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Gene PAQR8andEFHC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
525 representative clones for gene PAQR8andEFHC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_018100.3   .a 1 to 5579 2 to 5580 exact RefSeq, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 5580/5580
(100 %)
0 diff
(100 %id)
EU520261   .a 115 to 2232 1 to 2117 exact tiling clone, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 2117/2117
(100 %)
5 diff
(99.8 %id)
AK001328   .a 118 to 2216 5 to 2103 A399T tiling clone, available from FLJ,   2099/2099
(100 %)
2 diff
(100.0 %id)
CR606154 B cells (Ramos cell line) Cot 25-normalized .a 121 to 2182 1 to 2062 exact     2062/2062
(100 %)
0 diff
(100 %id)
AL560717 B cells from Burkitt lymphoma .a 121 to 1121 1 to 996       996/996
(100 %)
7 diff
(99.3 %id)
BM468893 embryonal carcinoma, cell line, testis .a 122 to 1103 29 to 1013       985/1013
(97 %)
16 diff
(98.5 %id)
BC020210 Kidney, renal cell adenocarcinoma .a 124 to 2216 1 to 2093 R285I I619L available from MGC, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 2093/2093
(100 %)
2 diff
(100.0 %id)
AL526738 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 158 to 1129 1 to 967       967/967
(100 %)
13 diff
(98.7 %id)
BC012921 Liver, adenocarcinoma .a 176 to 2304 1 to 2128 D408T V409L I410L M412C L413W ... tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 2128/2128
(100 %)
2 diff
(100.0 %id)
CD299884 testis .a 181 to 1026 1 to 856       856/856
(100 %)
24 diff
(97.2 %id)
TI_1948139565   .a 211 to 1239 126 to 1161       1036/1296
(79 %)
46 diff
(96.5 %id)
TI_1948139809   .a 211 to 1073 126 to 991       866/1303
(66 %)
22 diff
(98.4 %id)
TI_1948140319   .a 211 to 1125 119 to 1052       934/1336
(69 %)
22 diff
(98.4 %id)
AA454139   .a 792 to 1093 1 to 302       302/302
(100 %)
0 diff
(100 %id)
H12041 whole brain .a 813 to 1264 1 to 461     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 461/523
(88 %)
15 diff
(97.2 %id)
F05717 brain, total brain .a 815 to 1034 12 to 231       220/231
(95 %)
5 diff
(97.9 %id)
F05720 brain, total brain .a 817 to 1093 13 to 289       277/289
(95 %)
6 diff
(98.0 %id)
F07044 brain, total brain .a 817 to 1142 14 to 339       326/339
(96 %)
6 diff
(98.3 %id)
Z46111 brain, total brain .a 817 to 1150 15 to 348       334/348
(95 %)
6 diff
(98.3 %id)
R13858 whole brain .a 817 to 1224 12 to 421     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 410/421
(97 %)
11 diff
(97.4 %id)
H05358 whole brain .a 817 to 1178 12 to 379     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 366/427
(85 %)
11 diff
(97.5 %id)
T94956 lung .a 894 to 1242 1 to 361       359/379
(94 %)
10 diff
(97.4 %id)
AL526877 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1131 to 2184 1050 to 1       1050/1050
(100 %)
6 diff
(99.5 %id)
T95010 lung .a 1792 to 2204 411 to 1       411/416
(98 %)
8 diff
(98.1 %id)
H05308 whole brain .a 1850 to 2216 391 to 18   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 374/455
(82 %)
8 diff
(98.3 %id)
H12042 whole brain .a 1853 to 2216 381 to 18   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 364/478
(76 %)
2 diff
(99.6 %id)
R37000 whole brain .a 1874 to 2216 360 to 17   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 344/347
(99 %)
3 diff
(99.2 %id)
AA453607   .a 1877 to 2194 318 to 1       318/318
(100 %)
0 diff
(100 %id)
F05000 brain, total brain .a 1910 to 2216 307 to 1       307/307
(100 %)
0 diff
(100 %id)
F03322 brain, total brain .a 1952 to 2216 265 to 1       265/265
(100 %)
1 diff
(99.7 %id)
F01968 brain, total brain .a 1970 to 2216 247 to 1       247/247
(100 %)
0 diff
(100 %id)
F01965 brain, total brain .a 1989 to 2211 213 to 5       209/216
(96 %)
7 diff
(96.8 %id)
AK297632 brain .b 1 to 2129 1 to 2129 N121D tiling clone,   2129/2129
(100 %)
3 diff
(99.9 %id)
DC353893 brain .b 1 to 610 1 to 610       610/610
(100 %)
2 diff
(99.7 %id)
NM_001172420.1   .b 1 to 5492 1 to 5492 exact RefSeq, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 5492/5492
(100 %)
0 diff
(100 %id)
CX869126 embryonic stem .c 1 to 874 1 to 874   tiling clone, Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 874/874
(100 %)
0 diff
(100 %id)
CA423283 cell lines, Chondrosarcoma .c 1315 to 2049 750 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 734/734
(100 %)
2 diff
(99.8 %id)
CX869045 embryonic stem .c 1382 to 2047 693 to 27   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 667/669
(99 %)
0 diff
(100 %id)
AW974574   .c 1558 to 2047 491 to 2     Submitted on the opposite strand 490/736
(66 %)
0 diff
(100 %id)
AA651907 germinal center B cell .c 1587 to 2049 478 to 16   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 463/463
(100 %)
1 diff
(99.8 %id)
AA918581 pooled .c 1743 to 2050 311 to 4   tiling clone,   308/311
(99 %)
0 diff
(100 %id)
AK295064 brain .d 1 to 2015 6 to 2020 Q140R tiling clone,   2020/2020
(100 %)
2 diff
(100.0 %id)
DC324206 brain .d 1 to 582 6 to 587   tiling clone,   587/587
(100 %)
0 diff
(100 %id)
FN124028 breast carcinoma .d 237 to 307 70 to 1     Submitted on the opposite strand 70/82
(85 %)
3 diff
(96.4 %id)
CD359573 testis .d 245 to 1011 1 to 775       775/890
(87 %)
22 diff
(97.6 %id)
BI964764 Islets of Langerhans, Pancreas .d 250 to 550 1 to 301       301/301
(100 %)
3 diff
(99.1 %id)
FN159231 breast carcinoma .d 490 to 595 1 to 102       102/105
(97 %)
9 diff
(91.5 %id)
CD108826 brain, Pituitary .d 547 to 1381 1 to 845   tiling clone,   845/875
(96 %)
13 diff
(98.6 %id)
AW601999 breast .d 644 to 765 1 to 122       122/122
(100 %)
2 diff
(98.4 %id)
DA623793 Kidney .d 682 to 1223 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BX349191   .d 734 to 1591 47 to 899       853/899
(94 %)
13 diff
(98.6 %id)
CB156084 Liver .d 767 to 1474 1 to 708       708/708
(100 %)
0 diff
(100 %id)
CB160191 Liver .d 767 to 1337 1 to 571       571/571
(100 %)
0 diff
(100 %id)
CB215558 normal endometrium, late proliferativephase, cycle day 13, uterus .d 788 to 1429 1 to 642       642/642
(100 %)
0 diff
(100 %id)
BQ879684 dorsal root ganglia .d 833 to 1718 1 to 900       900/941
(95 %)
22 diff
(97.7 %id)
FN112521 breast carcinoma .d 906 to 999 1 to 92       92/92
(100 %)
4 diff
(95.7 %id)
CD104741 Pooled-Skin .d 906 to 1572 1 to 676       676/755
(89 %)
17 diff
(97.8 %id)
BF342951 brain, glioblastoma with EGFR amplification .d 1036 to 1806 1 to 790       788/804
(98 %)
41 diff
(95.0 %id)
BF507572   .d 1065 to 1305 272 to 32       241/288
(83 %)
3 diff
(99.0 %id)
FN119592 breast carcinoma .d 1231 to 1309 80 to 1     Submitted on the opposite strand 80/86
(93 %)
1 diff
(98.9 %id)
FN147339 breast carcinoma .d 1357 to 1451 1 to 94       94/103
(91 %)
4 diff
(96.2 %id)
FN070409 breast carcinoma .d 1359 to 1444 1 to 86       86/93
(92 %)
3 diff
(96.8 %id)
FN078197 breast carcinoma .d 1529 to 1620 95 to 1     Submitted on the opposite strand 95/99
(95 %)
3 diff
(97.0 %id)
AA330970 embryo .d 1540 to 1791 1 to 252       252/252
(100 %)
0 diff
(100 %id)
AY608690   .e 1 to 2177 1 to 2176   tiling clone, AAA   2176/2176
(100 %)
3 diff
(99.9 %id)
NR_033327.1   .e 455 to 7291 1 to 6837 exact RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 6837/6837
(100 %)
0 diff
(100 %id)
DA906669   .e 456 to 1039 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA749937   .e 472 to 1004 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
BM153077 leukopheresis .e 498 to 965 1 to 468       468/468
(100 %)
1 diff
(99.8 %id)
DB502674 hypothalamus .e 500 to 977 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
AU253617 neuroblastoma .e 513 to 1192 1 to 678       678/684
(99 %)
14 diff
(98.0 %id)
DB016295 esophageal, tumor tissue .e 514 to 1058 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB067111 testis .e 514 to 1042 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
BP195938 brain .e 515 to 1096 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB469558 hippocampus .e 515 to 952 1 to 438       438/438
(100 %)
0 diff
(100 %id)
CF995044 Human Placenta, placenta .e 515 to 1374 30 to 890       861/892
(96 %)
16 diff
(98.3 %id)
CF994792 Human Placenta, placenta .e 515 to 1206 30 to 721       692/723
(95 %)
8 diff
(98.9 %id)
BP375730 uterus .e 515 to 1094 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA012235 adrenal gland .e 516 to 1087 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BP378522 uterus .e 520 to 1085 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DB276652 uterus .e 527 to 981 2 to 456   capped   455/455
(100 %)
0 diff
(100 %id)
BU151050 dorsal root ganglia .e 540 to 1393 9 to 862       854/971
(87 %)
12 diff
(98.8 %id)
DB503503 hypothalamus .e 548 to 1017 1 to 470       470/470
(100 %)
0 diff
(100 %id)
BM148121 leukopheresis .e 548 to 1065 1 to 518       518/518
(100 %)
4 diff
(99.3 %id)
DB472454 hippocampus .e 559 to 1046 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
AK225543 Kidney .e 561 to 3928 1 to 3366 exact AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 3366/3366
(100 %)
2 diff
(100.0 %id)
BJ996505 hepatoblastoma .e 561 to 1015 1 to 455       455/455
(100 %)
0 diff
(100 %id)
BP274826 Kidney .e 561 to 1142 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP283922 bone marrow .e 561 to 1141 1 to 580       580/582
(99 %)
3 diff
(99.5 %id)
AU280496   .e 561 to 1125 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DA162261 amygdala .e 562 to 1103 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA171195 amygdala .e 562 to 1132 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA233309 brain .e 562 to 1149 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA348362 substantia nigra .e 562 to 1119 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB043049 testis .e 562 to 1121 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB063724 testis .e 562 to 1103 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DA058720 cerebellum .e 563 to 1083 2 to 523   capped   522/522
(100 %)
2 diff
(99.7 %id)
AL122084 testis .e 567 to 4005 1 to 3437 I365L available from DKFZ, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 3437/3437
(100 %)
5 diff
(99.9 %id)
BP227259   .e 567 to 1146 1 to 579       579/581
(99 %)
2 diff
(99.7 %id)
BP229377 brain .e 567 to 1146 1 to 580       580/583
(99 %)
2 diff
(99.7 %id)
CB112095 Liver .e 567 to 1200 1 to 634       634/634
(100 %)
0 diff
(100 %id)
DA622095 Kidney .e 568 to 1105 9 to 546   capped   538/538
(100 %)
0 diff
(100 %id)
DA775035 brain .e 568 to 1137 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB480244 hippocampus .e 570 to 858 1 to 289       289/292
(98 %)
1 diff
(99.7 %id)
DB040232 testis .e 573 to 1161 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA169406 amygdala .e 574 to 1146 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA232035 brain .e 574 to 1137 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA414006 thalamus .e 574 to 1140 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA479038   .e 574 to 1132 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA694413   .e 574 to 1141 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA886295   .e 574 to 1141 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA911524   .e 574 to 1122 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA978025 synovial membrane tissue from rheumatioidarthritis .e 574 to 1134 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB032852 testis .e 574 to 1163 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DB291742 uterus .e 574 to 1078 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
CN340796 embryonic stem cells, DMSO-treated H9 cellline .e 578 to 1365 1 to 788       788/788
(100 %)
0 diff
(100 %id)
DB059095 testis .e 598 to 1083 2 to 487   capped   486/486
(100 %)
1 diff
(99.8 %id)
BI562007 testis .e 600 to 1393 1 to 798       798/801
(99 %)
35 diff
(95.7 %id)
DA381811 thalamus .e 602 to 1155 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA579332   .e 602 to 1123 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
DA838754 placenta .e 602 to 1145 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA907597   .e 602 to 1156 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DB043474 testis .e 602 to 1163 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB050825 testis .e 602 to 1142 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB193022 ovary, tumor tissue .e 602 to 1050 2 to 450   capped   449/449
(100 %)
0 diff
(100 %id)
DB197695 trachea .e 602 to 1185 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB210082 trachea .e 602 to 1083 2 to 483   capped   482/482
(100 %)
0 diff
(100 %id)
CD692322 normal nasopharynx .e 604 to 1190 12 to 598       587/598
(98 %)
6 diff
(99.0 %id)
CN420065 embryonic stem cells, cell lines H1, H7, andH9 .e 605 to 1213 1 to 609       609/609
(100 %)
0 diff
(100 %id)
DB051689 testis .e 605 to 1168 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB452518 testis .e 606 to 1078 1 to 473       473/473
(100 %)
0 diff
(100 %id)
TI_44349916   .e 607 to 1393 127 to 917       791/920
(85 %)
36 diff
(96.1 %id)
DB040057 testis .e 609 to 1185 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
DB206561 trachea .e 609 to 1191 2 to 584   capped   583/584
(99 %)
1 diff
(99.9 %id)
DB455025 testis .e 611 to 1101 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
DB483202 hippocampus .e 611 to 1100 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
AW503355 lymph .e 611 to 1085 8 to 482       475/482
(98 %)
0 diff
(100 %id)
TI_154159191   .e 611 to 1279 89 to 755       667/673
(99 %)
13 diff
(98.1 %id)
CN340795 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 620 to 1320 1 to 701       701/701
(100 %)
0 diff
(100 %id)
CN420064 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 620 to 787 1 to 168       168/168
(100 %)
0 diff
(100 %id)
DB026591 testis .e 620 to 1184 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB048140 testis .e 620 to 1177 2 to 562   capped   561/561
(100 %)
5 diff
(99.2 %id)
DB207710 trachea .e 620 to 1176 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB451619 testis .e 623 to 1125 1 to 503       503/503
(100 %)
2 diff
(99.7 %id)
DB453472 testis .e 623 to 1130 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
DB498420 hypothalamus .e 623 to 1140 1 to 518       518/518
(100 %)
1 diff
(99.9 %id)
BJ990310 hepatoblastoma .e 623 to 1202 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DB037338 testis .e 625 to 1201 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DB046823 testis .e 626 to 1176 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DB059667 testis .e 626 to 1162 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DB210723 trachea .e 626 to 1012 2 to 388   capped   387/387
(100 %)
2 diff
(99.5 %id)
DB048527 testis .e 627 to 1183 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
CD699384 normal nasopharynx .e 628 to 1245 19 to 636       618/636
(97 %)
8 diff
(98.8 %id)
DA745343   .e 628 to 1201 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
BI560633 testis .e 629 to 1346 1 to 717       717/717
(100 %)
7 diff
(99.1 %id)
CN340794 embryonic stem cells, DMSO-treated H9 cellline .e 631 to 995 1 to 365       365/365
(100 %)
1 diff
(99.8 %id)
DB461409 testis .e 632 to 1114 1 to 483       483/483
(100 %)
0 diff
(100 %id)
BG250399 adenocarcinoma, cell line, Liver .e 632 to 1334 1 to 706   available from MGC,   706/723
(97 %)
12 diff
(98.4 %id)
DB040963 testis .e 633 to 1137 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
BP292164 lung .e 634 to 1218 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DB050881 testis .e 634 to 1181 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA142954 alzheimer cortex .e 643 to 1211 2 to 570   capped   569/571
(99 %)
1 diff
(99.9 %id)
TI_1948139564   .e 666 to 1331 128 to 793       666/1369
(48 %)
29 diff
(97.9 %id)
TI_1948139808   .e 666 to 1377 125 to 853       729/1462
(49 %)
36 diff
(97.6 %id)
CV029168 mixed .e 670 to 1296 1 to 627       627/627
(100 %)
0 diff
(100 %id)
BQ437086 melanotic melanoma, skin .e 675 to 1393 12 to 734       723/796
(90 %)
10 diff
(98.8 %id)
AA954420 pooled .e 769 to 1203 436 to 1       436/436
(100 %)
4 diff
(99.1 %id)
AW102746 pooled .e 836 to 1206 371 to 1       371/371
(100 %)
0 diff
(100 %id)
AI222017 pooled .e 905 to 1206 302 to 1       302/302
(100 %)
2 diff
(99.4 %id)
FN113270 breast carcinoma .e 1342 to 1442 101 to 1     Submitted on the opposite strand 101/104
(97 %)
0 diff
(100 %id)
AW373109 breast .e 1373 to 2015 639 to 1       639/639
(100 %)
7 diff
(99.0 %id)
AW384626 head_neck .e 1373 to 2015 639 to 1       639/639
(100 %)
7 diff
(99.0 %id)
AW749503 breast .e 1395 to 2014 622 to 1       622/623
(99 %)
15 diff
(97.6 %id)
BF350901 head_neck .e 1395 to 2014 622 to 1       622/623
(99 %)
15 diff
(97.6 %id)
AU253618 neuroblastoma .e 1481 to 2180 698 to 3       696/699
(99 %)
0 diff
(100 %id)
CA314401 Human Lung Epithelial cells, lung .e 1493 to 2177 704 to 19   AAA   686/686
(100 %)
1 diff
(99.9 %id)
CA312725 Human Lung Epithelial cells, lung .e 1518 to 2177 678 to 19   AAA   660/660
(100 %)
0 diff
(100 %id)
BU609136 Human Lung Epithelial cells, lung .e 1603 to 2176 592 to 19   AAA   574/583
(98 %)
0 diff
(100 %id)
AI564473 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1655 to 2179 525 to 1       525/525
(100 %)
3 diff
(99.5 %id)
AA844734   .e 1683 to 2180 498 to 1       498/498
(100 %)
1 diff
(99.8 %id)
TI_151763947   .e 1684 to 2284 687 to 87   AAA   601/941
(63 %)
3 diff
(99.7 %id)
BQ185804 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 1690 to 2284 1 to 595   fully sequenced, AAA   595/595
(100 %)
0 diff
(100 %id)
AW664003 pooled .e 1699 to 2180 482 to 1       482/482
(100 %)
1 diff
(99.8 %id)
AI609176 normal gingiva (cell line from immortalizedkeratinocytes) .e 1700 to 2177 478 to 1       478/478
(100 %)
0 diff
(100 %id)
DB574743 hypothalamus .e 1704 to 2177 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
AI613236 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e 1715 to 2177 463 to 1       463/463
(100 %)
1 diff
(99.8 %id)
AA757033   .e 1720 to 2180 459 to 1       459/459
(100 %)
2 diff
(99.6 %id)
DB573905 hypothalamus .e 1725 to 2177 1 to 453     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
DB548987 hippocampus .e 1729 to 2177 1 to 449     Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
AW168922 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e 1736 to 2179 446 to 1       446/446
(100 %)
4 diff
(99.2 %id)
DB537153 hippocampus .e 1743 to 2177 1 to 435     Submitted on the opposite strand 435/435
(100 %)
1 diff
(99.8 %id)
AA774082   .e 1745 to 2177 433 to 1       433/433
(100 %)
0 diff
(100 %id)
BJ996506 hepatoblastoma .e 1747 to 2177 452 to 22   AAA   431/431
(100 %)
0 diff
(100 %id)
AI081858   .e 1748 to 2178 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AI963736 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 1748 to 2181 434 to 1       434/434
(100 %)
0 diff
(100 %id)
BM151110 leukopheresis .e 1788 to 2177 407 to 17   AAA   391/391
(100 %)
1 diff
(99.8 %id)
FN061790 breast carcinoma .e 1796 to 1906 111 to 1     Submitted on the opposite strand 111/111
(100 %)
0 diff
(100 %id)
FN109763 breast carcinoma .e 1800 to 1908 104 to 1     Submitted on the opposite strand 104/104
(100 %)
7 diff
(93.3 %id)
AI610094 brain, tumor, 5 pooled (see description) .e 1843 to 2179 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
BM150648 leukopheresis .e 1844 to 2176 350 to 18   AAA   333/333
(100 %)
3 diff
(99.1 %id)
FN149455 breast carcinoma .e 1876 to 1980 105 to 1     Submitted on the opposite strand 105/105
(100 %)
0 diff
(100 %id)
FN087280 breast carcinoma .e 1896 to 1953 60 to 1     Submitted on the opposite strand 60/61
(98 %)
2 diff
(96.8 %id)
FN111677 breast carcinoma .e 1914 to 1987 74 to 1     Submitted on the opposite strand 74/75
(98 %)
0 diff
(100 %id)
BM145952 leukopheresis .e 1952 to 2194 244 to 1       244/244
(100 %)
3 diff
(98.8 %id)
CN478555 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 1972 to 2284 329 to 17   fully sequenced, AAA   313/313
(100 %)
0 diff
(100 %id)
BE048965 Kidney .e 1980 to 2177 198 to 1       198/198
(100 %)
0 diff
(100 %id)
DA145874 amygdala .e 2064 to 2634 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
AA897435 pooled .e 2074 to 2177 104 to 1       104/104
(100 %)
1 diff
(99.1 %id)
BQ775293 Bone, Human Chondrosarcoma Cell Line .e 2204 to 2971 32 to 790     Submitted on the opposite strand 759/779
(97 %)
18 diff
(97.7 %id)
BM836789 Ascites, stomach .e 2272 to 2803 1 to 532       532/532
(100 %)
0 diff
(100 %id)
CB140358 Liver .e 2417 to 2903 1 to 487       487/487
(100 %)
3 diff
(99.4 %id)
AA287162 germinal center B cell .e 2616 to 3042 1 to 427       427/427
(100 %)
0 diff
(100 %id)
AL582122 B cells from Burkitt lymphoma .e 2884 to 3894 1010 to 1       1010/1010
(100 %)
1 diff
(100.0 %id)
TI_1948139566   .e 2941 to 3855 1034 to 117       918/1276
(71 %)
22 diff
(98.3 %id)
AA053290 uterus .e 2978 to 3168 1 to 191     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 191/191
(100 %)
0 diff
(100 %id)
TI_1948140320   .e 3062 to 3855 911 to 117       795/1304
(60 %)
12 diff
(99.1 %id)
TI_1948139810   .e 3110 to 3855 866 to 116       751/1346
(55 %)
11 diff
(99.2 %id)
CX866707 embryonic stem .e 3124 to 3934 1 to 810       810/810
(100 %)
4 diff
(99.6 %id)
CA502942 Human Lung Epithelial cells, lung .e 3172 to 3928 772 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 754/754
(100 %)
5 diff
(99.4 %id)
CA310647 Human Lung Epithelial cells, lung .e 3188 to 3928 758 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 740/740
(100 %)
5 diff
(99.4 %id)
BQ574334 Chondrosarcoma Grade II, Left Pelvis .e 3197 to 3922 743 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 725/761
(95 %)
6 diff
(99.3 %id)
TI_149306758   .e 3200 to 3928 822 to 95   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 728/909
(80 %)
8 diff
(99.2 %id)
TI_159696372   .e 3200 to 4012 848 to 42   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 807/1004
(80 %)
11 diff
(99.0 %id)
BM978821 lung, Primary Lung Epithelial Cells .e 3200 to 3928 746 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 728/758
(96 %)
8 diff
(99.0 %id)
CA430168 Cell Line, Chondrosarcoma .e 3206 to 3928 740 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 722/722
(100 %)
2 diff
(99.8 %id)
TI_149306843   .e 3228 to 3928 786 to 87   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 700/930
(75 %)
1 diff
(99.9 %id)
BU686653 lung, Primary Lung Epithelial Cells .e 3228 to 3928 718 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 700/704
(99 %)
1 diff
(99.9 %id)
AW976379   .e 3282 to 3927 643 to 1     Submitted on the opposite strand 643/643
(100 %)
9 diff
(98.7 %id)
TI_149298466   .e 3284 to 4016 821 to 91   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 731/792
(92 %)
41 diff
(94.9 %id)
BU621115 cell lines, Chondrosarcoma .e 3348 to 4012 683 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 665/665
(100 %)
2 diff
(99.7 %id)
BU632172 cell lines, Chondrosarcoma .e 3396 to 4012 632 to 16   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 617/617
(100 %)
2 diff
(99.7 %id)
DB540238 hippocampus .e 3415 to 3928 1 to 514     Submitted on the opposite strand 514/514
(100 %)
0 diff
(100 %id)
BJ990311 hepatoblastoma .e 3429 to 3908 480 to 1       480/480
(100 %)
0 diff
(100 %id)
BX098176 uterus .e 3433 to 4147 1 to 715       715/715
(100 %)
1 diff
(99.9 %id)
DB569509 hypothalamus .e 3459 to 3928 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
AI460219 brain, meningioma .e 3466 to 3910 445 to 1       445/445
(100 %)
0 diff
(100 %id)
DB541212 hippocampus .e 3468 to 3928 1 to 461     Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
DB520430 testis .e 3471 to 3928 1 to 458     Submitted on the opposite strand 458/458
(100 %)
1 diff
(99.8 %id)
AA582539 Kidney, kidney tumor .e 3471 to 3928 485 to 28   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 458/458
(100 %)
0 diff
(100 %id)
DB526814 testis .e 3474 to 3928 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
AI761614 pooled .e 3491 to 4012 521 to 1       521/521
(100 %)
3 diff
(99.5 %id)
AA286856 germinal center B cell .e 3492 to 3929 440 to 3       438/440
(99 %)
0 diff
(100 %id)
AI149781   .e 3493 to 3929 437 to 3       435/437
(99 %)
1 diff
(99.8 %id)
AI032670 liver and spleen .e 3495 to 3920 426 to 1       426/426
(100 %)
0 diff
(100 %id)
DB515302 testis .e 3500 to 3928 1 to 429     Submitted on the opposite strand 429/429
(100 %)
0 diff
(100 %id)
DB517959 testis .e 3504 to 3928 1 to 425     Submitted on the opposite strand 425/425
(100 %)
2 diff
(99.6 %id)
AI819154 lymph node, lymphoma, follicular mixed small and largecell .e 3513 to 3927 429 to 14   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 416/416
(100 %)
4 diff
(99.1 %id)
BM983198 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 3552 to 4016 483 to 19   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 465/465
(100 %)
3 diff
(99.4 %id)
DB552101 hippocampus .e 3567 to 4012 1 to 446   AAA Submitted on the opposite strand 446/446
(100 %)
1 diff
(99.8 %id)
AI001803   .e 3583 to 3929 350 to 4       347/350
(99 %)
0 diff
(100 %id)
AA904906 pooled .e 3584 to 3929 349 to 4       346/349
(99 %)
0 diff
(100 %id)
AA743196 germinal center B cell .e 3589 to 3928 354 to 15   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 340/340
(100 %)
3 diff
(99.2 %id)
AY608689   .e 3595 to 7284 1 to 3712       3712/3712
(100 %)
20 diff
(99.5 %id)
AI033193 liver and spleen .e 3627 to 3920 294 to 1       294/294
(100 %)
0 diff
(100 %id)
CR736689   .e 3670 to 4155 1 to 486       486/486
(100 %)
1 diff
(99.8 %id)
CN275684 embryonic stem cells, DMSO-treated H9 cellline .e 3789 to 3928 1 to 140   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 140/140
(100 %)
0 diff
(100 %id)
AI288171 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 3804 to 4148 362 to 18   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 345/345
(100 %)
1 diff
(99.8 %id)
AA054759 uterus .e 3841 to 3928 101 to 14   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 88/88
(100 %)
0 diff
(100 %id)
BF846134 lung_normal .e 3988 to 4188 225 to 24     Submitted on the opposite strand 202/225
(89 %)
0 diff
(100 %id)
AI472885 pooled .e 4122 to 4480 1 to 358     Submitted on the opposite strand 358/358
(100 %)
1 diff
(99.8 %id)
AI817143 pooled .e 4123 to 4597 1 to 474     Submitted on the opposite strand 474/474
(100 %)
3 diff
(99.4 %id)
AW962632   .e 4595 to 5162 564 to 1     Submitted on the opposite strand 564/566
(99 %)
13 diff
(97.8 %id)
AW511790 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e 4742 to 5165 422 to 1       422/422
(100 %)
3 diff
(99.3 %id)
BQ270346 insulinoma, Pancreas .e 4783 to 5347 19 to 589     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 571/589
(96 %)
10 diff
(98.4 %id)
BU782096 insulinoma, Pancreas .e 4783 to 5342 19 to 584     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 566/584
(96 %)
8 diff
(98.7 %id)
BU783590 insulinoma, Pancreas .e 4783 to 5347 19 to 589     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 571/589
(96 %)
10 diff
(98.4 %id)
AK094609 amygdala .e 4882 to 7288 1 to 2409   available from FLJ,   2409/2409
(100 %)
29 diff
(98.8 %id)
DA389746 thalamus .e 4892 to 5467 2 to 577   capped   576/577
(99 %)
5 diff
(99.2 %id)
DB058625 testis .e 5179 to 5708 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
BE467289 carcinoid, lung .e 5215 to 5659 447 to 1       447/447
(100 %)
2 diff
(99.6 %id)
BE673845 carcinoid, lung .e 5216 to 5659 446 to 1       446/446
(100 %)
3 diff
(99.4 %id)
BE674237 carcinoid, lung .e 5216 to 5659 446 to 1       446/446
(100 %)
3 diff
(99.4 %id)
AW450765   .e 5249 to 5656 427 to 18   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 410/410
(100 %)
1 diff
(99.8 %id)
AW576376 lymph .e 5249 to 5661 435 to 23   AAA   413/418
(98 %)
0 diff
(100 %id)
DA698657   .e 5514 to 5968 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
CX866624 embryonic stem .e 6711 to 7278 599 to 32   AAA   568/574
(98 %)
0 diff
(100 %id)
BU782981 insulinoma, Pancreas .e 6738 to 7291 570 to 17   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 554/554
(100 %)
8 diff
(98.6 %id)
BQ268404 insulinoma, Pancreas .e 6774 to 7291 534 to 17   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 518/518
(100 %)
8 diff
(98.5 %id)
BU782597 insulinoma, Pancreas .e 6825 to 7291 483 to 17   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 467/467
(100 %)
8 diff
(98.3 %id)
AY424286   .f 1 to 4642 1 to 4642 exact tiling clone, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 4642/4642
(100 %)
5 diff
(99.9 %id)
T34387 lung .f 3167 to 3434 1 to 270       270/271
(99 %)
8 diff
(97.1 %id)
AW957589   .f 3168 to 3739 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
AW965849   .f 3168 to 3675 1 to 507       507/507
(100 %)
7 diff
(98.7 %id)
T33606 brain .f 3173 to 3593 1 to 421       421/421
(100 %)
3 diff
(99.3 %id)
CN395844 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 3251 to 3894 1 to 644       644/644
(100 %)
2 diff
(99.7 %id)
BQ226356 melanotic melanoma, skin .f 3308 to 4154 1 to 850   tiling clone,   850/850
(100 %)
15 diff
(98.3 %id)
H75537 liver and spleen .f 3542 to 3854 1 to 319       319/346
(92 %)
11 diff
(96.9 %id)
CD672456 eye, Iris .f 3635 to 4136 16 to 517     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 502/517
(97 %)
6 diff
(98.9 %id)
AJ420470   .f 3762 to 4739 10 to 980   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 971/980
(99 %)
6 diff
(99.4 %id)
DT220965 brain .f 3809 to 4499 1 to 691       691/691
(100 %)
2 diff
(99.8 %id)
AW901169 nervous_normal .f 3869 to 4252 16 to 398       383/398
(96 %)
6 diff
(98.5 %id)
BQ716686 sympathetic trunk .f 3875 to 4642 1 to 768       768/769
(99 %)
5 diff
(99.4 %id)
AA834877 ovary .f 3913 to 4373 1 to 461       461/461
(100 %)
3 diff
(99.4 %id)
AI557294 Prostate .f 3914 to 4478 13 to 584     Submitted on the opposite strand 572/913
(62 %)
22 diff
(97.6 %id)
BP204839 coronary artery .f 3944 to 4527 1 to 584   tiling clone,   584/586
(99 %)
3 diff
(99.5 %id)
AI655524 pooled germ cell tumors .f 4078 to 4649 572 to 1       572/572
(100 %)
2 diff
(99.7 %id)
BF899104 marrow .f 4081 to 4476 402 to 4     Submitted on the opposite strand 399/402
(99 %)
0 diff
(100 %id)
BF740151 brain, glioblastoma (pooled) .f 4101 to 4640 547 to 7       541/547
(98 %)
0 diff
(100 %id)
AA991482 pooled germ cell tumors .f 4108 to 4659 551 to 1       551/551
(100 %)
1 diff
(99.9 %id)
AL596497 amygdala .f 4111 to 4661 555 to 1       555/555
(100 %)
3 diff
(99.5 %id)
TI_149281657   .f 4154 to 4724 602 to 32       571/843
(67 %)
0 diff
(100 %id)
AI655504 pooled germ cell tumors .f 4175 to 4647 473 to 1       473/473
(100 %)
3 diff
(99.4 %id)
CB854274 lung, Primary Lung Epithelial Cells .f 4185 to 4724 552 to 13       540/552
(97 %)
0 diff
(100 %id)
DB520116 testis .f 4203 to 4640 1 to 438     Submitted on the opposite strand 438/444
(98 %)
2 diff
(99.6 %id)
DB547400 hippocampus .f 4205 to 4640 1 to 436     Submitted on the opposite strand 436/442
(98 %)
3 diff
(99.4 %id)
AW852249 colon .f 4212 to 4577 10 to 375       366/375
(97 %)
6 diff
(98.4 %id)
DB538419 hippocampus .f 4213 to 4640 1 to 425     Submitted on the opposite strand 425/431
(98 %)
13 diff
(97.0 %id)
DB535404 hippocampus .f 4216 to 4640 1 to 424     Submitted on the opposite strand 424/430
(98 %)
13 diff
(97.0 %id)
AI424536 brain, glioblastoma (pooled) .f 4235 to 4640 412 to 7       406/412
(98 %)
0 diff
(100 %id)
T33605 brain .f 4243 to 4640 404 to 7       398/404
(98 %)
0 diff
(100 %id)
BM768482 stomach .f 4256 to 4640 1 to 385   AAA   385/392
(98 %)
3 diff
(99.3 %id)
BP397626 pancreatic islet .f 4285 to 4627 1 to 343     Submitted on the opposite strand 343/343
(100 %)
2 diff
(99.5 %id)
CD672455 eye, Iris .f 4288 to 4740 476 to 23   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 454/454
(100 %)
4 diff
(99.2 %id)
AA548663 normal prostate, Prostate .f 4289 to 4646 360 to 4       357/360
(99 %)
0 diff
(100 %id)
BE858958 Prostate .f 4308 to 4648 341 to 1       341/341
(100 %)
2 diff
(99.5 %id)
BF922762 nervous_tumor .f 4311 to 4473 171 to 7     Submitted on the opposite strand 165/171
(96 %)
0 diff
(100 %id)
AI702498 Kidney .f 4319 to 4737 417 to 1       417/417
(100 %)
2 diff
(99.6 %id)
DB555135 hypothalamus .f 4321 to 4738 1 to 416     Submitted on the opposite strand 416/418
(99 %)
15 diff
(96.5 %id)
AI656485 pooled germ cell tumors .f 4332 to 4737 403 to 4       400/403
(99 %)
0 diff
(100 %id)
FN058948 breast carcinoma .f 4343 to 4450 1 to 108       108/109
(99 %)
2 diff
(98.2 %id)
H69032 liver and spleen .f 4346 to 4640 306 to 7       300/306
(98 %)
0 diff
(100 %id)
BI497435 cochlea, ear .f 4363 to 4640 1 to 278   AAA   278/284
(97 %)
6 diff
(97.9 %id)
T17070   .f 4371 to 4640 278 to 7       272/288
(94 %)
0 diff
(100 %id)
AA594598 colon, colon tumor RER+ .f 4379 to 4739 358 to 6       353/358
(98 %)
0 diff
(100 %id)
BX092516 whole brain .f 4382 to 4656 280 to 1     Submitted on the opposite strand 280/280
(100 %)
3 diff
(99.0 %id)
AI469155 follicular lymphoma, lymph node .f 4399 to 4640 285 to 44   AAA   242/248
(97 %)
0 diff
(100 %id)
BM795815 stomach .f 4448 to 4603 1 to 156       156/156
(100 %)
1 diff
(99.4 %id)
T34386 lung .f 4452 to 4640 195 to 7       189/195
(96 %)
0 diff
(100 %id)
GW493492 stomach .f 4485 to 4654 191 to 19   AAA Submitted on the opposite strand 173/174
(99 %)
0 diff
(100 %id)
AW497630   .f 4492 to 4631 140 to 1       140/140
(100 %)
2 diff
(98.6 %id)
T03667   .f 4510 to 4739 231 to 1       231/231
(100 %)
6 diff
(97.5 %id)
EB360964 eye, lens .f 4545 to 4642 121 to 25   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 97/97
(100 %)
2 diff
(98.0 %id)
BU607364 Human Lung Epithelial cells, lung .g 1 to 657 674 to 17 M14N L15A V16G N17E D18* tiling clone, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 658/658
(100 %)
5 diff
(99.3 %id)
CX869902 embryonic stem .h 1 to 676 1 to 676 exact tiling clone,   676/676
(100 %)
0 diff
(100 %id)
NM_133367.4   .i 1 to 4737 1 to 4737 exact RefSeq, AAA Possibly primed on the genome, locally A rich (32/34 A in genome downstream of last aligned base) 4737/4737
(100 %)
0 diff
(100 %id)
TI_44166524   .i 17 to 865 80 to 925 L6P     846/927
(91 %)
18 diff
(98.1 %id)
AF347029   .i 20 to 4637 10 to 4627 exact tiling clone, AAA   4618/4624
(99 %)
7 diff
(99.9 %id)
BI546339 brain, hippocampus .i 21 to 865 1 to 842 L6P     842/844
(99 %)
17 diff
(98.0 %id)
AK315088 placenta .i 24 to 1239 1 to 1217 R32P C33L H34P D35*     1217/1217
(100 %)
2 diff
(99.9 %id)
DA860025 placenta .i 25 to 589 2 to 567 R32P C33L H34P D35* capped   566/566
(100 %)
1 diff
(99.9 %id)
DB036004 testis .i 25 to 591 2 to 569 L6P R32P C33R H34P D35* capped   568/568
(100 %)
3 diff
(99.5 %id)
DB175046 kidney, tumor tissue .i 25 to 566 2 to 543 exact capped   542/542
(100 %)
0 diff
(100 %id)
BC030664 Brain, hippocampus .i 26 to 3109 1 to 3084 L6P available from MGC, AAA   3084/3084
(100 %)
6 diff
(99.9 %id)
CD558648 White Matter .i 26 to 745 1 to 729 exact     729/973
(74 %)
10 diff
(99.0 %id)
DA344136 substantia nigra .i 27 to 608 2 to 584 R32P C33L H34P D35* capped   583/583
(100 %)
1 diff
(99.9 %id)
DA288589 corpus callosum .i 31 to 596 2 to 567 exact capped   566/567
(99 %)
2 diff
(99.7 %id)
DA289668 hippocampus .i 31 to 551 2 to 523 L6P P42A E43* capped   522/522
(100 %)
2 diff
(99.7 %id)
DA391908 thalamus .i 31 to 608 2 to 578 Q111N R112V L113W D114T P115H ... capped   577/577
(100 %)
1 diff
(99.9 %id)
BM548428 brain, hippocampus .i 33 to 800 13 to 793 exact     781/1141
(68 %)
22 diff
(98.1 %id)
BI916803 brain .i 36 to 807 28 to 817 G2L R3G A4L L6W R7A ...     790/817
(96 %)
21 diff
(97.5 %id)
TI_57239592   .i 36 to 807 66 to 855 G2L R3G A4L L6W R7A ...     790/855
(92 %)
22 diff
(97.5 %id)
DA413253 thalamus .i 40 to 558 2 to 520 exact capped   519/519
(100 %)
1 diff
(99.9 %id)
DA534343 brain .i 40 to 624 2 to 586 L6P Y19S C33G capped   585/585
(100 %)
4 diff
(99.4 %id)
CR746524 pooled lung and spleen .i 41 to 565 1 to 525 L6P C33G     525/525
(100 %)
2 diff
(99.7 %id)
BM926460 pooled lung and spleen .i 42 to 1055 1 to 1019 L6P C33G     1019/1107
(92 %)
22 diff
(98.1 %id)
DB506073 hypothalamus .i 45 to 547 1 to 503 exact     503/503
(100 %)
2 diff
(99.7 %id)
DA328655 hippocampus .i 54 to 610 2 to 559 exact capped   558/558
(100 %)
1 diff
(99.9 %id)
DA205326 brain .i 55 to 638 2 to 585 Y19S C33G capped   584/584
(100 %)
2 diff
(99.7 %id)
DA327766 hippocampus .i 55 to 589 2 to 536 exact capped   535/535
(100 %)
0 diff
(100 %id)
DA286501 corpus callosum .i 66 to 589 2 to 525 exact capped   524/524
(100 %)
0 diff
(100 %id)
DA308077 hippocampus .i 67 to 634 2 to 569 R9W R112C capped   568/568
(100 %)
2 diff
(99.7 %id)
DA280697 corpus callosum .i 68 to 631 2 to 565 exact capped   564/564
(100 %)
1 diff
(99.9 %id)
DB478733 hippocampus .i 86 to 592 1 to 508       508/508
(100 %)
7 diff
(98.7 %id)
DN989507 brain, whole brain .i 135 to 772 1 to 638       638/638
(100 %)
4 diff
(99.4 %id)
TI_1948123204   .i 166 to 861 117 to 819   fully sequenced,   703/819
(85 %)
18 diff
(97.9 %id)
CV024506 mixed .i 175 to 882 1 to 703       703/704
(99 %)
9 diff
(98.8 %id)
TI_1948123059   .i 234 to 1238 1143 to 125       1019/1356
(75 %)
0 diff
(100 %id)
DA313056 hippocampus .i 276 to 812 2 to 540   capped   539/539
(100 %)
2 diff
(99.7 %id)
DB042252 testis .i 306 to 879 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB027655 testis .i 326 to 893 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BG720179 testis .i 333 to 1090 1 to 758       758/760
(99 %)
4 diff
(99.5 %id)
BI465253 testis .i 333 to 1094 3 to 776       774/909
(85 %)
6 diff
(99.4 %id)
DB460851 testis .i 341 to 680 1 to 340       340/340
(100 %)
2 diff
(99.5 %id)
DB454704 testis .i 346 to 817 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
DB259720 uterus .i 367 to 923 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA709277   .i 371 to 930 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA491255 brain .i 372 to 923 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
AK093603 thymus .i 385 to 3109 1 to 2725   tiling clone, available from FLJ,   2725/2725
(100 %)
4 diff
(99.9 %id)
DB103629 thymus .i 386 to 942 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
CD636176   .i 390 to 1081 1 to 694       694/694
(100 %)
6 diff
(99.2 %id)
DA158197 amygdala .i 418 to 981 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA166380 amygdala .i 427 to 938 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
DA389514 thalamus .i 535 to 1057 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
AF313619 brain .i 569 to 2771 1 to 2203   AAA   2203/2203
(100 %)
3 diff
(99.9 %id)
AA101507 brain, neuroepithelial cells .i 569 to 986 1 to 419       419/419
(100 %)
5 diff
(98.9 %id)
DA586911 lung .i 587 to 1176 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA397731 thalamus .i 617 to 1213 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
DA327392 hippocampus .i 632 to 1095 2 to 465   capped   464/464
(100 %)
0 diff
(100 %id)
BP350002 brain .i 638 to 1220 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DA127080 cerebellum .i 660 to 1245 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA266394 caudate nucleus .i 667 to 1215 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA405879 thalamus .i 668 to 1160 2 to 494   capped   493/493
(100 %)
1 diff
(99.8 %id)
DA325300 hippocampus .i 745 to 1296 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA233098 brain .i 771 to 1349 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
TI_1948123205   .i 831 to 1242 532 to 122   fully sequenced,   411/532
(77 %)
5 diff
(99.1 %id)
DA212824 brain .i 837 to 1394 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
CN395845 embryonic stem cells, DMSO-treated H9 cellline .i 865 to 1096 1 to 232       232/232
(100 %)
1 diff
(99.6 %id)
BQ717453 sympathetic trunk .i 918 to 1602 1 to 696   AAA   696/696
(100 %)
26 diff
(96.3 %id)
CN395843 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i 921 to 1576 1 to 656       656/656
(100 %)
2 diff
(99.7 %id)
CD636177   .i 965 to 1733 781 to 14       768/781
(98 %)
0 diff
(100 %id)
DA218873 brain .i 971 to 1557 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA245664 brain .i 986 to 1569 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
D80400 brain .i 1034 to 1467 1 to 433       433/436
(99 %)
6 diff
(98.7 %id)
DA406605 thalamus .i 1036 to 1602 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BP298980   .i 1042 to 1596 1 to 555       555/555
(100 %)
0 diff
(100 %id)
D80080 brain .i 1063 to 1471 1 to 409       409/409
(100 %)
0 diff
(100 %id)
BU159120 eye, retinoblastoma .i 1210 to 2080 1 to 881       881/881
(100 %)
13 diff
(98.6 %id)
AW452643   .i 1227 to 1634 425 to 18   AAA   408/418
(97 %)
1 diff
(99.8 %id)
BF509071   .i 1227 to 1633 424 to 18   AAA   407/417
(97 %)
1 diff
(99.8 %id)
BM724505 eye, fetal eye .i 1231 to 1940 1 to 711       711/711
(100 %)
1 diff
(99.9 %id)
BF886682 testis_normal .i 1256 to 1652 1 to 396       396/396
(100 %)
7 diff
(98.3 %id)
DA116703 cerebellum .i 1260 to 1851 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA214580 brain .i 1260 to 1812 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
H08443 whole brain .i 1281 to 1669 1 to 398       398/405
(98 %)
16 diff
(96.1 %id)
BP328798 rectum .i 1289 to 1870 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM750992 Ascites, stomach .i 1303 to 1891 1 to 589       589/589
(100 %)
3 diff
(99.5 %id)
DA395760 thalamus .i 1361 to 1953 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
AA337763 endometrium .i 1383 to 1686 1 to 307       307/307
(100 %)
3 diff
(99.1 %id)
AW955963   .i 1384 to 2015 1 to 627       627/627
(100 %)
11 diff
(98.3 %id)
CF454679 peripheral nervous system .i 1386 to 2122 29 to 764       736/764
(96 %)
6 diff
(99.3 %id)
BM925035 pooled lung and spleen .i 1394 to 2374 1 to 985       985/986
(99 %)
25 diff
(97.5 %id)
DA570167 whole embryo, mainly head .i 1399 to 2243 2 to 848   fully sequenced, capped   847/847
(100 %)
10 diff
(98.9 %id)
DA292659 hippocampus .i 1448 to 2004 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
BP220999 colon .i 1463 to 2018 1 to 556       556/556
(100 %)
4 diff
(99.3 %id)
AW578467 colon .i 1510 to 2163 658 to 10       649/660
(98 %)
0 diff
(100 %id)
AW578458 colon .i 1512 to 2148 633 to 1       633/633
(100 %)
18 diff
(97.2 %id)
AW578450 colon .i 1521 to 2167 648 to 6       643/657
(97 %)
0 diff
(100 %id)
BM729038 eye, fetal eye .i 1524 to 2087 1 to 564   fully sequenced,   564/564
(100 %)
0 diff
(100 %id)
CA395770 eye, RPE/choroid .i 1536 to 2100 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BF334268 colon .i 1575 to 2130 556 to 3       554/556
(99 %)
0 diff
(100 %id)
BM704467 eye, Retina Foveal and Macular .i 1615 to 2180 1 to 566       566/566
(100 %)
0 diff
(100 %id)
W78823 liver and spleen .i 1639 to 2120 1 to 483       483/483
(100 %)
3 diff
(99.4 %id)
CR748404   .i 1640 to 2370 1 to 731       731/731
(100 %)
0 diff
(100 %id)
N39362 melanocyte .i 1669 to 2131 1 to 463       463/463
(100 %)
0 diff
(100 %id)
BP272589   .i 1675 to 2276 1 to 603       603/603
(100 %)
9 diff
(98.6 %id)
DA391954 thalamus .i 1706 to 2301 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
BQ325629 colon_ins .i 1731 to 1899 2 to 171       170/171
(99 %)
6 diff
(96.5 %id)
BF335601 colon .i 1784 to 2153 369 to 1       369/379
(97 %)
2 diff
(99.5 %id)
BF335576 colon .i 1786 to 2363 4 to 583       580/585
(99 %)
9 diff
(98.5 %id)
BF335580 colon .i 1787 to 2153 11 to 376       366/376
(97 %)
5 diff
(98.7 %id)
BF335561 colon .i 1792 to 2153 362 to 1       362/362
(100 %)
2 diff
(99.5 %id)
BF335562 colon .i 1792 to 2153 362 to 1       362/362
(100 %)
0 diff
(100 %id)
BF335567 colon .i 1792 to 2153 1 to 361       361/361
(100 %)
1 diff
(99.8 %id)
BF377072 testis_normal .i 1792 to 2164 376 to 9       368/376
(97 %)
7 diff
(98.2 %id)
BF377080 testis_normal .i 1792 to 2153 381 to 22       360/381
(94 %)
0 diff
(100 %id)
BF335569 colon .i 1793 to 2153 1 to 360       360/360
(100 %)
2 diff
(99.5 %id)
DB136645 thymus .i 1802 to 2348 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DB133392 thymus .i 1806 to 2388 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA522041 brain .i 1808 to 2374 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA389324 thalamus .i 1809 to 2387 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BQ323321 colon_ins .i 1835 to 2208 1 to 372       372/385
(96 %)
4 diff
(99.0 %id)
BM696715 eye, lens .i 1903 to 2441 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
BM716470 eye, lens .i 1903 to 2272 1 to 370       370/370
(100 %)
1 diff
(99.8 %id)
BF335565 colon .i 1932 to 2153 1 to 224       224/224
(100 %)
4 diff
(98.3 %id)
BF805037 colon_ins .i 1951 to 2090 1 to 140       140/140
(100 %)
2 diff
(98.6 %id)
DA915820 small intestine .i 1967 to 2763 2 to 799   capped   798/799
(99 %)
8 diff
(99.0 %id)
BP217267 corpus callosum .i 1972 to 2550 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
CD370786 Alveolar Macrophage, lung .i 2004 to 2771 783 to 17   AAA   767/767
(100 %)
3 diff
(99.7 %id)
BM681978 eye, fetal eye .i 2057 to 2771 720 to 17   fully sequenced, AAA   704/704
(100 %)
5 diff
(99.3 %id)
BM679731 eye, fetal eye .i 2143 to 2788 662 to 17   AAA   646/646
(100 %)
0 diff
(100 %id)
TI_151708477   .i 2150 to 2773 731 to 108       624/731
(85 %)
0 diff
(100 %id)
BU736633 eye, Retina Foveal and Macular .i 2183 to 2771 605 to 17   AAA   589/589
(100 %)
0 diff
(100 %id)
BE561430 Burkitt lymphoma, lymph .i 2205 to 3078 1 to 888       888/943
(94 %)
45 diff
(95.3 %id)
DB356911 whole embryo, mainly head .i 2213 to 2771 551 to 1   fully sequenced,   551/551
(100 %)
18 diff
(96.8 %id)
DA488303 brain .i 2218 to 2781 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BQ016404 lung, Metastatic Chondrosarcoma .i 2218 to 2771 570 to 17   AAA   554/554
(100 %)
0 diff
(100 %id)
BP209189 cerebellum .i 2227 to 2771 1 to 545   AAA   545/545
(100 %)
1 diff
(99.9 %id)
AW006774 colon .i 2241 to 2772 532 to 1       532/532
(100 %)
0 diff
(100 %id)
T78976 liver and spleen .i 2269 to 2440 1 to 172   fully sequenced,   172/172
(100 %)
0 diff
(100 %id)
DB125041 thymus .i 2272 to 2837 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA073797 cerebellum .i 2294 to 2859 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA289119 hippocampus .i 2297 to 2859 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BP383016 ilea mucosa .i 2308 to 3037 1 to 737       737/916
(80 %)
17 diff
(98.2 %id)
AI123756 pooled .i 2322 to 2773 453 to 2       452/453
(99 %)
0 diff
(100 %id)
AW664969 pooled .i 2329 to 2773 454 to 10       445/454
(98 %)
0 diff
(100 %id)
BE858249 brain, glioblastoma (pooled) .i 2339 to 2771 430 to 1       430/430
(100 %)
3 diff
(99.4 %id)
AA629774 lung, lung carcinoma .i 2341 to 2773 434 to 2       433/434
(99 %)
0 diff
(100 %id)
AA699863 liver and spleen .i 2343 to 2771 429 to 1       429/429
(100 %)
7 diff
(98.4 %id)
DB526249 testis .i 2347 to 2771 1 to 425     Submitted on the opposite strand 425/425
(100 %)
1 diff
(99.8 %id)
DA178281 amygdala .i 2350 to 2913 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
AI950886 lung, two pooled squamous cell carcinomas .i 2371 to 2771 401 to 1       401/401
(100 %)
0 diff
(100 %id)
AI037904   .i 2372 to 2773 404 to 3       402/404
(99 %)
0 diff
(100 %id)
N23763 melanocyte .i 2374 to 2788 416 to 1       416/417
(99 %)
3 diff
(99.3 %id)
BP293862 lung .i 2378 to 2959 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BG954138 colon .i 2387 to 2600 1 to 213       213/213
(100 %)
2 diff
(99.1 %id)
BU567995 testis .i 2393 to 2771 1 to 379   AAA   379/379
(100 %)
3 diff
(99.3 %id)
T78923 liver and spleen .i 2410 to 2775 382 to 1   fully sequenced,   382/382
(100 %)
12 diff
(96.9 %id)
BQ183737 Knee, Osteoarthritic Cartilage .i 2430 to 3109 698 to 19   AAA   680/680
(100 %)
0 diff
(100 %id)
DB129355 thymus .i 2459 to 3008 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
AI673647 colon, colonic mucosa from 3 patients with Crohn'sdisease .i 2462 to 2772 310 to 1       310/310
(100 %)
2 diff
(99.4 %id)
H08729 whole brain .i 2463 to 2771 328 to 21   AAA   308/313
(98 %)
1 diff
(99.7 %id)
AI097598 brain, glioblastoma (pooled) .i 2466 to 2773 309 to 2       308/309
(99 %)
0 diff
(100 %id)
BF439998 brain, glioblastoma (pooled) .i 2466 to 2771 306 to 1       306/306
(100 %)
0 diff
(100 %id)
DA343024 substantia nigra .i 2475 to 2951 2 to 478   capped   477/477
(100 %)
0 diff
(100 %id)
AI418869 brain, glioblastoma (pooled) .i 2483 to 2766 284 to 1       284/284
(100 %)
0 diff
(100 %id)
D59376 brain .i 2490 to 2771 287 to 1       287/287
(100 %)
7 diff
(97.6 %id)
DB342670 thymus .i 2518 to 3109 593 to 1       593/593
(100 %)
2 diff
(99.7 %id)
BX645052   .i 2577 to 3247 1 to 669       669/669
(100 %)
4 diff
(99.5 %id)
BF594216 brain, glioblastoma (pooled) .i 2577 to 3102 526 to 1       526/526
(100 %)
0 diff
(100 %id)
AA662311 normal prostate, Prostate .i 2602 to 3109 508 to 1       508/508
(100 %)
0 diff
(100 %id)
DB577383 hypothalamus .i 2627 to 3107 1 to 481     Submitted on the opposite strand 481/483
(99 %)
4 diff
(99.2 %id)
DA136958 alzheimer cortex .i 2636 to 3181 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BU188355 melanotic melanoma, skin .i 2646 to 3532 1 to 884       884/889
(99 %)
18 diff
(98.0 %id)
DA074594 cerebellum .i 2655 to 3228 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA256180 caudate nucleus .i 2701 to 3273 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
BX488406   .i 2727 to 3148 1 to 422       422/422
(100 %)
2 diff
(99.6 %id)
AA508695 colon .i 2775 to 3109 335 to 1       335/335
(100 %)
0 diff
(100 %id)
BP220446 colon .i 2783 to 3360 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DA132370 alzheimer cortex .i 2787 to 3350 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
F12921 brain, total brain .i 2803 to 3071 1 to 269       269/269
(100 %)
2 diff
(99.3 %id)
AA948307 pooled germ cell tumors .i 2812 to 3109 298 to 1       298/298
(100 %)
0 diff
(100 %id)
H29713 whole brain .i 2826 to 3244 1 to 422       422/427
(98 %)
5 diff
(98.9 %id)
T75232 whole brain .i 2830 to 3273 1 to 447       447/471
(94 %)
22 diff
(95.4 %id)
BM795590 stomach .i 2875 to 3502 1 to 628       628/628
(100 %)
1 diff
(99.9 %id)
DA076615 cerebellum .i 2898 to 3484 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DB175898 kidney, tumor tissue .i 2901 to 3476 2 to 578   tiling clone, capped   577/577
(100 %)
4 diff
(99.4 %id)
BM798375 Ascites, stomach .i 2916 to 3144 1 to 229       229/229
(100 %)
0 diff
(100 %id)
W80723 liver and spleen .i 2930 to 3052 124 to 1       124/130
(95 %)
1 diff
(99.3 %id)
DA686792   .i 2934 to 3463 2 to 530   capped   529/529
(100 %)
2 diff
(99.7 %id)
DR980234 placenta .i 2966 to 3109 1 to 143   AAA Submitted on the opposite strand 143/143
(100 %)
2 diff
(98.7 %id)
DT215240 brain .i 3085 to 3672 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
DB322959   .i 4076 to 4637 568 to 7       562/568
(98 %)
0 diff
(100 %id)
DB331626 small intestine .i 4163 to 4637 479 to 7       473/482
(98 %)
0 diff
(100 %id)
R43685 whole brain .i 4285 to 4660 387 to 1   tiling clone,   387/387
(100 %)
13 diff
(96.7 %id)
H29620 whole brain .i 4287 to 4660 379 to 1       379/379
(100 %)
0 diff
(100 %id)
F10522 brain, total brain .i 4330 to 4637 314 to 7       308/314
(98 %)
0 diff
(100 %id)
DB307702 hippocampus .i 4391 to 4637 253 to 7       247/253
(97 %)
0 diff
(100 %id)
DA055971 cerebellum .j-u 1 to 587 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
CB046720 2 pooled tumors (clear cell type), Kidney .j-u 81 to 515 1 to 435     Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 435/435
(100 %)
7 diff
(98.4 %id)
BX117984 heart .j-u 772 to 1249 1 to 478   tiling clone,   478/478
(100 %)
0 diff
(100 %id)
EL953404 eyeball .j-u 885 to 1418 1 to 535       535/535
(100 %)
10 diff
(98.2 %id)
BQ005440 Chondrosarcoma, Left Pelvis .j-u 1023 to 1676 669 to 17 Y95C I107M tiling clone, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 653/653
(100 %)
4 diff
(99.4 %id)
BQ787693 insulinoma, Pancreas .j-u 1063 to 1683 637 to 17 Y50N Y95C I107M H109R N119G AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 621/621
(100 %)
8 diff
(98.8 %id)
CK825307 insulinoma, Pancreas .j-u 1133 to 1685 557 to 5 Y50N Y95C I107M H109R N119G tiling clone,   553/557
(99 %)
0 diff
(100 %id)
BQ128285 insulinoma, Pancreas .j-u 1166 to 1683 534 to 17 Y50N Y95C I107M H109R N119G AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 518/518
(100 %)
8 diff
(98.5 %id)
BQ272573 insulinoma, Pancreas .j-u 1166 to 1683 534 to 17 Y50N Y95C I107M H109R N119G AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 518/518
(100 %)
8 diff
(98.5 %id)
BM310175 insulinoma, Pancreas .j-u 1168 to 1683 531 to 16 Y50N Y95C I107M H109R N119G AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 516/516
(100 %)
8 diff
(98.5 %id)
AI090818 heart .j-u 1259 to 1676 430 to 13   tiling clone, AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 418/418
(100 %)
4 diff
(99.1 %id)
T16505   .j-u 1401 to 1683 283 to 1       283/283
(100 %)
7 diff
(97.6 %id)
CB046719 2 pooled tumors (clear cell type), Kidney .j-u 1581 to 1676 125 to 30   AAA Possibly primed on the genome, locally A rich (32/32 A in genome downstream of last aligned base) 96/96
(100 %)
2 diff
(98.0 %id)
DR977789 brain .j-u 1587 to 1685 1 to 98     Submitted on the opposite strand 98/106
(92 %)
6 diff
(94.4 %id)
DR979896 placenta .j-u 1587 to 1671 1 to 84     Submitted on the opposite strand 84/93
(90 %)
5 diff
(94.7 %id)
DA683934   .k 1 to 450 2 to 451 exact tiling clone, capped   450/453
(99 %)
3 diff
(99.4 %id)
DB471510 hippocampus .l 1 to 492 5 to 496 L17P tiling clone,   496/496
(100 %)
2 diff
(99.6 %id)
BP376597 uterus .m 1 to 583 2 to 582 K95S L96Y L97C     582/582
(100 %)
6 diff
(99.0 %id)
DB247534 uterus .m 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DA109038 cerebellum .m 3 to 590 2 to 590 exact capped   589/589
(100 %)
1 diff
(99.9 %id)
DA376385 thalamus .m 27 to 577 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
CB988694 Human Placenta, placenta .m 35 to 604 28 to 597 exact tiling clone,   752/779
(96 %)
20 diff
(97.5 %id)
CB990215 Human Placenta, placenta .m 35 to 612 28 to 610 exact     583/840
(69 %)
17 diff
(98.0 %id)
AL039698 testis .m 102 to 479 1 to 380 L62A D63G E64*     380/380
(100 %)
3 diff
(99.3 %id)
DN991169 brain, whole brain .m 109 to 584 9 to 484 exact     476/484
(98 %)
10 diff
(98.0 %id)
DB216443 trachea .m 120 to 652 2 to 535 G36X Y37L A38C I39N V40C ... tiling clone, capped   534/534
(100 %)
2 diff
(99.7 %id)
DC308007 cerebellum .n 1 to 557 1 to 558 exact tiling clone,   558/558
(100 %)
1 diff
(99.9 %id)
DA557645   .o 1 to 579 2 to 582 S16V F17L K18* tiling clone, capped   581/581
(100 %)
2 diff
(99.7 %id)
TI_57199836   .o 15 to 869 67 to 927 exact AAA   861/1079
(79 %)
62 diff
(94.3 %id)
BX436796 thymus .o 20 to 891 1 to 865 exact tiling clone,   865/865
(100 %)
15 diff
(98.3 %id)
BI818859 pooled brain, lung, testis .o 20 to 869 1 to 856 exact tiling clone,   856/1023
(83 %)
56 diff
(94.6 %id)
BX414969 thymus .o 1374 to 1857 484 to 1   tiling clone,   484/484
(100 %)
7 diff
(98.6 %id)
BP350433 brain .p 1 to 582 1 to 582 D46G tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DC376935 brain .q 1 to 552 1 to 556 exact tiling clone,   556/556
(100 %)
5 diff
(99.2 %id)
DA483668 brain .q 32 to 531 2 to 502   tiling clone, capped   501/502
(99 %)
3 diff
(99.5 %id)
DA230019 brain .r 1 to 539 2 to 540 exact tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
AW271462 Kidney .s 1 to 516 519 to 4 exact tiling clone,   516/519
(99 %)
1 diff
(99.9 %id)
AK128085 testis Gene PAQR8andEFHC1, variant not shown       available from FLJ,      
DB311907 thalamus Gene PAQR8andEFHC1, variant not shown              
DA394823 thalamus Gene PAQR8andEFHC1, variant not shown       capped      
DB068723 testis Gene PAQR8andEFHC1, variant not shown       capped      
165 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n, .o, .p, .q, .r, .s Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI