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Gene DSG1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
90 supporting clones for gene DSG1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF097935 foreskin .a 1 to 4513 1 to 4512 M11V tiling clone,   4512/4512
(100 %)
10 diff
(99.8 %id)
NM_001942.2   .a 2 to 5448 1 to 5447 exact RefSeq,   5447/5447
(100 %)
1 diff
(100.0 %id)
BX476267   .a 29 to 556 1 to 528       528/528
(100 %)
1 diff
(99.9 %id)
BX645688   .a 66 to 621 1 to 556   tiling clone,   556/556
(100 %)
0 diff
(100 %id)
X56654   .a 137 to 3879 1 to 3743 M11V     3743/3750
(99 %)
5 diff
(99.9 %id)
EL594123 epidermis, skin .a 197 to 895 1 to 692       692/824
(83 %)
16 diff
(98.1 %id)
CU455677 epidermis .a 829 to 1622 822 to 30     Submitted on the opposite strand 793/822
(96 %)
3 diff
(99.7 %id)
CU447278 epidermis .a 851 to 1622 801 to 30     Submitted on the opposite strand 772/801
(96 %)
2 diff
(99.8 %id)
CU456411 epidermis .a 880 to 1622 772 to 30   tiling clone, Submitted on the opposite strand 743/772
(96 %)
0 diff
(100 %id)
CU447434 epidermis .a 897 to 1689 809 to 17     Submitted on the opposite strand 793/809
(98 %)
1 diff
(99.9 %id)
CU450560 epidermis .a 925 to 1622 727 to 30     Submitted on the opposite strand 698/727
(96 %)
1 diff
(99.9 %id)
BE185305 head_neck .a 929 to 1290 14 to 375       362/375
(96 %)
10 diff
(97.4 %id)
DA762400 tongue .a 1293 to 1877 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
CU444655 epidermis .a 1807 to 2313 542 to 36     Submitted on the opposite strand 507/561
(90 %)
0 diff
(100 %id)
EL594679 epidermis, skin .a 2024 to 2470 455 to 10     Submitted on the opposite strand 446/471
(94 %)
4 diff
(99.2 %id)
EL594709 epidermis, skin .a 2024 to 2470 18 to 463       446/481
(92 %)
8 diff
(98.4 %id)
BM706850 eye, optic nerve .a 2266 to 2854 9 to 597       589/597
(98 %)
7 diff
(98.9 %id)
BG214030   .a 2308 to 3102 1 to 795       795/795
(100 %)
28 diff
(96.5 %id)
BG200946   .a 2309 to 3111 1 to 802       802/803
(99 %)
6 diff
(99.3 %id)
EL594573 epidermis, skin .a 2310 to 2750 22 to 462       441/476
(92 %)
4 diff
(99.2 %id)
CV575826 cornea, eye .a 2634 to 3252 1 to 619       619/619
(100 %)
0 diff
(100 %id)
CV571933 cornea, eye .a 2655 to 3226 1 to 572       572/572
(100 %)
0 diff
(100 %id)
CV573125 cornea, eye .a 2658 to 3241 1 to 584       584/584
(100 %)
0 diff
(100 %id)
CU450453 epidermis .a 2798 to 3378 587 to 5     Submitted on the opposite strand 583/595
(97 %)
0 diff
(100 %id)
CV570660 cornea, eye .a 2813 to 3421 1 to 609       609/609
(100 %)
1 diff
(99.9 %id)
CV575447 cornea, eye .a 2839 to 3427 1 to 589       589/593
(99 %)
1 diff
(99.9 %id)
CV572860 cornea, eye .a 2843 to 3442 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
BM688574 eye, eye anterior segment .a 2866 to 3094 9 to 237     Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 229/237
(96 %)
6 diff
(97.5 %id)
BX091896 liver and spleen .a 2945 to 3735 1 to 792       792/792
(100 %)
9 diff
(98.9 %id)
T99003 liver and spleen .a 2945 to 3200 1 to 257       257/264
(97 %)
7 diff
(97.4 %id)
T70766 liver and spleen .a 2946 to 3174 1 to 229       229/229
(100 %)
18 diff
(92.2 %id)
CU443773 epidermis .a 3016 to 3739 8 to 731       724/737
(98 %)
8 diff
(99.0 %id)
CU445359 epidermis .a 3016 to 3739 734 to 11     Submitted on the opposite strand 724/741
(97 %)
0 diff
(100 %id)
CU447684 epidermis .a 3016 to 3739 734 to 11     Submitted on the opposite strand 724/741
(97 %)
0 diff
(100 %id)
CU447759 epidermis .a 3016 to 3739 8 to 731       724/741
(97 %)
7 diff
(99.1 %id)
CU454942 epidermis .a 3016 to 3712 8 to 705       698/715
(97 %)
5 diff
(99.4 %id)
CU456023 epidermis .a 3016 to 3739 8 to 731       724/741
(97 %)
7 diff
(99.1 %id)
CU457000 epidermis .a 3016 to 3739 734 to 11     Submitted on the opposite strand 724/741
(97 %)
0 diff
(100 %id)
W94221 heart .a 3016 to 3378 1 to 363   fully sequenced,   363/363
(100 %)
0 diff
(100 %id)
BM807172 duodenal adenocarcinoma, cell line, small intestine .a 3043 to 3826 1 to 785   AAA   785/785
(100 %)
7 diff
(99.2 %id)
CU450209 epidermis .a 3051 to 3739 727 to 39     Submitted on the opposite strand 689/727
(94 %)
0 diff
(100 %id)
CU444441 epidermis .a 3052 to 3739 698 to 11     Submitted on the opposite strand 688/698
(98 %)
0 diff
(100 %id)
CU447261 epidermis .a 3066 to 3739 710 to 38     Submitted on the opposite strand 673/710
(94 %)
0 diff
(100 %id)
AI208332   .a 3260 to 3830 573 to 3       571/573
(99 %)
0 diff
(100 %id)
BF984971 duodenal adenocarcinoma, cell line, small intestine .a 3326 to 4067 1 to 758   AAA   758/906
(83 %)
33 diff
(96.4 %id)
W72927 heart .a 3348 to 3829 485 to 1   fully sequenced,   485/485
(100 %)
6 diff
(98.8 %id)
CV573792 cornea, eye .a 3355 to 3973 1 to 619       619/619
(100 %)
1 diff
(99.9 %id)
BF508352   .a 3366 to 3823 475 to 18   AAA   458/458
(100 %)
5 diff
(99.0 %id)
T98952 liver and spleen .a 3477 to 3819 345 to 1       345/345
(100 %)
4 diff
(98.9 %id)
BG740639 skin .a 3491 to 4282 1 to 792       792/792
(100 %)
4 diff
(99.5 %id)
T69781 liver and spleen .a 3517 to 3803 290 to 1       290/290
(100 %)
6 diff
(98.0 %id)
BG742531 skin .a 3553 to 4380 1 to 833       833/863
(96 %)
10 diff
(98.9 %id)
BG681002 skin, squamous cell carcinoma .a 3658 to 4405 1 to 746       746/747
(99 %)
12 diff
(98.4 %id)
CB999708 Pooled-Skin .a 3731 to 4088 1 to 359       359/853
(42 %)
4 diff
(99.6 %id)
EL594283 epidermis, skin .a 3747 to 4300 583 to 21     Submitted on the opposite strand 563/741
(75 %)
0 diff
(100 %id)
AW238521 carcinoma in situ from retromolar trigone .a 3813 to 4081 1 to 269     Submitted on the opposite strand 269/269
(100 %)
6 diff
(97.8 %id)
CU446594 epidermis .a 3870 to 4131 275 to 14     Submitted on the opposite strand 262/286
(91 %)
0 diff
(100 %id)
CU451575 epidermis .a 3870 to 4131 12 to 273       262/287
(91 %)
2 diff
(99.4 %id)
CU454742 epidermis .a 3870 to 4131 12 to 273       262/287
(91 %)
1 diff
(99.7 %id)
BG742129 skin .a 3885 to 4716 1 to 835   tiling clone,   835/838
(99 %)
16 diff
(98.1 %id)
AF088042   .a 3910 to 4396 1 to 487   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 487/487
(100 %)
0 diff
(100 %id)
W76205 heart .a 3910 to 4398 1 to 491       491/491
(100 %)
3 diff
(99.4 %id)
W72968 heart .a 3938 to 4396 463 to 1       463/463
(100 %)
4 diff
(99.2 %id)
AA041427 heart .a 3948 to 4211 1 to 265       265/265
(100 %)
1 diff
(99.7 %id)
AI127361 heart .a 3978 to 4398 421 to 1       421/421
(100 %)
0 diff
(100 %id)
W32235 heart .a 3987 to 4220 1 to 239       239/239
(100 %)
3 diff
(98.8 %id)
AI217100 heart .a 4027 to 4396 370 to 1       370/370
(100 %)
0 diff
(100 %id)
CV571963 cornea, eye .a 4183 to 4757 1 to 575       575/575
(100 %)
0 diff
(100 %id)
CU452165 epidermis .a 4387 to 4699 356 to 43     Submitted on the opposite strand 314/361
(86 %)
0 diff
(100 %id)
CV571106 cornea, eye .a 4413 to 5007 1 to 595   tiling clone,   595/595
(100 %)
0 diff
(100 %id)
AI144410 heart .a 4458 to 5028 571 to 1       571/571
(100 %)
0 diff
(100 %id)
CV571290 cornea, eye .a 4488 to 5037 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DB511160 testis .a 4518 to 4936 1 to 429   AAA Submitted on the opposite strand 429/429
(100 %)
18 diff
(95.9 %id)
AI147042 heart .a 4584 to 5030 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AW104873 pooled .a 4628 to 5031 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AA041388 heart .a 4630 to 5028 399 to 1       399/399
(100 %)
1 diff
(99.8 %id)
AA736397 heart .a 4655 to 4931 277 to 1       277/277
(100 %)
0 diff
(100 %id)
BU727128 eye, eye anterior segment .a 4668 to 5045 396 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 378/378
(100 %)
0 diff
(100 %id)
W02036 heart .a 4685 to 5028 345 to 1       345/345
(100 %)
4 diff
(98.9 %id)
W79210 heart .a 4745 to 5161 1 to 418       418/418
(100 %)
1 diff
(99.8 %id)
CV574362 cornea, eye .a 4807 to 5448 1 to 642   tiling clone,   642/642
(100 %)
0 diff
(100 %id)
CV570363 cornea, eye .a 4824 to 5441 1 to 618       618/618
(100 %)
0 diff
(100 %id)
CV570810 cornea, eye .a 5081 to 5693 1 to 613   tiling clone,   613/613
(100 %)
1 diff
(99.9 %id)
CU455260 epidermis .a 5341 to 6016 7 to 682   tiling clone,   676/683
(98 %)
6 diff
(99.2 %id)
BG719690 testis .b 1 to 825 1 to 837       837/838
(99 %)
36 diff
(95.8 %id)
BI461582 testis .b 1 to 819 1 to 822   tiling clone,   822/857
(95 %)
21 diff
(97.6 %id)
BI463278 testis .b 1 to 688 1 to 717       636/718
(88 %)
73 diff
(89.9 %id)
AK302888 testis .b 6 to 1862 1 to 1857 exact tiling clone,   1857/1857
(100 %)
0 diff
(100 %id)
DC403297 testis .b 6 to 564 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC401521 testis .b 13 to 560 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DC401802 testis .b 13 to 578 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC401873 testis .b 15 to 582 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC401513 testis .b 17 to 550 1 to 534       534/535
(99 %)
2 diff
(99.7 %id)
DC402431 testis .b 17 to 573 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DC402513 testis .b 17 to 571 1 to 555       555/555
(100 %)
0 diff
(100 %id)
AA577788 gastric tumor, stomach .c-u 1 to 539 539 to 1 exact     539/539
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI