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Gene NECAB2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
48 supporting clones for gene NECAB2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA259205 caudate nucleus .a 1 to 534 2 to 535   tiling clone, capped   534/534
(100 %)
1 diff
(99.9 %id)
BI488593 brain .a 88 to 929 1 to 847   tiling clone,   847/1012
(83 %)
18 diff
(98.3 %id)
TI_45379171   .a 88 to 929 101 to 947       847/1112
(76 %)
12 diff
(99.0 %id)
BF529612 anaplastic oligodendroglioma with 1p/19qloss, brain .a 547 to 1169 1 to 622   available from MGC,   622/622
(100 %)
1 diff
(99.9 %id)
BC016979 Brain, anaplastic oligodendroglioma with1p/19q loss .a 548 to 2147 1 to 1600   tiling clone, available from MGC, AAA   1600/1600
(100 %)
0 diff
(100 %id)
DB306626 caudate nucleus .a 1625 to 2150 524 to 1   tiling clone,   524/524
(100 %)
1 diff
(99.9 %id)
BI551955 brain, hippocampus .b 1 to 778 1 to 783   tiling clone,   783/834
(93 %)
22 diff
(97.4 %id)
TI_44171668   .b 2 to 778 83 to 864       782/915
(85 %)
20 diff
(97.9 %id)
AY299331 brain .b 8 to 1611 1 to 1604 exact tiling clone, AAA   1604/1604
(100 %)
0 diff
(100 %id)
NM_019065.2   .b 8 to 1611 1 to 1604 exact RefSeq, AAA   1604/1604
(100 %)
0 diff
(100 %id)
TI_57219008   .b 39 to 869 96 to 946       848/992
(85 %)
34 diff
(96.6 %id)
BM809002 brain, hippocampus .b 41 to 684 78 to 725       646/1407
(45 %)
15 diff
(99.0 %id)
BI753891 brain .b 43 to 869 1 to 847       844/893
(94 %)
37 diff
(95.9 %id)
BI488426 brain .b 76 to 869 1 to 796       796/796
(100 %)
8 diff
(99.0 %id)
TI_45378848   .b 76 to 869 61 to 856       796/856
(92 %)
6 diff
(99.3 %id)
AK127376 subthalamic nucleus .b 87 to 1614 1 to 1528   available from FLJ,   1528/1528
(100 %)
0 diff
(100 %id)
DA360525 subthalamic nucleus .b 88 to 407 2 to 321   capped   320/320
(100 %)
0 diff
(100 %id)
BI819305 pooled brain, lung, testis .b 141 to 925 1 to 788       786/788
(99 %)
11 diff
(98.7 %id)
TI_57200165   .b 141 to 820 46 to 725       680/833
(81 %)
3 diff
(99.7 %id)
TI_57216511   .b 217 to 968 19 to 770       752/771
(97 %)
1 diff
(99.9 %id)
BI755862 brain .b 226 to 968 1 to 743       743/744
(99 %)
1 diff
(99.9 %id)
AF070637 brain .b 413 to 1614 1 to 1202   AAA   1202/1202
(100 %)
0 diff
(100 %id)
T80509 whole brain .b 414 to 678 1 to 264       264/264
(100 %)
3 diff
(98.9 %id)
R56588 whole brain .b 414 to 843 1 to 434       434/434
(100 %)
8 diff
(98.2 %id)
AF193758   .b 415 to 1281 1 to 867       867/867
(100 %)
0 diff
(100 %id)
TI_1948073571   .b 465 to 904 135 to 574   fully sequenced,   440/574
(76 %)
0 diff
(100 %id)
TI_1948073908   .b 465 to 904 133 to 572   fully sequenced,   440/572
(76 %)
0 diff
(100 %id)
CV023508 mixed .b 466 to 1029 1 to 564       564/564
(100 %)
0 diff
(100 %id)
TI_1948074090   .b 474 to 1191 844 to 119       726/1320
(55 %)
17 diff
(98.8 %id)
BC131615 PCR rescued clones .b 533 to 1530 12 to 1009       998/1009
(98 %)
0 diff
(100 %id)
TI_1948073738   .b 639 to 1191 671 to 119       553/1277
(43 %)
28 diff
(97.9 %id)
BF345121 anaplastic oligodendroglioma with 1p/19qloss, brain .b 739 to 1434 30 to 718       689/1017
(67 %)
18 diff
(98.3 %id)
BI488688 brain .b 795 to 1613 1 to 820       820/825
(99 %)
26 diff
(96.9 %id)
BX281338 brain .b 796 to 1299 1 to 504       504/504
(100 %)
0 diff
(100 %id)
TI_45379361   .b 796 to 1613 86 to 904       819/909
(90 %)
25 diff
(97.3 %id)
BF966983 brain, hippocampus .b 820 to 1578 780 to 28       753/835
(90 %)
10 diff
(98.9 %id)
TI_1948073572   .b 843 to 1191 470 to 122   fully sequenced,   349/470
(74 %)
0 diff
(100 %id)
TI_1948073909   .b 843 to 1191 471 to 123   fully sequenced,   349/471
(74 %)
0 diff
(100 %id)
BQ933194 large cell carcinoma, lung .b 881 to 1611 766 to 23   AAA Submitted on the opposite strand 744/940
(79 %)
15 diff
(98.5 %id)
BF820904 kidney_tumor .b 1119 to 1411 293 to 1     Submitted on the opposite strand 293/293
(100 %)
1 diff
(99.7 %id)
AI244349 Kidney .b 1225 to 1615 393 to 3       391/393
(99 %)
0 diff
(100 %id)
R56589 whole brain .b 1239 to 1614 416 to 35   AAA   382/386
(98 %)
19 diff
(95.1 %id)
BF528327 anaplastic oligodendroglioma with 1p/19qloss, brain .b 1399 to 1611 1 to 213   AAA   213/213
(100 %)
0 diff
(100 %id)
CB156405 brain .c 1 to 549 1 to 549   tiling clone,   549/549
(100 %)
1 diff
(99.9 %id)
BM995261 Chondrosarcoma, Left Pubic Bone .c 516 to 1131 631 to 16   tiling clone, AAA   616/616
(100 %)
1 diff
(99.9 %id)
DA220615 brain .d 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
BM887712 eye .e 1 to 429 1 to 430 I10X V132R R133E L134A S135L ... tiling clone,   430/430
(100 %)
1 diff
(99.8 %id)
DA251395 caudate nucleus .f-u 1 to 591 2 to 592 exact tiling clone, capped   591/592
(99 %)
1 diff
(99.9 %id)
DB303061 amygdala Gene NECAB2, variant not shown              
DA184450 amygdala Gene NECAB2, variant not shown       capped      
DB309390 hippocampus Gene NECAB2, variant not shown              
DA326120 hippocampus Gene NECAB2, variant not shown       capped      
CN287716 embryonic stem cells, cell lines H1, H7, andH9 Gene NECAB2, variant not shown              
BM807800 brain, hippocampus Gene NECAB2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI