 to 590   tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
AW896965 nervous_normal .r 944 to 1200 256 to 2   tiling clone,   255/256
(99 %)
0 diff
(100 %id)
AW897127 nervous_normal .r 944 to 1176 243 to 12   tiling clone,   232/243
(95 %)
0 diff
(100 %id)
BC029928 Skin, normal .s-u 1 to 1068 1 to 1068 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 1068/1068
(100 %)
0 diff
(100 %id)
BG739933 skin .s-u 2 to 863 1 to 866 N56K K57Q V58G S59E W60L ... available from MGC,   866/952
(90 %)
41 diff
(95.7 %id)
BF744887 breast .s-u 389 to 640 1 to 268       268/289
(92 %)
19 diff
(93.5 %id)
DA826557 pericardium .t 1 to 573 2 to 574 exact tiling clone, capped   573/573
(100 %)
0 diff
(100 %id)
BY797845 eye .u-u 1 to 585 1 to 585 exact tiling clone,   585/585
(100 %)
0 diff
(100 %id)
AK129606 rectum .va-u 1 to 1092 1 to 1092 exact tiling clone, available from FLJ,   1092/1092
(100 %)
11 diff
(99.0 %id)
DB188604 liver, tumor tissue .vb-u 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
2 diff
(99.7 %id)
TI_1320129473   .vc 1 to 511 1 to 511 I64V tiling clone,   511/1152
(44 %)
5 diff
(99.6 %id)
AK300264 placenta Gene ARHGEF10L, variant not shown         Suspected internal deletion, this clone was ignored    
TI_2194576306   Gene ARHGEF10L, variant not shown         Submitted on the opposite strand    
BF353675 head_neck Gene ARHGEF10L, variant not shown              
BF810746 colon_ins Gene ARHGEF10L, variant not shown         Submitted on the opposite strand    
BG946488 bladder_tumor Gene ARHGEF10L, variant not shown              
DA122654 cerebellum Gene ARHGEF10L, variant not shown       capped This clone was ignored    
CN267886 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene ARHGEF10L, variant not shown         This clone was ignored    
CV390736 head_neck Gene ARHGEF10L, variant not shown              
CV390753 head_neck Gene ARHGEF10L, variant not shown              
CV390806 head_neck Gene ARHGEF10L, variant not shown         Submitted on the opposite strand    
CV390854 head_neck Gene ARHGEF10L, variant not shown              
DB462777.
matches multiple genes
hippocampus Gene ARHGEF10L, variant not shown         This clone was ignored, also hits gene skukubo    
DB462777.
matches multiple genes
hippocampus Gene skukubo, variant not shown         This clone was ignored, also hits gene skukubo    
DB528254.
matches multiple genes
hippocampus Gene ARHGEF10L, variant not shown         This clone was ignored, also hits gene skukubo    
DB528254.
matches multiple genes
hippocampus Gene skukubo, variant not shown         This clone was ignored, also hits gene skukubo    
BC003073 Muscle, rhabdomyosarcoma Gene ARHGEF10L, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
BE019300 muscle, rhabdomyosarcoma Gene ARHGEF10L, variant not shown       available from MGC, Suspected internal deletion, this clone was ignored    
BE872181 adenocarcinoma, colon Gene ARHGEF10L, variant not shown         Suspected internal deletion, this clone was ignored    
DB213646 trachea Gene ARHGEF10L, variant not shown       capped      
DB348907 trachea Gene ARHGEF10L, variant not shown              
DB240903 trachea Gene ARHGEF10L, variant not shown       capped Suspected internal deletion, this clone was ignored    
BU608323 Human Lung Epithelial cells, lung Gene ARHGEF10L, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s-u, .t, .u-u, .va-u, .vb-u, .vc Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI