To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene IFI27L2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
93 supporting clones for gene IFI27L2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BQ183045 Knee, Osteoarthritic Cartilage .a 1 to 513 529 to 19 P5L C6A F7S P8L P10L ... tiling clone, AAA   511/511
(100 %)
2 diff
(99.7 %id)
BP335839 coronary artery .a 18 to 505 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
W52706 senescent fibroblast .a 43 to 516 1 to 473   tiling clone, AAA   473/473
(100 %)
8 diff
(98.4 %id)
BI964240 Islets of Langerhans, Pancreas .a 66 to 171 1 to 106   fully sequenced,   106/106
(100 %)
0 diff
(100 %id)
BI963919 Islets of Langerhans, Pancreas .a 110 to 513 416 to 13   fully sequenced, AAA   404/404
(100 %)
0 diff
(100 %id)
AA418284 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1 to 427 1 to 424   tiling clone, Submitted on the opposite strand 424/424
(100 %)
9 diff
(97.9 %id)
AJ708984 heart .b 18 to 374 359 to 1     Submitted on the opposite strand 359/366
(98 %)
2 diff
(99.5 %id)
CD108025 brain, Pituitary .b 19 to 512 1 to 494 exact     494/495
(99 %)
1 diff
(99.8 %id)
BP335500 coronary artery .b 31 to 497 1 to 467 A5T S24N G57E V60M G67V ...     467/474
(98 %)
17 diff
(96.5 %id)
BP350347 brain .b 41 to 504 1 to 464 exact     464/464
(100 %)
2 diff
(99.6 %id)
BE737110 adenocarcinoma, Pancreas .b 45 to 490 1 to 445       445/779
(57 %)
5 diff
(99.4 %id)
BQ962754 epithelioid carcinoma cell line, Pancreas .b 47 to 512 1 to 466 exact tiling clone, AAA   466/466
(100 %)
0 diff
(100 %id)
NM_032036.2   .b 47 to 515 1 to 469 exact RefSeq,   469/469
(100 %)
2 diff
(99.6 %id)
BP347059 brain .b 53 to 512 1 to 460 exact     460/583
(78 %)
5 diff
(99.2 %id)
BE736297 adenocarcinoma, Pancreas .b 60 to 512 1 to 453 P121X AAA   453/453
(100 %)
2 diff
(99.6 %id)
BU596980 mixed (pool of 40 RNAs) .b 60 to 458 1 to 405       405/954
(42 %)
14 diff
(98.6 %id)
BP200290 amygdala .b 65 to 504 1 to 438 A46Q A47P I48L A49P N50T ...     438/438
(100 %)
10 diff
(97.8 %id)
BP206171 coronary artery .b 65 to 513 1 to 449 exact     449/449
(100 %)
2 diff
(99.6 %id)
BP234921 coronary artery .b 65 to 504 1 to 440 exact     440/440
(100 %)
4 diff
(99.1 %id)
BP249075 Kidney .b 65 to 504 1 to 440 exact     440/440
(100 %)
5 diff
(98.9 %id)
CB127413 cervix, Uterine .b 66 to 509 1 to 444 exact     444/444
(100 %)
1 diff
(99.8 %id)
DB466989 hippocampus .b 66 to 482 1 to 417       417/417
(100 %)
2 diff
(99.6 %id)
BP336077 coronary artery .b 66 to 504 1 to 439 exact     439/439
(100 %)
1 diff
(99.8 %id)
BP337552 coronary artery .b 66 to 504 1 to 439 A5S     439/439
(100 %)
5 diff
(98.9 %id)
BP358423 mammary gland .b 66 to 492 1 to 427       427/436
(97 %)
1 diff
(99.8 %id)
BE962796 adenocarcinoma, ovary .b 70 to 512 460 to 16 V10M A13T V16M A25C M26P ... AAA   445/445
(100 %)
22 diff
(95.1 %id)
CD672554 eye, Iris .b 75 to 512 1 to 438 exact fully sequenced, AAA   438/438
(100 %)
0 diff
(100 %id)
BP360793 thalamus .b 77 to 504 1 to 428 exact     428/428
(100 %)
2 diff
(99.6 %id)
BP198125 adrenal gland .b 78 to 513 1 to 436 exact     436/436
(100 %)
0 diff
(100 %id)
BP216401 corpus callosum .b 78 to 504 1 to 426 exact     426/426
(100 %)
5 diff
(98.9 %id)
DB491187 hypothalamus .b 78 to 497 1 to 420 exact     420/420
(100 %)
0 diff
(100 %id)
BP246743 Kidney .b 78 to 504 1 to 427 exact     427/427
(100 %)
1 diff
(99.8 %id)
BP247107 Kidney .b 78 to 504 1 to 427 exact     427/427
(100 %)
1 diff
(99.8 %id)
CB129623 Liver .b 78 to 509 1 to 432 exact     432/432
(100 %)
0 diff
(100 %id)
BP351942   .b 78 to 504 1 to 427 exact     427/427
(100 %)
2 diff
(99.6 %id)
BP364025 lung .b 78 to 504 1 to 427 exact     427/427
(100 %)
3 diff
(99.3 %id)
CN263000 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 79 to 264 1 to 186       186/186
(100 %)
0 diff
(100 %id)
CD673807 eye, lens .b 80 to 513 1 to 434 A40F K41F     434/436
(99 %)
8 diff
(98.2 %id)
AF208232 hepatoma .b 81 to 510 1 to 430 exact     430/430
(100 %)
0 diff
(100 %id)
TI_57168205   .b 83 to 513 36 to 466 exact     431/899
(47 %)
10 diff
(98.9 %id)
TI_57168279   .b 83 to 512 27 to 455 V19C P20A V21R V22G L23A ... AAA   429/455
(94 %)
7 diff
(98.5 %id)
DN989997 brain, whole brain .b 83 to 512 9 to 438 exact AAA   430/438
(98 %)
6 diff
(98.7 %id)
BC032626 Pancreas, Spleen, adult pooled .b 88 to 512 1 to 425 exact available from MGC, AAA   425/425
(100 %)
0 diff
(100 %id)
BI834658 pooled pancreas and spleen .b 88 to 513 1 to 426 exact     426/859
(49 %)
6 diff
(99.4 %id)
CK819950 Islets of Langerhans, Pancreas .b 88 to 512 435 to 11 exact AAA   425/433
(98 %)
0 diff
(100 %id)
BI834694 pooled pancreas and spleen .b 89 to 512 1 to 424 V19C P20A V21R V22G L23A ... AAA   424/424
(100 %)
2 diff
(99.6 %id)
BE613267 adenocarcinoma, ovary .b 90 to 456 369 to 1       369/369
(100 %)
5 diff
(98.7 %id)
BF684496 leiomyosarcoma cell line, uterus .b 90 to 512 1 to 428 A15C V16S G17V A18G V19L ... AAA   428/428
(100 %)
6 diff
(98.6 %id)
BG337287 leiomyosarcoma cell line, uterus .b 90 to 512 1 to 423 K120X P121T AAA   423/423
(100 %)
1 diff
(99.8 %id)
BG339549 leiomyosarcoma cell line, uterus .b 90 to 512 1 to 423 exact available from MGC, AAA   423/423
(100 %)
0 diff
(100 %id)
CD107374 brain, Pituitary .b 90 to 512 1 to 423 exact AAA   423/423
(100 %)
0 diff
(100 %id)
BG459122 esophagus carcinoma tissue .b 91 to 443 1 to 353       353/386
(91 %)
1 diff
(99.8 %id)
BE619050 large cell carcinoma, lung .b 91 to 512 1 to 428 P121N L123H K124S S125K E126F ... AAA   428/428
(100 %)
7 diff
(98.4 %id)
BQ939824 eye, normal pigmented retinal epithelium .b 91 to 512 1 to 422 exact     422/856
(49 %)
1 diff
(99.9 %id)
AA358277 lung .b 92 to 352 1 to 261       261/261
(100 %)
6 diff
(97.8 %id)
BM801273 embryonal carcinoma, cell line, testis .b 92 to 512 1 to 421 exact AAA   421/421
(100 %)
0 diff
(100 %id)
CD672514 eye, Iris .b 93 to 512 1 to 420 exact fully sequenced, AAA   420/420
(100 %)
0 diff
(100 %id)
BE612658 adenocarcinoma, ovary .b 93 to 508 1 to 416 exact     416/416
(100 %)
2 diff
(99.6 %id)
BE897783 melanotic melanoma, skin .b 101 to 512 1 to 413 K120X P121T L123T K124Q S125V ... AAA   413/413
(100 %)
1 diff
(99.8 %id)
DB561614 hypothalamus .b 102 to 512 1 to 411 exact   Submitted on the opposite strand 411/411
(100 %)
0 diff
(100 %id)
TI_1948090860   .b 102 to 445 131 to 477       347/1427
(24 %)
8 diff
(99.5 %id)
TI_1948091122   .b 102 to 488 129 to 515       387/1418
(27 %)
10 diff
(99.3 %id)
AA632004 breast .b 109 to 507 400 to 1       400/405
(98 %)
4 diff
(99.1 %id)
CV030738 mixed .b 110 to 494 8 to 392       385/561
(68 %)
1 diff
(99.9 %id)
AA643326 lymph node, lymphoma .b 110 to 467 357 to 1       357/357
(100 %)
2 diff
(99.5 %id)
BF127505 leiomyosarcoma cell line, uterus .b 110 to 512 1 to 404       404/404
(100 %)
3 diff
(99.3 %id)
BG577286 breast, mammary adenocarcinoma, cell line .b 110 to 513 1 to 406       406/629
(64 %)
3 diff
(99.6 %id)
CD672513 eye, Iris .b 111 to 512 418 to 17   fully sequenced, AAA   402/402
(100 %)
0 diff
(100 %id)
DB533904 hippocampus .b 111 to 512 1 to 402     Submitted on the opposite strand 402/402
(100 %)
4 diff
(99.1 %id)
AA587040 larynx .b 112 to 467 356 to 1       356/356
(100 %)
1 diff
(99.8 %id)
AI380391 B-cell, chronic lymphotic leukemia .b 125 to 513 391 to 3       389/391
(99 %)
0 diff
(100 %id)
CK819951 Islets of Langerhans, Pancreas .b 126 to 512 1 to 387       387/387
(100 %)
0 diff
(100 %id)
BC022800 Uterus, leiomyosarcoma .b 139 to 512 1 to 374   available from MGC, AAA   374/374
(100 %)
0 diff
(100 %id)
AA418321 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 141 to 512 371 to 1     Submitted on the opposite strand 371/371
(100 %)
3 diff
(99.2 %id)
AI214682 carcinoid, lung .b 151 to 511 361 to 1       361/361
(100 %)
0 diff
(100 %id)
BU927887 mixed (pool of 40 RNAs) .b 188 to 511 1 to 324       324/358
(90 %)
3 diff
(99.2 %id)
BU532465 mixed (pool of 40 RNAs) .b 192 to 510 1 to 319       319/359
(88 %)
1 diff
(99.8 %id)
AF238978   .b 213 to 512 1 to 299   AAA   299/299
(100 %)
1 diff
(99.7 %id)
BM141888 Islets of Langerhans, Pancreas .b 220 to 512 303 to 11   AAA   293/293
(100 %)
0 diff
(100 %id)
CD672553 eye, Iris .b 264 to 512 265 to 17   fully sequenced, AAA   249/249
(100 %)
0 diff
(100 %id)
CR976986 T-Lymphocytes .b 267 to 512 1 to 246   AAA   246/246
(100 %)
1 diff
(99.6 %id)
AA533695 normal prostatic epithelial cells, Prostate .b 317 to 468 1 to 152       152/152
(100 %)
5 diff
(96.8 %id)
AW973202   .b 322 to 512 1 to 191   AAA   191/191
(100 %)
2 diff
(99.0 %id)
CA413778 Chondrosarcoma Grade II, Left Pelvis .c 1 to 675 693 to 19 exact tiling clone, AAA   675/676
(99 %)
0 diff
(100 %id)
AI262287 adenocarcinoma, colon .c 222 to 676 462 to 8 exact tiling clone,   455/466
(97 %)
4 diff
(99.2 %id)
BP230577 brain .d 1 to 556 1 to 556 exact tiling clone,   556/582
(95 %)
4 diff
(99.4 %id)
BM142195 Islets of Langerhans, Pancreas .d 161 to 519 3 to 361 exact     361/361
(100 %)
0 diff
(100 %id)
BI760682 pooled colon, kidney, stomach .e 1 to 910 1 to 920 V10D G12R G13R K14* tiling clone,   920/952
(96 %)
31 diff
(96.8 %id)
BM724238 eye, fetal eye .e 19 to 740 1 to 719   tiling clone,   719/719
(100 %)
11 diff
(98.5 %id)
TI_57147827   .e 24 to 910 62 to 958       897/990
(90 %)
31 diff
(96.9 %id)
BE146144 head_neck .e 704 to 1064 15 to 374   tiling clone,   360/374
(96 %)
6 diff
(98.4 %id)
TI_151757467   .e 731 to 1533 904 to 116   tiling clone, AAA   789/859
(91 %)
24 diff
(97.3 %id)
BE146198 head_neck .e 819 to 953 7 to 145       139/152
(91 %)
10 diff
(93.5 %id)
DB208003 trachea .f 1 to 471 2 to 473 exact tiling clone, capped   472/472
(100 %)
2 diff
(99.6 %id)
BG699124 brain, hippocampus Gene IFI27L2, variant not shown       AAA This clone was ignored    
BI550984 brain, hippocampus Gene IFI27L2, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C