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Gene FKBP9LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
99 supporting clones for gene FKBP9L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX283612 Kidney, Wilms' tumor, cell line .a 1 to 491 1 to 491   tiling clone,   491/491
(100 %)
1 diff
(99.8 %id)
BM041005 Kidney, Wilms' tumor, cell line .a 1 to 488 1 to 488   fully sequenced,   488/488
(100 %)
2 diff
(99.6 %id)
NR_003949.1   .a 2 to 2437 1 to 2436 exact RefSeq, tiling clone, AAA   2436/2436
(100 %)
0 diff
(100 %id)
CU446952 epidermis .a 88 to 569 497 to 16     Submitted on the opposite strand 482/507
(95 %)
7 diff
(98.7 %id)
CU454824 epidermis .a 88 to 569 497 to 16     Submitted on the opposite strand 482/507
(95 %)
7 diff
(98.7 %id)
F01178 leg muscle, skeletal muscle .a 278 to 609 335 to 3       333/335
(99 %)
7 diff
(98.0 %id)
BF738776 bladder_tumor .a 326 to 491 1 to 165       165/169
(97 %)
7 diff
(95.9 %id)
BF807179 colon_ins .a 338 to 516 191 to 10     Submitted on the opposite strand 178/194
(91 %)
6 diff
(97.0 %id)
BF949315 nervous_normal .a 346 to 753 10 to 426       415/426
(97 %)
28 diff
(93.5 %id)
CU450140 epidermis .a 412 to 587 182 to 7     Submitted on the opposite strand 176/182
(96 %)
0 diff
(100 %id)
CV028479 mixed .a 435 to 862 1 to 428       428/436
(98 %)
12 diff
(97.3 %id)
BM041674 Kidney, Wilms' tumor, cell line .a 458 to 1106 652 to 4   fully sequenced,   649/652
(99 %)
1 diff
(99.9 %id)
BF764039 colon_est .a 558 to 900 15 to 358       344/358
(96 %)
19 diff
(94.7 %id)
BF997816 placenta_normal .a 595 to 839 32 to 275       244/302
(80 %)
8 diff
(97.4 %id)
DA812586 ovary, tumor tissue .a 641 to 1240 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
BQ318888 colon .a 945 to 1295 362 to 12       351/364
(96 %)
0 diff
(100 %id)
BQ319413 colon .a 945 to 1208 312 to 45       268/316
(84 %)
0 diff
(100 %id)
BQ325342 colon_ins .a 945 to 1249 314 to 1       314/318
(98 %)
0 diff
(100 %id)
BQ325444 colon_ins .a 945 to 1208 312 to 45       268/316
(84 %)
0 diff
(100 %id)
BF799653 colon_ins .a 1008 to 1403 415 to 20     Submitted on the opposite strand 396/420
(94 %)
0 diff
(100 %id)
T75218 whole brain .a 1062 to 1598 1 to 546       546/555
(98 %)
26 diff
(95.4 %id)
BG001431 placenta_normal .a 1092 to 1408 22 to 333       312/336
(92 %)
21 diff
(93.8 %id)
BE395801 endometrium, adenocarcinoma cell line, uterus .a 1108 to 1629 1 to 521       521/700
(74 %)
12 diff
(98.3 %id)
BG284052 adenocarcinoma, cell line, Prostate .a 1199 to 1629 1 to 429       429/1034
(41 %)
11 diff
(99.0 %id)
BI869467 adenocarcinoma, cell line, Liver .a 1244 to 1660 1 to 424       424/797
(53 %)
14 diff
(98.3 %id)
AA569056 liposarcoma .a 1257 to 1586 1 to 330       330/330
(100 %)
2 diff
(99.4 %id)
R76650 breast .a 1385 to 1850 1 to 491       491/496
(98 %)
11 diff
(97.8 %id)
CF618785 Pooled Chondrosarcoma Tumor cells .a 1385 to 1909 9 to 538       530/963
(55 %)
6 diff
(99.4 %id)
TI_159689417.
matches multiple genes
  .a 1598 to 2438 954 to 119     also hits gene FKBP9 836/1095
(76 %)
0 diff
(100 %id)
AL525931 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1604 to 2407 824 to 4       821/966
(84 %)
0 diff
(100 %id)
AV721971 hypothalamus .a 1610 to 2098 487 to 1   AAA Submitted on the opposite strand 487/487
(100 %)
0 diff
(100 %id)
BM668741 eye, Retina Foveal and Macular .a 1825 to 2437 629 to 17   AAA   613/625
(98 %)
11 diff
(98.3 %id)
H26670 breast .a 1834 to 2157 1 to 331     Submitted on the opposite strand 331/332
(99 %)
20 diff
(94.0 %id)
AA595020 normal prostate, Prostate .a 1834 to 2403 567 to 2       566/571
(99 %)
0 diff
(100 %id)
AA363350 ovary .a 1845 to 2110 1 to 266       266/266
(100 %)
1 diff
(99.7 %id)
W35266 heart .a 1847 to 2275 1 to 440       440/441
(99 %)
27 diff
(93.9 %id)
R43680 whole brain .a 1857 to 2408 571 to 13   AAA   559/562
(99 %)
34 diff
(94.0 %id)
CA432735 cell lines, Chondrosarcoma .a 1864 to 2437 592 to 19   AAA   574/574
(100 %)
1 diff
(99.9 %id)
DB371047 ovary, tumor tissue .a 1905 to 2437 531 to 1       531/597
(88 %)
13 diff
(97.9 %id)
AL516318.
matches multiple genes
brain, neuroblastoma, neuroblastoma cells .a 1909 to 2407 500 to 1     also hits gene SLC39A8 500/855
(58 %)
45 diff
(94.8 %id)
AA527335 colon .a 1921 to 2437 517 to 1       517/521
(99 %)
21 diff
(96.0 %id)
AA476808   .a 1931 to 2242 1 to 310       310/310
(100 %)
9 diff
(97.1 %id)
DB322695   .a 1932 to 2440 507 to 1       507/507
(100 %)
20 diff
(96.1 %id)
N57315 placenta .a 1936 to 2168 176 to 408       363/408
(88 %)
22 diff
(94.7 %id)
W94802 heart .a 1938 to 2389 1 to 455       455/455
(100 %)
9 diff
(98.1 %id)
AA040125 uterus .a 1938 to 2265 1 to 329       329/329
(100 %)
9 diff
(97.3 %id)
W70296 heart .a 1942 to 2284 1 to 344     Submitted on the opposite strand 344/345
(99 %)
10 diff
(97.2 %id)
AA041485 heart .a 1942 to 2116 1 to 173     Submitted on the opposite strand 173/173
(100 %)
4 diff
(97.7 %id)
BE467203 carcinoid, lung .a 1947 to 2384 1 to 438     Submitted on the opposite strand 438/438
(100 %)
4 diff
(99.1 %id)
BQ776226 Bone, Human Chondrosarcoma Cell Line .a 1953 to 2437 503 to 19   AAA   485/485
(100 %)
15 diff
(97.0 %id)
BM697309.
matches multiple genes
eye, lens .a 1955 to 2438 524 to 41     Submitted on the opposite strand, also hits gene FKBP9 484/524
(92 %)
0 diff
(100 %id)
BQ773554 Chondrosarcoma Cell line .a 1955 to 2437 501 to 19   AAA   483/483
(100 %)
15 diff
(96.9 %id)
AI031630 brain, glioblastoma (pooled) .a 1968 to 2437 497 to 28   AAA   470/470
(100 %)
5 diff
(99.0 %id)
AW768967 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 1969 to 2409 460 to 5       456/480
(95 %)
0 diff
(100 %id)
BE208140 adenocarcinoma cell line, ovary .a 1969 to 2441 479 to 7       473/479
(98 %)
0 diff
(100 %id)
R53232 whole brain .a 1971 to 2408 451 to 12   AAA   440/442
(99 %)
14 diff
(96.9 %id)
H44805 breast .a 1979 to 2405 426 to 1       426/428
(99 %)
14 diff
(96.8 %id)
AA229633   .a 1984 to 2115 1 to 128       128/128
(100 %)
9 diff
(93.0 %id)
AI040016.
matches multiple genes
senescent fibroblast .a 1986 to 2438 459 to 7     also hits gene FKBP9 453/459
(98 %)
0 diff
(100 %id)
T79859.
matches multiple genes
liver and spleen .a 1990 to 2437 466 to 12   AAA also hits gene FKBP9 455/492
(92 %)
10 diff
(98.0 %id)
AW608329 leiomios .a 1991 to 2254 40 to 303       264/303
(87 %)
6 diff
(98.1 %id)
R22901 placenta .a 2040 to 2419 393 to 1       393/393
(100 %)
23 diff
(94.2 %id)
W42936.
matches multiple genes
senescent fibroblast .a 2051 to 2257 16 to 222     also hits gene IL13RA1 207/249
(83 %)
8 diff
(96.8 %id)
W49661.
matches multiple genes
senescent fibroblast .a 2057 to 2438 386 to 5     also hits gene FKBP9 382/386
(98 %)
0 diff
(100 %id)
AW139857   .a 2066 to 2408 360 to 18   AAA   343/350
(98 %)
5 diff
(98.6 %id)
AA022613.
matches multiple genes
heart .a 2097 to 2408 327 to 16   AAA also hits gene FKBP9 312/312
(100 %)
5 diff
(98.4 %id)
H05524 whole brain .a 2098 to 2437 359 to 14   AAA   346/364
(95 %)
7 diff
(98.1 %id)
AW009466 colon .a 2109 to 2438 330 to 1       330/330
(100 %)
0 diff
(100 %id)
BI491936.
matches multiple genes
cochlea, ear .a 2121 to 2422 326 to 24   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base), also hits gene FKBP9 303/309
(98 %)
4 diff
(98.8 %id)
T63343 lung .a 2213 to 2409 196 to 1       196/196
(100 %)
5 diff
(97.5 %id)
AI720396 colon .a 2244 to 2440 223 to 26   AAA   198/198
(100 %)
14 diff
(93.0 %id)
AA987877.
matches multiple genes
Kidney, kidney tumor .a 2292 to 2408 117 to 1     also hits gene FKBP9 117/117
(100 %)
0 diff
(100 %id)
BQ364176 stomach .b 1 to 640 20 to 654   tiling clone,   635/663
(95 %)
14 diff
(97.9 %id)
BI036475 nervous_tumor .b 232 to 391 160 to 1       160/160
(100 %)
1 diff
(99.4 %id)
BX369645   .b 309 to 732 1 to 422   tiling clone,   422/456
(92 %)
15 diff
(96.8 %id)
CV349086 head_neck .b 324 to 895 582 to 10   tiling clone, Submitted on the opposite strand 573/582
(98 %)
28 diff
(95.2 %id)
TI_154195621   .b 453 to 973 23 to 552   tiling clone,   529/900
(58 %)
44 diff
(95.2 %id)
BF304721 muscle, rhabdomyosarcoma .c 1 to 617 1 to 603   tiling clone,   603/856
(70 %)
22 diff
(97.5 %id)
BF308395 muscle, rhabdomyosarcoma .c 1 to 658 1 to 650       650/940
(69 %)
22 diff
(97.7 %id)
BC011872 Muscle, rhabdomyosarcoma .c 2 to 2451 1 to 2451 exact tiling clone, available from MGC, AAA   2451/2451
(100 %)
1 diff
(100.0 %id)
NR_027342.1   .c 2 to 2451 1 to 2450 exact RefSeq, tiling clone, AAA   2450/2450
(100 %)
0 diff
(100 %id)
BE298844 muscle, rhabdomyosarcoma .c 20 to 690 1 to 669   available from MGC,   669/675
(99 %)
14 diff
(98.0 %id)
BF592283.
matches multiple genes
breast, lobullar carcinoma in situ .d 1 to 160 13 to 172   tiling clone, Submitted on the opposite strand, also hits gene FKBP9 160/172
(93 %)
6 diff
(96.6 %id)
TI_59392600   .d 49 to 612 81 to 645       565/565
(100 %)
1 diff
(99.9 %id)
BM014562 breast, mammary adenocarcinoma, cell line .d 50 to 612 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
NR_027339.1   .d 50 to 2589 1 to 2540 exact RefSeq, tiling clone, AAA   2540/2540
(100 %)
0 diff
(100 %id)
DA374924 thalamus .d 299 to 817 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
DA045764 bladder .e 1 to 527 2 to 529   tiling clone, capped   528/528
(100 %)
1 diff
(99.9 %id)
AK312981 bladder .e 316 to 910 1 to 595 exact     595/595
(100 %)
0 diff
(100 %id)
NR_027340.1   .e 316 to 2484 1 to 2169 exact RefSeq, tiling clone, AAA   2169/2169
(100 %)
0 diff
(100 %id)
DA041493 bladder .e 317 to 875 2 to 560   capped   559/561
(99 %)
1 diff
(99.9 %id)
AK289438 bladder .e 360 to 931 1 to 572 T115A     572/572
(100 %)
1 diff
(99.9 %id)
DA017281 adrenal gland .e 361 to 925 2 to 566 A127V capped   565/565
(100 %)
2 diff
(99.7 %id)
DA039863 bladder .e 361 to 941 2 to 582 T115A capped   581/581
(100 %)
2 diff
(99.7 %id)
DA042243 bladder .e 361 to 709 2 to 350   capped   349/349
(100 %)
0 diff
(100 %id)
DA042524 bladder .e 361 to 932 2 to 573 E26G capped   572/572
(100 %)
3 diff
(99.5 %id)
AA595993 larynx Gene FKBP9L, variant not shown         Suspected internal deletion, this clone was ignored    
AI302424 2 pooled tumors (clear cell type), Kidney Gene FKBP9L, variant not shown         Suspected internal deletion, this clone was ignored    
AI379696 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene FKBP9L, variant not shown         Suspected internal deletion, this clone was ignored    
AI497841 pooled Gene FKBP9L, variant not shown         Suspected internal deletion, this clone was ignored    
CF619415 Pooled Chondrosarcoma Tumor cells Gene FKBP9L, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C