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Gene F9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene F9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_000133.3   .a 1 to 2798 5 to 2802 exact RefSeq,   2802/2802
(100 %)
0 diff
(100 %id)
DB184080 liver, tumor tissue .a 1 to 558 2 to 562   tiling clone, capped   561/561
(100 %)
4 diff
(99.3 %id)
DR003814 Liver .a 14 to 703 1 to 690       690/690
(100 %)
4 diff
(99.5 %id)
AV690464 hepatocellular carcinoma .a 15 to 680 1 to 608     Suspected internal deletion 608/631
(96 %)
30 diff
(95.3 %id)
AV687276 hepatocellular carcinoma .a 19 to 591 1 to 570       570/638
(89 %)
11 diff
(98.3 %id)
A13997   .a 25 to 1660 1 to 1634 exact     1634/1639
(99 %)
4 diff
(99.8 %id)
BX495480 Liver .a 25 to 562 1 to 538       538/538
(100 %)
4 diff
(99.3 %id)
BX495491 Liver .a 25 to 512 1 to 488       488/488
(100 %)
6 diff
(98.8 %id)
J00137 Liver .a 25 to 1660 1 to 1634 exact     1634/1639
(99 %)
3 diff
(99.9 %id)
AK292749 liver, tumor tissue .a 26 to 1800 1 to 1775 exact     1775/1775
(100 %)
0 diff
(100 %id)
J00136 Liver .a 26 to 1459 1 to 1437 G13S A74P R83K T194A S204P ...     1437/1437
(100 %)
9 diff
(99.4 %id)
M11309   .a 26 to 2798 1 to 2775 exact tiling clone,   2775/2775
(100 %)
2 diff
(100.0 %id)
DB185173 liver, tumor tissue .a 27 to 581 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
A22493   .a 28 to 2797 8 to 2779       2772/2781
(99 %)
16 diff
(99.5 %id)
AV685937 hepatocellular carcinoma .a 33 to 666 1 to 577     Suspected internal deletion 577/626
(92 %)
15 diff
(97.7 %id)
M35672   .a 131 to 1003 1 to 873       873/873
(100 %)
0 diff
(100 %id)
A22478   .a 417 to 545 1 to 129       129/129
(100 %)
0 diff
(100 %id)
CD607649   .a 741 to 1462 18 to 742       725/742
(97 %)
5 diff
(99.4 %id)
CD607650   .a 774 to 1456 675 to 1       675/675
(100 %)
8 diff
(98.9 %id)
CB157484 Liver .a 793 to 1338 1 to 546       546/546
(100 %)
0 diff
(100 %id)
T28608 Liver .a 883 to 1104 1 to 222       222/222
(100 %)
0 diff
(100 %id)
AV647038 corresponding non cancerous liver tissue .a 1527 to 1899 1 to 373     Submitted on the opposite strand 373/373
(100 %)
0 diff
(100 %id)
AV647182 corresponding non cancerous liver tissue .a 1527 to 1899 1 to 373     Submitted on the opposite strand 373/374
(99 %)
1 diff
(99.8 %id)
CB156936 Liver .a 1554 to 2085 1 to 532       532/532
(100 %)
3 diff
(99.5 %id)
BX405727 fetal liver, Liver .a 1821 to 2768 943 to 1   tiling clone,   943/943
(100 %)
41 diff
(95.7 %id)
BX414387 fetal liver, Liver .a 2276 to 2788 513 to 4       510/515
(99 %)
0 diff
(100 %id)
AB186358 Liver .b 1 to 1271 2 to 1272 exact tiling clone,   1272/1272
(100 %)
0 diff
(100 %id)
BX448845 fetal liver, Liver .c 1 to 799 4 to 820 L56X R76X A83S tiling clone,   713/828
(86 %)
35 diff
(95.8 %id)
AV656454 corresponding non cancerous liver tissue Gene F9, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV684051 hepatocellular carcinoma Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
AV695793 hepatocellular carcinoma Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
AV695911 hepatocellular carcinoma Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
AV698079 hepatocellular carcinoma Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
AV689501 hepatocellular carcinoma Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
AV694632 hepatocellular carcinoma Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
AV696892 hepatocellular carcinoma Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
BC109214 PCR rescued clones Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
BC109215 PCR rescued clones Gene F9, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI