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Gene FBXO4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
128 supporting clones for gene FBXO4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK024075   .a 1 to 1506 2 to 1507 H349R tiling clone, available from FLJ,   1507/1507
(100 %)
1 diff
(100.0 %id)
BM906745 ovary (pool of 3) .a 1 to 478 12 to 489       479/1193
(40 %)
7 diff
(99.5 %id)
NM_012176.2   .a 1 to 1499 2 to 1500 exact RefSeq, AAA   1500/1500
(100 %)
0 diff
(100 %id)
AU143782   .a 1 to 808 2 to 810   capped   809/809
(100 %)
7 diff
(99.2 %id)
AV658043 corresponding non cancerous liver tissue .a 10 to 415 1 to 406     Submitted on the opposite strand 406/406
(100 %)
1 diff
(99.8 %id)
BM836387 myeloma .a 15 to 514 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
BG717672 testis .a 26 to 777 1 to 756       756/785
(96 %)
18 diff
(97.8 %id)
BE790066 large cell carcinoma, lung .a 31 to 694 1 to 684       624/689
(90 %)
47 diff
(93.2 %id)
BC048098 testis .a 32 to 1499 1 to 1468 exact tiling clone, available from MGC, AAA   1468/1468
(100 %)
0 diff
(100 %id)
BC040011 Pancreas, Spleen, adult pooled .a 39 to 1499 1 to 1461 exact available from MGC, AAA   1461/1461
(100 %)
0 diff
(100 %id)
BM918598 pooled pancreas and spleen .a 40 to 907 1 to 872   available from MGC,   872/1086
(80 %)
18 diff
(98.4 %id)
DR003520 hippocampus .a 40 to 546 1 to 508       508/508
(100 %)
8 diff
(98.5 %id)
DR006925 Spleen .a 41 to 633 1 to 593       593/593
(100 %)
6 diff
(99.0 %id)
DB484149 hypothalamus .a 51 to 472 1 to 426       426/426
(100 %)
10 diff
(97.7 %id)
CF265110 Brain glioblastoma .a 53 to 921 1 to 873       873/878
(99 %)
10 diff
(98.9 %id)
AF129534   .a 56 to 1495 1 to 1440 E41D D95N D120Y E122Q T132S ...     1440/1444
(99 %)
22 diff
(98.5 %id)
EL733999 mixed .a 56 to 693 1 to 636       636/636
(100 %)
2 diff
(99.7 %id)
AA280142 germinal center B cell .a 60 to 194 10 to 138       129/138
(93 %)
6 diff
(95.7 %id)
BI909205 leukocyte .a 60 to 113 1 to 53       53/53
(100 %)
1 diff
(98.2 %id)
BE784036 eye, retinoblastoma .a 61 to 777 1 to 718       718/842
(85 %)
10 diff
(98.9 %id)
TI_57149018   .a 62 to 879 31 to 851       821/853
(96 %)
13 diff
(98.5 %id)
BU192331 large cell carcinoma, lung .a 68 to 888 1 to 829       829/906
(91 %)
18 diff
(98.1 %id)
BM799980 eye, retinoblastoma .a 72 to 954 1 to 888       888/1109
(80 %)
21 diff
(98.2 %id)
CB995625 placenta, pre-eclamptic placenta .a 102 to 847 30 to 780       751/833
(90 %)
21 diff
(97.5 %id)
AA234839 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 137 to 372 80 to 319       282/319
(88 %)
19 diff
(94.1 %id)
AA295683 Pancreas .a 157 to 467 1 to 311       311/311
(100 %)
3 diff
(99.1 %id)
BG942675 blood .a 248 to 725 1 to 478       478/478
(100 %)
0 diff
(100 %id)
DA254472 caudate nucleus .a 261 to 834 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BF691677 melanotic melanoma, high MDR, skin .a 394 to 1079 1 to 680       680/774
(87 %)
31 diff
(96.0 %id)
BI222327 cervical carcinoma cell line, cervix .a 435 to 1007 1 to 573       573/573
(100 %)
0 diff
(100 %id)
CR749719 brain .a 483 to 1499 1 to 1017   available from DKFZ, AAA   1017/1017
(100 %)
0 diff
(100 %id)
FN170047 breast carcinoma .a 595 to 674 1 to 78       78/78
(100 %)
7 diff
(91.1 %id)
TI_149312423   .a 639 to 1499 925 to 83   AAA   847/925
(91 %)
29 diff
(96.9 %id)
AA150385 uterus .a 640 to 1031 1 to 392       392/392
(100 %)
0 diff
(100 %id)
CB851560 lung .a 786 to 1499 731 to 19   AAA   713/713
(100 %)
1 diff
(99.9 %id)
CA422039 Bone, Enchondroma cell line .a 814 to 1506 711 to 19   AAA   693/693
(100 %)
3 diff
(99.6 %id)
BQ300972 bladder_tumor .a 844 to 1304 461 to 1       461/461
(100 %)
1 diff
(99.8 %id)
BF589419 pooled .a 847 to 1406 560 to 1       560/560
(100 %)
0 diff
(100 %id)
CA440135 lung, Metastatic Chondrosarcoma .a 867 to 1506 653 to 12   AAA   642/642
(100 %)
3 diff
(99.6 %id)
BG168746 hypernephroma, cell line, Kidney .a 885 to 1508 13 to 638       626/661
(94 %)
19 diff
(97.2 %id)
AI808413 pooled .a 917 to 1406 489 to 1       489/489
(100 %)
8 diff
(98.4 %id)
AU160823   .a 951 to 1504 551 to 3       549/559
(98 %)
18 diff
(96.8 %id)
BM090733 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 970 to 1474 1 to 506       506/506
(100 %)
5 diff
(99.1 %id)
AI961240 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 978 to 1506 529 to 1       529/529
(100 %)
0 diff
(100 %id)
BQ004948 Chondrosarcoma, Left Pelvis .a 1018 to 1499 503 to 19   AAA   485/485
(100 %)
4 diff
(99.2 %id)
AI718802 aorta .a 1021 to 1506 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AA827821 germinal center B cell .a 1036 to 1499 491 to 28   AAA   464/464
(100 %)
1 diff
(99.8 %id)
AI572903 lymph node, lymphoma, follicular mixed small and largecell .a 1038 to 1499 461 to 1       461/462
(99 %)
1 diff
(99.8 %id)
BU533624 mixed (pool of 40 RNAs) .a 1050 to 1506 1 to 457   AAA   457/457
(100 %)
2 diff
(99.6 %id)
AI379116 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1060 to 1506 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AW262991 adenocarcinoma, Pancreas .a 1065 to 1499 435 to 1       435/439
(99 %)
0 diff
(100 %id)
BF222332 Prostate .a 1067 to 1509 443 to 1       443/443
(100 %)
5 diff
(98.9 %id)
DB553113 hypothalamus .a 1068 to 1506 1 to 439     Submitted on the opposite strand 439/439
(100 %)
3 diff
(99.4 %id)
CB241564 Human Lung Epithelial cells, lung .a 1083 to 1506 15 to 439   AAA Submitted on the opposite strand 425/425
(100 %)
5 diff
(98.9 %id)
DB543366 hippocampus .a 1084 to 1498 1 to 415     Submitted on the opposite strand 415/416
(99 %)
2 diff
(99.6 %id)
AA446001   .a 1092 to 1499 417 to 11   AAA   407/407
(100 %)
1 diff
(99.8 %id)
AI141317 brain, glioblastoma (pooled) .a 1113 to 1499 414 to 28   AAA   387/387
(100 %)
0 diff
(100 %id)
AA150283 uterus .a 1323 to 1508 189 to 4       186/189
(98 %)
0 diff
(100 %id)
NM_033484.2   .b 1 to 1726 2 to 1727 exact RefSeq, AAA   1727/1727
(100 %)
0 diff
(100 %id)
AF176703   .b 62 to 1726 1 to 1666   tiling clone, AAA   1666/1666
(100 %)
2 diff
(99.9 %id)
AW865930 stomach_normal .b 816 to 1425 1 to 606   tiling clone,   606/609
(99 %)
14 diff
(97.8 %id)
AW865917 stomach_normal .b 820 to 1452 640 to 8       633/644
(98 %)
0 diff
(100 %id)
AI381857 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1329 to 1717 402 to 11       392/402
(97 %)
0 diff
(100 %id)
BX643553   .b 1401 to 1966 1 to 566   tiling clone,   566/566
(100 %)
3 diff
(99.5 %id)
CR600197 Neuroblastoma Cot 25-normalized .c 1 to 1243 6 to 1248 exact tiling clone,   1248/1248
(100 %)
0 diff
(100 %id)
AL526846 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 86 to 681 91 to 687   fully sequenced,   597/687
(86 %)
19 diff
(97.3 %id)
AL526818 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 620 to 1243 623 to 1   fully sequenced,   623/623
(100 %)
9 diff
(98.6 %id)
BE220891 malignant melanoma, metastatic to lymphnode, skin .c 790 to 1281 494 to 3   tiling clone,   492/494
(99 %)
0 diff
(100 %id)
DB523843 testis .c 823 to 1279 1 to 457     Submitted on the opposite strand 457/457
(100 %)
1 diff
(99.8 %id)
AA954259 2 pooled tumors (clear cell type), Kidney .c 827 to 1281 456 to 2       455/456
(99 %)
0 diff
(100 %id)
DR977815 brain .c 894 to 1272 1 to 378   AAA Submitted on the opposite strand 378/378
(100 %)
7 diff
(98.2 %id)
BG213047   .c 896 to 1272 1 to 374   AAA   374/374
(100 %)
9 diff
(97.6 %id)
AW338468 adenocarcinoma, Pancreas .c 903 to 1279 390 to 13   AAA   378/378
(100 %)
0 diff
(100 %id)
AI088138 parathyroid gland, parathyroid tumor .c 921 to 1163 338 to 96       243/245
(99 %)
0 diff
(100 %id)
FN175711 breast carcinoma .c 927 to 1025 1 to 97       97/98
(98 %)
6 diff
(93.9 %id)
AW268151 brain, three pooled meningiomas .c 928 to 1276 349 to 1       349/349
(100 %)
0 diff
(100 %id)
AI417463 adenocarcinoma, Pancreas .c 934 to 1280 346 to 1       346/346
(100 %)
1 diff
(99.8 %id)
AA705264 liver and spleen .c 957 to 1272 314 to 1       314/314
(100 %)
22 diff
(93.0 %id)
AA832485 germinal center B cell .c 1029 to 1279 279 to 29   AAA   251/251
(100 %)
0 diff
(100 %id)
BF437641 Prostate .c 1032 to 1279 258 to 11   AAA   248/248
(100 %)
0 diff
(100 %id)
BF752827 breast_normal .c 1111 to 1268 13 to 170       158/170
(92 %)
6 diff
(96.5 %id)
R28937   .c 1145 to 1272 127 to 1     Submitted on the opposite strand 127/127
(100 %)
1 diff
(99.3 %id)
AA147276   .c 1163 to 1272 110 to 1       110/111
(99 %)
0 diff
(100 %id)
CD249642 embryonic stem cells, WA01, passage 38 .c 1251 to 1449 20 to 217   tiling clone, AAA   198/217
(91 %)
6 diff
(97.3 %id)
BG746942 adenocarcinoma cell line, colon .d -9 to 655 1 to 674 P14R P15A D19R W20L R22P ... tiling clone,   674/676
(99 %)
20 diff
(97.1 %id)
CF993689 Human Placenta, placenta .e 1 to 700 29 to 734   tiling clone,   707/845
(83 %)
15 diff
(98.3 %id)
BG774927 carcinoma, cell line, Prostate .e 648 to 1106 1 to 459   tiling clone, AAA   459/459
(100 %)
6 diff
(98.7 %id)
DB474548 hippocampus .f-u 1 to 492 2 to 493       493/493
(100 %)
3 diff
(99.4 %id)
DA839283 placenta .f-u 1 to 388 2 to 390   tiling clone, capped   389/389
(100 %)
1 diff
(99.8 %id)
AK001003 whole embryo, mainly head .f-u 10 to 2017 1 to 2008 exact tiling clone, available from FLJ,   2008/2008
(100 %)
0 diff
(100 %id)
AU118254 whole embryo, mainly head .f-u 11 to 432 2 to 423   capped   422/424
(99 %)
5 diff
(98.9 %id)
DA105507 cerebellum .f-u 26 to 293 2 to 270   capped   269/269
(100 %)
1 diff
(99.7 %id)
DB458345 testis .f-u 132 to 605 1 to 474       474/474
(100 %)
0 diff
(100 %id)
BE018131 cervical carcinoma cell line, cervix .f-u 153 to 547 1 to 395       395/395
(100 %)
0 diff
(100 %id)
BE073326 breast .f-u 775 to 988 103 to 316       214/316
(67 %)
6 diff
(98.2 %id)
BE073423 breast .f-u 775 to 988 99 to 312       214/312
(68 %)
6 diff
(98.1 %id)
BF331537 breast .f-u 775 to 988 104 to 317       214/317
(67 %)
6 diff
(98.2 %id)
AW068972 bone marrow stroma .f-u 1279 to 1702 18 to 441     Submitted on the opposite strand 424/441
(96 %)
5 diff
(98.9 %id)
BE301613 cervical carcinoma cell line, cervix .f-u 1279 to 1638 379 to 20   AAA   360/360
(100 %)
1 diff
(99.8 %id)
AU144862 whole embryo, mainly head .f-u 1444 to 2017 580 to 1       580/582
(99 %)
18 diff
(97.0 %id)
BI599948 brain, hypothalamus .g 1 to 822 7 to 828 S111Y tiling clone,   828/888
(93 %)
26 diff
(97.1 %id)
TI_45215595   .g 1 to 822 90 to 911 S111Y     823/971
(84 %)
29 diff
(97.1 %id)
BQ574947 Chondrosarcoma Grade II, Left Pelvis .h 1 to 696 711 to 19 Y55F L56W A57L H58M E59S ... tiling clone, AAA   693/693
(100 %)
4 diff
(99.5 %id)
AA329700   .h 38 to 363 1 to 327   tiling clone,   327/327
(100 %)
1 diff
(99.7 %id)
AA421397   .j-u 1 to 442 8 to 449 exact tiling clone, fully sequenced,   442/449
(98 %)
6 diff
(98.7 %id)
N66499 cochlea, ear .j-u 89 to 706 615 to 3   tiling clone,   613/643
(95 %)
0 diff
(100 %id)
AW151742 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .j-u 170 to 705 536 to 1       536/536
(100 %)
0 diff
(100 %id)
AA419448 germinal center B cell .j-u 287 to 704 437 to 20   AAA   418/418
(100 %)
0 diff
(100 %id)
AA279131 germinal center B cell .j-u 292 to 704 413 to 1       413/414
(99 %)
0 diff
(100 %id)
AA421293   .j-u 412 to 711 302 to 3   fully sequenced,   300/302
(99 %)
5 diff
(98.4 %id)
BF833017 head_neck .k-u 1 to 690 1 to 685 H27Q tiling clone,   685/696
(98 %)
17 diff
(97.6 %id)
CR738889 germinal center B cell .l 1 to 637 1 to 637 exact tiling clone,   637/637
(100 %)
0 diff
(100 %id)
GD142805   .l 404 to 647 1 to 245   tiling clone, AAA   245/245
(100 %)
11 diff
(95.6 %id)
TI_1948156636   Gene FBXO4, variant not shown       fully sequenced, This clone was ignored    
TI_1948156637   Gene FBXO4, variant not shown       fully sequenced, This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i-u, .j-u, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI