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Gene FHITTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
109 supporting clones for gene FHIT back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA813783   .a 1 to 547 2 to 548 exact tiling clone, capped   547/551
(99 %)
4 diff
(99.3 %id)
AK289824 brain .a 255 to 1171 718 to 1634   tiling clone,   917/1634
(56 %)
9 diff
(99.5 %id)
BF823299 kidney_tumor .a 255 to 522 53 to 318       266/318
(83 %)
6 diff
(98.2 %id)
DB131203 thymus .a 255 to 677 131 to 553   capped   423/552
(76 %)
6 diff
(99.0 %id)
DB140963 thymus .a 440 to 997 2 to 559   tiling clone, capped   558/558
(100 %)
6 diff
(99.0 %id)
BF821031 kidney_tumor .a 789 to 1255 494 to 25   tiling clone, Submitted on the opposite strand 470/495
(94 %)
0 diff
(100 %id)
BF341997 brain, glioblastoma with EGFR amplification .a 926 to 1433 19 to 530   tiling clone,   512/933
(54 %)
11 diff
(98.9 %id)
BF821890 kidney_tumor .a 977 to 1163 198 to 11     Submitted on the opposite strand 188/202
(93 %)
0 diff
(100 %id)
R55559 whole brain .a 1914 to 2395 1 to 488   tiling clone,   488/489
(99 %)
10 diff
(98.0 %id)
BE067754 breast .a 2215 to 2674 467 to 10   tiling clone, Submitted on the opposite strand 458/470
(97 %)
0 diff
(100 %id)
BF331013 breast .a 2215 to 2674 480 to 21       460/483
(95 %)
0 diff
(100 %id)
BF331060 breast .a 2215 to 2674 462 to 2   tiling clone,   461/465
(99 %)
0 diff
(100 %id)
BF331061 breast .a 2215 to 2624 409 to 3       407/412
(98 %)
0 diff
(100 %id)
CV354521 breast .a 2215 to 2644 465 to 32   tiling clone, Submitted on the opposite strand 434/465
(93 %)
0 diff
(100 %id)
BF330992 breast .a 2267 to 2685 1 to 421   tiling clone,   421/425
(99 %)
14 diff
(96.8 %id)
BF744064 breast .a 2308 to 2688 381 to 3     Submitted on the opposite strand 379/381
(99 %)
0 diff
(100 %id)
BF746872 breast .a 2355 to 2685 1 to 328       328/332
(98 %)
25 diff
(92.5 %id)
CB999356 Pooled-Skin .a 2682 to 3146 1 to 466   tiling clone,   466/889
(52 %)
4 diff
(99.6 %id)
AI816933 2 pooled tumors (clear cell type), Kidney .a 2787 to 3268 486 to 4       483/486
(99 %)
0 diff
(100 %id)
DB523694 testis .a 2817 to 3266 1 to 451     Submitted on the opposite strand 451/452
(99 %)
2 diff
(99.6 %id)
AI215520 pooled .a 2818 to 3268 454 to 4   tiling clone,   451/459
(98 %)
0 diff
(100 %id)
DB507761 testis .a 2834 to 3266 1 to 434     Submitted on the opposite strand 434/435
(99 %)
2 diff
(99.6 %id)
AA972958 pooled .a 2910 to 3266 358 to 1       358/358
(100 %)
1 diff
(99.8 %id)
AW393211 stomach .a 2935 to 3275 342 to 2   tiling clone,   341/348
(97 %)
0 diff
(100 %id)
AW819291 stomach .a 2935 to 3270 347 to 13       335/353
(94 %)
0 diff
(100 %id)
AW819294 stomach .a 2935 to 3270 348 to 14       335/350
(95 %)
0 diff
(100 %id)
AW819296 stomach .a 2935 to 3269 346 to 14       333/352
(94 %)
0 diff
(100 %id)
AW819297 stomach .a 2935 to 3262 350 to 21       330/352
(93 %)
0 diff
(100 %id)
AW819298 stomach .a 2935 to 3270 348 to 12       337/359
(93 %)
0 diff
(100 %id)
AW819299 stomach .a 2935 to 3269 348 to 15       334/350
(95 %)
0 diff
(100 %id)
AW819300 stomach .a 2935 to 3269 348 to 15       334/354
(94 %)
0 diff
(100 %id)
R55319 whole brain .a 2939 to 3266 370 to 42   AAA   329/329
(100 %)
2 diff
(99.4 %id)
AW393197 stomach .a 2943 to 3223 290 to 5       286/290
(98 %)
0 diff
(100 %id)
AW819292 stomach .a 2944 to 3274 334 to 6       329/347
(94 %)
12 diff
(96.6 %id)
AW372718 breast .a 2964 to 3263 1 to 301       301/301
(100 %)
12 diff
(96.1 %id)
AU120876 whole embryo, mainly body .b 1 to 787 26 to 811 exact tiling clone, capped   786/810
(97 %)
17 diff
(98.0 %id)
DA267533 caudate nucleus .b 664 to 1204 2 to 542   tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
DB306894 caudate nucleus .b 1787 to 2335 550 to 1   tiling clone,   550/550
(100 %)
2 diff
(99.7 %id)
DB359714 whole embryo, mainly body .b 1800 to 2335 532 to 1   tiling clone,   532/534
(99 %)
8 diff
(98.6 %id)
DB131595 thymus .c 1 to 577 2 to 578 exact tiling clone, capped   577/579
(99 %)
1 diff
(99.9 %id)
AI278165 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1 to 415 421 to 2 R70P L71P S72L R74K G75R ... tiling clone,   418/424
(98 %)
0 diff
(100 %id)
AI803972 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1 to 415 422 to 3 R70P L71P S72L R74K G75R ...     418/510
(81 %)
0 diff
(100 %id)
AI493307 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1 to 415 422 to 3 M5L R70P L71P S72L R74K ...     418/483
(86 %)
2 diff
(99.6 %id)
AA256123 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 7 to 415 413 to 4   tiling clone,   410/413
(99 %)
0 diff
(100 %id)
AI468521 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 16 to 413 400 to 1       400/400
(100 %)
2 diff
(99.5 %id)
AI401445 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 68 to 415 351 to 4       348/523
(66 %)
2 diff
(99.7 %id)
BX498683 Liver .e 1 to 458 7 to 463 exact tiling clone,   463/463
(100 %)
6 diff
(98.8 %id)
BX498684 Liver .e 2946 to 3327 420 to 38   tiling clone, AAA   383/383
(100 %)
2 diff
(99.5 %id)
BG187124   .f 1 to 294 3 to 288 T2R R3X R4T T5F F6R ... tiling clone, AAA   288/288
(100 %)
14 diff
(95.2 %id)
R00843 liver and spleen .g 1 to 245 252 to 7 H13P D14* tiling clone,   246/309
(79 %)
1 diff
(99.7 %id)
BE246370 leukopheresis .h 1 to 444 1 to 444   tiling clone,   444/444
(100 %)
4 diff
(99.1 %id)
DB139846 thymus .h 72 to 607 2 to 537   tiling clone, capped   536/536
(100 %)
3 diff
(99.5 %id)
CV030498 mixed .h 452 to 696 104 to 348       245/610
(40 %)
7 diff
(98.9 %id)
DQ120721   .h 452 to 696 104 to 348       245/441
(55 %)
7 diff
(98.5 %id)
CA306530 Alveolar Macrophage, lung .h 452 to 1065 633 to 19 exact tiling clone, AAA   615/744
(82 %)
2 diff
(99.8 %id)
DB546439 hippocampus .h 626 to 1065 14 to 454     Submitted on the opposite strand 441/454
(97 %)
8 diff
(98.3 %id)
DB576289 hypothalamus .h 626 to 1065 51 to 491     Submitted on the opposite strand 441/491
(89 %)
12 diff
(97.6 %id)
AI338651 lung .h 626 to 1065 458 to 18   AAA   441/600
(73 %)
3 diff
(99.5 %id)
AI400094 pooled .h 626 to 1067 449 to 7   tiling clone,   443/562
(78 %)
5 diff
(99.2 %id)
NM_002012.2   .h 626 to 1065 649 to 1088   RefSeq, AAA   440/1088
(40 %)
6 diff
(99.5 %id)
U46922   .h 626 to 1065 640 to 1080   AAA   441/1080
(40 %)
7 diff
(99.4 %id)
BX095299 liver and spleen .h 689 to 992 459 to 763       305/763
(39 %)
7 diff
(99.1 %id)
R08283 liver and spleen .h 689 to 1063 388 to 6       383/441
(86 %)
15 diff
(96.6 %id)
R11068.
matches multiple genes
liver and spleen .h 689 to 1061 376 to 1     also hits gene PRRC1 376/413
(91 %)
6 diff
(98.6 %id)
BM665449 eye, optic nerve .h 689 to 1065 396 to 19   AAA   378/584
(64 %)
7 diff
(98.9 %id)
BG192972   .h 695 to 1065 1 to 371   AAA   371/371
(100 %)
4 diff
(99.0 %id)
T89183 liver and spleen .h 695 to 1058 366 to 2       365/366
(99 %)
1 diff
(99.8 %id)
AA918722 Kidney .h 695 to 1065 374 to 1       374/486
(76 %)
6 diff
(98.8 %id)
T91794 liver and spleen .h 742 to 1063 329 to 2       328/426
(76 %)
9 diff
(97.9 %id)
AW372683 breast .h 785 to 1061 1 to 281       281/282
(99 %)
20 diff
(93.0 %id)
R05964 liver and spleen .h 824 to 1067 252 to 5       248/265
(93 %)
0 diff
(100 %id)
AW819303 stomach .h 842 to 1042 19 to 218   tiling clone,   200/218
(91 %)
7 diff
(96.8 %id)
AI417763 Prostate .h 862 to 1065 204 to 1       204/204
(100 %)
1 diff
(99.6 %id)
BE247001 leukopheresis .h 895 to 1065 171 to 1       171/173
(98 %)
5 diff
(97.2 %id)
AA864207 Kidney, kidney tumor .h 924 to 1065 178 to 37   AAA   142/142
(100 %)
0 diff
(100 %id)
DA356708 subthalamic nucleus .h 1509 to 2061 2 to 555   tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
AK127931 Spleen .i 1 to 3451 3 to 3223 L27P tiling clone, available from FLJ, Suspected internal deletion 3223/3223
(100 %)
15 diff
(99.6 %id)
DB442847 testis .j 1 to 356 1 to 357       357/454
(78 %)
5 diff
(98.9 %id)
DB458200 testis .j 1 to 479 1 to 479   tiling clone,   479/479
(100 %)
0 diff
(100 %id)
BC032336 Colon, Kidney, Stomach, adult, whole pooled .j 469 to 1071 429 to 1032 exact tiling clone, available from MGC, AAA   604/1032
(58 %)
7 diff
(99.4 %id)
BX401968   .j 469 to 713 1 to 245   fully sequenced,   245/245
(100 %)
0 diff
(100 %id)
BI760505 pooled colon, kidney, stomach .j 469 to 950 429 to 914 A23G G24W D25R F26L H27S ...     486/914
(53 %)
16 diff
(98.3 %id)
AI245155 Kidney .j 635 to 1071 437 to 1       437/487
(89 %)
5 diff
(99.0 %id)
AI024929   .j 643 to 1073 433 to 3   tiling clone,   431/559
(77 %)
0 diff
(100 %id)
AI741386 pooled .j 643 to 1073 435 to 4       432/689
(62 %)
0 diff
(100 %id)
NM_001166243.1   .j 643 to 1071 649 to 1077   RefSeq, AAA   429/1077
(39 %)
6 diff
(99.5 %id)
BG188261   .j 697 to 1073 47 to 420       374/422
(88 %)
10 diff
(97.7 %id)
BG220939   .j 709 to 1071 1 to 363   AAA   363/363
(100 %)
9 diff
(97.6 %id)
BG186720   .j 710 to 1071 1 to 363   AAA   363/363
(100 %)
9 diff
(97.6 %id)
BG185116   .j 711 to 1071 1 to 361   AAA   361/361
(100 %)
9 diff
(97.6 %id)
BG188793   .j 711 to 1071 1 to 361   AAA   361/361
(100 %)
8 diff
(97.8 %id)
BG191924   .j 711 to 1071 1 to 361   AAA   361/361
(100 %)
5 diff
(98.7 %id)
BG199600   .j 711 to 1071 1 to 361   AAA   361/361
(100 %)
11 diff
(97.0 %id)
BG203219   .j 711 to 1071 1 to 361   AAA   361/361
(100 %)
8 diff
(97.8 %id)
BG211560   .j 711 to 1073 1 to 364       364/365
(99 %)
10 diff
(97.3 %id)
BG191397   .j 712 to 1071 1 to 360   AAA   360/360
(100 %)
5 diff
(98.7 %id)
BX385434   .j 712 to 1038 324 to 1   fully sequenced,   324/324
(100 %)
7 diff
(97.9 %id)
R50713 breast .j 712 to 1071 363 to 1       363/455
(79 %)
6 diff
(98.7 %id)
R53094 breast .j 712 to 1060 362 to 12       351/399
(87 %)
4 diff
(99.0 %id)
R86314 breast .j 712 to 1053 346 to 1       346/409
(84 %)
9 diff
(97.8 %id)
N35686 melanocyte .j 712 to 1073 368 to 4       365/439
(83 %)
1 diff
(99.8 %id)
AA621493 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 712 to 1069 363 to 5       359/363
(98 %)
1 diff
(99.8 %id)
AI582390 adenocarcinoma, Pancreas .j 712 to 1071 391 to 32   AAA   360/423
(85 %)
11 diff
(97.4 %id)
AW025706 pooled germ cell tumors .j 712 to 1073 366 to 4       363/435
(83 %)
4 diff
(99.1 %id)
BG108879 retina, Retinal Pigment Epithelium sheets .j 724 to 977 1 to 244       244/256
(95 %)
11 diff
(95.8 %id)
BG203702   .j 733 to 1071 27 to 362   AAA   336/362
(92 %)
13 diff
(96.5 %id)
CD102986 Pooled-Skin .k 1 to 657 1 to 663 exact tiling clone,   663/754
(87 %)
16 diff
(97.9 %id)
BM694710 eye, RPE and Choroid .k 28 to 434 1 to 408   fully sequenced,   408/408
(100 %)
1 diff
(99.8 %id)
BU731229 eye, RPE and Choroid .k 116 to 438 342 to 19   fully sequenced, AAA   324/324
(100 %)
1 diff
(99.7 %id)
DA151506 amygdala .k 180 to 748 2 to 570   tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
BX118904 pooled germ cell tumors .l 1 to 470 1 to 470 exact tiling clone,   470/470
(100 %)
2 diff
(99.6 %id)
AI633346 pooled germ cell tumors .l 87 to 508 422 to 1   tiling clone,   422/422
(100 %)
2 diff
(99.6 %id)
AW051648 Kidney .m-u 1 to 507 507 to 1 K14X tiling clone,   507/516
(98 %)
0 diff
(100 %id)
BG200628   .n 1 to 397 3 to 400 exact tiling clone, AAA   400/400
(100 %)
2 diff
(99.5 %id)
DA957236 Spleen Gene FHIT, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB334047 Spleen Gene FHIT, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI