cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
CR608034 | B cells (Ramos cell line) | .a-u | 1 to 1733 | 1 to 1733 | exact | tiling clone, | 1733/1733 (100 %) | 0 diff (100 %id) | |
CR612101 | neuroblastoma | .a-u | 67 to 1711 | 1 to 1645 | exact | 1645/1645 (100 %) | 0 diff (100 %id) | ||
EC471506 | Prostate | .a-u | 1332 to 1425 | 4 to 97 | 94/97 (96 %) | 5 diff (94.9 %id) | |||
EC488649 | Prostate | .a-u | 1341 to 1437 | 1 to 96 | 96/96 (100 %) | 6 diff (93.8 %id) | |||
EC508313 | Prostate | .a-u | 1336 to 1412 | 15 to 90 | 76/90 (84 %) | 6 diff (93.4 %id) | |||
EC525011 | Prostate | .a-u | 952 to 1043 | 1 to 92 | 92/99 (92 %) | 6 diff (94.0 %id) | |||
EC530150 | Prostate | .a-u | 1336 to 1422 | 10 to 96 | 87/99 (87 %) | 7 diff (93.0 %id) | |||
EC559285. matches multiple genes | Prostate | .a-u | 1344 to 1432 | 1 to 89 | also hits gene EEF1A1P5, EEF1A1P6 | 89/89 (100 %) | 0 diff (100 %id) | ||
EC566417 | Prostate | .a-u | 1340 to 1422 | 1 to 82 | 82/86 (95 %) | 3 diff (96.6 %id) | |||
BG493643 | lung, mucoepidermoid carcinoma | .a-u | 688 to 1355 | 1 to 678 | 678/877 (77 %) | 53 diff (94.0 %id) | |||
NR_003586.1 | .a-u | 67 to 1711 | 1 to 1645 | exact | RefSeq, | 1645/1645 (100 %) | 0 diff (100 %id) | ||
AW178872 | stomach | .a-u | 67 to 1711 | 1 to 1645 | RefSeq, | Suspected internal deletion, this clone was ignored | 1645/1645 (100 %) | 0 diff (100 %id) |