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Gene FBXL6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
140 supporting clones for gene FBXL6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK026541   .a 1 to 1726 1 to 1726 exact tiling clone, available from FLJ, AAA   1726/1726
(100 %)
0 diff
(100 %id)
AK223088   .a 1 to 1726 1 to 1726 exact AAA   1726/1726
(100 %)
0 diff
(100 %id)
NM_024555.3   .a 1 to 1726 1 to 1726 exact RefSeq, AAA   1726/1726
(100 %)
0 diff
(100 %id)
AI475583 B-cell, chronic lymphotic leukemia .a 339 to 742 1 to 404       404/404
(100 %)
1 diff
(99.8 %id)
BM770050 Ascites, stomach .a 570 to 1114 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BM770060 Ascites, stomach .a 570 to 1137 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BM771267 Ascites, stomach .a 570 to 1038 1 to 469       469/469
(100 %)
0 diff
(100 %id)
BM752085 Ascites, stomach .a 595 to 1012 19 to 432       416/432
(96 %)
36 diff
(91.7 %id)
BM761056 lymph node, stomach .b 1 to 665 1 to 665   tiling clone,   665/665
(100 %)
0 diff
(100 %id)
BM423729 amelanotic melanoma, cell line, skin .b 7 to 710 20 to 732       713/1203
(59 %)
27 diff
(97.8 %id)
BC033066 Skin, melanoma, amelanotic .b 12 to 1795 1 to 1784 exact tiling clone, available from MGC, AAA   1784/1784
(100 %)
1 diff
(100.0 %id)
DN996352 breast cancer, Mammary gland (cancer tissue) .b 28 to 790 1 to 763       763/763
(100 %)
6 diff
(99.3 %id)
NM_012162.1   .b 52 to 1795 1 to 1744 exact RefSeq, AAA   1744/1744
(100 %)
0 diff
(100 %id)
AA434109 ovarian tumor, ovary .b 343 to 800 1 to 459     Submitted on the opposite strand 459/459
(100 %)
2 diff
(99.6 %id)
AF174592   .b 344 to 1192 1 to 849       849/849
(100 %)
1 diff
(99.9 %id)
AI087969 pooled .b 344 to 863 1 to 520     Submitted on the opposite strand 520/520
(100 %)
1 diff
(99.9 %id)
BF058839 fibrotheoma, ovary .b 344 to 877 1 to 534     Submitted on the opposite strand 534/534
(100 %)
7 diff
(98.7 %id)
BF112242 pooled .b 344 to 877 1 to 534     Submitted on the opposite strand 534/534
(100 %)
0 diff
(100 %id)
BF115987 fibrotheoma, ovary .b 344 to 1077 1 to 734     Submitted on the opposite strand 734/753
(97 %)
28 diff
(96.3 %id)
BE552433 Kidney .b 345 to 878 1 to 534     Submitted on the opposite strand 534/534
(100 %)
0 diff
(100 %id)
BE386466 melanotic melanoma, skin .b 379 to 1069 1 to 687       687/687
(100 %)
12 diff
(98.3 %id)
BE385745 melanotic melanoma, skin .b 380 to 1050 1 to 665       665/749
(88 %)
15 diff
(98.0 %id)
BE742632 adenocarcinoma cell line, ovary .b 431 to 1022 1 to 592       592/592
(100 %)
0 diff
(100 %id)
DR157841 human embryonic stem cells differentiated toan early endodermal cell type .b 443 to 977 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
BG328322 adenocarcinoma cell line, colon .b 450 to 1136 1 to 688       688/832
(82 %)
9 diff
(99.0 %id)
BM704749 eye, RPE and Choroid .b 660 to 1332 1 to 673   fully sequenced,   673/673
(100 %)
0 diff
(100 %id)
TI_151765970   .b 660 to 1310 103 to 745   AAA   643/1044
(61 %)
24 diff
(97.8 %id)
BX284010 skin .b 675 to 1172 1 to 498       498/498
(100 %)
0 diff
(100 %id)
BG698091 skin .b 676 to 1666 1 to 984       984/1037
(94 %)
32 diff
(97.0 %id)
AA434041 ovarian tumor, ovary .b 690 to 1077 415 to 30     Submitted on the opposite strand 386/415
(93 %)
5 diff
(98.8 %id)
BU730314 eye, RPE and Choroid .b 1271 to 1795 543 to 19   fully sequenced, AAA   525/525
(100 %)
0 diff
(100 %id)
AF370422   .c 1 to 3108 1 to 3108 exact tiling clone, AAA   3108/3108
(100 %)
6 diff
(99.9 %id)
BU149729 ductal carcinoma, cell line, Pancreas .c 724 to 1242 1 to 525       525/1009
(52 %)
16 diff
(98.5 %id)
BQ691903 ductal carcinoma, cell line, Pancreas .c 724 to 1216 1 to 495       495/1174
(42 %)
17 diff
(98.6 %id)
DN999567   .c 738 to 1198 1 to 460       460/467
(98 %)
6 diff
(98.8 %id)
DB474603 hippocampus .c 749 to 1259 1 to 511       511/511
(100 %)
4 diff
(99.3 %id)
DB474696 hippocampus .c 749 to 1123 1 to 375       375/375
(100 %)
5 diff
(98.7 %id)
DB494934 hypothalamus .c 750 to 1242 1 to 493       493/493
(100 %)
4 diff
(99.2 %id)
BM845395 lymph node, stomach .c 751 to 1156 1 to 406       406/406
(100 %)
4 diff
(99.1 %id)
BM911582 amelanotic melanoma, cell line, skin .c 754 to 1116 12 to 374       363/1306
(27 %)
13 diff
(99.1 %id)
BM915814 amelanotic melanoma, cell line, skin .c 758 to 1194 18 to 457       440/1093
(40 %)
26 diff
(97.7 %id)
AW451376   .c 759 to 1101 343 to 1       343/352
(97 %)
0 diff
(100 %id)
AI349081 2 pooled tumors (clear cell type), Kidney .c 770 to 1102 333 to 1       333/333
(100 %)
0 diff
(100 %id)
DB460298 testis .c 788 to 1247 1 to 460   tiling clone,   460/460
(100 %)
1 diff
(99.8 %id)
CB989482 Human Placenta, placenta .c 807 to 1394 27 to 621       595/850
(70 %)
16 diff
(98.2 %id)
AI738740 colon, colon tumor, RER+ .c 861 to 1093 233 to 1       233/233
(100 %)
5 diff
(97.9 %id)
AI453748 adenocarcinoma, Pancreas .c 1094 to 1575 1 to 482   tiling clone, Submitted on the opposite strand 482/482
(100 %)
1 diff
(99.8 %id)
BE044464 pooled .c 1095 to 1561 1 to 467     Submitted on the opposite strand 467/467
(100 %)
1 diff
(99.8 %id)
AW662380 colon, moderately-differentiated adenocarcinoma .c 1104 to 1437 1 to 334     Submitted on the opposite strand 334/334
(100 %)
1 diff
(99.8 %id)
AW005128 thymus, pooled .c 1113 to 1574 1 to 462     Submitted on the opposite strand 462/462
(100 %)
1 diff
(99.8 %id)
AA767520 germinal center B cell .c 1208 to 1481 1 to 273     Submitted on the opposite strand 273/273
(100 %)
16 diff
(94.2 %id)
BM742784 stomach .c 1349 to 1928 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
BM743796 stomach .c 1349 to 1884 1 to 536       536/536
(100 %)
0 diff
(100 %id)
BM748230 stomach .c 1349 to 1852 1 to 504       504/504
(100 %)
4 diff
(99.3 %id)
BM744444 stomach .c 1349 to 1997 1 to 649       649/649
(100 %)
1 diff
(99.9 %id)
BM745309 stomach .c 1349 to 1703 1 to 356       356/356
(100 %)
4 diff
(98.9 %id)
BM784161 stomach .c 1349 to 1928 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BM784242 stomach .c 1349 to 1914 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BM783361 stomach .c 1349 to 2008 1 to 661       661/661
(100 %)
3 diff
(99.6 %id)
BM783425 stomach .c 1349 to 1944 1 to 596       596/596
(100 %)
0 diff
(100 %id)
BM783450 stomach .c 1349 to 1998 1 to 649       649/649
(100 %)
1 diff
(99.9 %id)
BM783609 stomach .c 1349 to 1927 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BM783669 stomach .c 1349 to 1927 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BM741819 stomach .c 1493 to 2007 1 to 515   tiling clone,   515/515
(100 %)
0 diff
(100 %id)
BM753131 stomach .c 1493 to 1685 1 to 194       194/194
(100 %)
3 diff
(98.5 %id)
BM753621 stomach .c 1536 to 1779 1 to 245       245/245
(100 %)
2 diff
(99.2 %id)
F13491 brain, total brain .c 1651 to 1901 1 to 251       251/251
(100 %)
4 diff
(98.5 %id)
T75095 whole brain .c 1673 to 2087 1 to 410       410/414
(99 %)
10 diff
(97.6 %id)
R67183 whole brain .c 1712 to 2141 1 to 431       431/436
(98 %)
9 diff
(98.0 %id)
BE541989 cervix .c 2033 to 2707 1 to 669       669/671
(99 %)
9 diff
(98.7 %id)
AA370939 Prostate .c 2261 to 2474 1 to 214       214/214
(100 %)
4 diff
(98.2 %id)
BM561802 duodenal adenocarcinoma, cell line, small intestine .c 2263 to 3108 893 to 39   AAA Submitted on the opposite strand 855/893
(95 %)
15 diff
(98.4 %id)
BM555776 duodenal adenocarcinoma, cell line, small intestine .c 2274 to 3108 857 to 20   AAA Submitted on the opposite strand 838/946
(88 %)
9 diff
(99.1 %id)
AA215393 germinal center B cell .c 2347 to 2505 1 to 159       159/159
(100 %)
0 diff
(100 %id)
DR762494 embryonic stem .c 2375 to 3108 752 to 19   AAA Submitted on the opposite strand 734/734
(100 %)
0 diff
(100 %id)
BQ006792 Chondrosarcoma, Left Pelvis .c 2399 to 3108 726 to 19   AAA   708/708
(100 %)
2 diff
(99.8 %id)
DA516494 brain .c 2430 to 2982 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BM723694 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2437 to 3108 684 to 13   AAA Submitted on the opposite strand 672/673
(99 %)
0 diff
(100 %id)
BM852717 stomach .c 2456 to 2827 1 to 372       372/372
(100 %)
0 diff
(100 %id)
CB529716 Aveolar Macrophage, lung .c 2476 to 3108 651 to 19   AAA   633/633
(100 %)
0 diff
(100 %id)
AW845318 colon .c 2483 to 2818 25 to 359       335/360
(93 %)
8 diff
(97.8 %id)
BU619423 cell lines, Chondrosarcoma .c 2548 to 3108 579 to 19   AAA   561/561
(100 %)
1 diff
(99.9 %id)
BF057278 pooled germ cell tumors .c 2554 to 3108 555 to 1       555/555
(100 %)
1 diff
(99.9 %id)
CA424813 cell lines, Chondrosarcoma .c 2560 to 3108 567 to 19   AAA   549/549
(100 %)
0 diff
(100 %id)
DR156627 human embryonic stem cells differentiated toan early endodermal cell type .c 2577 to 3108 557 to 26   AAA Submitted on the opposite strand 532/532
(100 %)
11 diff
(98.0 %id)
BF063128 colon, colon tumor, RER+ .c 2578 to 3104 529 to 3       527/529
(99 %)
13 diff
(97.6 %id)
AW003665 Prostate .c 2601 to 3098 502 to 4       499/502
(99 %)
1 diff
(99.9 %id)
R38529 whole brain .c 2812 to 3108 304 to 11   AAA   294/294
(100 %)
10 diff
(96.6 %id)
F10461 brain, total brain .c 2824 to 3108 285 to 1       285/285
(100 %)
0 diff
(100 %id)
AA215394 germinal center B cell .c 2970 to 3108 139 to 1       139/139
(100 %)
0 diff
(100 %id)
AL713783 brain .d 1 to 2006 1 to 2006 exact tiling clone, available from DKFZ, AAA   2006/2006
(100 %)
2 diff
(100.0 %id)
CR986216 T-Lymphocytes .d 349 to 888 1 to 540       540/540
(100 %)
0 diff
(100 %id)
H29649 whole brain .d 535 to 965 1 to 439       439/529
(82 %)
13 diff
(97.6 %id)
BG315158   .d 810 to 1019 1 to 213   tiling clone,   213/213
(100 %)
6 diff
(97.2 %id)
BM548782 duodenal adenocarcinoma, cell line, small intestine .d 1012 to 2009 1014 to 9 R2P K3E L4C W5A L6S ...   Submitted on the opposite strand 1006/1066
(94 %)
21 diff
(98.1 %id)
AI990159 pooled germ cell tumors .d 1514 to 2006 493 to 1       493/493
(100 %)
0 diff
(100 %id)
CB049080 Prostate .d 1533 to 2006 8 to 481   fully sequenced, AAA   474/481
(98 %)
6 diff
(98.8 %id)
BI763946 pooled colon, kidney, stomach .d 1533 to 2006 1 to 473   AAA   473/473
(100 %)
1 diff
(99.8 %id)
TI_57151840   .d 1533 to 2006 68 to 540   AAA   473/540
(87 %)
6 diff
(98.9 %id)
DB543429 hippocampus .d 1536 to 2006 1 to 471     Submitted on the opposite strand 471/471
(100 %)
3 diff
(99.4 %id)
AW300907 colon, moderately differentiated adenocarcinoma .d 1536 to 2007 479 to 8       472/479
(98 %)
0 diff
(100 %id)
DB543527 hippocampus .d 1539 to 2006 1 to 468     Submitted on the opposite strand 468/468
(100 %)
2 diff
(99.6 %id)
DB565977 hypothalamus .d 1544 to 2006 1 to 463     Submitted on the opposite strand 463/463
(100 %)
2 diff
(99.6 %id)
AA765652 germinal center B cell .d 1544 to 2007 462 to 9       454/462
(98 %)
9 diff
(98.1 %id)
AA974513 colon, colon tumor .d 1553 to 1954 402 to 1       402/402
(100 %)
5 diff
(98.8 %id)
AI738928 colon, colon tumor, RER+ .d 1554 to 2007 454 to 1       454/454
(100 %)
3 diff
(99.4 %id)
AW594304 pooled germ cell tumors .d 1565 to 2007 445 to 3       443/445
(99 %)
1 diff
(99.8 %id)
AW246641 lung, small cell carcinoma .d 1568 to 2006 449 to 11   AAA   439/439
(100 %)
2 diff
(99.6 %id)
AA994208 breast .d 1575 to 2007 433 to 3       431/433
(99 %)
2 diff
(99.6 %id)
AI521438 ovary, tumor, 5 pooled (see description) .d 1577 to 2006 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AI819479 lymph node, lymphoma, follicular mixed small and largecell .d 1577 to 2006 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AW083104 colon, moderately differentiated adenocarcinoma .d 1577 to 1984 408 to 1       408/408
(100 %)
0 diff
(100 %id)
AI394059 B-cell, chronic lymphotic leukemia .d 1580 to 2007 431 to 4       428/431
(99 %)
0 diff
(100 %id)
AI130030 uterus .d 1593 to 2006 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AA811418 germinal center B cell .d 1600 to 2006 415 to 11       405/415
(97 %)
1 diff
(99.8 %id)
AA761013 synovial sarcoma .d 1616 to 2006 391 to 1       391/391
(100 %)
0 diff
(100 %id)
R43648 whole brain .d 1629 to 2006 395 to 11   AAA   385/431
(89 %)
16 diff
(96.3 %id)
AA747573 germinal center B cell .d 1629 to 2007 381 to 9       373/381
(97 %)
6 diff
(98.5 %id)
AI583684 pooled germ cell tumors .d 1635 to 2007 374 to 2       373/374
(99 %)
0 diff
(100 %id)
AI748894 colon .d 1636 to 2006 372 to 1       372/372
(100 %)
2 diff
(99.5 %id)
AA483531 colon .d 1666 to 2007 343 to 2       342/343
(99 %)
0 diff
(100 %id)
H29565 whole brain .d 1667 to 2007 347 to 9       339/347
(97 %)
1 diff
(99.8 %id)
AW236517 pooled germ cell tumors .d 1670 to 2010 342 to 2       341/342
(99 %)
0 diff
(100 %id)
AA836959 colon, colon tumor .d 1671 to 2007 341 to 5       337/341
(98 %)
0 diff
(100 %id)
AW196291 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 1691 to 2006 317 to 1       317/318
(99 %)
1 diff
(99.7 %id)
AI608701 ovary, tumor, 5 pooled (see description) .d 1720 to 2006 314 to 27   AAA   288/288
(100 %)
8 diff
(97.3 %id)
AI474368 Prostate .d 1751 to 2006 256 to 1       256/256
(100 %)
0 diff
(100 %id)
AW117865 esophagus, squamous cell carcinoma .d 1775 to 2006 243 to 12   AAA   232/232
(100 %)
5 diff
(97.9 %id)
AV749164 Pituitary .d 1836 to 1992 1 to 157       157/163
(96 %)
3 diff
(98.2 %id)
CB049079 Prostate .d 1868 to 2006 162 to 24   fully sequenced, AAA   139/139
(100 %)
0 diff
(100 %id)
EC562735 Prostate .d 1897 to 2006 113 to 4       110/113
(97 %)
0 diff
(100 %id)
T25126   .d 1920 to 2007 90 to 3       88/90
(97 %)
0 diff
(100 %id)
BQ690087 ductal carcinoma, cell line, Pancreas .e 1 to 590 1 to 592   tiling clone,   592/957
(61 %)
17 diff
(98.3 %id)
BM843061 lymph node, stomach .e 29 to 536 1 to 508       508/508
(100 %)
3 diff
(99.5 %id)
BM810977 amelanotic melanoma, cell line, skin .e 40 to 613 1 to 577       577/1277
(45 %)
20 diff
(98.5 %id)
BM550517 amelanotic melanoma, cell line, skin .e 59 to 623 1 to 566       566/1119
(50 %)
20 diff
(98.3 %id)
BM913374 amelanotic melanoma, cell line, skin .e 61 to 621 1 to 560       560/1335
(41 %)
21 diff
(98.5 %id)
BQ689681 ductal carcinoma, cell line, Pancreas .e 77 to 608 1 to 535       535/1052
(50 %)
12 diff
(98.9 %id)
BQ958788 carcinoma, cell line, Prostate .e 93 to 658 1 to 579       579/1338
(43 %)
36 diff
(97.4 %id)
AW517331 cervix .e 372 to 877 1 to 506   tiling clone, Submitted on the opposite strand 506/506
(100 %)
0 diff
(100 %id)
BM695338 eye, optic nerve .f 1 to 567 1 to 564   tiling clone, fully sequenced,   564/564
(100 %)
3 diff
(99.5 %id)
BM664987 eye, optic nerve .f 537 to 971 453 to 19   tiling clone, fully sequenced, AAA   435/435
(100 %)
2 diff
(99.6 %id)
BE796723 lung, small cell carcinoma .g 1 to 697 1 to 697 L72P E73G V74G S75E T76H ... tiling clone,   697/698
(99 %)
5 diff
(99.3 %id)
CN258617 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h 1 to 490 1 to 490 exact tiling clone,   490/490
(100 %)
0 diff
(100 %id)
CN258616 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i 1 to 654 1 to 653 Q17K G18A G19E E20K E21K ... tiling clone,   653/653
(100 %)
3 diff
(99.6 %id)
DB482364 hippocampus Gene FBXL6, variant not shown         Suspected internal deletion, this clone was ignored    
CT000858 T-Lymphocytes Gene FBXL6, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI