cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AA723583 | parathyroid gland, parathyroid tumor | .s-u | 2451 to 2870 | 420 to 1 | V37I | tiling clone, | 420/420 (100 %) | 1 diff (99.8 %id) | |
AA321984 | brain, cerebellum | .s-u | 2339 to 2677 | 1 to 339 | 339/341 (99 %) | 1 diff (99.8 %id) | |||
AA331564 | Embryo, 8 weeks | .b | 255 to 523 | 1 to 269 | 269/269 (100 %) | 0 diff (100 %id) | |||
AA332587 | Embryo, 8 weeks | .b | 255 to 660 | 1 to 404 | 404/412 (98 %) | 7 diff (98.4 %id) | |||
AA376593 | lung | .c | 206 to 496 | 1 to 291 | 291/291 (100 %) | 1 diff (99.7 %id) | |||
AB014575 | brain | .a | 62 to 4307 | 1 to 4246 | exact | tiling clone, available from KIAA, | 4246/4246 (100 %) | 1 diff (100.0 %id) | |
BP194491 | brain | .k | 170 to 752 | 1 to 583 | 583/583 (100 %) | 1 diff (99.9 %id) | |||
AF279370 | .b | 2341 to 5534 | 1 to 3192 | tiling clone, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 3192/3192 (100 %) | 9 diff (99.8 %id) | ||
AI908226 | breast | .b | 2605 to 3005 | 408 to 8 | 401/411 (97 %) | 4 diff (99.1 %id) | |||
AK023138 | .b | 232 to 4727 | 1 to 4496 | exact | tiling clone, available from FLJ, | 4496/4496 (100 %) | 1 diff (100.0 %id) | ||
AK023389 | ovary, tumor tissue | .b | 191 to 2392 | 1 to 2202 | available from FLJ, | 2202/2202 (100 %) | 1 diff (100.0 %id) | ||
DA028541 | .b | 2527 to 3081 | 2 to 556 | capped | 555/555 (100 %) | 0 diff (100 %id) | |||
AW880920 | ovary | .t-u | 1720 to 2271 | 550 to 3 | tiling clone, | 548/550 (99 %) | 0 diff (100 %id) | ||
AW895546 | nervous_normal | .u | 814 to 1165 | 1 to 351 | tiling clone, | 351/351 (100 %) | 3 diff (99.2 %id) | ||
AW895556 | nervous_normal | .u | 907 to 1251 | 356 to 10 | tiling clone, | 347/356 (97 %) | 0 diff (100 %id) | ||
AW955009 | .s-u | 2340 to 2996 | 1 to 652 | V37I | tiling clone, | 652/653 (99 %) | 16 diff (97.6 %id) | ||
AW962545 | .b | 256 to 777 | 1 to 523 | 523/523 (100 %) | 14 diff (97.4 %id) | ||||
AW971600 | .e | 483 to 1053 | 574 to 1 | tiling clone, | Submitted on the opposite strand | 574/577 (99 %) | 19 diff (96.8 %id) | ||
AY227651 | Liver | .b | 254 to 2419 | 1 to 2166 | 2166/2166 (100 %) | 0 diff (100 %id) | |||
AY227652 | Liver | .b | 2089 to 4819 | 1 to 2731 | 2731/2731 (100 %) | 3 diff (99.9 %id) | |||
AY227653 | Liver | .c | 1467 to 5473 | 1 to 4001 | tiling clone, | 4001/4001 (100 %) | 12 diff (99.8 %id) | ||
AY227654 | uterus | .f | 1 to 5164 | 1 to 5164 | exact | tiling clone, | 5164/5164 (100 %) | 3 diff (100.0 %id) | |
AY495710 | .a | 2988 to 4307 | 1 to 1320 | 1320/1320 (100 %) | 1 diff (100.0 %id) | ||||
CB155224 | brain | .b | 4162 to 4728 | 1 to 568 | 568/574 (98 %) | 2 diff (99.7 %id) | |||
BC063882 | testis | .b | 247 to 5540 | 1 to 5292 | exact | tiling clone, available from MGC, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 5292/5292 (100 %) | 4 diff (100.0 %id) |
BE140665 | head_neck | .b | 2619 to 2995 | 1 to 377 | 377/377 (100 %) | 1 diff (99.8 %id) | |||
BE707295 | head_neck | .f | 2621 to 3287 | 1 to 666 | 666/670 (99 %) | 3 diff (99.6 %id) | |||
BE707300 | head_neck | .f | 2619 to 3279 | 1 to 660 | 660/660 (100 %) | 9 diff (98.7 %id) | |||
BE707305 | head_neck | .f | 2621 to 3292 | 1 to 669 | 669/723 (92 %) | 5 diff (99.4 %id) | |||
BE707307 | head_neck | .f | 2619 to 3273 | 1 to 654 | 654/654 (100 %) | 4 diff (99.4 %id) | |||
BE707308 | head_neck | .f | 2621 to 3314 | 1 to 693 | 693/695 (99 %) | 3 diff (99.6 %id) | |||
BE774058 | prostate_tumor | .s-u | 2357 to 2726 | 29 to 401 | 373/401 (93 %) | 6 diff (98.6 %id) | |||
BE774071 | prostate_tumor | .s-u | 2376 to 2726 | 1 to 348 | 348/348 (100 %) | 14 diff (96.0 %id) | |||
BF092666 | testis_normal | .b | 2569 to 3092 | 1 to 524 | 524/524 (100 %) | 13 diff (97.6 %id) | |||
BF094174 | uterus_tumor | .b | 1987 to 2385 | 411 to 14 | 400/411 (97 %) | 1 diff (99.8 %id) | |||
BF910634 | uterus_tumor | .s-u | 1495 to 1676 | 182 to 1 | tiling clone, | Submitted on the opposite strand | 182/184 (98 %) | 2 diff (99.0 %id) | |
BF927652 | nervous_tumor | .b | 3959 to 4064 | 1 to 106 | 106/118 (89 %) | 6 diff (95.0 %id) | |||
BF954318 | nervous_normal | .b | 3053 to 3337 | 288 to 5 | 284/288 (98 %) | 1 diff (99.7 %id) | |||
BG978385 | colon_ins | .b | 3497 to 3836 | 1 to 341 | 341/363 (93 %) | 13 diff (96.5 %id) | |||
BM352469 | Pancreas, Purified pancreatic islet | .a | 3722 to 4306 | 585 to 1 | 585/585 (100 %) | 1 diff (99.9 %id) | |||
BM352787 | Pancreas, Purified pancreatic islet | .b | 3451 to 4051 | 1 to 601 | 601/601 (100 %) | 2 diff (99.7 %id) | |||
BM353664 | Pancreas, Purified pancreatic islet | .a | 3683 to 4306 | 624 to 1 | 624/624 (100 %) | 1 diff (99.9 %id) | |||
BM353946 | Pancreas, Purified pancreatic islet | .b | 3454 to 4052 | 18 to 616 | 599/616 (97 %) | 6 diff (99.1 %id) | |||
BQ340182 | nervous_normal | .b | 3013 to 3326 | 1 to 313 | 313/313 (100 %) | 10 diff (96.9 %id) | |||
BQ360912 | ovary | .b | 4092 to 4328 | 244 to 11 | 234/244 (95 %) | 0 diff (100 %id) | |||
DA078867 | cerebellum | .a | 45 to 539 | 2 to 496 | capped | 495/495 (100 %) | 1 diff (99.8 %id) | ||
DA101491 | cerebellum | .c | 451 to 1029 | 2 to 580 | capped | 579/579 (100 %) | 1 diff (99.9 %id) | ||
DA102255 | cerebellum | .o-u | 1 to 592 | 2 to 594 | C28X L31P S32F I34D S35L ... | tiling clone, capped | 593/593 (100 %) | 2 diff (99.7 %id) | |
DA103937 | cerebellum | .b | 1068 to 1613 | 2 to 548 | capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
DA122198 | cerebellum | .b | 1996 to 2545 | 2 to 551 | capped | 550/550 (100 %) | 1 diff (99.9 %id) | ||
DA147247 | amygdala | .b | 2541 to 3125 | 2 to 587 | capped | 584/586 (99 %) | 0 diff (100 %id) | ||
DA149447 | amygdala | .q | 1 to 484 | 2 to 484 | V69G T84L M85C Q86S L87* | tiling clone, capped | 483/483 (100 %) | 3 diff (99.4 %id) | |
DA158613 | amygdala | .b | 1820 to 2399 | 2 to 581 | capped | 580/580 (100 %) | 0 diff (100 %id) | ||
DA171878 | amygdala | .a | 16 to 569 | 2 to 555 | capped | 554/554 (100 %) | 0 diff (100 %id) | ||
DA182216 | amygdala | .a | 4 to 575 | 2 to 574 | capped | 573/573 (100 %) | 2 diff (99.7 %id) | ||
DA212710 | brain | .b | 233 to 790 | 2 to 559 | capped | 558/558 (100 %) | 0 diff (100 %id) | ||
DA230027 | brain | .b | 254 to 799 | 2 to 547 | capped | 546/546 (100 %) | 1 diff (99.9 %id) | ||
DA230752 | brain | .b | 1379 to 1938 | 2 to 563 | capped | 562/562 (100 %) | 2 diff (99.7 %id) | ||
DA231913 | brain | .b | 190 to 756 | 2 to 568 | capped | 567/568 (99 %) | 2 diff (99.7 %id) | ||
DA233931 | brain | .b | 652 to 1231 | 2 to 582 | capped | 581/581 (100 %) | 1 diff (99.9 %id) | ||
DA235357 | brain | .b | 449 to 1031 | 2 to 584 | capped | 583/583 (100 %) | 0 diff (100 %id) | ||
DA238228 | brain | .b | 219 to 770 | 2 to 553 | capped | 552/552 (100 %) | 1 diff (99.9 %id) | ||
DA267935 | caudate nucleus | .b | 2804 to 3368 | 2 to 567 | capped | 566/566 (100 %) | 2 diff (99.7 %id) | ||
DA291240 | hippocampus | .k | 1 to 575 | 2 to 576 | tiling clone, capped | 575/575 (100 %) | 1 diff (99.9 %id) | ||
DA291807 | hippocampus | .b | 918 to 1498 | 2 to 582 | capped | 581/581 (100 %) | 0 diff (100 %id) | ||
DA296616 | hippocampus | .b | 2382 to 2973 | 2 to 593 | capped | 592/593 (99 %) | 1 diff (99.9 %id) | ||
DA311054 | hippocampus | .b | 233 to 804 | 2 to 573 | capped | 572/572 (100 %) | 0 diff (100 %id) | ||
DA320440 | hippocampus | .b | 810 to 1375 | 2 to 567 | capped | 566/566 (100 %) | 2 diff (99.7 %id) | ||
DA321867 | hippocampus | .n | 1 to 559 | 2 to 560 | exact | tiling clone, capped | 559/559 (100 %) | 0 diff (100 %id) | |
DA325874 | hippocampus | .c | 1 to 540 | 2 to 541 | tiling clone, capped | 540/540 (100 %) | 0 diff (100 %id) | ||
DA329667 | hippocampus | .a | 1 to 561 | 2 to 562 | tiling clone, capped | 561/561 (100 %) | 0 diff (100 %id) | ||
DA329866 | hippocampus | .a | 4 to 571 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
DA330075 | hippocampus | .b | 231 to 770 | 2 to 542 | capped | 541/541 (100 %) | 3 diff (99.5 %id) | ||
DA330142 | hippocampus | .b | 1545 to 2108 | 2 to 567 | capped | 566/566 (100 %) | 3 diff (99.5 %id) | ||
DA387146 | thalamus | .b | 241 to 842 | 2 to 603 | capped | 602/602 (100 %) | 1 diff (99.9 %id) | ||
DA391251 | thalamus | .c | 5 to 575 | 2 to 573 | capped | 572/572 (100 %) | 1 diff (99.9 %id) | ||
DA410191 | thalamus | .b | 1937 to 2485 | 2 to 550 | capped | 549/549 (100 %) | 0 diff (100 %id) | ||
DA412930 | thalamus | .b | 45 to 605 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) | ||
BX094497 | liver and spleen | .a | 3206 to 3991 | 57 to 842 | 786/842 (93 %) | 7 diff (99.2 %id) | |||
CN282424 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .f | 2679 to 2940 | 1 to 262 | 262/262 (100 %) | 3 diff (98.9 %id) | |||
CN361665 | embryonic stem cells, DMSO-treated H9 cellline | .b | 3603 to 4316 | 1 to 715 | 715/715 (100 %) | 3 diff (99.6 %id) | |||
CN361666 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .b | 226 to 690 | 1 to 465 | 465/465 (100 %) | 4 diff (99.2 %id) | |||
CN361667 | embryonic stem cells, cell lines H1, H7, andH9 | .b | 1854 to 2604 | 1 to 751 | 751/751 (100 %) | 1 diff (99.9 %id) | |||
CN361668 | embryonic stem cells, cell lines H1, H7, andH9 | .b | 259 to 845 | 1 to 588 | 588/588 (100 %) | 1 diff (99.9 %id) | |||
CN361669 | embryonic stem cells, DMSO-treated H9 cellline | .b | 2476 to 2977 | 1 to 502 | 502/502 (100 %) | 0 diff (100 %id) | |||
CN361670 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .c | 292 to 1046 | 1 to 755 | 755/759 (99 %) | 1 diff (99.9 %id) | |||
CN361671 | embryonic stem cells, DMSO-treated H9 cellline | .b | 2380 to 3031 | 1 to 652 | 652/652 (100 %) | 0 diff (100 %id) | |||
CN361672 | embryonic stem cells, cell lines H1, H7, andH9 | .b | 2845 to 3445 | 1 to 601 | 601/601 (100 %) | 5 diff (99.2 %id) | |||
CN361673 | embryonic stem cells, DMSO-treated H9 cellline | .b | 3800 to 4405 | 1 to 605 | 605/605 (100 %) | 1 diff (99.9 %id) | |||
CN361674 | embryonic stem cells, DMSO-treated H9 cellline | .b | 1190 to 1859 | 1 to 672 | 672/672 (100 %) | 2 diff (99.8 %id) | |||
CN361675 | embryonic stem cells, DMSO-treated H9 cellline | .f | 2612 to 3228 | 1 to 618 | 618/618 (100 %) | 2 diff (99.7 %id) | |||
CN361676 | embryonic stem cells, cell lines H1, H7, andH9 | .d | 1 to 706 | 1 to 705 | tiling clone, | 705/705 (100 %) | 3 diff (99.6 %id) | ||
CN361677 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .r | 1 to 737 | 1 to 735 | exact | tiling clone, | 735/735 (100 %) | 3 diff (99.6 %id) | |
CR737733 | pooled | .s-u | 292 to 751 | 1 to 460 | tiling clone, | 460/460 (100 %) | 2 diff (99.6 %id) | ||
CR739402 | .b | 4315 to 4727 | 429 to 17 | 413/429 (96 %) | 0 diff (100 %id) | ||||
CR747846 | testis | .b | 702 to 1082 | 1 to 381 | 381/381 (100 %) | 0 diff (100 %id) | |||
BX451457 | brain, fetal brain | .b | 2845 to 3304 | 1 to 460 | 460/460 (100 %) | 17 diff (96.4 %id) | |||
BX460431 | brain, fetal brain | .f | 2654 to 3483 | 1 to 831 | tiling clone, | 831/831 (100 %) | 4 diff (99.6 %id) | ||
CA391383 | eye, RPE/choroid | .b | 876 to 1280 | 25 to 431 | 407/431 (94 %) | 23 diff (94.7 %id) | |||
CA392570 | eye, RPE/choroid | .l | 1 to 693 | 1 to 693 | exact | tiling clone, | 693/693 (100 %) | 0 diff (100 %id) | |
CA392913 | eye, RPE/choroid | .b | 797 to 1312 | 2 to 517 | 516/517 (99 %) | 0 diff (100 %id) | |||
CV357766 | testis_normal | .b | 2540 to 2673 | 10 to 142 | 133/144 (92 %) | 14 diff (90.3 %id) | |||
AL599910 | .r | 540 to 929 | 1 to 388 | tiling clone, | 388/388 (100 %) | 2 diff (99.5 %id) | |||
AL046648 | testis | .b | 1992 to 2640 | 1 to 648 | 648/648 (100 %) | 1 diff (99.9 %id) | |||
AL046649 | testis | .b | 4201 to 4727 | 567 to 41 | AAA | 527/527 (100 %) | 7 diff (98.7 %id) | ||
AL037785 | brain | .b | 206 to 576 | 1 to 371 | 371/371 (100 %) | 4 diff (99.0 %id) | |||
AL037834 | brain | .b | 206 to 840 | 1 to 635 | 635/635 (100 %) | 4 diff (99.4 %id) | |||
BX642469 | .m | 1 to 663 | 1 to 663 | exact | tiling clone, | 663/663 (100 %) | 1 diff (99.9 %id) | ||
BX642483 | .k | 246 to 917 | 1 to 672 | exact | tiling clone, | 672/672 (100 %) | 1 diff (99.9 %id) | ||
AL698887 | human skeletal muscle | .c | 431 to 856 | 1 to 425 | 425/425 (100 %) | 1 diff (99.8 %id) | |||
AL705698 | human skeletal muscle | .b | 1274 to 1945 | 1 to 670 | 670/670 (100 %) | 4 diff (99.5 %id) | |||
AL704450 | human skeletal muscle | .b | 231 to 825 | 1 to 597 | 597/597 (100 %) | 5 diff (99.2 %id) | |||
BX495180 | Liver | .b | 1 to 574 | 3 to 577 | tiling clone, | 577/577 (100 %) | 5 diff (99.2 %id) | ||
BX643097 | .b | 187 to 747 | 7 to 568 | 562/568 (98 %) | 6 diff (99.0 %id) | ||||
BX643098 | .b | 186 to 435 | 1 to 253 | 253/259 (97 %) | 14 diff (94.6 %id) | ||||
BX643144 | .b | 213 to 671 | 1 to 459 | 459/459 (100 %) | 1 diff (99.8 %id) | ||||
EL737047 | mixed | .b | 422 to 1005 | 1 to 584 | 584/590 (98 %) | 6 diff (99.0 %id) | |||
DA494378 | brain | .b | 32 to 589 | 2 to 559 | tiling clone, capped | 558/558 (100 %) | 0 diff (100 %id) | ||
DA496896 | brain | .c | 1 to 520 | 2 to 521 | capped | 520/520 (100 %) | 0 diff (100 %id) | ||
DA515628 | brain | .c | 432 to 986 | 2 to 557 | capped | 556/556 (100 %) | 1 diff (99.9 %id) | ||
DC352815 | brain | .b | 39 to 502 | 1 to 464 | 464/464 (100 %) | 1 diff (99.8 %id) | |||
FN093966 | breast carcinoma | .b | 1160 to 1227 | 68 to 1 | Submitted on the opposite strand | 68/69 (98 %) | 0 diff (100 %id) | ||
FN116872 | breast carcinoma | .b | 4656 to 4726 | 76 to 4 | Submitted on the opposite strand | 73/76 (96 %) | 0 diff (100 %id) | ||
FN135446 | breast carcinoma | .b | 2080 to 2172 | 94 to 1 | Submitted on the opposite strand | 94/94 (100 %) | 1 diff (99.0 %id) | ||
FN145761 | breast carcinoma | .f | 2145 to 2250 | 1 to 105 | 105/105 (100 %) | 1 diff (99.1 %id) | |||
FN168134 | breast carcinoma | .b | 1093 to 1202 | 109 to 1 | Submitted on the opposite strand | 109/109 (100 %) | 1 diff (99.1 %id) | ||
D61581 | .s-u | 2184 to 2509 | 1 to 326 | tiling clone, | 326/326 (100 %) | 1 diff (99.7 %id) | |||
AU145358 | whole embryo, mainly head | .t-u | 1020 to 1586 | 562 to 1 | tiling clone, | 562/568 (98 %) | 7 diff (98.8 %id) | ||
DA570360 | whole embryo, mainly head | .t-u | 1 to 780 | 2 to 782 | tiling clone, capped | 781/784 (99 %) | 8 diff (99.0 %id) | ||
BP241187 | Liver | .b | 2112 to 2663 | 1 to 552 | 552/552 (100 %) | 1 diff (99.9 %id) | |||
DA584719 | lung | .b | 54 to 638 | 2 to 586 | capped | 585/585 (100 %) | 0 diff (100 %id) | ||
BP250151 | hippocampus | .b | 894 to 1481 | 1 to 588 | 588/588 (100 %) | 2 diff (99.7 %id) | |||
R40286 | whole brain | .b | 4391 to 4727 | 362 to 12 | AAA | 351/351 (100 %) | 20 diff (94.4 %id) | ||
R20362 | whole brain | .b | 3157 to 3570 | 1 to 429 | 429/475 (90 %) | 24 diff (95.0 %id) | |||
H10716 | whole brain | .b | 3016 to 3429 | 1 to 419 | 419/431 (97 %) | 9 diff (98.0 %id) | |||
H10717 | whole brain | .b | 4353 to 4727 | 397 to 12 | AAA | 386/386 (100 %) | 13 diff (96.7 %id) | ||
T74804 | Liver | .b | 752 to 1118 | 1 to 372 | 372/410 (90 %) | 12 diff (97.1 %id) | |||
T85209 | liver and spleen | .b | 3847 to 4235 | 1 to 401 | 401/404 (99 %) | 13 diff (96.8 %id) | |||
T89167 | liver and spleen | .b | 4459 to 4726 | 268 to 1 | 268/268 (100 %) | 1 diff (99.7 %id) | |||
R09028 | liver and spleen | .b | 3215 to 3570 | 1 to 370 | 370/409 (90 %) | 17 diff (95.9 %id) | |||
N46327 | multiple sclerosis lesions | .b | 4375 to 4727 | 353 to 1 | 353/357 (98 %) | 0 diff (100 %id) | |||
N48834 | multiple sclerosis lesions | .b | 3243 to 3471 | 1 to 228 | 228/231 (98 %) | 6 diff (97.5 %id) | |||
N46331 | multiple sclerosis lesions | .b | 4375 to 4727 | 356 to 1 | 356/360 (98 %) | 6 diff (98.4 %id) | |||
N48837 | multiple sclerosis lesions | .b | 3254 to 3482 | 1 to 228 | 228/228 (100 %) | 2 diff (99.2 %id) | |||
N45006 | multiple sclerosis lesions | .s-u | 1604 to 1839 | 1 to 238 | tiling clone, | 238/238 (100 %) | 3 diff (98.8 %id) | ||
N63661. matches multiple genes | liver and spleen | .b | 4409 to 4727 | 347 to 25 | AAA | also hits gene warspubu | 323/325 (99 %) | 7 diff (97.9 %id) | |
N91065 | liver and spleen | .b | 3575 to 4054 | 1 to 479 | 479/479 (100 %) | 3 diff (99.4 %id) | |||
N69317 | liver and spleen | .a | 4106 to 4301 | 196 to 1 | 196/196 (100 %) | 2 diff (99.0 %id) | |||
N94140 | liver and spleen | .a | 3206 to 3647 | 9 to 451 | 443/451 (98 %) | 9 diff (98.1 %id) | |||
AA018284 | eye, retina | .s-u | 2304 to 2470 | 1 to 167 | 167/167 (100 %) | 0 diff (100 %id) | |||
AA190381 | .t-u | 2056 to 2481 | 1 to 432 | tiling clone, | 432/434 (99 %) | 7 diff (98.4 %id) | |||
AA160990 | .t-u | 659 to 1185 | 1 to 533 | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 533/533 (100 %) | 7 diff (98.7 %id) | |||
AA160991 | .t-u | 1898 to 2384 | 515 to 26 | Q18R G19R E20R R21E A22S ... | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 490/501 (97 %) | 6 diff (98.9 %id) | |
AA243371 | germinal center B cell | .e | 699 to 1100 | 402 to 1 | 402/402 (100 %) | 0 diff (100 %id) | |||
AA243554 | germinal center B cell | .e | 1 to 400 | 1 to 400 | tiling clone, | 400/400 (100 %) | 0 diff (100 %id) | ||
AA282528 | germinal center B cell | .b | 4350 to 4727 | 393 to 16 | AAA | 378/378 (100 %) | 0 diff (100 %id) | ||
AA282637 | germinal center B cell | .b | 3677 to 3979 | 1 to 302 | 302/302 (100 %) | 2 diff (99.4 %id) | |||
AA280719 | germinal center B cell | .g | 1 to 417 | 1 to 422 | tiling clone, | 346/422 (81 %) | 18 diff (95.8 %id) | ||
AA281472 | germinal center B cell | .g | 2497 to 2887 | 391 to 1 | tiling clone, | 391/391 (100 %) | 0 diff (100 %id) | ||
AA479066 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 4624 to 4729 | 107 to 1 | fully sequenced, | 107/107 (100 %) | 2 diff (98.2 %id) | ||
AA480040 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .b | 4375 to 4728 | 12 to 365 | fully sequenced, | 354/365 (96 %) | 6 diff (98.4 %id) | ||
AA446161 | .b | 4140 to 4677 | 1 to 537 | 537/537 (100 %) | 1 diff (99.9 %id) | ||||
AA454867 | ovarian tumor, ovary | .b | 4349 to 4727 | 391 to 13 | fully sequenced, AAA | 379/379 (100 %) | 0 diff (100 %id) | ||
AA455209 | ovarian tumor, ovary | .b | 3974 to 4379 | 1 to 406 | fully sequenced, | 406/406 (100 %) | 0 diff (100 %id) | ||
AA747091 | alveolar rhabdomyosarcoma | .b | 4360 to 4739 | 396 to 17 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 380/380 (100 %) | 2 diff (99.5 %id) | |
AA766068 | germinal center B cell | .e | 706 to 1108 | 404 to 2 | tiling clone, | 403/404 (99 %) | 0 diff (100 %id) | ||
AA948537 | pooled | .s-u | 2308 to 2608 | 303 to 3 | 301/303 (99 %) | 0 diff (100 %id) | |||
AA972806 | pooled | .b | 3597 to 3891 | 295 to 1 | 295/295 (100 %) | 0 diff (100 %id) | |||
AA985377 | schizophrenic brain S-11 frontal lobe | .b | 3527 to 3886 | 1 to 360 | Submitted on the opposite strand | 360/360 (100 %) | 1 diff (99.8 %id) | ||
AI025261 | .b | 4413 to 4736 | 326 to 3 | 324/326 (99 %) | 0 diff (100 %id) | ||||
AI024163 | .b | 4394 to 4728 | 340 to 6 | 335/340 (98 %) | 0 diff (100 %id) | ||||
AI025876 | parathyroid gland, parathyroid tumor | .b | 4331 to 4727 | 410 to 14 | AAA | 397/397 (100 %) | 0 diff (100 %id) | ||
AI041381 | parathyroid gland, parathyroid tumor | .b | 4378 to 4727 | 363 to 14 | AAA | 350/350 (100 %) | 1 diff (99.8 %id) | ||
AI090773 | heart | .t-u | 1907 to 2390 | 484 to 1 | exact | tiling clone, | 484/484 (100 %) | 1 diff (99.8 %id) | |
AI207383 | placenta | .b | 4307 to 4732 | 426 to 1 | 426/427 (99 %) | 0 diff (100 %id) | |||
AI215076 | pooled | .c | 2804 to 3255 | 452 to 1 | tiling clone, | 452/452 (100 %) | 0 diff (100 %id) | ||
AI221375 | pooled | .b | 4312 to 4728 | 419 to 3 | 417/419 (99 %) | 0 diff (100 %id) | |||
AI240230 | pooled | .b | 4415 to 4727 | 334 to 22 | AAA | 313/313 (100 %) | 2 diff (99.4 %id) | ||
AI373629 | Kidney | .b | 4337 to 4736 | 403 to 4 | 400/403 (99 %) | 0 diff (100 %id) | |||
AI267153 | brain, frontal lobe (see description) | .b | 832 to 1224 | 27 to 419 | 393/419 (93 %) | 6 diff (98.6 %id) | |||
AI382086 | pooled | .b | 4277 to 4728 | 454 to 3 | 452/454 (99 %) | 0 diff (100 %id) | |||
AI609653 | brain, tumor, 5 pooled (see description) | .t-u | 2112 to 2376 | 292 to 27 | AAA | 266/277 (96 %) | 0 diff (100 %id) | ||
AI824585 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .a | 4096 to 4312 | 229 to 13 | tiling clone, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 217/217 (100 %) | 2 diff (99.1 %id) | |
AI702127 | carcinoid, lung | .b | 4529 to 4692 | 1 to 164 | Submitted on the opposite strand | 164/164 (100 %) | 0 diff (100 %id) | ||
AI672743 | thymus, pooled | .e | 768 to 1137 | 547 to 180 | tiling clone, AAA | 368/520 (70 %) | 9 diff (98.3 %id) | ||
AI809070 | pooled | .a | 3731 to 4307 | 599 to 22 | AAA | Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) | 578/578 (100 %) | 16 diff (97.3 %id) | |
AI768700 | Kidney | .b | 4047 to 4489 | 494 to 50 | 445/494 (90 %) | 0 diff (100 %id) | |||
AI764971 | Kidney | .b | 4482 to 4727 | 268 to 23 | AAA | 246/246 (100 %) | 2 diff (99.2 %id) | ||
AI863533 | Kidney | .b | 1802 to 2396 | 594 to 1 | 594/594 (100 %) | 16 diff (97.4 %id) | |||
AI760950 | 2 pooled tumors (clear cell type), Kidney | .t-u | 2080 to 2389 | 311 to 2 | 310/311 (99 %) | 0 diff (100 %id) | |||
AI936225 | normal prostate, Prostate | .b | 4203 to 4728 | 527 to 3 | 525/531 (98 %) | 0 diff (100 %id) | |||
AI948899 | 2 pooled tumors (clear cell type), Kidney | .t-u | 2256 to 2386 | 133 to 3 | 131/133 (98 %) | 0 diff (100 %id) | |||
AI963214 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .u | 314 to 397 | 1 to 84 | Submitted on the opposite strand | 84/84 (100 %) | 0 diff (100 %id) | ||
AW078908 | 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney | .s-u | 2470 to 2867 | 398 to 1 | V37I | 398/398 (100 %) | 1 diff (99.8 %id) | ||
AW088780 | ovary, tumor, 5 pooled (see description) | .b | 4351 to 4728 | 382 to 3 | 380/382 (99 %) | 0 diff (100 %id) | |||
AW150185 | uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors | .s-u | 2134 to 2606 | 484 to 12 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 473/473 (100 %) | 2 diff (99.6 %id) | |
AW015005 | .t-u | 653 to 1120 | 1 to 468 | Submitted on the opposite strand | 468/468 (100 %) | 0 diff (100 %id) | |||
AW469729 | pooled | .b | 4312 to 4728 | 419 to 3 | 417/419 (99 %) | 0 diff (100 %id) | |||
AW769517 | 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney | .b | 4664 to 4815 | 171 to 20 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 152/152 (100 %) | 1 diff (99.4 %id) | |
BU429727 | lymph | .b | 919 to 1539 | 8 to 628 | 621/628 (98 %) | 6 diff (99.1 %id) | |||
BE221884 | carcinoid, lung | .b | 4283 to 4728 | 446 to 1 | 446/446 (100 %) | 0 diff (100 %id) | |||
BE222888 | brain, oligodendroglioma | .a | 3927 to 4293 | 224 to 591 | Submitted on the opposite strand | 368/591 (62 %) | 6 diff (99.0 %id) | ||
BE550174 | carcinoid, lung | .t-u | 659 to 1218 | 1 to 560 | tiling clone, | Submitted on the opposite strand | 560/560 (100 %) | 1 diff (99.9 %id) | |
BE670725 | carcinoid, lung | .t-u | 751 to 1076 | 1 to 328 | Submitted on the opposite strand | 328/328 (100 %) | 1 diff (99.7 %id) | ||
CB053000 | leiomyosarcoma, soft tissue | .s-u | 1814 to 2423 | 20 to 629 | 610/629 (96 %) | 6 diff (99.1 %id) | |||
BG150218 | carcinoid, lung | .b | 4525 to 4691 | 1 to 167 | Submitted on the opposite strand | 167/167 (100 %) | 0 diff (100 %id) | ||
BF594779 | Kidney | .a | 4047 to 4307 | 283 to 23 | AAA | Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) | 261/261 (100 %) | 0 diff (100 %id) | |
BE887976 | leiomyosarcoma, uterus | .j | 1 to 732 | 1 to 730 | R197E N198T K199R I200L A201H ... | tiling clone, | 730/885 (82 %) | 13 diff (98.6 %id) | |
BE972312 | testis | .b | 3748 to 4388 | 1 to 635 | 635/635 (100 %) | 23 diff (96.4 %id) | |||
BC012631 | Brain, glioblastoma | .c | 534 to 2620 | 1 to 2086 | tiling clone, available from MGC, AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 2086/2122 (98 %) | 6 diff (99.8 %id) | |
BF216160 | brain, glioblastoma | .c | 537 to 1138 | 1 to 606 | available from MGC, | 608/691 (87 %) | 29 diff (95.9 %id) | ||
BG431084 | Kidney | .b | 1013 to 1717 | 1 to 700 | 700/700 (100 %) | 11 diff (98.5 %id) | |||
BG502305 | embryonal carcinoma, testis | .b | 4134 to 4744 | 1 to 614 | 614/615 (99 %) | 5 diff (99.2 %id) | |||
BG533013 | embryonal carcinoma, testis | .d | 663 to 1249 | 1 to 596 | tiling clone, | 596/745 (80 %) | 13 diff (98.3 %id) | ||
BI770968 | pooled lung and spleen | .b | 2305 to 2954 | 1 to 650 | 650/651 (99 %) | 1 diff (99.9 %id) | |||
BI861400 | breast, mammary adenocarcinoma, cell line | .b | 3123 to 3770 | 110 to 766 | 657/766 (85 %) | 15 diff (98.1 %id) | |||
BI858702 | breast, mammary adenocarcinoma, cell line | .b | 2900 to 3746 | 1 to 844 | 842/844 (99 %) | 16 diff (98.2 %id) | |||
CK821542 | Pancreas, Purified pancreatic islet | .a | 3264 to 3852 | 1 to 589 | Submitted on the opposite strand | 589/589 (100 %) | 0 diff (100 %id) | ||
CK821543 | Pancreas, Purified pancreatic islet | .a | 3726 to 4307 | 592 to 11 | AAA | Submitted on the opposite strand | 582/582 (100 %) | 1 diff (99.9 %id) | |
BQ069231 | brain, neuroblastoma, cell line | .b | 2845 to 3749 | 8 to 919 | 912/1035 (88 %) | 15 diff (98.6 %id) | |||
BC039018 | Skin, melanotic melanoma. | .b | 249 to 2432 | 11 to 2194 | available from MGC, AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 2184/2186 (99 %) | 5 diff (99.8 %id) | |
BQ230089 | melanotic melanoma, skin | .b | 250 to 960 | 1 to 722 | available from MGC, | 722/820 (88 %) | 18 diff (97.9 %id) | ||
BQ429642 | testis | .b | 1317 to 2088 | 1 to 775 | 775/775 (100 %) | 5 diff (99.4 %id) | |||
BQ428992 | testis | .b | 700 to 1375 | 1 to 682 | 682/766 (89 %) | 14 diff (98.2 %id) | |||
CA771156 | Pancreas, Purified pancreatic islet | .b | 5028 to 5532 | 505 to 1 | fully sequenced, | 505/505 (100 %) | 1 diff (99.9 %id) | ||
CA771463 | Pancreas, Purified pancreatic islet | .b | 4567 to 5058 | 1 to 492 | fully sequenced, | 492/492 (100 %) | 4 diff (99.2 %id) | ||
BU155177 | melanotic melanoma, skin | .b | 2050 to 2844 | 20 to 814 | 795/853 (93 %) | 13 diff (98.5 %id) | |||
CA778363 | Pancreas, Purified pancreatic islet | .u | 1 to 849 | 1 to 850 | exact | tiling clone, | 850/850 (100 %) | 4 diff (99.6 %id) | |
CA841193 | Pancreas, Purified pancreatic islet | .b | 4118 to 4635 | 1 to 518 | 518/518 (100 %) | 0 diff (100 %id) | |||
BC056674 | testis | .b | 232 to 1884 | 5 to 1657 | available from MGC, AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 1653/1666 (99 %) | 6 diff (99.7 %id) | |
BU852338 | testis | .b | 229 to 984 | 1 to 779 | available from MGC, | 779/830 (93 %) | 26 diff (96.9 %id) | ||
BU959491 | mixed (pool of 40 RNAs) | .s-u | 1619 to 2332 | 1 to 724 | tiling clone, | 724/769 (94 %) | 18 diff (97.7 %id) | ||
CX873529 | embryonic stem | .i | 305 to 1106 | 1 to 802 | tiling clone, | 802/802 (100 %) | 2 diff (99.8 %id) | ||
CX754203 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .b | 2015 to 2804 | 1 to 785 | Submitted on the opposite strand | 785/786 (99 %) | 14 diff (98.3 %id) | ||
DR157604 | human embryonic stem cells differentiated toan early endodermal cell type | .j | 649 to 1393 | 1 to 745 | tiling clone, | 745/745 (100 %) | 1 diff (99.9 %id) | ||
CD107566 | brain, Pituitary | .b | 3419 to 4165 | 1 to 761 | 761/929 (81 %) | 25 diff (97.4 %id) | |||
CD251959 | testis | .b | 1492 to 2183 | 171 to 871 | 701/931 (75 %) | 39 diff (95.9 %id) | |||
CD300234 | testis | .b | 248 to 1097 | 1 to 851 | 851/851 (100 %) | 3 diff (99.7 %id) | |||
CF456633 | peripheral nervous system | .b | 3389 to 4207 | 29 to 839 | 811/959 (84 %) | 25 diff (97.4 %id) | |||
TI_57179629 | .b | 2302 to 2954 | 58 to 710 | 653/711 (91 %) | 7 diff (99.1 %id) | ||||
TI_57189324 | .b | 3123 to 3770 | 166 to 822 | 657/766 (85 %) | 15 diff (98.1 %id) | ||||
TI_57191452 | .b | 2900 to 3746 | 63 to 906 | 842/844 (99 %) | 16 diff (98.2 %id) | ||||
BP274890 | Kidney | .b | 1911 to 2494 | 1 to 584 | 584/584 (100 %) | 1 diff (99.9 %id) | |||
BP277093 | Kidney | .b | 2156 to 2737 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
DA621573 | Kidney | .p | 1 to 529 | 2 to 530 | exact | tiling clone, capped | 529/529 (100 %) | 0 diff (100 %id) | |
DC428298 | .c | 161 to 756 | 1 to 597 | 597/597 (100 %) | 4 diff (99.4 %id) | ||||
DA662030 | .c | 177 to 704 | 2 to 529 | capped | 528/528 (100 %) | 1 diff (99.9 %id) | |||
AU280624 | .b | 2424 to 2997 | 1 to 574 | 574/574 (100 %) | 0 diff (100 %id) | ||||
NM_014648.3 | .b | 1 to 5540 | 2 to 5541 | exact | RefSeq, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 5541/5541 (100 %) | 1 diff (100.0 %id) | |
DA687751 | .b | 3229 to 3767 | 2 to 540 | capped | 539/539 (100 %) | 1 diff (99.9 %id) | |||
DA692017 | .b | 523 to 1087 | 2 to 566 | capped | 565/565 (100 %) | 0 diff (100 %id) | |||
DA693373 | .b | 233 to 807 | 2 to 577 | capped | 576/576 (100 %) | 1 diff (99.9 %id) | |||
DA705295 | .b | 2422 to 2934 | 3 to 515 | capped | 513/514 (99 %) | 0 diff (100 %id) | |||
DA713607 | .b | 233 to 773 | 2 to 542 | capped | 541/542 (99 %) | 1 diff (99.9 %id) | |||
DA724266 | .b | 1310 to 1864 | 2 to 556 | capped | 555/555 (100 %) | 0 diff (100 %id) | |||
AU131065 | .b | 233 to 1117 | 2 to 882 | capped | 881/889 (99 %) | 4 diff (99.6 %id) | |||
AU152898 | .b | 4169 to 4727 | 555 to 1 | 555/558 (99 %) | 15 diff (97.4 %id) | ||||
DA746361 | .a | 1 to 567 | 2 to 568 | capped | 567/567 (100 %) | 1 diff (99.9 %id) | |||
DA776396 | brain | .b | 190 to 679 | 2 to 491 | capped | 490/497 (98 %) | 4 diff (99.2 %id) | ||
DA795964 | brain | .b | 1561 to 2055 | 8 to 502 | capped | 495/501 (98 %) | 6 diff (98.9 %id) | ||
AU134341 | ovary, tumor tissue | .b | 192 to 878 | 2 to 688 | capped | 687/698 (98 %) | 1 diff (99.9 %id) | ||
AU155367 | ovary, tumor tissue | .b | 1868 to 2392 | 529 to 1 | 529/531 (99 %) | 7 diff (98.7 %id) | |||
DA864677 | placenta | .o-u | 49 to 615 | 2 to 569 | exact | tiling clone, capped | 568/568 (100 %) | 1 diff (99.9 %id) | |
BM832615 | stomach | .b | 275 to 553 | 1 to 279 | 279/279 (100 %) | 2 diff (99.3 %id) | |||
BM839922 | myeloma | .b | 3933 to 4474 | 1 to 542 | 542/542 (100 %) | 1 diff (99.9 %id) | |||
BM848423 | myeloma | .b | 3933 to 4466 | 1 to 534 | 534/534 (100 %) | 0 diff (100 %id) | |||
TI_1948232026 | .b | 420 to 1238 | 125 to 943 | 819/1412 (58 %) | 15 diff (99.0 %id) | ||||
TI_1948232027 | .b | 417 to 1117 | 125 to 826 | 702/1235 (56 %) | 19 diff (98.5 %id) | ||||
TI_1948232028 | .b | 3371 to 4047 | 736 to 60 | 677/1086 (62 %) | 27 diff (97.6 %id) | ||||
TI_1948232029 | .b | 3055 to 4047 | 1121 to 129 | 993/1179 (84 %) | 18 diff (98.5 %id) | ||||
TI_1948232330 | .b | 417 to 1345 | 126 to 1050 | 923/1427 (64 %) | 20 diff (98.6 %id) | ||||
TI_1948232331 | .b | 420 to 999 | 131 to 714 | 584/1253 (46 %) | 19 diff (98.5 %id) | ||||
TI_1948232332 | .b | 3430 to 4047 | 772 to 145 | 628/1269 (49 %) | 27 diff (97.9 %id) | ||||
TI_1948232333 | .b | 3059 to 4047 | 1105 to 123 | 983/1217 (80 %) | 22 diff (98.2 %id) | ||||
TI_1948232630 | .b | 420 to 1337 | 124 to 1037 | 914/1406 (65 %) | 20 diff (98.6 %id) | ||||
TI_1948232631 | .b | 420 to 1120 | 127 to 830 | 704/1286 (54 %) | 17 diff (98.7 %id) | ||||
TI_1948232632 | .b | 3308 to 4047 | 835 to 93 | 741/1151 (64 %) | 14 diff (98.8 %id) | ||||
TI_1948232633 | .b | 3009 to 4047 | 1163 to 125 | 1039/1207 (86 %) | 42 diff (96.6 %id) | ||||
TI_1948232920 | .b | 417 to 1344 | 126 to 1056 | 931/1505 (61 %) | 33 diff (97.9 %id) | ||||
TI_1948232921 | .b | 3481 to 4047 | 716 to 147 | 570/1307 (43 %) | 7 diff (99.5 %id) | ||||
TI_1948232922 | .b | 3113 to 4047 | 1062 to 124 | 939/1255 (74 %) | 21 diff (98.4 %id) | ||||
T31481 | colon, embryo | .b | 4406 to 4840 | 1 to 434 | 434/434 (100 %) | 12 diff (97.3 %id) | |||
DR005093 | Prostate | .c | 445 to 987 | 8 to 550 | 543/550 (98 %) | 6 diff (99.0 %id) | |||
DB032085 | testis | .i | 1 to 536 | 2 to 537 | tiling clone, capped | 536/536 (100 %) | 0 diff (100 %id) | ||
DB037468 | testis | .b | 224 to 793 | 2 to 571 | capped | 570/570 (100 %) | 0 diff (100 %id) | ||
DB037684 | testis | .b | 2725 to 3304 | 2 to 581 | capped | 580/581 (99 %) | 0 diff (100 %id) | ||
DB054465 | testis | .i | 99 to 664 | 2 to 568 | capped | 567/567 (100 %) | 1 diff (99.9 %id) | ||
DB063690 | testis | .b | 1131 to 1535 | 2 to 405 | capped | 404/404 (100 %) | 3 diff (99.3 %id) | ||
DB065212 | testis | .b | 214 to 747 | 2 to 535 | capped | 534/534 (100 %) | 0 diff (100 %id) | ||
DB066074 | testis | .b | 194 to 745 | 2 to 554 | capped | 553/553 (100 %) | 2 diff (99.7 %id) | ||
DB069930 | testis | .b | 214 to 751 | 2 to 540 | capped | 539/539 (100 %) | 1 diff (99.9 %id) | ||
DB073834 | testis | .b | 214 to 766 | 2 to 555 | capped | 554/554 (100 %) | 1 diff (99.9 %id) | ||
DB075122 | testis | .f | 2128 to 2674 | 2 to 548 | capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
DB340501 | testis | .f | 4629 to 5164 | 536 to 1 | 536/536 (100 %) | 1 diff (99.9 %id) | |||
DB075665 | testis | .b | 1557 to 2115 | 2 to 561 | capped | 560/560 (100 %) | 6 diff (99.0 %id) | ||
DB079788 | testis | .b | 2768 to 3232 | 2 to 466 | capped | 465/465 (100 %) | 0 diff (100 %id) | ||
DB082776 | testis | .b | 1658 to 2209 | 2 to 554 | capped | 553/553 (100 %) | 2 diff (99.7 %id) | ||
DB091055 | testis | .s-u | 1 to 521 | 2 to 522 | tiling clone, to resequence, capped | 521/521 (100 %) | 3 diff (99.5 %id) | ||
DB341419 | testis | .s-u | 3134 to 3667 | 535 to 1 | tiling clone, to resequence, | 535/535 (100 %) | 2 diff (99.7 %id) | ||
DB094879 | testis | .b | 214 to 765 | 2 to 553 | capped | 552/552 (100 %) | 0 diff (100 %id) | ||
DB096283 | testis | .b | 218 to 761 | 2 to 546 | capped | 545/545 (100 %) | 2 diff (99.7 %id) | ||
DB100225 | testis | .b | 1158 to 1741 | 2 to 586 | capped | 585/585 (100 %) | 2 diff (99.7 %id) | ||
DB100268 | testis | .b | 1212 to 1796 | 2 to 586 | capped | 585/585 (100 %) | 0 diff (100 %id) | ||
BP362692 | thalamus | .b | 255 to 835 | 1 to 582 | 582/582 (100 %) | 1 diff (99.9 %id) | |||
DB132249 | thymus | .b | 241 to 770 | 2 to 531 | capped | 530/530 (100 %) | 0 diff (100 %id) | ||
DB136679 | thymus | .b | 2062 to 2608 | 2 to 548 | capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
TI_149274538 | .b | 3938 to 4727 | 873 to 92 | AAA | 782/967 (80 %) | 13 diff (98.7 %id) | |||
TI_149286921 | .b | 3848 to 4727 | 953 to 79 | AAA | 875/1111 (78 %) | 23 diff (98.0 %id) | |||
TI_154094850 | .va-u | 1 to 545 | 639 to 96 | exact | tiling clone, | 544/1046 (52 %) | 0 diff (100 %id) | ||
TI_154150833 | .b | 919 to 1684 | 80 to 844 | 765/765 (100 %) | 3 diff (99.7 %id) | ||||
DC414649 | trachea | .b | 1797 to 2401 | 1 to 605 | 605/605 (100 %) | 1 diff (99.9 %id) | |||
DB213506 | trachea | .h | 320 to 865 | 2 to 548 | tiling clone, capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
DC415811 | trachea | .h | 1 to 542 | 1 to 542 | tiling clone, | 542/542 (100 %) | 2 diff (99.7 %id) | ||
DB222952 | trachea | .a | 35 to 610 | 2 to 577 | capped | 576/576 (100 %) | 1 diff (99.9 %id) | ||
DB228744 | trachea | .b | 1662 to 2254 | 2 to 594 | capped | 593/593 (100 %) | 0 diff (100 %id) | ||
DB231358 | trachea | .b | 1662 to 2237 | 2 to 577 | capped | 576/576 (100 %) | 0 diff (100 %id) | ||
CF528805 | placenta | .b | 4457 to 4735 | 296 to 18 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 279/279 (100 %) | 4 diff (98.6 %id) | |
BU676195 | lung, Primary Lung Epithelial Cells | .b | 4017 to 4727 | 729 to 19 | AAA | 711/711 (100 %) | 2 diff (99.8 %id) | ||
BU678657 | lung, Primary Lung Epithelial Cells | .t-u | 648 to 1209 | 1 to 564 | Submitted on the opposite strand | 564/564 (100 %) | 8 diff (98.6 %id) | ||
BM972257 | lung | .b | 4083 to 4727 | 664 to 19 | AAA | 646/646 (100 %) | 1 diff (99.9 %id) | ||
CA311635 | Human Lung Epithelial cells, lung | .b | 2632 to 3251 | 19 to 638 | Submitted on the opposite strand | 620/635 (97 %) | 5 diff (99.3 %id) | ||
BM702772 | eye, Retina Foveal and Macular | .b | 4103 to 4570 | 1 to 468 | fully sequenced, | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 468/468 (100 %) | 0 diff (100 %id) | |
BU729821 | eye, Retina Foveal and Macular | .b | 4540 to 4815 | 292 to 17 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 276/276 (100 %) | 0 diff (100 %id) | |
BM697300 | eye, lens | .b | 3691 to 4239 | 1 to 549 | 549/549 (100 %) | 0 diff (100 %id) | |||
BM698594 | eye, fetal eyes | .b | 1794 to 2358 | 1 to 565 | 565/565 (100 %) | 0 diff (100 %id) | |||
BU624539 | cell lines, Enchondroma | .b | 4077 to 4727 | 670 to 19 | AAA | 652/652 (100 %) | 1 diff (99.9 %id) | ||
TI_151708685 | .b | 4111 to 4727 | 776 to 158 | AAA | 619/948 (65 %) | 0 diff (100 %id) | |||
TI_151711186 | .b | 1890 to 2412 | 621 to 95 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 527/1349 (39 %) | 4 diff (99.8 %id) | ||
DB281011 | uterus | .a | 66 to 630 | 2 to 566 | capped | 565/565 (100 %) | 0 diff (100 %id) | ||
BP383578 | .b | 736 to 1234 | 1 to 499 | 499/499 (100 %) | 7 diff (98.6 %id) | ||||
Z20133 | .b | 4098 to 4427 | 1 to 326 | 326/349 (93 %) | 9 diff (97.5 %id) | ||||
Z20134 | .b | 4333 to 4655 | 324 to 1 | 324/324 (100 %) | 3 diff (99.1 %id) | ||||
Z21302 | .b | 4064 to 4339 | 1 to 274 | 274/274 (100 %) | 2 diff (99.3 %id) | ||||
Z21303 | .b | 4422 to 4664 | 242 to 1 | 242/242 (100 %) | 3 diff (98.8 %id) | ||||
AK294967 | brain | .b | 4406 to 4840 | 1 to 434 | Suspected internal deletion, this clone was ignored | 434/434 (100 %) | 12 diff (97.3 %id) | ||
AK297451 | brain | .b | 4406 to 4840 | 1 to 434 | Suspected internal deletion, this clone was ignored | 434/434 (100 %) | 12 diff (97.3 %id) | ||
AK303942 | trachea | .c | 445 to 987 | 8 to 550 | Suspected internal deletion, this clone was ignored | 543/550 (98 %) | 6 diff (99.0 %id) | ||
DC323167 | brain | .i | 1 to 536 | 2 to 537 | tiling clone, | Suspected internal deletion, this clone was ignored | 536/536 (100 %) | 0 diff (100 %id) | |
DC352015 | brain | .b | 224 to 793 | 2 to 571 | This clone was ignored | 570/570 (100 %) | 0 diff (100 %id) | ||
AA452557 | .b | 2725 to 3304 | 2 to 581 | Suspected internal deletion, this clone was ignored | 580/581 (99 %) | 0 diff (100 %id) | |||
AA452740 | .i | 99 to 664 | 2 to 568 | Suspected internal deletion, this clone was ignored | 567/567 (100 %) | 1 diff (99.9 %id) | |||
BQ722431 | sympathetic trunk | .b | 1131 to 1535 | 2 to 405 | This clone was ignored | 404/404 (100 %) | 3 diff (99.3 %id) | ||
DB223318 | trachea | .b | 214 to 747 | 2 to 535 | capped | Suspected internal deletion, this clone was ignored | 534/534 (100 %) | 0 diff (100 %id) | |
DB066074 | testis | .b | 194 to 745 | 2 to 554 | capped | 553/553 (100 %) | 2 diff (99.7 %id) | ||
DB069930 | testis | .b | 214 to 751 | 2 to 540 | capped | 539/539 (100 %) | 1 diff (99.9 %id) | ||
DB073834 | testis | .b | 214 to 766 | 2 to 555 | capped | 554/554 (100 %) | 1 diff (99.9 %id) | ||
DB075122 | testis | .f | 2128 to 2674 | 2 to 548 | capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
DB340501 | testis | .f | 4629 to 5164 | 536 to 1 | 536/536 (100 %) | 1 diff (99.9 %id) | |||
DB075665 | testis | .b | 1557 to 2115 | 2 to 561 | capped | 560/560 (100 %) | 6 diff (99.0 %id) | ||
DB079788 | testis | .b | 2768 to 3232 | 2 to 466 | capped | 465/465 (100 %) | 0 diff (100 %id) | ||
DB082776 | testis | .b | 1658 to 2209 | 2 to 554 | capped | 553/553 (100 %) | 2 diff (99.7 %id) | ||
DB091055 | testis | .s-u | 1 to 521 | 2 to 522 | tiling clone, to resequence, capped | 521/521 (100 %) | 3 diff (99.5 %id) | ||
DB341419 | testis | .s-u | 3134 to 3667 | 535 to 1 | tiling clone, to resequence, | 535/535 (100 %) | 2 diff (99.7 %id) | ||
DB094879 | testis | .b | 214 to 765 | 2 to 553 | capped | 552/552 (100 %) | 0 diff (100 %id) | ||
DB096283 | testis | .b | 218 to 761 | 2 to 546 | capped | 545/545 (100 %) | 2 diff (99.7 %id) | ||
DB100225 | testis | .b | 1158 to 1741 | 2 to 586 | capped | 585/585 (100 %) | 2 diff (99.7 %id) | ||
DB100268 | testis | .b | 1212 to 1796 | 2 to 586 | capped | 585/585 (100 %) | 0 diff (100 %id) | ||
BP362692 | thalamus | .b | 255 to 835 | 1 to 582 | 582/582 (100 %) | 1 diff (99.9 %id) | |||
DB132249 | thymus | .b | 241 to 770 | 2 to 531 | capped | 530/530 (100 %) | 0 diff (100 %id) | ||
DB136679 | thymus | .b | 2062 to 2608 | 2 to 548 | capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
TI_149274538 | .b | 3938 to 4727 | 873 to 92 | AAA | 782/967 (80 %) | 13 diff (98.7 %id) | |||
TI_149286921 | .b | 3848 to 4727 | 953 to 79 | AAA | 875/1111 (78 %) | 23 diff (98.0 %id) | |||
TI_154094850 | .va-u | 1 to 545 | 639 to 96 | exact | tiling clone, | 544/1046 (52 %) | 0 diff (100 %id) | ||
TI_154150833 | .b | 919 to 1684 | 80 to 844 | 765/765 (100 %) | 3 diff (99.7 %id) | ||||
DC414649 | trachea | .b | 1797 to 2401 | 1 to 605 | 605/605 (100 %) | 1 diff (99.9 %id) | |||
DB213506 | trachea | .h | 320 to 865 | 2 to 548 | tiling clone, capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
DC415811 | trachea | .h | 1 to 542 | 1 to 542 | tiling clone, | 542/542 (100 %) | 2 diff (99.7 %id) | ||
DB222952 | trachea | .a | 35 to 610 | 2 to 577 | capped | 576/576 (100 %) | 1 diff (99.9 %id) | ||
DB228744 | trachea | .b | 1662 to 2254 | 2 to 594 | capped | 593/593 (100 %) | 0 diff (100 %id) | ||
DB231358 | trachea | .b | 1662 to 2237 | 2 to 577 | capped | 576/576 (100 %) | 0 diff (100 %id) | ||
CF528805 | placenta | .b | 4457 to 4735 | 296 to 18 | AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 279/279 (100 %) | 4 diff (98.6 %id) | |
BU676195 | lung, Primary Lung Epithelial Cells | .b | 4017 to 4727 | 729 to 19 | AAA | 711/711 (100 %) | 2 diff (99.8 %id) | ||
BU676195 | lung, Primary Lung Epithelial Cells | .b | 4017 to 4727 | 729 to 19 | AAA | 711/711 (100 %) | 2 diff (99.8 %id) | ||
BU678657 | lung, Primary Lung Epithelial Cells | .t-u | 648 to 1209 | 1 to 564 | Submitted on the opposite strand | 564/564 (100 %) | 8 diff (98.6 %id) | ||
BU678657 | lung, Primary Lung Epithelial Cells | .t-u | 648 to 1209 | 1 to 564 | Submitted on the opposite strand | 564/564 (100 %) | 8 diff (98.6 %id) | ||
BM972257 | lung | .b | 4083 to 4727 | 664 to 19 | AAA | 646/646 (100 %) | 1 diff (99.9 %id) | ||
CA311635 | Human Lung Epithelial cells, lung | .b | 2632 to 3251 | 19 to 638 | Submitted on the opposite strand | 620/635 (97 %) | 5 diff (99.3 %id) | ||
CA311635 | Human Lung Epithelial cells, lung | .b | 2632 to 3251 | 19 to 638 | Submitted on the opposite strand | 620/635 (97 %) | 5 diff (99.3 %id) | ||
BM702772 | eye, Retina Foveal and Macular | .b | 4103 to 4570 | 1 to 468 | fully sequenced, | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 468/468 (100 %) | 0 diff (100 %id) | |
BM702772 | eye, Retina Foveal and Macular | .b | 4103 to 4570 | 1 to 468 | fully sequenced, | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 468/468 (100 %) | 0 diff (100 %id) | |
BU729821 | eye, Retina Foveal and Macular | .b | 4540 to 4815 | 292 to 17 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 276/276 (100 %) | 0 diff (100 %id) | |
BU729821 | eye, Retina Foveal and Macular | .b | 4540 to 4815 | 292 to 17 | fully sequenced, AAA | Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) | 276/276 (100 %) | 0 diff (100 %id) | |
BM697300 | eye, lens | .b | 3691 to 4239 | 1 to 549 | 549/549 (100 %) | 0 diff (100 %id) | |||
BM697300 | eye, lens | .b | 3691 to 4239 | 1 to 549 | 549/549 (100 %) | 0 diff (100 %id) | |||
BM698594 | eye, fetal eyes | .b | 1794 to 2358 | 1 to 565 | 565/565 (100 %) | 0 diff (100 %id) | |||
BM698594 | eye, fetal eyes | .b | 1794 to 2358 | 1 to 565 | 565/565 (100 %) | 0 diff (100 %id) | |||
BU624539 | cell lines, Enchondroma | .b | 4077 to 4727 | 670 to 19 | AAA | 652/652 (100 %) | 1 diff (99.9 %id) | ||
BU624539 | cell lines, Enchondroma | .b | 4077 to 4727 | 670 to 19 | AAA | 652/652 (100 %) | 1 diff (99.9 %id) | ||
TI_151708685 | .b | 4111 to 4727 | 776 to 158 | AAA | 619/948 (65 %) | 0 diff (100 %id) | |||
TI_151711186 | .b | 1890 to 2412 | 621 to 95 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 527/1349 (39 %) | 4 diff (99.8 %id) | ||
DB281011 | uterus | .a | 66 to 630 | 2 to 566 | capped | 565/565 (100 %) | 0 diff (100 %id) | ||
BP383578 | .b | 736 to 1234 | 1 to 499 | 499/499 (100 %) | 7 diff (98.6 %id) | ||||
Z20133 | .b | 4098 to 4427 | 1 to 326 | 326/349 (93 %) | 9 diff (97.5 %id) | ||||
Z20134 | .b | 4333 to 4655 | 324 to 1 | 324/324 (100 %) | 3 diff (99.1 %id) | ||||
Z21302 | .b | 4064 to 4339 | 1 to 274 | 274/274 (100 %) | 2 diff (99.3 %id) | ||||
Z21303 | .b | 4422 to 4664 | 242 to 1 | 242/242 (100 %) | 3 diff (98.8 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p, .q, .r, .s-u, .t-u, .u, .va-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes CI |