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Gene FAIMTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
114 supporting clones for gene FAIM back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001033030.1   .a 1 to 1524 1 to 1524 exact RefSeq, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 1524/1524
(100 %)
0 diff
(100 %id)
BM469375 embryonal carcinoma, cell line, testis .a 106 to 1050 1 to 952   tiling clone,   952/1012
(94 %)
46 diff
(95.5 %id)
NM_001033031.1   .b 1 to 1150 1 to 1150 exact RefSeq, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 1150/1150
(100 %)
0 diff
(100 %id)
BQ638715 eye, retina .b 170 to 775 4 to 609   tiling clone,   606/609
(99 %)
9 diff
(98.6 %id)
AW797299 uterus .b 297 to 557 286 to 28   tiling clone,   259/308
(84 %)
0 diff
(100 %id)
FN174199 breast carcinoma .b 362 to 432 1 to 71       71/75
(94 %)
2 diff
(97.4 %id)
BQ377394 uterus .b 395 to 557 167 to 4       164/169
(97 %)
1 diff
(99.5 %id)
AI658799 Prostate .b 647 to 1143 515 to 19   tiling clone, AAA   497/504
(98 %)
0 diff
(100 %id)
AI095903 uterus .b 709 to 1150 442 to 1   tiling clone,   442/442
(100 %)
0 diff
(100 %id)
DR003706 hippocampus .c -9 to 557 1 to 566   tiling clone,   566/566
(100 %)
10 diff
(98.3 %id)
BP216928 corpus callosum .c 5 to 588 1 to 583   tiling clone,   583/583
(100 %)
3 diff
(99.5 %id)
BG705479 brain, hippocampus .c 87 to 678 38 to 634       597/846
(70 %)
19 diff
(97.8 %id)
NM_001033032.1   .c 94 to 1183 1 to 1090 exact RefSeq, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 1090/1090
(100 %)
0 diff
(100 %id)
BM831413 stomach .c 158 to 677 1 to 520       520/520
(100 %)
0 diff
(100 %id)
BM794937 Ascites, stomach .c 171 to 678 1 to 508   tiling clone,   508/508
(100 %)
0 diff
(100 %id)
CD685601 normal nasopharynx .c 185 to 650 41 to 506       466/506
(92 %)
8 diff
(98.5 %id)
BF976805 melanotic melanoma, high MDR, skin .c 192 to 892 1 to 717       713/933
(76 %)
63 diff
(93.3 %id)
BM831786 stomach .c 195 to 503 1 to 309       309/309
(100 %)
0 diff
(100 %id)
N56793 placenta .c 200 to 499 1 to 299       299/299
(100 %)
7 diff
(97.7 %id)
BX102426 placenta .c 201 to 936 1 to 736 A117T L127S     736/736
(100 %)
2 diff
(99.8 %id)
BC012478 Testis, embryonal carcinoma .c 245 to 1183 1 to 939 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 939/939
(100 %)
0 diff
(100 %id)
BG257592 embryonal carcinoma, cell line, testis .c 246 to 939 1 to 695 F73X     695/1034
(67 %)
3 diff
(99.8 %id)
N45412 placenta .c 261 to 624 1 to 364       364/365
(99 %)
5 diff
(98.7 %id)
AA044046 uterus .c 267 to 697 1 to 440       440/440
(100 %)
15 diff
(96.6 %id)
N44290 melanocyte .c 270 to 541 1 to 270       270/270
(100 %)
2 diff
(99.3 %id)
H93589 placenta .c 272 to 526 1 to 254       254/254
(100 %)
9 diff
(96.5 %id)
N36414 melanocyte .c 726 to 1183 462 to 1       462/467
(98 %)
5 diff
(99.0 %id)
N32126 placenta .c 743 to 1183 444 to 1       444/446
(99 %)
3 diff
(99.4 %id)
N32101 placenta .c 743 to 1183 447 to 1       447/552
(80 %)
8 diff
(98.6 %id)
AA043990 uterus .c 762 to 1183 426 to 1       426/432
(98 %)
7 diff
(98.4 %id)
DB474505 hippocampus .d 1 to 481 8 to 488       488/488
(100 %)
3 diff
(99.4 %id)
AK001444   .d 1 to 921 2 to 922 exact tiling clone, available from FLJ,   922/922
(100 %)
1 diff
(99.9 %id)
NM_018147.2   .d 1 to 921 2 to 922 exact RefSeq, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 922/922
(100 %)
1 diff
(99.9 %id)
AU128511   .d 1 to 471 2 to 472   fully sequenced, capped   471/471
(100 %)
1 diff
(99.8 %id)
BM738750 Ascites, stomach .d 3 to 543 1 to 541       541/541
(100 %)
2 diff
(99.7 %id)
BM023482 Islets of Langerhans, Pancreas .d 23 to 462 1 to 440   fully sequenced,   440/440
(100 %)
3 diff
(99.4 %id)
BM719902 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 67 to 506 1 to 440       440/440
(100 %)
7 diff
(98.5 %id)
BQ777365 Pancreas, Purified pancreatic islet .d 81 to 512 1 to 433   fully sequenced,   433/433
(100 %)
3 diff
(99.4 %id)
TI_1948152821   .d 84 to 629 120 to 665       546/566
(96 %)
5 diff
(99.2 %id)
TI_1948152951   .d 84 to 647 119 to 681 S143I E176D I177M A178Q S179V     563/1428
(39 %)
18 diff
(98.8 %id)
TI_1948152547   .d 85 to 640 121 to 676 exact     556/582
(95 %)
10 diff
(98.3 %id)
TI_1948152673   .d 85 to 608 122 to 645       524/545
(96 %)
5 diff
(99.1 %id)
EL951732 eyeball .d 86 to 714 20 to 647 exact     628/647
(97 %)
8 diff
(98.8 %id)
CR457122   .d 92 to 631 1 to 540 N66S A117T     540/540
(100 %)
2 diff
(99.7 %id)
BG261141 bladder, transitional cell papilloma, cell line .d 92 to 810 1 to 724 exact     724/851
(85 %)
20 diff
(97.7 %id)
CD677046 eye, Trabecular meshwork .d 94 to 660 1 to 567       567/567
(100 %)
0 diff
(100 %id)
AA477027 ovarian tumor, ovary .d 135 to 512 1 to 376   fully sequenced,   376/376
(100 %)
0 diff
(100 %id)
AI190311   .d 224 to 924 702 to 1       702/702
(100 %)
4 diff
(99.5 %id)
AW118945 pooled .d 224 to 924 701 to 1       701/701
(100 %)
4 diff
(99.5 %id)
BM703907 eye, Retina Foveal and Macular .d 229 to 704 1 to 476   fully sequenced, Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 476/476
(100 %)
0 diff
(100 %id)
BE540888 cervix .d 232 to 792 1 to 560       560/693
(80 %)
16 diff
(97.7 %id)
BE181794 head_neck .d 237 to 585 381 to 33     Submitted on the opposite strand 349/381
(91 %)
20 diff
(94.8 %id)
AA099194 uterus .d 237 to 541 1 to 308   fully sequenced,   308/308
(100 %)
4 diff
(98.8 %id)
BM676763 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 242 to 921 698 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 680/680
(100 %)
0 diff
(100 %id)
CB163156 Liver .d 247 to 837 1 to 591       591/591
(100 %)
0 diff
(100 %id)
TI_149315512   .d 269 to 921 735 to 86   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 650/770
(84 %)
3 diff
(99.7 %id)
AI084669 senescent fibroblast .d 275 to 921 663 to 17   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 647/647
(100 %)
3 diff
(99.6 %id)
AW418745 pooled .d 275 to 914 650 to 11       640/650
(98 %)
2 diff
(99.7 %id)
BQ045388 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 290 to 921 649 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 631/631
(100 %)
1 diff
(99.9 %id)
EL948488 eyeball .d 325 to 921 49 to 646   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 598/646
(92 %)
8 diff
(98.8 %id)
AW975467   .d 344 to 920 577 to 1     Submitted on the opposite strand 577/577
(100 %)
3 diff
(99.5 %id)
BU689607 Human Lung Epithelial cells, lung .d 371 to 921 569 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 551/551
(100 %)
0 diff
(100 %id)
BU738945 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 373 to 921 567 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 549/549
(100 %)
0 diff
(100 %id)
BM693383 eye, Retina Foveal and Macular .d 390 to 512 1 to 123   fully sequenced, Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 123/123
(100 %)
0 diff
(100 %id)
AA662664 normal prostate, Prostate .d 392 to 902 512 to 1       512/512
(100 %)
19 diff
(96.3 %id)
BM023199 Islets of Langerhans, Pancreas .d 401 to 928 534 to 6   fully sequenced,   529/534
(99 %)
0 diff
(100 %id)
BG203946   .d 428 to 926 1 to 499       499/781
(63 %)
10 diff
(98.8 %id)
AI741472 pooled .d 431 to 921 500 to 12   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 489/489
(100 %)
2 diff
(99.6 %id)
TI_151703361   .d 431 to 923 578 to 85       494/1136
(43 %)
2 diff
(99.9 %id)
AA885228 pooled .d 432 to 921 490 to 1       490/490
(100 %)
0 diff
(100 %id)
BG213402   .d 433 to 921 7 to 495   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 489/495
(98 %)
7 diff
(98.6 %id)
BG188524   .d 434 to 596 50 to 212       163/213
(76 %)
8 diff
(96.3 %id)
BG207632   .d 436 to 929 49 to 542   tiling clone,   494/569
(86 %)
23 diff
(96.0 %id)
BG210790   .d 440 to 728 1 to 289       289/289
(100 %)
1 diff
(99.7 %id)
AU150792   .d 441 to 921 480 to 1   fully sequenced,   480/480
(100 %)
3 diff
(99.4 %id)
BQ788044 Pancreas, Purified pancreatic islet .d 451 to 928 480 to 2   fully sequenced,   479/480
(99 %)
0 diff
(100 %id)
BM668657 eye, Retina Foveal and Macular .d 451 to 921 489 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 471/471
(100 %)
0 diff
(100 %id)
DB543322 hippocampus .d 456 to 921 1 to 466     Submitted on the opposite strand 466/466
(100 %)
2 diff
(99.6 %id)
AI961790 thymus, pooled .d 456 to 920 463 to 1       463/463
(100 %)
3 diff
(99.4 %id)
AI375069   .d 459 to 921 475 to 13   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 463/463
(100 %)
1 diff
(99.8 %id)
AA476917 ovarian tumor, ovary .d 464 to 921 458 to 1   fully sequenced,   458/458
(100 %)
0 diff
(100 %id)
BG194722   .d 481 to 906 11 to 435       425/435
(97 %)
6 diff
(98.7 %id)
AA854898 parathyroid gland, parathyroid tumor .d 482 to 921 462 to 23   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 440/440
(100 %)
3 diff
(99.4 %id)
AI050744 senescent fibroblast .d 482 to 921 455 to 15   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 441/441
(100 %)
2 diff
(99.6 %id)
AI339589 adenocarcinoma, colon .d 482 to 926 445 to 1       445/445
(100 %)
0 diff
(100 %id)
AI745532 Prostate .d 486 to 921 447 to 12   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 436/436
(100 %)
0 diff
(100 %id)
BG220208   .d 489 to 906 416 to 1     Submitted on the opposite strand 416/416
(100 %)
8 diff
(98.1 %id)
AA099588 uterus .d 511 to 921 411 to 1   fully sequenced,   411/411
(100 %)
0 diff
(100 %id)
AI991755 adenocarcinoma, Pancreas .d 521 to 921 401 to 1       401/401
(100 %)
0 diff
(100 %id)
CD676603 eye, Trabecular meshwork .d 544 to 921 1 to 378       378/382
(98 %)
14 diff
(96.4 %id)
BM689613 eye, Retina Foveal and Macular .d 545 to 921 1 to 377   fully sequenced, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 377/377
(100 %)
0 diff
(100 %id)
D59258   .d 646 to 921 270 to 1       270/270
(100 %)
7 diff
(97.5 %id)
AA026797 heart .d 652 to 925 275 to 1       275/275
(100 %)
1 diff
(99.7 %id)
BM664076 eye, Retina Foveal and Macular .d 674 to 921 266 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 248/248
(100 %)
0 diff
(100 %id)
AI565214 pooled .d 680 to 921 242 to 1       242/242
(100 %)
0 diff
(100 %id)
AA688289 germinal center B cell .d 688 to 866 179 to 1       179/179
(100 %)
0 diff
(100 %id)
D80015 brain .d 692 to 920 225 to 1       225/225
(100 %)
4 diff
(98.3 %id)
BM661587 eye, Retina Foveal and Macular .d 697 to 890 194 to 1   fully sequenced, Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 194/194
(100 %)
0 diff
(100 %id)
GD149603   .d 750 to 921 1 to 172   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 172/172
(100 %)
4 diff
(97.7 %id)
AA026060 heart .d 757 to 921 165 to 1       165/165
(100 %)
0 diff
(100 %id)
EC572738 Prostate .d 833 to 922 7 to 97       91/97
(93 %)
6 diff
(93.9 %id)
AK125477 brain .e 1 to 3160 2 to 3161 exact tiling clone, available from FLJ,   3161/3161
(100 %)
7 diff
(99.8 %id)
DA800371 brain .e 1 to 584 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
AI002737 schizophrenic brain S-11 frontal lobe .e 25 to 308 1 to 284     Submitted on the opposite strand 284/284
(100 %)
8 diff
(97.2 %id)
N48486.
matches multiple genes
multiple sclerosis lesions .e 92 to 317 1 to 221     also hits gene TAP2andHLA-DOB 221/221
(100 %)
6 diff
(97.3 %id)
BF208042 bladder, carcinoma, cell line .e 158 to 760 1 to 598   tiling clone,   598/676
(88 %)
11 diff
(98.4 %id)
CN280389 embryonic stem cells, DMSO-treated H9 cellline .e 160 to 302 1 to 143       143/143
(100 %)
1 diff
(99.4 %id)
CN276779 embryonic stem cells, DMSO-treated H9 cellline .e 182 to 700 1 to 519       519/519
(100 %)
3 diff
(99.5 %id)
BQ231372 embryonal carcinoma, cell line, testis .e 200 to 703 1 to 513       513/1331
(38 %)
17 diff
(98.8 %id)
CN280390 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 206 to 715 1 to 510   tiling clone,   510/510
(100 %)
0 diff
(100 %id)
EC569779 Prostate .e 226 to 284 1 to 57       57/109
(52 %)
2 diff
(98.2 %id)
DA668704 esophagus .e 1266 to 1833 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AW800652 uterus .e 1733 to 2005 278 to 5   tiling clone,   274/339
(80 %)
0 diff
(100 %id)
CX788415 human embryonic stem cells .e 2409 to 3288 24 to 903   tiling clone,   880/903
(97 %)
6 diff
(99.4 %id)
DB322181 esophagus .e 2607 to 3160 554 to 1       554/554
(100 %)
1 diff
(99.9 %id)
CA841096 Pancreas, Purified pancreatic islet .e 2621 to 3161 541 to 1       541/541
(100 %)
0 diff
(100 %id)
CN426442 embryonic stem cells, DMSO-treated H9 cellline .f 1 to 771 1 to 770 A109T tiling clone,   770/770
(100 %)
3 diff
(99.7 %id)
CR976771 T-Lymphocytes .g-u 1 to 411 1 to 412 S6L A7G R8Q A10S R11K ... tiling clone,   412/416
(99 %)
2 diff
(99.6 %id)
AV725889 hypothalamus .h 1 to 344 1 to 344 exact tiling clone,   344/344
(100 %)
0 diff
(100 %id)
BE765628 nervous_tumor .i 1 to 385 1 to 385 exact tiling clone,   385/385
(100 %)
0 diff
(100 %id)
FN102899 breast carcinoma .j-u 1 to 82 1 to 81   tiling clone,   81/81
(100 %)
6 diff
(92.6 %id)
BF224082 carcinoid, lung .j-u 81 to 667 587 to 1   tiling clone,   587/587
(100 %)
0 diff
(100 %id)
BE970197 Pancreas .j-u 129 to 670 1 to 545       545/553
(98 %)
9 diff
(98.4 %id)
AI858595 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .j-u 152 to 663 522 to 11   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 512/512
(100 %)
0 diff
(100 %id)
BM667343 eye, fetal eyes .j-u 208 to 663 474 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 456/458
(99 %)
0 diff
(100 %id)
AV729467 hypothalamus Gene FAIM, variant not shown         Suspected internal deletion, this clone was ignored    
AA121015 lung, lung carcinoma Gene FAIM, variant not shown       fully sequenced, This clone was ignored    
AA126463 lung, lung carcinoma Gene FAIM, variant not shown       fully sequenced, This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C