To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene DTNBTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
297 supporting clones for gene DTNB back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_021907.3   .a 1 to 2472 1 to 2472 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2472/2472
(100 %)
0 diff
(100 %id)
AL538124 brain, fetal brain .a 89 to 1097 1 to 1001   tiling clone,   1001/1001
(100 %)
64 diff
(93.7 %id)
AF022728   .a 90 to 2472 1 to 2383 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2383/2383
(100 %)
0 diff
(100 %id)
Y15722 skeletal muscle .a 251 to 2472 1 to 2222 exact AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2222/2222
(100 %)
0 diff
(100 %id)
AA159436 Pancreas .a 976 to 1067 1 to 89       89/89
(100 %)
6 diff
(93.3 %id)
AL567154 brain, fetal brain .a 1508 to 2444 938 to 1       938/938
(100 %)
12 diff
(98.8 %id)
BE673691 carcinoid, lung .a 1820 to 2474 654 to 3       652/666
(97 %)
11 diff
(98.4 %id)
BM970702 lung .a 1824 to 2472 666 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 648/650
(99 %)
3 diff
(99.6 %id)
AW299868 Kidney .a 1841 to 2450 611 to 1       611/611
(100 %)
4 diff
(99.4 %id)
AI807034 pooled .a 1847 to 2469 649 to 27   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 623/623
(100 %)
19 diff
(97.0 %id)
BF679795 Prostate .a 1878 to 2476 1 to 605       605/773
(78 %)
13 diff
(98.4 %id)
BF062490 colon, colon tumor, RER+ .a 1952 to 2469 532 to 15   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 518/518
(100 %)
0 diff
(100 %id)
DB536089 hippocampus .a 2016 to 2469 1 to 455     Submitted on the opposite strand 455/455
(100 %)
7 diff
(98.5 %id)
AA159359 Pancreas .a 2030 to 2472 446 to 1       446/447
(99 %)
9 diff
(98.0 %id)
BX105922 whole brain .a 2035 to 2472 452 to 15   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 438/438
(100 %)
0 diff
(100 %id)
EC455253 Prostate .a 2052 to 2148 1 to 97       97/97
(100 %)
0 diff
(100 %id)
EC539172 Prostate .a 2053 to 2148 1 to 96       96/96
(100 %)
0 diff
(100 %id)
AK300019   .b 1 to 2050 1 to 2050 E604D tiling clone,   2050/2050
(100 %)
3 diff
(99.9 %id)
DB460644 testis .c 1 to 479 1 to 479   tiling clone,   479/479
(100 %)
0 diff
(100 %id)
BG702733 brain, hippocampus .c 9 to 836 5 to 843       835/878
(95 %)
29 diff
(96.7 %id)
BC049366 Brain, hippocampus .c 10 to 2409 1 to 2400 P97H I116T tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2400/2400
(100 %)
5 diff
(99.8 %id)
NM_183360.1   .c 14 to 2431 1 to 2418 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2418/2418
(100 %)
0 diff
(100 %id)
CX872843 embryonic stem .c 47 to 809 1 to 763   tiling clone,   763/763
(100 %)
0 diff
(100 %id)
DA728632   .c 85 to 768 2 to 688   capped   687/731
(93 %)
8 diff
(99.0 %id)
BM784399 stomach .c 758 to 1461 1 to 704       704/704
(100 %)
0 diff
(100 %id)
BU154807 melanotic melanoma, skin .c 783 to 1709 1 to 927       927/927
(100 %)
8 diff
(99.2 %id)
CX758633 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 848 to 1568 1 to 715     Submitted on the opposite strand 718/840
(85 %)
17 diff
(98.0 %id)
DB212847 trachea .c 889 to 1428 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
CN369227 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 963 to 1440 6 to 483       478/483
(98 %)
0 diff
(100 %id)
BE775015 uterus .c 1001 to 1412 1 to 412       412/412
(100 %)
2 diff
(99.6 %id)
H42097 breast .c 1106 to 1477 17 to 394       378/452
(83 %)
8 diff
(98.3 %id)
BQ056742 lymph, lymphoma, cell line .c 1139 to 1604 487 to 952       467/1013
(46 %)
19 diff
(98.2 %id)
CX868227 embryonic stem .c 1190 to 1947 1 to 758   fully sequenced, Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 758/758
(100 %)
6 diff
(99.3 %id)
BM823715 Ascites, stomach .c 1232 to 1743 4 to 513       510/513
(99 %)
8 diff
(98.5 %id)
Y15720 skeletal muscle .c 1342 to 1431 1 to 90       90/90
(100 %)
0 diff
(100 %id)
AA372099 parathyroid gland .c 1345 to 1623 1 to 279       279/279
(100 %)
1 diff
(99.7 %id)
DB353672   .c 1919 to 2428 506 to 1       506/564
(89 %)
9 diff
(98.5 %id)
CX868138 embryonic stem .c 1927 to 2431 530 to 26   fully sequenced, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 505/505
(100 %)
1 diff
(99.9 %id)
BF760201 colon .c 1936 to 2081 151 to 3     Submitted on the opposite strand 149/154
(96 %)
5 diff
(96.8 %id)
Y15719 skeletal muscle .c 1999 to 2088 1 to 90       90/90
(100 %)
0 diff
(100 %id)
H42052 breast .c 2146 to 2371 228 to 1       228/228
(100 %)
2 diff
(99.2 %id)
AL527400 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 1 to 911 1 to 928   tiling clone,   926/928
(99 %)
25 diff
(97.4 %id)
DQ160290   .d 36 to 1844 1 to 1809 exact tiling clone,   1809/1809
(100 %)
0 diff
(100 %id)
AL527359 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 1116 to 2155 1038 to 1   tiling clone,   1038/1038
(100 %)
8 diff
(99.3 %id)
NM_033147.2   .e 1 to 2382 1 to 2382 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2382/2382
(100 %)
0 diff
(100 %id)
AF070567 brain .e 846 to 2382 1 to 1537   tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 1537/1537
(100 %)
1 diff
(100.0 %id)
CR619470 HeLa cells Cot 25-normalized .f 1 to 2275 1 to 2275 exact tiling clone,   2275/2275
(100 %)
0 diff
(100 %id)
AL578230 placenta .f 1315 to 2275 963 to 1       963/963
(100 %)
6 diff
(99.4 %id)
TI_149289000   .f 1501 to 2288 882 to 104   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 779/797
(97 %)
13 diff
(98.4 %id)
AI654378 ovary, tumor, 5 pooled (see description) .f 1561 to 2288 727 to 1   tiling clone,   727/727
(100 %)
19 diff
(97.4 %id)
AL524324 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .g 1 to 1082 1 to 1066   tiling clone,   1066/1072
(99 %)
31 diff
(97.2 %id)
BX333707 Neuroblastoma Cot 25-normalized .g 52 to 1109 1 to 1055   tiling clone,   1055/1055
(100 %)
20 diff
(98.2 %id)
AL562339 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .g 1312 to 2267 957 to 1   tiling clone,   957/957
(100 %)
1 diff
(99.9 %id)
BX329754 Neuroblastoma Cot 25-normalized .g 1599 to 2286 685 to 1   tiling clone,   685/685
(100 %)
8 diff
(98.9 %id)
NM_033148.2   .h 1 to 2292 1 to 2292 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2292/2292
(100 %)
0 diff
(100 %id)
Y12712 brain .h 86 to 2292 19 to 2225 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2207/2225
(99 %)
6 diff
(99.8 %id)
NM_183361.1   .i 1 to 2271 1 to 2271 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2271/2271
(100 %)
0 diff
(100 %id)
BQ651659 hepatocellular carcinoma, cell line, Liver .i 52 to 970 1 to 923   tiling clone,   923/932
(99 %)
13 diff
(98.7 %id)
CF594188 Human Placenta, placenta .i 56 to 695 28 to 668       641/874
(73 %)
12 diff
(98.7 %id)
DB480441 hippocampus .i 66 to 348 1 to 283       283/285
(99 %)
10 diff
(96.5 %id)
BI550536 brain, hippocampus .i 66 to 125 1 to 60       60/60
(100 %)
2 diff
(96.7 %id)
CN369229 embryonic stem cells, DMSO-treated H9 cellline .i 67 to 398 1 to 332       332/332
(100 %)
3 diff
(99.1 %id)
TI_44172105   .i 67 to 810 81 to 824       744/827
(89 %)
10 diff
(98.8 %id)
DC363417   .i 69 to 542 1 to 475       475/475
(100 %)
3 diff
(99.4 %id)
DA397204 thalamus .i 70 to 646 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA137026 alzheimer cortex .i 72 to 616 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA144035 amygdala .i 72 to 557 2 to 487   capped   486/486
(100 %)
0 diff
(100 %id)
DA166132 amygdala .i 72 to 636 2 to 567   capped   566/567
(99 %)
2 diff
(99.7 %id)
DA301043 hippocampus .i 72 to 614 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA584066 lung .i 72 to 666 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA802046 brain .i 72 to 536 2 to 466   capped   465/465
(100 %)
0 diff
(100 %id)
DA879019 Prostate .i 72 to 638 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA920586 small intestine .i 72 to 628 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB196391 trachea .i 72 to 538 2 to 468   capped   467/467
(100 %)
0 diff
(100 %id)
AL555818 placenta .i 74 to 984 1 to 911       911/911
(100 %)
4 diff
(99.6 %id)
BG700652 brain, hippocampus .i 75 to 857 1 to 783       783/791
(98 %)
11 diff
(98.7 %id)
BX440095 brain, fetal brain .i 79 to 1125 1 to 1041       1041/1041
(100 %)
12 diff
(98.9 %id)
DB468687 hippocampus .i 80 to 516 1 to 437       437/437
(100 %)
7 diff
(98.4 %id)
DA086726 cerebellum .i 81 to 628 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA166312 amygdala .i 81 to 633 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA388178 thalamus .i 82 to 680 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
DA062291 cerebellum .i 83 to 645 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA293313 hippocampus .i 83 to 649 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DN995129 brain, whole brain .i 83 to 660 1 to 578       578/578
(100 %)
5 diff
(99.2 %id)
DB249808 uterus .i 83 to 612 2 to 531   capped   530/531
(99 %)
1 diff
(99.9 %id)
DA077980 cerebellum .i 84 to 655 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA294309 hippocampus .i 84 to 665 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA529654 brain .i 84 to 692 2 to 611   capped   610/610
(100 %)
1 diff
(99.9 %id)
DA567516   .i 84 to 628 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA874704 Prostate .i 84 to 652 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB024633 testis .i 84 to 632 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BG469017 adenocarcinoma cell line, colon .i 85 to 852 1 to 781       775/830
(93 %)
26 diff
(96.9 %id)
DN996643 breast cancer, Mammary gland (cancer tissue) .i 87 to 662 1 to 576       576/576
(100 %)
5 diff
(99.2 %id)
DA078745 cerebellum .i 92 to 655 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
BC016655 Eye, retinoblastoma .i 95 to 2271 1 to 2177 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2177/2177
(100 %)
0 diff
(100 %id)
DA190345 amygdala .i 95 to 655 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DN992708 brain, whole brain .i 95 to 689 7 to 601       595/601
(99 %)
9 diff
(98.6 %id)
CN369228 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .i 97 to 690 1 to 594       594/594
(100 %)
5 diff
(99.2 %id)
DA170402 amygdala .i 103 to 628 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
DA891357 rectum .i 103 to 659 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA877203 Prostate .i 108 to 686 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB179343 kidney, tumor tissue .i 108 to 671 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB197480 trachea .i 108 to 675 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA948152 Spleen .i 109 to 669 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA292342 hippocampus .i 110 to 678 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA167389 amygdala .i 112 to 666 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA302794 hippocampus .i 112 to 660 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA409715 thalamus .i 112 to 633 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA817606   .i 112 to 676 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA870860 Prostate .i 112 to 636 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
DA875493 Prostate .i 112 to 676 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB187179 liver, tumor tissue .i 112 to 660 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BE779121 eye, retinoblastoma .i 117 to 848 1 to 729       729/915
(79 %)
21 diff
(97.8 %id)
DN996995 breast cancer, Mammary gland (cancer tissue) .i 117 to 756 1 to 640       640/640
(100 %)
5 diff
(99.3 %id)
DB464105 hippocampus .i 120 to 583 1 to 464       464/469
(98 %)
1 diff
(99.8 %id)
CD300091 testis .i 129 to 971 1 to 842       844/842
(100 %)
4 diff
(99.6 %id)
DA745398   .i 140 to 711 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
CA487387   .i 142 to 947 1 to 806       806/899
(89 %)
2 diff
(99.8 %id)
DA596064   .i 144 to 707 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB501657 hypothalamus .i 165 to 642 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BQ423333 melanotic melanoma, skin .i 182 to 1058 1 to 880       880/880
(100 %)
11 diff
(98.8 %id)
DA776013 brain .i 208 to 780 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BI003691 head_normal .i 246 to 585 347 to 10       338/349
(96 %)
1 diff
(99.8 %id)
BT009805   .i 251 to 1933 1 to 1683 exact     1683/1683
(100 %)
0 diff
(100 %id)
CV023061 mixed .i 251 to 883 1 to 627       627/631
(99 %)
10 diff
(98.5 %id)
DB113631 thymus .i 252 to 844 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
TI_1948147056   .i 254 to 1019 130 to 915       796/1329
(59 %)
72 diff
(94.6 %id)
TI_1948147057   .i 254 to 1130 123 to 1017       905/1325
(68 %)
82 diff
(93.9 %id)
TI_1948147376   .i 254 to 961 125 to 842       728/1220
(59 %)
67 diff
(94.6 %id)
TI_1948147377   .i 254 to 820 135 to 715       591/1442
(40 %)
67 diff
(95.4 %id)
TI_1948147705   .i 254 to 1025 123 to 913       799/1318
(60 %)
71 diff
(94.7 %id)
TI_1948147706   .i 254 to 1092 118 to 979       872/1350
(64 %)
76 diff
(94.4 %id)
DN991108 brain, whole brain .i 254 to 845 24 to 621       604/621
(97 %)
8 diff
(98.8 %id)
AW999858 breast_normal .i 263 to 553 306 to 17     Submitted on the opposite strand 290/306
(94 %)
0 diff
(100 %id)
AW993050 breast_normal .i 267 to 522 12 to 266       255/288
(88 %)
10 diff
(96.6 %id)
BE715358 head_neck .i 289 to 494 206 to 1       206/210
(98 %)
6 diff
(97.2 %id)
AW379323 head_neck .i 292 to 664 1 to 376       376/390
(96 %)
22 diff
(94.4 %id)
BU552918 ovary, teratocarcinoma, cell line .i 310 to 1199 1 to 890       890/890
(100 %)
1 diff
(99.9 %id)
BU846095 ovary, teratocarcinoma, cell line .i 310 to 1227 1 to 922       922/923
(99 %)
6 diff
(99.4 %id)
BU855600 ovary, teratocarcinoma, cell line .i 310 to 959 1 to 654       654/818
(79 %)
5 diff
(99.4 %id)
DB047648 testis .i 310 to 837 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
CA391834 eye, RPE/choroid .i 346 to 742 1 to 397       397/397
(100 %)
0 diff
(100 %id)
DA266402 caudate nucleus .i 355 to 907 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB272547 uterus .i 370 to 935 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB115231 thymus .i 374 to 904 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA575907   .i 380 to 912 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
CB150959 cervix, Uterine .i 383 to 1033 1 to 651       651/651
(100 %)
0 diff
(100 %id)
DA487286 brain .i 383 to 959 2 to 578   capped   577/584
(98 %)
1 diff
(99.9 %id)
DA301714 hippocampus .i 384 to 925 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA617760   .i 385 to 980 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
BE933113 head_neck .i 399 to 618 103 to 321       219/321
(68 %)
6 diff
(98.2 %id)
DA155792 amygdala .i 399 to 956 3 to 560   capped   558/559
(99 %)
1 diff
(99.9 %id)
BG115265 duodenal adenocarcinoma, cell line, small intestine .i 419 to 1014 56 to 651       596/954
(62 %)
14 diff
(98.6 %id)
BF092634 testis_normal .i 668 to 1251 615 to 32       584/615
(94 %)
3 diff
(99.6 %id)
BF091926 testis_normal .i 681 to 1106 21 to 445       425/457
(92 %)
9 diff
(98.1 %id)
AW821190 stomach .i 698 to 1230 546 to 13       534/554
(96 %)
4 diff
(99.3 %id)
DA085186 cerebellum .i 700 to 1271 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BX329240   .i 706 to 1534 827 to 1       827/834
(99 %)
6 diff
(99.3 %id)
R35942 whole brain .i 745 to 1130 1 to 392       392/502
(78 %)
11 diff
(97.9 %id)
BI048047 stomach .i 782 to 1230 465 to 10       456/465
(98 %)
27 diff
(94.2 %id)
T80228 whole brain .i 848 to 1234 1 to 398     Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 398/423
(94 %)
20 diff
(95.3 %id)
R36023 whole brain .i 848 to 1251 1 to 415     Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 416/426
(97 %)
17 diff
(96.1 %id)
H16099 whole brain .i 848 to 1248 1 to 405     Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 406/416
(97 %)
10 diff
(97.6 %id)
BX389926   .i 867 to 1786 1 to 920       920/920
(100 %)
7 diff
(99.3 %id)
F05715 brain, total brain .i 978 to 1196 1 to 212       212/212
(100 %)
7 diff
(96.7 %id)
EC491492 Prostate .i 981 to 1074 93 to 1       93/93
(100 %)
1 diff
(99.0 %id)
AW955021   .i 985 to 1616 1 to 628       628/655
(95 %)
13 diff
(98.1 %id)
EC504053 Prostate .i 985 to 1075 89 to 1       89/89
(100 %)
1 diff
(98.9 %id)
EC545711 Prostate .i 999 to 1091 103 to 10       94/103
(91 %)
0 diff
(100 %id)
EC558201 Prostate .i 999 to 1092 94 to 1       94/94
(100 %)
0 diff
(100 %id)
AA322297 brain, cerebellum .i 1061 to 1293 1 to 233       233/233
(100 %)
2 diff
(99.2 %id)
EC501620 Prostate .i 1092 to 1188 97 to 1       97/97
(100 %)
0 diff
(100 %id)
EC503113 Prostate .i 1092 to 1188 97 to 1       97/97
(100 %)
0 diff
(100 %id)
EC514952 Prostate .i 1092 to 1188 97 to 1       97/97
(100 %)
0 diff
(100 %id)
TI_1948147059   .i 1126 to 1930 937 to 127       811/1332
(60 %)
16 diff
(98.8 %id)
TI_1948147707   .i 1126 to 1930 934 to 127       808/1311
(61 %)
9 diff
(99.4 %id)
TI_1948147708   .i 1126 to 1930 942 to 127       816/1311
(62 %)
14 diff
(99.0 %id)
TI_1948147379   .i 1127 to 1930 931 to 127       805/1357
(59 %)
6 diff
(99.6 %id)
R15062 whole brain .i 1138 to 1504 1 to 377     Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 377/408
(92 %)
12 diff
(97.1 %id)
TI_1948147058   .i 1328 to 1930 733 to 130       604/1335
(45 %)
8 diff
(99.5 %id)
BM690168 eye, human retina .i 1341 to 1649 1 to 309       309/309
(100 %)
4 diff
(98.8 %id)
BF917258 uterus_tumor .i 1373 to 1578 1 to 206       206/207
(99 %)
5 diff
(97.6 %id)
TI_1948147378   .i 1502 to 1930 554 to 125       430/1331
(32 %)
5 diff
(99.7 %id)
C00315   .i 1507 to 1708 1 to 203       203/206
(98 %)
2 diff
(99.1 %id)
DB530216 hippocampus .i 1838 to 2271 1 to 434     Submitted on the opposite strand 434/434
(100 %)
1 diff
(99.8 %id)
H16100 whole brain .i 1875 to 2271 414 to 13   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 402/461
(87 %)
10 diff
(97.9 %id)
R49105 whole brain .i 1924 to 2271 368 to 14   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 355/381
(93 %)
11 diff
(97.2 %id)
BI871100 adenocarcinoma, cell line, Liver .i 1938 to 2271 1 to 333   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 333/333
(100 %)
3 diff
(99.1 %id)
TI_57229696   .i 1938 to 2271 80 to 412   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 333/333
(100 %)
3 diff
(99.1 %id)
FN157072 breast carcinoma .i 1941 to 2017 81 to 4     Submitted on the opposite strand 78/81
(96 %)
0 diff
(100 %id)
R41496 whole brain .i 1957 to 2271 341 to 16   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 326/342
(95 %)
18 diff
(94.8 %id)
R49306 whole brain .i 1957 to 2271 335 to 14   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 322/384
(83 %)
9 diff
(97.7 %id)
AI424580 Prostate .i 2000 to 2271 275 to 1       275/275
(100 %)
5 diff
(98.2 %id)
AI363922 anaplastic oligodendroglioma, brain .i 2059 to 2271 213 to 1       213/213
(100 %)
2 diff
(99.1 %id)
R38788 whole brain .i 2104 to 2271 179 to 13   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 167/171
(97 %)
9 diff
(94.8 %id)
H14817 whole brain .i 2131 to 2253 123 to 1       123/123
(100 %)
0 diff
(100 %id)
EC523488 Prostate .i 2161 to 2246 86 to 1       86/90
(95 %)
0 diff
(100 %id)
AK301386 synovial membrane tissue from rheumatoidarthritis .j 1 to 2330 1 to 2330 I45T K115T tiling clone,   2330/2330
(100 %)
3 diff
(99.9 %id)
DC295353 synovial membrane tissue from rheumatioidarthritis .j 1 to 562 1 to 562       562/562
(100 %)
2 diff
(99.7 %id)
DC295355 synovial membrane tissue from rheumatioidarthritis .j 1 to 562 1 to 563       563/563
(100 %)
3 diff
(99.5 %id)
BQ675598 epidermoid carcinoma, cell line, salivary gland .j 1399 to 2232 1 to 842       842/958
(87 %)
28 diff
(97.1 %id)
BQ948115 eye, normal pigmented retinal epithelium .j 1436 to 2283 20 to 872       853/956
(89 %)
24 diff
(97.5 %id)
AI669740 Prostate .j 1541 to 2280 740 to 1       740/740
(100 %)
5 diff
(99.4 %id)
BI762145 pooled colon, kidney, stomach .j 1550 to 2215 1 to 668       668/669
(99 %)
10 diff
(98.6 %id)
TI_57151425   .j 1550 to 2215 29 to 696       668/697
(95 %)
15 diff
(97.9 %id)
AI672185 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .j 1652 to 2283 632 to 1       632/632
(100 %)
7 diff
(98.9 %id)
AI686546 serous papillary carcinoma, high grade, 2pooled tumors, uterus .j 1718 to 2283 574 to 11   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 564/564
(100 %)
6 diff
(99.0 %id)
BF000606 colon, colon tumor, RER+ .j 1768 to 2285 518 to 1       518/529
(97 %)
0 diff
(100 %id)
BQ773670 Chondrosarcoma Grade II, Left Pelvis .j 1783 to 2280 516 to 19   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 498/498
(100 %)
0 diff
(100 %id)
AA700973 liver and spleen .j 1787 to 2268 482 to 1       482/491
(98 %)
6 diff
(98.8 %id)
AW134533   .j 1809 to 2283 492 to 18   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 475/475
(100 %)
1 diff
(99.8 %id)
AI694162 adenocarcinoma, Pancreas .j 1820 to 2283 488 to 24   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 465/465
(100 %)
4 diff
(99.2 %id)
DB572857 hypothalamus .j 1828 to 2283 1 to 456     Submitted on the opposite strand 456/456
(100 %)
1 diff
(99.8 %id)
DB549194 hippocampus .j 1829 to 2283 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
DB539982 hippocampus .j 1837 to 2283 1 to 445     Submitted on the opposite strand 445/445
(100 %)
5 diff
(98.9 %id)
BF476386 Prostate .j 1841 to 2280 442 to 1       442/445
(99 %)
9 diff
(98.0 %id)
BF221954 Prostate .j 1842 to 2280 441 to 1       441/451
(97 %)
8 diff
(98.3 %id)
AA649862 normal prostate, Prostate .j 1845 to 2283 439 to 1       439/500
(87 %)
9 diff
(98.2 %id)
AW874109 follicular carcinoma, thyroid .j 1882 to 2285 405 to 2       404/416
(97 %)
8 diff
(98.1 %id)
AK294174 amygdala .k 1 to 1857 1 to 1857 exact tiling clone,   1857/1857
(100 %)
1 diff
(100.0 %id)
DA145980 amygdala .k 2 to 561 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
AK294357 amygdala .l 1 to 1495 1 to 1495   tiling clone,   1495/1495
(100 %)
1 diff
(100.0 %id)
DC316106 amygdala .l 1 to 552 1 to 552       552/552
(100 %)
0 diff
(100 %id)
AW173258 pooled .l 1205 to 1741 548 to 12   AAA   537/537
(100 %)
5 diff
(99.1 %id)
BQ011342 placenta .l 1303 to 1788 504 to 19   tiling clone, AAA   486/486
(100 %)
1 diff
(99.8 %id)
AW206310   .l 1398 to 1741 361 to 18   AAA   344/344
(100 %)
1 diff
(99.8 %id)
AA720880 germinal center B cell .l 1399 to 1741 366 to 23   AAA   344/399
(86 %)
4 diff
(99.0 %id)
AA809732 germinal center B cell .l 1399 to 1741 366 to 23   AAA   344/408
(84 %)
15 diff
(96.4 %id)
AK225724 testis .m 1 to 2136 1 to 2136 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 2136/2136
(100 %)
2 diff
(100.0 %id)
CR622461 Neuroblastoma Cot 10-normalized .n 1 to 1775 1 to 1775 exact tiling clone,   1775/1775
(100 %)
0 diff
(100 %id)
AL520366 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .n 1 to 910 1 to 912   fully sequenced,   912/912
(100 %)
4 diff
(99.6 %id)
AL520365 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .n 880 to 1775 894 to 1   fully sequenced,   894/894
(100 %)
6 diff
(99.4 %id)
DA462331 cord Blood .o 1 to 825 2 to 825   tiling clone, capped   824/829
(99 %)
12 diff
(98.6 %id)
BQ440657 melanotic melanoma, skin .o 807 to 1635 1 to 834   tiling clone,   834/837
(99 %)
19 diff
(97.8 %id)
CF593410 Human Placenta, placenta .p 1 to 849 29 to 888 V244G K245E E246G L247A H248P ... tiling clone,   860/913
(94 %)
21 diff
(97.7 %id)
BX458087 neuroblastoma .q 1 to 850 1 to 849   tiling clone,   849/849
(100 %)
9 diff
(99.0 %id)
AI220377 pooled .q 648 to 1160 514 to 2   tiling clone,   513/514
(99 %)
2 diff
(99.7 %id)
DA213715 brain .r 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
N46078.
matches multiple genes
multiple sclerosis lesions .r 61 to 455 1 to 398     Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base), also hits gene DICER1 398/405
(98 %)
11 diff
(97.3 %id)
BX440094 brain, fetal brain .r 282 to 1232 963 to 12 M5X V6G S7* tiling clone,   952/963
(98 %)
3 diff
(99.7 %id)
BX440093 brain, fetal brain .r 395 to 1252 860 to 1       860/860
(100 %)
41 diff
(95.3 %id)
BI752167 brain .r 917 to 1270 1 to 355   tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 355/355
(100 %)
1 diff
(99.8 %id)
TI_57215119   .r 917 to 1270 32 to 386   AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 355/386
(91 %)
1 diff
(99.8 %id)
AI608704 ovary, tumor, 5 pooled (see description) .s 1 to 688 688 to 1 T2X K7X K11N L12* tiling clone,   688/689
(99 %)
6 diff
(99.2 %id)
CF594170 Human Placenta, placenta .t 1 to 726 29 to 766 E99D R104K L110T E111G Q112A ... tiling clone,   736/818
(89 %)
30 diff
(96.4 %id)
AL535777 brain, fetal brain .u 1 to 1020 1 to 1013   tiling clone,   1013/1058
(95 %)
10 diff
(99.1 %id)
BX424438 brain, fetal brain .u 1 to 831 1 to 831       831/831
(100 %)
20 diff
(97.6 %id)
BF848918 lung_normal .u 532 to 992 470 to 7   tiling clone, Submitted on the opposite strand 464/516
(89 %)
0 diff
(100 %id)
AL566047 brain, fetal brain .u 1010 to 1837 827 to 1 T93X E96Z E97X A101X D102X ... tiling clone,   827/861
(96 %)
19 diff
(97.8 %id)
AI968347 pooled germ cell tumors .u 1373 to 1895 541 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 524/524
(100 %)
1 diff
(99.9 %id)
BF057810 pooled germ cell tumors .u 1378 to 1902 535 to 11   tiling clone, AAA Possibly primed on the genome, locally A rich (14/17 A in genome downstream of last aligned base) 525/525
(100 %)
1 diff
(99.9 %id)
DA402966 thalamus .va 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
BQ723587 sympathetic trunk .vb 1 to 918 1 to 913 exact tiling clone,   913/913
(100 %)
9 diff
(99.1 %id)
BG575054 breast, mammary adenocarcinoma, cell line .vb 338 to 1089 1 to 751   tiling clone,   751/753
(99 %)
5 diff
(99.4 %id)
DA210530 brain .vc 1 to 564 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
AW327909 Burkitt lymphoma, lymph .vc 171 to 868 4 to 712       720/712
(101 %)
56 diff
(92.2 %id)
BQ894720 dorsal root ganglia .vc 839 to 1702 1 to 869   tiling clone,   869/878
(98 %)
20 diff
(97.8 %id)
AW327868 Burkitt lymphoma, lymph .vc 1019 to 1503 485 to 1       485/485
(100 %)
0 diff
(100 %id)
AW518553 lymph node, lymphoma, follicular mixed small and largecell .vc 1108 to 1320 213 to 1       213/214
(99 %)
0 diff
(100 %id)
AA679493   .vc 1122 to 1489 368 to 1       368/368
(100 %)
16 diff
(95.7 %id)
CR737224 senescent fibroblast .vc 1305 to 1978 1 to 674   tiling clone,   674/674
(100 %)
0 diff
(100 %id)
W53041 senescent fibroblast .vc 1968 to 2402 444 to 2   tiling clone,   443/449
(98 %)
0 diff
(100 %id)
AI524795 Kidney .vd 1 to 419 419 to 1 exact tiling clone,   419/419
(100 %)
1 diff
(99.8 %id)
BM918263 blood, natural killer cells, cell line .ve 1 to 975 3 to 993 exact tiling clone,   993/1061
(93 %)
28 diff
(97.4 %id)
BE933044 head_neck .ve 490 to 796 318 to 10   tiling clone,   309/318
(97 %)
0 diff
(100 %id)
BX485192   .vf-u 1 to 530 1 to 530 exact tiling clone,   530/530
(100 %)
1 diff
(99.9 %id)
CV364450 placenta_normal .vf-u 491 to 652 1 to 163   tiling clone,   163/163
(100 %)
15 diff
(90.8 %id)
DN993557 brain, whole brain .vg 1 to 651 1 to 651   tiling clone,   651/651
(100 %)
6 diff
(99.1 %id)
AU121809 mammary gland .vg 478 to 1325 2 to 848 exact tiling clone, capped   847/849
(99 %)
6 diff
(99.3 %id)
DA354629 substantia nigra .vh 1 to 553 2 to 554 exact tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DA262490 caudate nucleus .vi 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
CD109947 Human Placenta, placenta .vj 1 to 755 29 to 785 P21L tiling clone,   757/785
(96 %)
12 diff
(98.5 %id)
CD109465 Human Placenta, placenta .vj 1 to 754 29 to 788 P21L tiling clone,   760/788
(96 %)
13 diff
(98.4 %id)
CF995080 Human Placenta, placenta .vj 1 to 750 29 to 785 P21L     757/885
(85 %)
18 diff
(98.0 %id)
DB526047 testis .vk 1 to 412 1 to 412 A78G tiling clone, Submitted on the opposite strand 412/412
(100 %)
1 diff
(99.8 %id)
DB162805 thymus .vl 1 to 593 2 to 594 exact tiling clone, capped   593/593
(100 %)
2 diff
(99.7 %id)
BQ370458 placenta_normal .vl 170 to 371 211 to 4   tiling clone,   208/218
(95 %)
0 diff
(100 %id)
CN282053 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .vm-u 1 to 368 1 to 368   tiling clone,   368/368
(100 %)
5 diff
(98.7 %id)
BU656293 blood .vm-u 278 to 739 17 to 478   tiling clone,   462/478
(96 %)
6 diff
(98.8 %id)
CK005428 brain/CNS, Human Brain - Frontal Cortex .vm-u 433 to 1120 1 to 684   tiling clone,   684/684
(100 %)
10 diff
(98.6 %id)
AA553487 Schwannoma tumor .vm-u 788 to 1275 487 to 1   tiling clone,   487/487
(100 %)
3 diff
(99.4 %id)
TI_149289875   .vm-u 1233 to 1294 121 to 60   tiling clone,   666/770
(86 %)
8 diff
(99.0 %id)
BM973034 lung .vm-u 1233 to 1275 61 to 19   AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 618/671
(92 %)
12 diff
(98.3 %id)
DA837279.
matches multiple genes
placenta .vn 1 to 214 2 to 216   tiling clone, capped also hits gene LSM10andSTK40 215/215
(100 %)
2 diff
(99.1 %id)
DA837277 placenta .vn 2 to 548 2 to 548 exact tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
DN917239   .vo-u 1 to 539 33 to 570 exact tiling clone,   538/570
(94 %)
6 diff
(99.0 %id)
BF361750 nervous_normal .vp-u 1 to 445 1 to 449 S2* tiling clone,   449/450
(99 %)
6 diff
(98.7 %id)
FN083573 breast carcinoma .vp-u 321 to 419 95 to 1   tiling clone, Submitted on the opposite strand 95/95
(100 %)
3 diff
(96.9 %id)
AA988410 Kidney, kidney tumor .vq-u 1 to 351 352 to 1 exact tiling clone,   352/352
(100 %)
1 diff
(99.8 %id)
BE933022 head_neck .vr-u 1 to 284 1 to 282 L3I V4S L5W V6Y F7P ... tiling clone,   282/282
(100 %)
7 diff
(97.6 %id)
AK022277 mammary gland Gene DTNB, variant not shown       available from FLJ, This clone was ignored    
AK094494 cerebellum Gene DTNB, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
BE063136 breast Gene DTNB, variant not shown              
BF356863 head_neck Gene DTNB, variant not shown              
BF917239 uterus_tumor Gene DTNB, variant not shown         This clone was ignored    
BI052639 placenta_normal Gene DTNB, variant not shown              
DB297758 cerebellum Gene DTNB, variant not shown         Suspected internal deletion, this clone was ignored    
DA076351 cerebellum Gene DTNB, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB301337 amygdala Gene DTNB, variant not shown              
DA143980 amygdala Gene DTNB, variant not shown       capped      
DB303187 amygdala Gene DTNB, variant not shown              
DA187172 amygdala Gene DTNB, variant not shown       capped      
DA266864 caudate nucleus Gene DTNB, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA339228 hippocampus Gene DTNB, variant not shown       capped      
CN414483 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 Gene DTNB, variant not shown              
AL530626 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized Gene DTNB, variant not shown         This clone was ignored    
AL530627 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized Gene DTNB, variant not shown         This clone was ignored    
H00865 placenta Gene DTNB, variant not shown              
H01243 placenta Gene DTNB, variant not shown              
AW204398   Gene DTNB, variant not shown         Suspected internal deletion, this clone was ignored    
BF115207 Kidney Gene DTNB, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BE552374 pooled germ cell tumors Gene DTNB, variant not shown         Suspected internal deletion, this clone was ignored    
BE500997 pooled germ cell tumors Gene DTNB, variant not shown         Suspected internal deletion, this clone was ignored    
DB380969 placenta Gene DTNB, variant not shown         This clone was ignored    
DA833958 placenta Gene DTNB, variant not shown       capped This clone was ignored    
DA961303 Spleen Gene DTNB, variant not shown       capped Suspected internal deletion, this clone was ignored    
Y15718 skeletal muscle Gene DTNB, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf-u, .vg, .vh, .vi, .vj, .vk, .vl, .vm-u, .vn, .vo-u, .vp-u, .vq-u, .vr-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI