To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene FARSBTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
449 supporting clones for gene FARSB back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF571651 melanotic melanoma, high MDR, skin .a 1 to 682 1 to 689   tiling clone,   689/854
(80 %)
32 diff
(96.3 %id)
BF239313 bone marrow, from chronic myelogenous leukemia .a 2 to 577 1 to 580       581/778
(74 %)
53 diff
(93.2 %id)
BF184139 bone marrow, from chronic myelogenous leukemia .a 3 to 682 1 to 677   tiling clone,   677/903
(74 %)
31 diff
(96.6 %id)
BF184258 bone marrow, from chronic myelogenous leukemia .a 3 to 737 1 to 723   tiling clone,   726/724
(100 %)
33 diff
(95.5 %id)
BG779281 adenocarcinoma, Prostate .a 3 to 629 1 to 627   tiling clone,   627/627
(100 %)
1 diff
(99.9 %id)
BF242589 bone marrow, from acute myelogenous leukemia .a 4 to 656 1 to 648       648/874
(74 %)
23 diff
(97.4 %id)
BF690719 melanotic melanoma, high MDR, skin .a 12 to 650 1 to 649       649/953
(68 %)
19 diff
(98.1 %id)
BF240763 bone marrow, from acute myelogenous leukemia .a 22 to 565 1 to 549       549/1443
(38 %)
16 diff
(98.9 %id)
BQ434787 melanotic melanoma, skin .a 735 to 1558 11 to 838   tiling clone,   828/842
(98 %)
18 diff
(97.9 %id)
DB552521 hippocampus .a 1513 to 1974 1 to 463   tiling clone, Submitted on the opposite strand 463/465
(99 %)
5 diff
(99.0 %id)
AK294158 alzheimer cortex .b 1 to 1934 1 to 1934 V597I tiling clone,   1934/1934
(100 %)
1 diff
(100.0 %id)
DC312795 alzheimer cortex .b 1 to 564 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
BG721840 testis .c 1 to 769 1 to 774   tiling clone,   772/774
(99 %)
11 diff
(98.6 %id)
DC397991 testis .c 21 to 574 1 to 555       555/555
(100 %)
3 diff
(99.5 %id)
NM_005687.3   .c 250 to 2482 1 to 2233 exact RefSeq,   2233/2233
(100 %)
0 diff
(100 %id)
BP380298 uterus .c 250 to 828 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC301342 bladder .c 255 to 727 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
DA919726 small intestine .c 261 to 823 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB180868 kidney, tumor tissue .c 261 to 830 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB472343 hippocampus .c 262 to 749 1 to 488       488/488
(100 %)
0 diff
(100 %id)
DA825908 pericardium .c 263 to 804 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
AF161521 blood .c 265 to 2180 1 to 1916 Q281R V585I AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1916/1916
(100 %)
3 diff
(99.9 %id)
DA086766 cerebellum .c 266 to 815 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BP274687 Kidney .c 266 to 833 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BP371776 umbilical cord .c 266 to 848 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA007190   .c 267 to 831 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA011011 adrenal gland .c 267 to 832 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA032004   .c 267 to 830 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA070886 cerebellum .c 267 to 808 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA072153 cerebellum .c 267 to 866 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA087677 cerebellum .c 267 to 833 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA090356 cerebellum .c 267 to 833 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA151607 amygdala .c 267 to 848 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA165518 amygdala .c 267 to 845 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA361787 subthalamic nucleus .c 267 to 813 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA382792 thalamus .c 267 to 902 2 to 637   capped   636/636
(100 %)
0 diff
(100 %id)
DA611516   .c 267 to 842 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA661268   .c 267 to 833 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA684898   .c 267 to 814 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA701576   .c 267 to 787 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA747875   .c 267 to 834 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA812788 Pancreas .c 267 to 1055 2 to 790   capped   789/860
(91 %)
4 diff
(99.6 %id)
DA817230   .c 267 to 837 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA903961   .c 267 to 811 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA904193   .c 267 to 858 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA910415   .c 267 to 819 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA912678   .c 267 to 827 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA961222 Spleen .c 267 to 822 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB016196 esophageal, tumor tissue .c 267 to 839 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB018379 esophageal, tumor tissue .c 267 to 815 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB026133 testis .c 267 to 829 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB034048 testis .c 267 to 832 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB103431 thymus .c 267 to 815 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB161344 thymus .c 267 to 841 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB176262 kidney, tumor tissue .c 267 to 831 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AK291531 placenta .c 268 to 2180 1 to 1913 D59G V229A V585I     1913/1913
(100 %)
3 diff
(99.9 %id)
DA053923 cerebellum .c 268 to 1040 2 to 771   capped   770/779
(98 %)
5 diff
(99.4 %id)
FN092033 breast carcinoma .c 268 to 333 9 to 73       65/73
(89 %)
6 diff
(91.8 %id)
DB481824 hippocampus .c 268 to 657 1 to 390       390/390
(100 %)
1 diff
(99.8 %id)
DB483589 hippocampus .c 268 to 718 1 to 451       451/451
(100 %)
0 diff
(100 %id)
DC424565 placenta .c 268 to 993 1 to 735       735/735
(100 %)
20 diff
(97.3 %id)
DA004660   .c 269 to 824 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA006471   .c 269 to 822 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA175362 amygdala .c 269 to 831 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA199206 brain .c 269 to 846 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA529146 brain .c 269 to 881 2 to 614   capped   613/613
(100 %)
0 diff
(100 %id)
DA596380   .c 269 to 830 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA600266   .c 269 to 823 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA895949 skeletal muscle .c 269 to 828 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA912217   .c 269 to 849 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA961849 Spleen .c 269 to 820 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB026095 testis .c 269 to 819 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB027961 testis .c 269 to 796 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DB056888 testis .c 269 to 781 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA555019   .c 270 to 846 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BM546747 ovary (pool of 3) .c 270 to 1188 21 to 943       920/1065
(86 %)
20 diff
(98.2 %id)
DA951609 Spleen .c 270 to 827 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB046215 testis .c 271 to 839 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
D84430   .c 272 to 3389 1 to 3118 G555V V585I tiling clone,   3118/3118
(100 %)
3 diff
(100.0 %id)
DA664459   .c 272 to 1024 2 to 755   capped   754/754
(100 %)
4 diff
(99.5 %id)
DA832990 placenta .c 272 to 1027 2 to 765   capped   758/764
(99 %)
10 diff
(98.7 %id)
DA988837 synovial membrane tissue from rheumatioidarthritis .c 272 to 838 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB050255 testis .c 272 to 841 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB178814 kidney, tumor tissue .c 272 to 814 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
BC017783 Testis, embryonal carcinoma .c 273 to 2178 1 to 1906 V585I available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1906/1908
(99 %)
3 diff
(99.9 %id)
DA282904 corpus callosum .c 273 to 832 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA363696 subthalamic nucleus .c 273 to 850 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA534279 brain .c 273 to 844 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB498175 hypothalamus .c 273 to 780 1 to 508       508/508
(100 %)
0 diff
(100 %id)
TI_57238379   .c 273 to 1056 37 to 824   AAA   788/1015
(77 %)
26 diff
(97.5 %id)
DA911731   .c 273 to 837 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB014105 esophageal, tumor tissue .c 273 to 838 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB044221 testis .c 273 to 801 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DB217964 trachea .c 273 to 814 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA035444 breast .c 274 to 815 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA279287 corpus callosum .c 274 to 809 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA512380 brain .c 274 to 808 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA612183   .c 274 to 829 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA902505   .c 274 to 840 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA908547   .c 274 to 831 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB017886 esophageal, tumor tissue .c 274 to 827 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB246467 uterus, tumor tissue .c 274 to 846 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BJ991456 hepatoblastoma .c 275 to 857 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BG912702 anaplastic oligodendroglioma with 1p/19qloss, brain .c 275 to 1074 1 to 805       805/852
(94 %)
13 diff
(98.5 %id)
DB249815 uterus .c 275 to 821 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA167601 amygdala .c 276 to 842 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA020877   .c 277 to 836 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BC008434 Bone marrow, acute myelogenous leukemia .c 277 to 2178 1 to 1903 N493K Y494L R495Q H496T L497S ... available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1903/1905
(99 %)
3 diff
(99.9 %id)
BU192309 embryonal carcinoma, cell line, testis .c 277 to 1188 1 to 917       915/917
(99 %)
13 diff
(98.6 %id)
CB133346 Liver .c 277 to 722 1 to 446       446/446
(100 %)
0 diff
(100 %id)
DA695216   .c 277 to 832 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA230187 brain .c 278 to 814 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA253181 caudate nucleus .c 278 to 864 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA562516 heart .c 278 to 848 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BU177079 melanotic melanoma, skin .c 278 to 1185 32 to 941       910/943
(96 %)
19 diff
(98.0 %id)
DA603473   .c 278 to 1051 2 to 775   capped   774/778
(99 %)
4 diff
(99.5 %id)
DA902158   .c 278 to 858 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA978848 synovial membrane tissue from rheumatioidarthritis .c 278 to 827 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA999459 breast, tumor tissue .c 278 to 806 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DB018722 esophageal, tumor tissue .c 278 to 845 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB192217 ovary, tumor tissue .c 278 to 836 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BP373065 umbilical cord .c 278 to 858 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA174791 amygdala .c 279 to 792 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
TI_154179564   .c 279 to 1124 70 to 911       842/843
(99 %)
14 diff
(98.4 %id)
TI_59380633   .c 280 to 961 97 to 787       691/691
(100 %)
13 diff
(98.2 %id)
DB252086 uterus .c 280 to 856 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA037582   .c 281 to 836 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA177214 amygdala .c 281 to 640 2 to 361   capped   360/360
(100 %)
0 diff
(100 %id)
DA469455   .c 281 to 850 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA553396   .c 281 to 858 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB047809 testis .c 281 to 837 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB179946 kidney, tumor tissue .c 281 to 836 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB182973 liver, tumor tissue .c 281 to 851 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA003385   .c 283 to 845 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA129125 alzheimer cortex .c 283 to 849 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BG255099 adenocarcinoma, cell line, Prostate .c 283 to 995 1 to 720       718/1006
(71 %)
12 diff
(98.9 %id)
BU155599 melanotic melanoma, skin .c 283 to 1108 1 to 829       829/830
(99 %)
11 diff
(98.7 %id)
DA607970   .c 283 to 905 2 to 624   capped   623/623
(100 %)
0 diff
(100 %id)
DA692393   .c 283 to 842 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA868003 Prostate .c 283 to 823 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA902407   .c 283 to 839 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB108657 thymus .c 283 to 852 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CN429136 embryonic stem cells, DMSO-treated H9 cellline .c 284 to 909 1 to 626       626/626
(100 %)
0 diff
(100 %id)
TI_1948222290   .c 284 to 1132 130 to 978       849/1288
(65 %)
29 diff
(97.8 %id)
TI_1948222291   .c 284 to 1187 135 to 1043       909/1151
(78 %)
30 diff
(97.4 %id)
TI_1948222588   .c 284 to 1130 127 to 970       844/1270
(66 %)
31 diff
(97.6 %id)
TI_1948222589   .c 284 to 1203 134 to 1060       926/1160
(79 %)
24 diff
(98.0 %id)
TI_1948222891   .c 284 to 989 130 to 845       716/1333
(53 %)
28 diff
(97.9 %id)
TI_1948222892   .c 284 to 1188 128 to 1046       917/1173
(78 %)
33 diff
(97.2 %id)
TI_1948223199   .c 284 to 1130 129 to 977       849/1268
(66 %)
18 diff
(98.6 %id)
TI_1948223200   .c 284 to 1194 131 to 1041       909/1217
(74 %)
17 diff
(98.7 %id)
AF042346   .c 285 to 2240 1 to 1956 V585I AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1956/1956
(100 %)
4 diff
(99.8 %id)
CR619824 adult brain .c 285 to 2133 1 to 1849 exact     1849/1849
(100 %)
0 diff
(100 %id)
BX360063 Placenta Cot 25-normalized .c 285 to 1279 1 to 987   fully sequenced,   987/987
(100 %)
10 diff
(99.0 %id)
AL533492 adult brain, brain .c 285 to 1163 1 to 880   fully sequenced,   880/880
(100 %)
1 diff
(99.9 %id)
EL735462 mixed .c 285 to 890 1 to 606       606/628
(96 %)
0 diff
(100 %id)
BJ996731 hepatoblastoma .c 285 to 821 1 to 537       537/537
(100 %)
0 diff
(100 %id)
DA031133   .c 286 to 851 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA058359 cerebellum .c 286 to 816 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA350487 substantia nigra .c 286 to 858 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA367853 subthalamic nucleus .c 286 to 840 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CR603404 Placenta Cot 25-normalized .c 286 to 2152 1 to 1867       1867/1867
(100 %)
0 diff
(100 %id)
BX377239 Placenta Cot 25-normalized .c 286 to 1186 1 to 899   fully sequenced,   899/899
(100 %)
7 diff
(99.3 %id)
DA603869   .c 286 to 786 2 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
DA608648   .c 286 to 831 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA611645   .c 286 to 871 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA613214   .c 286 to 862 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA698685   .c 286 to 774 2 to 490   capped   489/489
(100 %)
0 diff
(100 %id)
DB042527 testis .c 286 to 836 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB054635 testis .c 286 to 865 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB192132 ovary, tumor tissue .c 286 to 856 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
AA215840   .c 287 to 535 1 to 246       246/250
(98 %)
19 diff
(92.4 %id)
CB159488 Liver .c 288 to 846 1 to 559       559/559
(100 %)
0 diff
(100 %id)
CR605981 adult brain .c 289 to 2147 1 to 1859       1859/1859
(100 %)
0 diff
(100 %id)
BX444488 adult brain, brain .c 289 to 1215 1 to 927   fully sequenced,   927/927
(100 %)
0 diff
(100 %id)
BI259238 cervical carcinoma cell line, cervix .c 289 to 1101 1 to 816       816/816
(100 %)
4 diff
(99.6 %id)
BU181842 eye, retinoblastoma .c 289 to 1183 1 to 898       898/898
(100 %)
6 diff
(99.4 %id)
TI_57216561   .c 293 to 1118 34 to 860       827/860
(96 %)
12 diff
(98.7 %id)
TI_57149342   .c 293 to 1016 27 to 749       723/749
(96 %)
7 diff
(99.1 %id)
DA694989   .c 293 to 848 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BM450407 eye, retinoblastoma .c 295 to 1183 1 to 893       893/1038
(86 %)
16 diff
(98.5 %id)
BM802795 embryonal carcinoma, cell line, testis .c 295 to 1355 1 to 1072       1072/1151
(93 %)
72 diff
(93.8 %id)
AW247366 lung, small cell carcinoma .c 296 to 533 10 to 247   available from MGC,   238/251
(94 %)
7 diff
(97.3 %id)
BC006502 Lung, small cell carcinoma .c 296 to 2180 1 to 1885   available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1885/1885
(100 %)
1 diff
(100.0 %id)
DA085451 cerebellum .c 298 to 867 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
AL516134 brain, neuroblastoma, neuroblastoma cells .c 299 to 1185 1 to 887       887/887
(100 %)
4 diff
(99.6 %id)
CR614902 fetal brain .c 306 to 2229 1 to 1924   tiling clone,   1924/1924
(100 %)
0 diff
(100 %id)
AL535056 brain, fetal brain .c 313 to 1329 7 to 1015   fully sequenced,   1009/1015
(99 %)
7 diff
(99.4 %id)
BQ683189 melanotic melanoma, cell line, skin .c 314 to 1188 1 to 885       883/933
(94 %)
19 diff
(98.0 %id)
EC541536 Prostate .c 315 to 402 1 to 88       88/94
(93 %)
3 diff
(96.9 %id)
BF796759 lymph, lymphoma, cell line .c 315 to 1003 1 to 693       693/959
(72 %)
8 diff
(99.2 %id)
BI757773 brain .c 325 to 1083 1 to 761       761/969
(78 %)
9 diff
(99.1 %id)
CN429139 embryonic stem cells, cell lines H1, H7, andH9 .c 328 to 496 1 to 169       169/169
(100 %)
0 diff
(100 %id)
TI_57220705   .c 338 to 1083 47 to 794       748/1002
(74 %)
13 diff
(98.8 %id)
EC546721 Prostate .c 340 to 447 1 to 106       106/106
(100 %)
4 diff
(96.3 %id)
BG109815 Bone, osteosarcoma, cell line .c 347 to 1133 1 to 795       793/907
(87 %)
13 diff
(98.6 %id)
DA830123 placenta .c 361 to 1080 2 to 724   capped   723/752
(96 %)
12 diff
(98.5 %id)
DA005895   .c 370 to 887 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
BI832110 brain, medulla .c 399 to 862 148 to 630       481/630
(76 %)
14 diff
(97.8 %id)
TI_57174726   .c 399 to 862 148 to 630       481/630
(76 %)
14 diff
(97.8 %id)
BF027981 bladder, carcinoma, cell line .c 400 to 890 39 to 545       505/831
(60 %)
30 diff
(96.4 %id)
BQ352428 head_neck .c 402 to 879 9 to 486       478/486
(98 %)
11 diff
(97.8 %id)
BM472169 melanotic melanoma, skin .c 416 to 1188 1 to 781       781/944
(82 %)
12 diff
(98.8 %id)
BG776335 lung, mucoepidermoid carcinoma .c 423 to 997 204 to 800       597/822
(72 %)
24 diff
(97.1 %id)
BF310760 brain, neuroblastoma .c 450 to 1188 1 to 743       745/884
(84 %)
20 diff
(97.8 %id)
AA353800   .c 528 to 836 1 to 308       308/308
(100 %)
3 diff
(99.1 %id)
BQ337740 nervous_normal .c 552 to 1182 8 to 640       635/660
(96 %)
24 diff
(96.4 %id)
CV323919 colon_normal .c 553 to 935 10 to 391       381/392
(97 %)
11 diff
(97.2 %id)
BQ337739 nervous_normal .c 555 to 1180 1 to 624       624/632
(98 %)
15 diff
(97.7 %id)
CN429142 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 557 to 1324 1 to 767       767/767
(100 %)
2 diff
(99.8 %id)
CN429140 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 568 to 998 1 to 431       431/431
(100 %)
0 diff
(100 %id)
BE892050 melanotic melanoma, skin .c 569 to 1116 1 to 555       553/848
(65 %)
13 diff
(98.5 %id)
BQ437945 melanotic melanoma, skin .c 574 to 1423 1 to 851       851/851
(100 %)
7 diff
(99.2 %id)
BQ302666 breast .c 687 to 1183 14 to 510       497/510
(97 %)
9 diff
(98.3 %id)
BQ352201 head_neck .c 694 to 1126 434 to 1       434/434
(100 %)
7 diff
(98.4 %id)
AA361306   .c 701 to 1000 1 to 302       302/311
(97 %)
3 diff
(99.1 %id)
FN125311 breast carcinoma .c 769 to 866 1 to 98       98/98
(100 %)
0 diff
(100 %id)
FN147168 breast carcinoma .c 788 to 890 1 to 101       101/101
(100 %)
4 diff
(96.1 %id)
CB155099 brain .c 801 to 1465 1 to 664       664/664
(100 %)
3 diff
(99.6 %id)
BG926223 cartilage .c 827 to 1144 87 to 405       319/347
(91 %)
10 diff
(97.2 %id)
BQ438273 leiomyosarcoma, uterus .c 845 to 1698 1 to 859       859/862
(99 %)
9 diff
(99.0 %id)
BQ428504 leiomyosarcoma, uterus .c 845 to 1630 1 to 790       790/903
(87 %)
7 diff
(99.3 %id)
DR156054 human embryonic stem cells differentiated toan early endodermal cell type .c 888 to 1732 1 to 845       845/845
(100 %)
0 diff
(100 %id)
EL949511 eyeball .c 960 to 1535 18 to 592       575/594
(96 %)
8 diff
(98.7 %id)
BQ923444 epidermoid carcinoma, cell line, lung .c 973 to 1903 1 to 929       929/964
(96 %)
15 diff
(98.5 %id)
BQ921822 epidermoid carcinoma, cell line, lung .c 973 to 1844 1 to 873       873/878
(99 %)
6 diff
(99.4 %id)
FN133616 breast carcinoma .c 1053 to 1162 1 to 111       111/111
(100 %)
1 diff
(99.1 %id)
EL948556 eyeball .c 1069 to 1432 33 to 396       364/396
(91 %)
6 diff
(98.5 %id)
BP208856 cerebellum .c 1078 to 1662 1 to 585       585/585
(100 %)
0 diff
(100 %id)
AL533448 adult brain, brain .c 1102 to 2080 1025 to 43   fully sequenced,   981/1023
(95 %)
6 diff
(99.5 %id)
BI870599 adenocarcinoma, cell line, Liver .c 1108 to 2026 1 to 924       924/924
(100 %)
12 diff
(98.8 %id)
TI_57229529   .c 1108 to 2026 54 to 977       924/924
(100 %)
12 diff
(98.8 %id)
BX355793 Placenta Cot 25-normalized .c 1139 to 2151 1009 to 1   fully sequenced,   1009/1009
(100 %)
11 diff
(99.0 %id)
BG112327 Bone, osteosarcoma, cell line .c 1139 to 1903 1 to 768       768/979
(78 %)
7 diff
(99.3 %id)
BI850406 Bone, osteosarcoma, cell line .c 1139 to 1842 1 to 705       705/705
(100 %)
1 diff
(99.9 %id)
BX444487 adult brain, brain .c 1154 to 2147 990 to 1   fully sequenced,   990/990
(100 %)
6 diff
(99.4 %id)
TI_1948223201   .c 1199 to 2053 984 to 125       860/1229
(69 %)
14 diff
(98.9 %id)
AA434163 ovarian tumor, ovary .c 1213 to 1683 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
AL516133 brain, neuroblastoma, neuroblastoma cells .c 1217 to 2163 948 to 1       948/948
(100 %)
9 diff
(99.1 %id)
CN429143 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 1241 to 1961 3 to 727       729/727
(100 %)
8 diff
(98.9 %id)
TI_1948222590   .c 1241 to 2053 954 to 131       824/1217
(67 %)
23 diff
(98.2 %id)
BX360062 Placenta Cot 25-normalized .c 1243 to 2110 900 to 33   fully sequenced,   866/898
(96 %)
8 diff
(99.2 %id)
R94292 liver and spleen .c 1248 to 1630 1 to 390       390/468
(83 %)
9 diff
(98.1 %id)
FN074996 breast carcinoma .c 1250 to 1338 1 to 85       85/90
(94 %)
5 diff
(94.5 %id)
AA465541 germinal center B cell .c 1250 to 1647 1 to 397       397/397
(100 %)
1 diff
(99.8 %id)
T49966 placenta .c 1253 to 1553 1 to 305       305/328
(92 %)
11 diff
(96.7 %id)
TI_1948222292   .c 1254 to 2053 930 to 129       802/1201
(66 %)
7 diff
(99.5 %id)
BX343267   .c 1259 to 2152 894 to 1       894/903
(99 %)
14 diff
(98.5 %id)
CD674591 eye, lens .c 1282 to 1897 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
BF955336 nervous_normal .c 1286 to 1501 399 to 184       216/399
(54 %)
0 diff
(100 %id)
AL535055 brain, fetal brain .c 1299 to 2229 931 to 1   fully sequenced,   931/931
(100 %)
10 diff
(99.0 %id)
BE537310 cervix .c 1300 to 1987 1 to 683       683/684
(99 %)
6 diff
(99.2 %id)
TI_149314973   .c 1307 to 2180 944 to 83   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 862/985
(87 %)
21 diff
(97.9 %id)
BX352649   .c 1308 to 2173 870 to 5       866/889
(97 %)
11 diff
(98.8 %id)
BU175447 large cell carcinoma, lung .c 1314 to 2178 1 to 872       872/917
(95 %)
25 diff
(97.3 %id)
TI_1948222893   .c 1314 to 2053 883 to 133       751/1310
(57 %)
24 diff
(98.2 %id)
TI_57231365   .c 1315 to 2133 54 to 868       815/819
(99 %)
11 diff
(98.7 %id)
CB158128 Liver .c 1319 to 1903 1 to 586       586/613
(95 %)
2 diff
(99.7 %id)
BG677336 skin, squamous cell carcinoma .c 1322 to 2045 12 to 735       724/735
(98 %)
7 diff
(99.1 %id)
CD356606 Blood vessels - aorta, basilar and artery .c 1324 to 2015 1 to 703       703/769
(91 %)
25 diff
(96.8 %id)
BM724231 eye, fetal eye .c 1324 to 1777 1 to 454   fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 454/454
(100 %)
0 diff
(100 %id)
BG206817   .c 1349 to 2169 832 to 13     Submitted on the opposite strand 820/878
(93 %)
54 diff
(93.9 %id)
W35234 heart .c 1352 to 1804 1 to 455       455/455
(100 %)
5 diff
(99.0 %id)
CB143222 Liver .c 1352 to 2026 1 to 675       675/675
(100 %)
1 diff
(99.9 %id)
BG199003   .c 1358 to 2170 815 to 8     Submitted on the opposite strand 808/816
(99 %)
21 diff
(97.5 %id)
TI_149296473   .c 1361 to 2180 874 to 66   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 809/910
(88 %)
18 diff
(98.1 %id)
BG217359   .c 1365 to 2166 817 to 17     Submitted on the opposite strand 801/819
(97 %)
1 diff
(99.9 %id)
BG215231   .c 1366 to 2169 814 to 11     Submitted on the opposite strand 804/814
(98 %)
9 diff
(98.9 %id)
CK004492 brain/CNS, Human Brain - Frontal Cortex .c 1372 to 1952 1 to 581       581/582
(99 %)
3 diff
(99.5 %id)
BG213610   .c 1373 to 2166 805 to 17     Submitted on the opposite strand 789/851
(92 %)
14 diff
(98.4 %id)
H84523 eye, retina .c 1374 to 1735 1 to 367       367/367
(100 %)
7 diff
(98.1 %id)
AL119097 amygdala .c 1379 to 1646 1 to 268       268/268
(100 %)
0 diff
(100 %id)
BM699108 eye, fetal eyes .c 1379 to 1777 1 to 399   fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 399/399
(100 %)
0 diff
(100 %id)
AW807879 stomach .c 1386 to 1581 1 to 196       196/196
(100 %)
9 diff
(95.5 %id)
H21215 brain .c 1389 to 1701 15 to 334   fully sequenced,   320/334
(95 %)
13 diff
(96.2 %id)
AA398788   .c 1425 to 1903 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
AA365905 pineal body .c 1429 to 1687 1 to 259       259/259
(100 %)
0 diff
(100 %id)
BM798591 myeloma .c 1443 to 1897 1 to 455       455/455
(100 %)
0 diff
(100 %id)
BG216866   .c 1451 to 2172 731 to 10     Submitted on the opposite strand 722/878
(82 %)
11 diff
(98.8 %id)
TI_159702630   .c 1451 to 2180 866 to 137   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 730/970
(75 %)
25 diff
(97.5 %id)
BG190856   .c 1452 to 2170 727 to 9     Submitted on the opposite strand 719/865
(83 %)
16 diff
(98.2 %id)
BP430699   .c 1455 to 1764 8 to 317       309/317
(97 %)
6 diff
(98.2 %id)
BG193435   .c 1456 to 2165 731 to 20     Submitted on the opposite strand 712/966
(73 %)
15 diff
(98.5 %id)
BE832971 ovary .c 1458 to 1875 425 to 14       412/425
(96 %)
2 diff
(99.6 %id)
BG254250 adenocarcinoma, cell line, Prostate .c 1459 to 2172 1 to 726       726/775
(93 %)
22 diff
(97.2 %id)
CB129617 Liver .c 1463 to 1861 1 to 399       399/399
(100 %)
4 diff
(99.0 %id)
BG202084   .c 1475 to 2166 703 to 17     Submitted on the opposite strand 687/878
(78 %)
31 diff
(96.5 %id)
FN112600 breast carcinoma .c 1496 to 1591 1 to 98       98/98
(100 %)
2 diff
(98.0 %id)
BU942291 mixed (pool of 40 RNAs) .c 1521 to 2106 1 to 595       595/813
(73 %)
14 diff
(98.3 %id)
BG186655   .c 1535 to 2166 648 to 17     Submitted on the opposite strand 632/899
(70 %)
14 diff
(98.5 %id)
BG192908   .c 1535 to 2170 645 to 9     Submitted on the opposite strand 637/883
(72 %)
6 diff
(99.4 %id)
BG197975   .c 1535 to 2166 648 to 18     Submitted on the opposite strand 631/891
(70 %)
7 diff
(99.3 %id)
BG196464   .c 1539 to 2174 644 to 6     Submitted on the opposite strand 639/865
(73 %)
36 diff
(95.9 %id)
BG218511   .c 1539 to 2161 642 to 19     Submitted on the opposite strand 624/848
(73 %)
21 diff
(97.6 %id)
BG189252   .c 1543 to 2170 639 to 8     Submitted on the opposite strand 629/923
(68 %)
28 diff
(97.0 %id)
CB052341 leiomyosarcoma, soft tissue .c 1551 to 2157 25 to 631   fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 607/631
(96 %)
8 diff
(98.8 %id)
BG189836   .c 1558 to 2170 624 to 8     Submitted on the opposite strand 617/893
(69 %)
17 diff
(98.1 %id)
BM696907 eye, lens .c 1562 to 1933 1 to 372   fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 372/372
(100 %)
0 diff
(100 %id)
FN082092 breast carcinoma .c 1563 to 1623 62 to 1     Submitted on the opposite strand 62/63
(98 %)
1 diff
(98.5 %id)
CR596774 T cells (Jurkat cell line) Cot10-normalized .c 1570 to 2180 1 to 611       611/611
(100 %)
0 diff
(100 %id)
T32591 gallbladder .c 1585 to 1903 1 to 319       319/319
(100 %)
1 diff
(99.7 %id)
BF765223 colon_est .c 1586 to 1843 1 to 258       258/258
(100 %)
0 diff
(100 %id)
AA878330 carcinoid, lung .c 1588 to 1899 313 to 1       313/313
(100 %)
9 diff
(97.2 %id)
Z33444   .c 1612 to 1982 1 to 372       372/372
(100 %)
1 diff
(99.8 %id)
BG185567   .c 1619 to 2170 561 to 11     Submitted on the opposite strand 551/972
(56 %)
14 diff
(98.6 %id)
BJ991457 hepatoblastoma .c 1623 to 2162 540 to 1       540/540
(100 %)
1 diff
(99.9 %id)
BG216293   .c 1626 to 2174 557 to 6     Submitted on the opposite strand 552/953
(57 %)
51 diff
(94.7 %id)
BG200061   .c 1627 to 2167 542 to 1     Submitted on the opposite strand 542/842
(64 %)
19 diff
(97.8 %id)
BG200559   .c 1627 to 2166 557 to 17     Submitted on the opposite strand 541/866
(62 %)
10 diff
(98.9 %id)
BG202627   .c 1627 to 2166 558 to 16     Submitted on the opposite strand 543/849
(63 %)
26 diff
(97.0 %id)
AI186116 lung .c 1641 to 1702 64 to 3       62/64
(96 %)
0 diff
(100 %id)
DB353557   .c 1658 to 2180 525 to 1       525/525
(100 %)
10 diff
(98.1 %id)
DB550661 hippocampus .c 1682 to 2178 1 to 497     Submitted on the opposite strand 497/499
(99 %)
3 diff
(99.4 %id)
FN138520 breast carcinoma .c 1684 to 1790 1 to 107       107/107
(100 %)
5 diff
(95.4 %id)
H19837 brain .c 1689 to 2052 361 to 1   fully sequenced,   361/361
(100 %)
8 diff
(97.8 %id)
TI_154093057   .c 1700 to 2180 591 to 111   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 481/481
(100 %)
1 diff
(99.8 %id)
DB296368 cerebellum .c 1703 to 2180 479 to 1       479/479
(100 %)
8 diff
(98.4 %id)
DB322002   .c 1716 to 2180 468 to 1       468/468
(100 %)
7 diff
(98.6 %id)
BM669766 eye, fetal eyes .c 1716 to 2180 483 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 465/465
(100 %)
1 diff
(99.8 %id)
BM680381 eye, fetal eye .c 1716 to 2180 483 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 465/465
(100 %)
1 diff
(99.8 %id)
DB541097 hippocampus .c 1725 to 2184 1 to 460     Submitted on the opposite strand 460/460
(100 %)
1 diff
(99.8 %id)
BQ229442 melanotic melanoma, skin .c 1732 to 2164 2 to 434   AAA   433/450
(96 %)
4 diff
(99.2 %id)
DB531652 hippocampus .c 1740 to 2178 1 to 440     Submitted on the opposite strand 440/442
(99 %)
3 diff
(99.4 %id)
AI056593 liver and spleen .c 1740 to 2180 449 to 9       441/449
(98 %)
0 diff
(100 %id)
N23311.
matches multiple genes
melanocyte .c 1745 to 2180 437 to 1     also hits gene CIB1 437/445
(98 %)
2 diff
(99.6 %id)
DB327446 Pancreas .c 1745 to 2247 501 to 1       501/547
(91 %)
10 diff
(98.2 %id)
DB563616 hypothalamus .c 1747 to 2180 7 to 448     Submitted on the opposite strand 451/448
(100 %)
58 diff
(87.1 %id)
AI051026 parathyroid gland, parathyroid tumor .c 1748 to 2180 441 to 8       434/461
(94 %)
1 diff
(99.8 %id)
DB561966 hypothalamus .c 1757 to 2180 1 to 428     Submitted on the opposite strand 428/428
(100 %)
5 diff
(98.9 %id)
AA465180 germinal center B cell .c 1758 to 2180 423 to 1       423/423
(100 %)
2 diff
(99.6 %id)
AA679968   .c 1758 to 2014 257 to 1       257/257
(100 %)
7 diff
(97.3 %id)
T49967 placenta .c 1776 to 2159 388 to 1       388/388
(100 %)
4 diff
(99.0 %id)
DB375150 placenta .c 1781 to 2180 400 to 1       400/404
(99 %)
5 diff
(98.8 %id)
AA926949 pooled germ cell tumors .c 1794 to 2180 401 to 15   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 387/387
(100 %)
0 diff
(100 %id)
FN125395 breast carcinoma .c 1804 to 1891 88 to 3     Submitted on the opposite strand 86/88
(97 %)
0 diff
(100 %id)
R94193 liver and spleen .c 1818 to 2177 372 to 6       367/375
(97 %)
8 diff
(97.9 %id)
H84208 eye, retina .c 1818 to 2166 352 to 1       352/352
(100 %)
6 diff
(98.3 %id)
AI096693 heart .c 1822 to 2101 368 to 90       279/368
(75 %)
0 diff
(100 %id)
FN083289 breast carcinoma .c 1837 to 1902 65 to 1     Submitted on the opposite strand 65/65
(100 %)
2 diff
(97.0 %id)
AA485999   .c 1846 to 2180 335 to 1     Submitted on the opposite strand 335/335
(100 %)
0 diff
(100 %id)
AA533671 normal prostatic epithelial cells, Prostate .c 1846 to 2180 352 to 18       335/352
(95 %)
0 diff
(100 %id)
AW276407 lung, two pooled squamous cell carcinomas .c 1846 to 1990 145 to 1       145/145
(100 %)
1 diff
(99.4 %id)
AA488624   .c 1847 to 1997 1 to 151     Submitted on the opposite strand 151/151
(100 %)
0 diff
(100 %id)
CB052340 leiomyosarcoma, soft tissue .c 1848 to 2180 356 to 24   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 333/333
(100 %)
1 diff
(99.7 %id)
TI_57163129   .c 1850 to 2180 67 to 396   AAA   330/1024
(32 %)
8 diff
(99.3 %id)
BU735493 eye, lens .c 1872 to 2180 327 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 309/309
(100 %)
1 diff
(99.7 %id)
BG186224   .c 1901 to 2175 279 to 5     Submitted on the opposite strand 275/288
(95 %)
0 diff
(100 %id)
AA400853   .c 1901 to 2180 294 to 1       294/341
(86 %)
16 diff
(95.4 %id)
BG188740   .c 1904 to 2174 275 to 5     Submitted on the opposite strand 271/275
(98 %)
0 diff
(100 %id)
FN114453 breast carcinoma .c 1909 to 2016 1 to 106       106/106
(100 %)
7 diff
(93.4 %id)
DC427348 placenta .c 1929 to 2180 252 to 1       252/254
(99 %)
7 diff
(97.3 %id)
FN082953 breast carcinoma .c 1934 to 2005 71 to 1     Submitted on the opposite strand 71/72
(98 %)
5 diff
(93.1 %id)
FN172494 breast carcinoma .c 1940 to 2049 1 to 110       110/111
(99 %)
4 diff
(96.4 %id)
FN099129 breast carcinoma .c 1954 to 2025 1 to 70       70/71
(98 %)
4 diff
(94.4 %id)
BF815243 colon_ins .c 1958 to 2476 525 to 7     Submitted on the opposite strand 519/557
(93 %)
0 diff
(100 %id)
AA580880 bulk germ cell seminoma .c 1973 to 2046 74 to 1       74/76
(97 %)
6 diff
(92.2 %id)
W23779 heart .c 1998 to 2180 183 to 1       183/183
(100 %)
1 diff
(99.5 %id)
AW878769 ovary .c 2015 to 2171 162 to 1       162/166
(97 %)
13 diff
(92.2 %id)
AW878724 ovary .c 2018 to 2171 10 to 163       154/163
(94 %)
10 diff
(93.9 %id)
AW878766 ovary .c 2029 to 2171 15 to 156       142/156
(91 %)
6 diff
(96.2 %id)
AW878633 ovary .c 2030 to 2171 14 to 155       142/155
(91 %)
6 diff
(96.2 %id)
AW878765 ovary .c 2030 to 2171 14 to 155       142/155
(91 %)
6 diff
(96.2 %id)
AW878768 ovary .c 2030 to 2138 12 to 119       108/119
(90 %)
6 diff
(95.0 %id)
AW878770 ovary .c 2030 to 2171 11 to 152       142/152
(93 %)
9 diff
(94.1 %id)
AW878630 ovary .c 2034 to 2171 138 to 1       138/138
(100 %)
1 diff
(99.3 %id)
FN161805 breast carcinoma .c 2036 to 2153 1 to 118       118/118
(100 %)
3 diff
(97.5 %id)
BM740286 Ascites, stomach .c 2051 to 2180 1 to 128   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 128/128
(100 %)
2 diff
(98.5 %id)
FN082239 breast carcinoma .c 2068 to 2179 1 to 111       111/111
(100 %)
1 diff
(99.1 %id)
BM967063 Islets of Langerhans, Pancreas .c 2068 to 2176 1 to 109       109/109
(100 %)
0 diff
(100 %id)
EC477033 Prostate .c 2082 to 2178 95 to 3       93/99
(93 %)
0 diff
(100 %id)
EC551225 Prostate .c 2082 to 2178 98 to 4       95/102
(93 %)
0 diff
(100 %id)
DA397715 thalamus .d 1 to 591 2 to 591   tiling clone, capped   590/590
(100 %)
1 diff
(99.9 %id)
BC022273 lung .d 4 to 2112 1 to 2109 V486I tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 2109/2111
(99 %)
2 diff
(100.0 %id)
DA484705 brain .d 5 to 472 2 to 469   capped   468/468
(100 %)
2 diff
(99.6 %id)
DA619724   .d 5 to 594 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA748770   .d 5 to 571 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA590814 lung .d 6 to 573 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
DA278255 corpus callosum .d 7 to 510 2 to 506   capped   505/505
(100 %)
2 diff
(99.7 %id)
DA367053 subthalamic nucleus .d 7 to 563 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB491454 hypothalamus .d 7 to 417 1 to 411       411/411
(100 %)
1 diff
(99.8 %id)
DA162816 amygdala .d 9 to 595 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
CN429138 embryonic stem cells, DMSO-treated H9 cellline .d 11 to 578 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BU943794 mixed (pool of 40 RNAs) .d 12 to 332 1 to 321       321/363
(88 %)
3 diff
(99.2 %id)
DA926418 small intestine .d 12 to 591 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA173037 amygdala .d 14 to 581 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BP338042 Spleen .d 15 to 594 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA615579   .d 17 to 572 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BP196751 adrenal gland .d 18 to 600 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DB492577 hypothalamus .d 18 to 458 1 to 441       441/441
(100 %)
15 diff
(96.6 %id)
DA016662 adrenal gland .d 19 to 571 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA151835 amygdala .d 19 to 580 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA178319 amygdala .d 19 to 535 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DA270339 caudate nucleus .d 19 to 573 2 to 558   capped   557/557
(100 %)
4 diff
(99.3 %id)
DB270174 uterus .d 19 to 557 2 to 540   capped   539/548
(98 %)
1 diff
(99.9 %id)
DA002410   .d 21 to 588 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA689949   .d 21 to 553 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB059863 testis .d 21 to 552 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA649906   .d 23 to 582 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB036729 testis .d 23 to 587 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA031302   .d 24 to 500 2 to 478   capped   477/477
(100 %)
0 diff
(100 %id)
DA168739 amygdala .d 24 to 539 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
DA198873 brain .d 24 to 592 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA203771 brain .d 24 to 591 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB036903 testis .d 24 to 594 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
CR608008 Placenta Cot 25-normalized .d 33 to 2081 1 to 2049   tiling clone,   2049/2049
(100 %)
0 diff
(100 %id)
BX378040 Placenta Cot 25-normalized .d 33 to 1038 1 to 1007   fully sequenced,   1007/1007
(100 %)
7 diff
(99.4 %id)
DA002564   .d 42 to 610 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BQ050009 lymph, lymphoma, cell line .d 81 to 944 2 to 867       866/968
(89 %)
13 diff
(98.7 %id)
FN166654 breast carcinoma .d 97 to 193 1 to 100       100/100
(100 %)
3 diff
(97.0 %id)
DB194339 ovary, tumor tissue .d 190 to 755 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BE563930 bone marrow, from chronic myelogenous leukemia .d 199 to 819 1 to 615       613/791
(77 %)
19 diff
(97.6 %id)
BU160844 bone marrow, from acute myelogenous leukemia .d 239 to 1039 1 to 801       801/802
(99 %)
6 diff
(99.3 %id)
BX356628 Placenta Cot 25-normalized .d 1037 to 2081 1043 to 1   fully sequenced,   1043/1043
(100 %)
4 diff
(99.7 %id)
TI_57176758   .e 1 to 701 69 to 769 L23* tiling clone,   706/769
(91 %)
13 diff
(98.4 %id)
DA107743 cerebellum .f 1 to 547 2 to 548   tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
AK055289 brain .f 247 to 3326 1 to 3080 exact tiling clone, available from FLJ,   3080/3080
(100 %)
2 diff
(100.0 %id)
DA512913 brain .f 248 to 749 2 to 503   capped   502/502
(100 %)
0 diff
(100 %id)
DA318789 hippocampus .f 413 to 971 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
BQ082447 stomach .f 971 to 1265 1 to 295       295/295
(100 %)
0 diff
(100 %id)
BX951165   .f 1235 to 1521 1 to 287       287/287
(100 %)
0 diff
(100 %id)
DB316548 brain .f 2789 to 3326 538 to 1       538/538
(100 %)
2 diff
(99.7 %id)
AA613471 colon, colon tumor RER+ .g 1 to 546 550 to 6 G9A L10S K19R M20C L22F ... tiling clone,   545/550
(99 %)
7 diff
(98.8 %id)
BP346763 brain .h 1 to 576 1 to 576 I107S Q108R K109N L110* tiling clone,   576/583
(98 %)
4 diff
(99.4 %id)
DA695685   .i 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA081624 cerebellum .i 4 to 569 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA257989 caudate nucleus .i 4 to 591 2 to 589   tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
BE219738 carcinoid, lung .i 91 to 484 1 to 394     Submitted on the opposite strand 394/394
(100 %)
2 diff
(99.5 %id)
BE348353 carcinoid, lung .i 91 to 484 1 to 394     Submitted on the opposite strand 394/394
(100 %)
0 diff
(100 %id)
CB130275 Liver .i 183 to 456 1 to 274       274/274
(100 %)
2 diff
(99.3 %id)
BG401360 Kidney .j 1 to 686 1 to 679 K22R E23N L24* tiling clone,   679/717
(94 %)
16 diff
(97.8 %id)
AV764354 bone marrow .k 1 to 455 5 to 455 exact tiling clone,   455/455
(100 %)
3 diff
(99.4 %id)
DB251268 uterus .k 8 to 560 2 to 555 T18I capped   554/554
(100 %)
3 diff
(99.5 %id)
BX096340 pooled germ cell tumors .k 9 to 399 1 to 391 exact     391/391
(100 %)
0 diff
(100 %id)
AK001025 whole embryo, mainly head .k 10 to 1825 1 to 1817 exact tiling clone, available from FLJ,   1817/1817
(100 %)
3 diff
(99.9 %id)
AU118422 whole embryo, mainly head .k 11 to 879 2 to 860 exact capped   859/859
(100 %)
16 diff
(98.2 %id)
C15323   .k 43 to 266 1 to 224       224/228
(98 %)
2 diff
(99.2 %id)
CN357749 embryonic stem cells, DMSO-treated H9 cellline .k 113 to 889 9 to 785       777/785
(98 %)
6 diff
(99.3 %id)
BQ315444 epid_tumor .k 178 to 287 129 to 18       112/129
(86 %)
0 diff
(100 %id)
BF772438 epid_tumor .k 181 to 546 366 to 1     Submitted on the opposite strand 366/366
(100 %)
0 diff
(100 %id)
BG113676 Bone, osteosarcoma, cell line .k 1120 to 1836 1 to 721       721/722
(99 %)
32 diff
(95.6 %id)
AW024617 Kidney .k 1182 to 1829 649 to 1   tiling clone,   649/649
(100 %)
14 diff
(97.9 %id)
AU144991 whole embryo, mainly head .k 1241 to 1825 584 to 1       584/587
(99 %)
23 diff
(96.1 %id)
AI342058 pooled germ cell tumors .k 1340 to 1826 487 to 1       487/488
(99 %)
2 diff
(99.6 %id)
AA514355 colon .k 1365 to 1826 462 to 1   tiling clone,   462/462
(100 %)
9 diff
(98.1 %id)
BF223699 pooled germ cell tumors .k 1371 to 1828 458 to 1       458/458
(100 %)
2 diff
(99.6 %id)
D60835   .k 1409 to 1825 415 to 1       415/417
(99 %)
5 diff
(98.9 %id)
AA830511 germinal center B cell .k 1550 to 1825 290 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 275/275
(100 %)
5 diff
(98.2 %id)
FN047505 breast carcinoma .k 1693 to 1776 1 to 82       82/83
(98 %)
4 diff
(95.2 %id)
DA451324 tongue, tumor tissue .l-u 1 to 560 2 to 562   tiling clone, capped   561/561
(100 %)
2 diff
(99.7 %id)
DA495189 brain .l-u 261 to 834 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
W90235 liver and spleen .l-u 366 to 825 1 to 462       462/462
(100 %)
2 diff
(99.6 %id)
DB130942 thymus .l-u 774 to 1335 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
W90448 liver and spleen .l-u 871 to 1344 474 to 1   tiling clone,   474/474
(100 %)
3 diff
(99.4 %id)
H30749 brain .l-u 1208 to 1684 1 to 484   tiling clone,   484/486
(99 %)
11 diff
(97.8 %id)
DA668883 esophagus .l-u 1568 to 2119 2 to 555   tiling clone, capped   554/554
(100 %)
2 diff
(99.7 %id)
DA070150 cerebellum .l-u 1841 to 2407 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
H59509 liver and spleen .l-u 2444 to 2832 1 to 396   tiling clone,   396/417
(94 %)
8 diff
(98.1 %id)
BX094615 liver and spleen .l-u 2445 to 3206 1 to 762   tiling clone,   762/762
(100 %)
3 diff
(99.7 %id)
AL046172 testis .l-u 2646 to 3161 1 to 516   fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 516/516
(100 %)
1 diff
(99.9 %id)
H23797 brain .l-u 2737 to 3103 1 to 368       368/368
(100 %)
4 diff
(99.0 %id)
CR743093 brain .l-u 2738 to 3503 1 to 766 exact tiling clone,   766/766
(100 %)
6 diff
(99.3 %id)
AL046173 testis .l-u 3131 to 3770 652 to 16   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 637/637
(100 %)
2 diff
(99.7 %id)
DB315597 brain .l-u 3237 to 3770 534 to 1       534/534
(100 %)
1 diff
(99.9 %id)
DB297475 cerebellum .l-u 3241 to 3770 530 to 1   tiling clone,   530/530
(100 %)
0 diff
(100 %id)
H23784 brain .l-u 3249 to 3770 521 to 5       517/523
(98 %)
0 diff
(100 %id)
BP397019 pancreatic islet .l-u 3274 to 3770 1 to 497     Submitted on the opposite strand 497/497
(100 %)
1 diff
(99.8 %id)
H28166 brain .l-u 3325 to 3749 435 to 1       435/442
(98 %)
22 diff
(95.1 %id)
H60384 liver and spleen .l-u 3382 to 3768 400 to 8       393/407
(96 %)
0 diff
(100 %id)
DA293461 hippocampus .m 1 to 566 5 to 572 exact tiling clone, capped   571/571
(100 %)
2 diff
(99.7 %id)
BY798923 eye .m 447 to 914 1 to 468   tiling clone,   468/468
(100 %)
0 diff
(100 %id)
BF965277 muscle (skeletal) .n-u 1 to 637 1 to 639 exact tiling clone,   639/640
(99 %)
5 diff
(99.3 %id)
DA343203 substantia nigra .o 1 to 596 2 to 597 exact tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
CB108690 Liver .p 1 to 489 5 to 493 exact tiling clone,   493/493
(100 %)
1 diff
(99.8 %id)
DB051130 testis .p 6 to 591 2 to 588   tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
DA581972 lung .q 1 to 567 8 to 575 C46L G47W L48F K49E I50N ... tiling clone, capped   574/574
(100 %)
3 diff
(99.5 %id)
CB130550 Liver .q 1 to 413 1 to 413 exact tiling clone,   413/413
(100 %)
0 diff
(100 %id)
DA203121 brain .q 2 to 570 2 to 571 exact capped   570/571
(99 %)
5 diff
(99.2 %id)
DA835623 placenta .r 1 to 547 2 to 548 E23G tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
DN994053 brain, whole brain .r 9 to 496 9 to 496 exact tiling clone,   488/496
(98 %)
6 diff
(98.8 %id)
AK316497 ovary, tumor tissue Gene FARSB, variant not shown         Suspected internal deletion, this clone was ignored    
BC011261 Brain, anaplastic oligodendroglioma with1p/19q loss Gene FARSB, variant not shown       available from MGC, AAA This clone was ignored    
DC413674 ovary, tumor tissue Gene FARSB, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n-u, .o, .p, .q, .r Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC