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Gene FCER1ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene FCER1A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
X06948   .a 1 to 1171 1 to 1171 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1171/1171
(100 %)
5 diff
(99.6 %id)
NM_002001.2   .a 8 to 1171 1 to 1164 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1164/1164
(100 %)
0 diff
(100 %id)
BF677190 Prostate .a 73 to 696 1 to 636       636/818
(77 %)
39 diff
(95.3 %id)
J03605   .a 73 to 1153 1 to 1081 exact     1081/1081
(100 %)
1 diff
(100.0 %id)
BC015195 Prostate .a 74 to 1132 1 to 1059 V233A available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1059/1059
(100 %)
2 diff
(99.9 %id)
BF679057 Prostate .a 77 to 816 1 to 737       737/834
(88 %)
25 diff
(97.1 %id)
BG542554 lung .a 77 to 872 1 to 799       799/810
(98 %)
23 diff
(97.2 %id)
BG548515 lung .a 77 to 878 1 to 827       738/840
(87 %)
33 diff
(96.1 %id)
BC005912 Prostate .a 78 to 1132 1 to 1055 exact available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1055/1055
(100 %)
0 diff
(100 %id)
BF678252 Prostate .a 82 to 740 1 to 651       651/846
(76 %)
23 diff
(97.3 %id)
CV027476 mixed .a 107 to 730 1 to 624       624/624
(100 %)
0 diff
(100 %id)
CD696486 normal nasopharynx .a 122 to 336 1 to 221       221/221
(100 %)
9 diff
(96.0 %id)
TI_154115647   .a 251 to 1149 968 to 89   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 880/972
(90 %)
35 diff
(96.4 %id)
TI_154123561   .a 304 to 1153 934 to 88   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 847/960
(88 %)
18 diff
(98.2 %id)
TI_154006257   .a 309 to 1158 925 to 89   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 837/928
(90 %)
15 diff
(98.4 %id)
TI_154113159   .a 364 to 1160 879 to 91       789/1061
(74 %)
11 diff
(99.0 %id)
FN154652 breast carcinoma .a 398 to 495 97 to 1     Submitted on the opposite strand 97/97
(100 %)
2 diff
(98.0 %id)
BQ573778 Chondrosarcoma Grade II, Left Pelvis .a 403 to 1152 768 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 750/750
(100 %)
1 diff
(99.9 %id)
CA419024 Chondrosarcoma Grade II, Left Pelvis .a 460 to 1153 712 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 694/694
(100 %)
4 diff
(99.5 %id)
CA448745 Chondrosarcoma, Left Pelvis .a 464 to 1160 707 to 11       697/707
(98 %)
0 diff
(100 %id)
AW612525 Kidney .a 487 to 1154 669 to 1       669/669
(100 %)
11 diff
(98.4 %id)
FN080188 breast carcinoma .a 522 to 616 1 to 95       95/95
(100 %)
0 diff
(100 %id)
BM991911 Bone, Subchondral Bone .a 553 to 1160 615 to 8       608/615
(98 %)
1 diff
(99.9 %id)
BX110472 Prostate .a 571 to 1058 1 to 488       488/488
(100 %)
2 diff
(99.6 %id)
FN075724 breast carcinoma .a 610 to 712 1 to 104       104/104
(100 %)
2 diff
(98.1 %id)
AI685796 Prostate .a 610 to 1146 540 to 3       538/540
(99 %)
11 diff
(98.0 %id)
BF593204 Kidney .a 685 to 1149 466 to 1       466/479
(97 %)
12 diff
(97.5 %id)
BQ005218 Chondrosarcoma, Left Pelvis .a 697 to 1158 478 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 462/462
(100 %)
0 diff
(100 %id)
AI676097 Prostate .a 708 to 1153 446 to 1       446/446
(100 %)
3 diff
(99.4 %id)
AV757598 bone marrow .a 887 to 1153 85 to 351   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 267/276
(96 %)
6 diff
(97.9 %id)
AI765235 2 pooled tumors (clear cell type), Kidney .a 918 to 1155 264 to 27   AAA   238/249
(95 %)
0 diff
(100 %id)
BM966772 Islets of Langerhans, Pancreas .a 970 to 1160 1 to 191   AAA   191/220
(86 %)
4 diff
(98.2 %id)
CK823236 Islets of Langerhans, Pancreas .a 970 to 1160 1 to 191       191/259
(73 %)
5 diff
(98.1 %id)
FN113463 breast carcinoma .a 1031 to 1095 1 to 64       64/65
(98 %)
2 diff
(97.0 %id)
BG542157 lung .b 1 to 766 1 to 760 A7V F186L A187L V188W D189T ... tiling clone,   760/760
(100 %)
16 diff
(97.9 %id)
BF675157 Prostate .c-u 1 to 674 1 to 679   tiling clone, available from MGC,   679/890
(76 %)
30 diff
(96.7 %id)
BC015185 Prostate .c-u 2 to 2268 1 to 2267 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 2267/2269
(99 %)
2 diff
(100.0 %id)
DA126533 cerebellum .d 1 to 570 2 to 571 exact tiling clone, to resequence, capped   570/570
(100 %)
0 diff
(100 %id)
DB300851 cerebellum .d 1275 to 1799 525 to 1   tiling clone, to resequence,   525/525
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI