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Gene TBC1D10CTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
119 supporting clones for gene TBC1D10C back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR979868 T-Lymphocytes .a 1 to 634 1 to 634   tiling clone,   634/634
(100 %)
0 diff
(100 %id)
BE244704 leukopheresis .a 13 to 357 1 to 345       345/345
(100 %)
6 diff
(98.3 %id)
BQ084220 stomach .a 18 to 300 1 to 283       283/283
(100 %)
0 diff
(100 %id)
TI_57198623   .a 25 to 858 88 to 919       832/919
(90 %)
15 diff
(98.4 %id)
BC062999 Brain, Lung, Testis, adult, pooled whole .a 29 to 1732 1 to 1704 exact tiling clone, available from MGC, AAA   1704/1704
(100 %)
1 diff
(100.0 %id)
BG743861 blood, natural killer cells, cell line .a 29 to 849 1 to 818       818/818
(100 %)
4 diff
(99.6 %id)
BI821762 pooled brain, lung, testis .a 29 to 858 1 to 828       828/828
(100 %)
9 diff
(99.0 %id)
NM_198517.2   .a 29 to 1732 1 to 1704 exact RefSeq, AAA   1704/1704
(100 %)
1 diff
(100.0 %id)
CR610401 Placenta Cot 25-normalized .a 44 to 1702 1 to 1659 exact tiling clone,   1659/1659
(100 %)
0 diff
(100 %id)
BX360320 Placenta Cot 25-normalized .a 44 to 892 1 to 849       849/947
(89 %)
2 diff
(99.8 %id)
BX400226   .a 44 to 1016 1 to 968       968/968
(100 %)
9 diff
(99.1 %id)
DR006642 Spleen .a 44 to 633 11 to 600       590/600
(98 %)
6 diff
(99.0 %id)
BC036873 Pancreas, Spleen, adult pooled .a 46 to 1732 1 to 1687 exact available from MGC, AAA   1687/1687
(100 %)
2 diff
(99.9 %id)
BM918422 pooled pancreas and spleen .a 48 to 607 1 to 564       564/1158
(48 %)
25 diff
(97.9 %id)
BC022202 Blood, natural killer cell .a 57 to 1732 1 to 1676 exact available from MGC, AAA   1676/1676
(100 %)
2 diff
(99.9 %id)
TI_1948209491   .a 57 to 639 131 to 717       587/1304
(45 %)
21 diff
(98.4 %id)
EL734285 mixed .a 58 to 669 1 to 612       612/612
(100 %)
1 diff
(99.9 %id)
EL734937 mixed .a 58 to 658 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
BG744532 blood, natural killer cells, cell line .a 68 to 895 1 to 822   available from MGC,   822/831
(98 %)
13 diff
(98.5 %id)
BQ054011 blood, natural killer cells, cell line .a 87 to 777 1 to 697       697/1090
(63 %)
31 diff
(97.2 %id)
BM916985 blood, natural killer cells, cell line .a 107 to 1022 1 to 929       929/1098
(84 %)
20 diff
(98.2 %id)
BQ053995 blood, natural killer cells, cell line .a 107 to 868 1 to 771       771/1038
(74 %)
15 diff
(98.6 %id)
BM918191 blood, natural killer cells, cell line .a 301 to 1024 1 to 726       726/1090
(66 %)
16 diff
(98.6 %id)
BC127792 PCR rescued clones, C list .a 308 to 845 547 to 10     Submitted on the opposite strand 538/566
(95 %)
1 diff
(99.9 %id)
BF975720 B-cells, primary B-cells from tonsils (cell line) .a 409 to 1190 1 to 772       772/853
(90 %)
20 diff
(97.7 %id)
CR983586 T-Lymphocytes .a 499 to 1193 1 to 696       696/696
(100 %)
1 diff
(99.9 %id)
CR983562 T-Lymphocytes .a 738 to 1318 1 to 581       581/587
(98 %)
3 diff
(99.5 %id)
BM564103 blood, natural killer cells, cell line .a 833 to 1561 1 to 735       735/1138
(64 %)
15 diff
(98.7 %id)
BX414040 B cells (Ramos cell line) .a 845 to 1731 890 to 1       890/891
(99 %)
27 diff
(97.0 %id)
BI522071 pooled pancreas and spleen .a 872 to 1676 821 to 5       817/821
(99 %)
14 diff
(98.3 %id)
BQ646766 hepatocellular carcinoma, cell line, Liver .a 875 to 1377 1 to 504       504/1002
(50 %)
12 diff
(98.9 %id)
BQ646026 hepatocellular carcinoma, cell line, Liver .a 875 to 1348 1 to 477       477/891
(53 %)
13 diff
(98.6 %id)
BX360319 Placenta Cot 25-normalized .a 891 to 1694 811 to 9       803/980
(81 %)
5 diff
(99.5 %id)
BM918303 blood, natural killer cells, cell line .a 891 to 1323 24 to 457       434/1434
(30 %)
7 diff
(99.6 %id)
TI_1948209492   .a 906 to 1397 614 to 121       494/1347
(36 %)
23 diff
(98.3 %id)
BG744549 blood, natural killer cells, cell line .a 965 to 1684 719 to 2       718/719
(99 %)
2 diff
(99.8 %id)
BF975191 B-cells, primary B-cells from tonsils (cell line) .a 1022 to 1728 1 to 707       707/994
(71 %)
7 diff
(99.3 %id)
TI_154020435   .a 1051 to 1732 772 to 93   AAA   680/684
(99 %)
4 diff
(99.5 %id)
BU615963 Bone, Subchondral Bone .a 1091 to 1734 662 to 19   AAA   644/644
(100 %)
1 diff
(99.9 %id)
CA438429 lung, Metastatic Chondrosarcoma .a 1092 to 1732 656 to 17   AAA   640/640
(100 %)
2 diff
(99.7 %id)
BQ002765 Chondrosarcoma, Left Pelvis .a 1094 to 1732 655 to 17   AAA   639/639
(100 %)
3 diff
(99.6 %id)
BX099007 adenocarcinoma, Pancreas .a 1277 to 1732 470 to 15   AAA   456/456
(100 %)
2 diff
(99.6 %id)
AW008519 thymus, pooled .a 1277 to 1733 464 to 8       457/464
(98 %)
0 diff
(100 %id)
AI075269 B-cell, chronic lymphotic leukemia .a 1278 to 1733 457 to 3       455/457
(99 %)
0 diff
(100 %id)
BE675277 B-cell, chronic lymphotic leukemia .a 1293 to 1733 441 to 1       441/441
(100 %)
2 diff
(99.6 %id)
AI246193 follicular lymphoma, lymph node .a 1297 to 1733 437 to 1       437/437
(100 %)
2 diff
(99.6 %id)
AI913026 adenocarcinoma, Pancreas .a 1319 to 1733 415 to 3       413/415
(99 %)
0 diff
(100 %id)
AI056471 B-cell, chronic lymphotic leukemia .a 1322 to 1733 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
BP421279 small intestine .a 1323 to 1733 1 to 411     Submitted on the opposite strand 411/415
(99 %)
2 diff
(99.6 %id)
AI874234 ovary, tumor, 5 pooled (see description) .a 1346 to 1733 389 to 2       388/389
(99 %)
0 diff
(100 %id)
AA765476 germinal center B cell .a 1350 to 1691 342 to 1       342/342
(100 %)
6 diff
(98.3 %id)
AI358105 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1352 to 1732 404 to 24   AAA   381/381
(100 %)
8 diff
(98.0 %id)
AW512177 lymph node, lymphoma, follicular mixed small and largecell .a 1355 to 1732 378 to 1       378/378
(100 %)
1 diff
(99.8 %id)
AA807570 germinal center B-cells, tonsil .a 1356 to 1732 387 to 11   AAA   377/379
(99 %)
8 diff
(97.9 %id)
AW337415 lymph node, lymphoma, follicular mixed small and largecell .a 1357 to 1733 377 to 1       377/377
(100 %)
1 diff
(99.8 %id)
F31294 pectoral muscle (after mastectomy) .a 1362 to 1428 12 to 78       67/78
(85 %)
6 diff
(92.4 %id)
F37283 pectoral muscle (after mastectomy) .a 1364 to 1611 1 to 248       248/248
(100 %)
1 diff
(99.6 %id)
AI904292 breast .a 1384 to 1667 1 to 284       284/284
(100 %)
2 diff
(99.3 %id)
BE245755 leukopheresis .a 1385 to 1730 347 to 2       346/349
(99 %)
0 diff
(100 %id)
AI432234 lymph node, lymphoma, follicular mixed small and largecell .a 1398 to 1731 335 to 2       334/335
(99 %)
0 diff
(100 %id)
BM153425 leukopheresis .a 1400 to 1727 349 to 22   AAA   328/328
(100 %)
16 diff
(95.2 %id)
BM562380 leukocyte .b 1 to 843 18 to 863   tiling clone,   846/1121
(75 %)
26 diff
(97.7 %id)
BX363541   .b 37 to 566 1 to 539       539/767
(70 %)
19 diff
(97.6 %id)
TI_57165535   .b 45 to 729 27 to 731       705/890
(79 %)
34 diff
(96.2 %id)
BI837445 pooled pancreas and spleen .b 46 to 729 1 to 704       704/863
(81 %)
52 diff
(94.0 %id)
BI521228 pooled pancreas and spleen .b 58 to 732 1 to 691       687/843
(81 %)
30 diff
(96.5 %id)
BI521499 pooled pancreas and spleen .b 71 to 874 1 to 802   tiling clone,   806/802
(100 %)
13 diff
(98.4 %id)
CR995761 T-Lymphocytes .b 71 to 808 1 to 738       738/738
(100 %)
2 diff
(99.8 %id)
TI_57162728   .b 194 to 872 26 to 713       692/713
(97 %)
24 diff
(96.7 %id)
BX443220 B cells (Ramos cell line) .b 214 to 1118 1 to 904   tiling clone,   904/904
(100 %)
2 diff
(99.8 %id)
BX445715 B cells (Ramos cell line) .b 215 to 669 1 to 465       465/557
(83 %)
35 diff
(93.8 %id)
BG745254 Spleen .b 224 to 978 1 to 763       763/763
(100 %)
16 diff
(98.0 %id)
BI906461 leukocyte .b 258 to 1068 1 to 813       813/813
(100 %)
2 diff
(99.8 %id)
TI_57232402   .b 258 to 1068 30 to 842       813/842
(96 %)
8 diff
(99.1 %id)
BE676717 B-cell, chronic lymphotic leukemia .b 2986 to 3518 535 to 3   tiling clone,   533/535
(99 %)
0 diff
(100 %id)
AW175586 breast .b 3308 to 3463 200 to 45       156/200
(78 %)
0 diff
(100 %id)
AI471891 lymph node, lymphoma, follicular mixed small and largecell .b 3313 to 3517 205 to 1       205/205
(100 %)
0 diff
(100 %id)
BG745169 blood, natural killer cells, cell line .b 3358 to 3469 113 to 2   available from MGC,   112/113
(99 %)
0 diff
(100 %id)
BG746013 Spleen .b 3358 to 3462 110 to 5       106/110
(96 %)
0 diff
(100 %id)
BG271884 normal head/neck tissue .b 3386 to 3515 141 to 12   AAA   130/146
(89 %)
5 diff
(96.6 %id)
T24438.
matches multiple genes
soft tissue .b 3401 to 3518 118 to 3     also hits gene seyslyby 116/124
(93 %)
0 diff
(100 %id)
BC035630 Blood, adult leukocytes .c 1 to 1497 23 to 1519 exact tiling clone, available from MGC, AAA   1497/1497
(100 %)
2 diff
(99.9 %id)
TI_57236782   .c 8 to 614 57 to 660       604/660
(91 %)
7 diff
(99.0 %id)
BI908478 leukocyte .c 16 to 614 1 to 597       597/597
(100 %)
2 diff
(99.7 %id)
TI_57167865   .d 1 to 821 41 to 864 S222V T223Y S224L L225P G226W ...     831/864
(96 %)
20 diff
(97.7 %id)
BI837186 pooled pancreas and spleen .d 1 to 821 3 to 826 S222V T223Y S224L L225P G226W ... tiling clone,   826/826
(100 %)
14 diff
(98.4 %id)
BX282482 pooled pancreas and spleen .d 1 to 514 2 to 515       515/515
(100 %)
0 diff
(100 %id)
TI_57149325   .e 1 to 653 24 to 686   tiling clone,   670/687
(97 %)
21 diff
(97.0 %id)
BI761525 pooled colon, kidney, stomach .e 7 to 653 1 to 656       656/657
(99 %)
15 diff
(97.8 %id)
BX457130 thymus .e 28 to 819 1 to 791       791/791
(100 %)
10 diff
(98.8 %id)
BI833843 pooled pancreas and spleen .e 37 to 798 1 to 765   available from MGC,   765/766
(99 %)
9 diff
(98.9 %id)
TI_57166935   .e 37 to 805 30 to 802       773/884
(87 %)
19 diff
(97.9 %id)
TI_44159883   .e 94 to 844 29 to 797       767/791
(96 %)
45 diff
(94.4 %id)
BI524040 pooled lung and spleen .e 102 to 844 1 to 761   tiling clone,   759/762
(99 %)
40 diff
(94.8 %id)
CT002179 T-Lymphocytes .e 385 to 860 1 to 477   tiling clone,   477/479
(99 %)
2 diff
(99.6 %id)
CR978330 T-Lymphocytes .e 823 to 1378 1 to 557   tiling clone,   557/560
(99 %)
2 diff
(99.7 %id)
CR983269 T-Lymphocytes .e 862 to 1497 1 to 636       636/636
(100 %)
4 diff
(99.4 %id)
CR979583 T-Lymphocytes .e 862 to 1509 1 to 648   tiling clone,   648/648
(100 %)
6 diff
(99.1 %id)
BI909849 leukocyte .f 1 to 801 1 to 800 G158A S159P C160A R161G C162A ... tiling clone, available from MGC,   800/802
(99 %)
16 diff
(98.1 %id)
TI_57237987   .f 1 to 801 33 to 832 G158A S159P C160A R161G C162A ...     800/834
(95 %)
22 diff
(97.4 %id)
BM561466 blood, natural killer cells, cell line .g 1 to 726 1 to 728   tiling clone,   728/932
(78 %)
11 diff
(98.9 %id)
BQ052902 blood, natural killer cells, cell line .g 2 to 761 1 to 767 V201G E205D R220P E224Q V225G ... tiling clone,   767/1084
(70 %)
18 diff
(98.4 %id)
BM151996 leukopheresis .h -24 to 178 1 to 202       202/203
(99 %)
18 diff
(91.2 %id)
BI836425 pooled pancreas and spleen .h 1 to 554 34 to 599       574/599
(95 %)
21 diff
(96.5 %id)
CR988004 T-Lymphocytes .h 1 to 688 1 to 688   tiling clone,   688/689
(99 %)
3 diff
(99.6 %id)
BM919968 pooled pancreas and spleen .h 17 to 969 1 to 961       961/992
(96 %)
18 diff
(98.2 %id)
CR974879 T-Lymphocytes .h 538 to 1021 1 to 484   tiling clone,   484/484
(100 %)
0 diff
(100 %id)
BQ058264 lymph, lymphoma, cell line .i 1 to 759 1 to 762 L5W E7R D8T L9W V10C ... tiling clone,   762/1055
(72 %)
7 diff
(99.4 %id)
BE246327 leukopheresis .j 1 to 363 1 to 363   tiling clone,   363/365
(99 %)
10 diff
(97.3 %id)
BC047319 Pancreas, Spleen, adult pooled .j 36 to 1830 1 to 1795 exact tiling clone, available from MGC, AAA   1795/1795
(100 %)
1 diff
(100.0 %id)
BM007695 Spleen .j 36 to 758 1 to 728       730/929
(78 %)
23 diff
(97.6 %id)
TI_59382928   .j 36 to 758 57 to 784       730/929
(78 %)
23 diff
(97.6 %id)
BI838885 pooled pancreas and spleen .k 1 to 718 1 to 718 exact tiling clone,   718/718
(100 %)
2 diff
(99.8 %id)
TI_57165892   .k 1 to 718 1 to 718 exact     718/718
(100 %)
2 diff
(99.8 %id)
CR997633 T-Lymphocytes .l 1 to 619 1 to 619 R147X D156X tiling clone,   619/619
(100 %)
0 diff
(100 %id)
AK122585 Spleen .m 1 to 4480 1 to 4480 exact tiling clone, available from FLJ,   4480/4480
(100 %)
1 diff
(100.0 %id)
TI_57235168   .m 1725 to 2431 31 to 738       708/740
(95 %)
10 diff
(98.7 %id)
BI908915 leukocyte .m 1729 to 2431 1 to 704       704/706
(99 %)
10 diff
(98.6 %id)
AK126131 thymus .n-u 1 to 2384 2 to 2385 exact tiling clone, available from FLJ,   2385/2385
(100 %)
1 diff
(100.0 %id)
DB114398 thymus .n-u 1 to 416 2 to 417   capped   416/416
(100 %)
0 diff
(100 %id)
CR997050 T-Lymphocytes .n-u 37 to 408 1 to 374       374/376
(99 %)
6 diff
(98.5 %id)
DB343552 thymus .n-u 1819 to 2384 566 to 1       566/566
(100 %)
1 diff
(99.9 %id)
CR998697 T-Lymphocytes .o 1 to 732 1 to 732 exact tiling clone,   732/732
(100 %)
0 diff
(100 %id)
BI836766 pooled pancreas and spleen Gene TBC1D10C, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI