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Gene DSCAMTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
50 supporting clones for gene DSCAM back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF217525   .a 1 to 6631 1 to 6631 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 6631/6631
(100 %)
0 diff
(100 %id)
NM_001389.3   .a 27 to 7136 1 to 7110 exact RefSeq,   7110/7110
(100 %)
1 diff
(100.0 %id)
AB209136 brain .a 444 to 7137 1 to 6694   tiling clone,   6694/6694
(100 %)
2 diff
(100.0 %id)
AL713083 human skeletal muscle .a 453 to 975 2 to 524       523/524
(99 %)
6 diff
(98.9 %id)
AF023449 brain .a 521 to 6631 1 to 6110       6110/6110
(100 %)
1 diff
(100.0 %id)
DN919709   .a 2147 to 2745 1 to 595       595/595
(100 %)
8 diff
(98.7 %id)
DA504532 brain .a 2855 to 3338 2 to 485   capped   484/484
(100 %)
0 diff
(100 %id)
BF928859 nervous_tumor .a 2916 to 3190 287 to 15     Submitted on the opposite strand 273/287
(95 %)
5 diff
(98.3 %id)
DA778579 brain .a 3087 to 3656 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA506982 brain .a 3163 to 3714 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
DA786940 brain .a 3346 to 3923 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA127689 cerebellum .a 3354 to 3938 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BQ307249 breast .a 3381 to 3884 513 to 5       507/513
(98 %)
14 diff
(97.3 %id)
BQ307322 breast .a 3574 to 4154 580 to 1       580/580
(100 %)
5 diff
(99.2 %id)
BQ306144 breast .a 3775 to 4256 1 to 483       483/483
(100 %)
6 diff
(98.8 %id)
BQ307670 breast .a 3883 to 4255 381 to 4       378/383
(98 %)
20 diff
(94.8 %id)
BG819678 anaplastic oligodendroglioma with 1p/19qloss, brain .a 3937 to 4584 1 to 651       651/653
(99 %)
12 diff
(98.2 %id)
DA783935 brain .a 4158 to 4740 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
AJ003472   .a 4512 to 4858 355 to 9       347/355
(97 %)
2 diff
(99.5 %id)
BM547634 brain, hippocampus .a 5225 to 6162 1 to 941       941/1093
(86 %)
9 diff
(99.2 %id)
F13426 brain, total brain .a 5305 to 5615 1 to 310       310/310
(100 %)
6 diff
(98.1 %id)
Z45894 brain, total brain .a 5314 to 5608 1 to 294       294/294
(100 %)
2 diff
(99.4 %id)
BF926594 nervous_tumor .a 5513 to 5857 40 to 384       345/495
(69 %)
7 diff
(98.6 %id)
TI_57240599   .a 5879 to 6631 35 to 791       757/882
(85 %)
17 diff
(98.1 %id)
BI914009 brain .a 5881 to 6631 1 to 755       755/846
(89 %)
12 diff
(98.6 %id)
AF086100   .a 5921 to 6631 1 to 711   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 711/711
(100 %)
0 diff
(100 %id)
N80326 multiple sclerosis lesions .a 5926 to 6420 10 to 507       498/510
(97 %)
20 diff
(96.1 %id)
BE219623 carcinoid, lung .a 6012 to 6631 619 to 1       619/621
(99 %)
15 diff
(97.6 %id)
BM987994 mixed .a 6113 to 6631 537 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 519/519
(100 %)
0 diff
(100 %id)
BE221601 carcinoid, lung .a 6163 to 6631 469 to 1       469/482
(97 %)
1 diff
(99.8 %id)
TI_154078183   .a 6163 to 6626 584 to 119   AAA   466/579
(80 %)
0 diff
(100 %id)
AW297720   .a 6183 to 6631 466 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 449/449
(100 %)
0 diff
(100 %id)
AI243628 pooled .a 6196 to 6635 439 to 1       439/439
(100 %)
6 diff
(98.7 %id)
G36681   .a 6209 to 6632 429 to 1     Submitted on the opposite strand 429/430
(99 %)
7 diff
(98.4 %id)
N64532 multiple sclerosis lesions .a 6209 to 6632 429 to 1       429/430
(99 %)
7 diff
(98.4 %id)
AI094516 brain, glioblastoma (pooled) .a 6210 to 6630 419 to 1       419/419
(100 %)
2 diff
(99.6 %id)
CA454333   .a 6301 to 6662 1 to 364   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 364/364
(100 %)
1 diff
(99.8 %id)
Z41519 brain, total brain .a 6311 to 6631 321 to 1       321/321
(100 %)
0 diff
(100 %id)
AI051251 brain, glioblastoma (pooled) .a 6326 to 6630 307 to 3       305/307
(99 %)
0 diff
(100 %id)
F09100 brain, total brain .a 6380 to 6631 252 to 1       252/252
(100 %)
1 diff
(99.7 %id)
AI880033 brain, oligodendroglioma .a 6399 to 6554 156 to 1       156/156
(100 %)
0 diff
(100 %id)
AA878733 carcinoid, lung .a 6445 to 6631 187 to 1       187/187
(100 %)
0 diff
(100 %id)
BE503065 carcinoid, lung .a 6625 to 7138 517 to 4       514/517
(99 %)
0 diff
(100 %id)
AA932822 carcinoid, lung .a 6778 to 7112 334 to 1       334/334
(100 %)
1 diff
(99.8 %id)
AI681170 carcinoid, lung .a 6879 to 7108 267 to 37       231/267
(86 %)
0 diff
(100 %id)
BF057993 brain, oligodendroglioma .a 7031 to 7136 1 to 106       106/124
(85 %)
1 diff
(99.2 %id)
BX492788   .b 1 to 600 27 to 625   tiling clone,   599/625
(95 %)
7 diff
(98.9 %id)
AF289030   .b 262 to 5616 1 to 5355   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 5355/5355
(100 %)
0 diff
(100 %id)
AF023450 brain .c 1 to 6414 1 to 6413 exact tiling clone,   6413/6413
(100 %)
1 diff
(100.0 %id)
DA279080 corpus callosum .d 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
4 diff
(99.3 %id)
DB307278 corpus callosum .d 1266 to 1798 534 to 1   tiling clone,   534/534
(100 %)
1 diff
(99.9 %id)
BG187880   .e-u 1 to 483 1 to 484 exact tiling clone,   484/487
(99 %)
3 diff
(99.4 %id)
DN919710   .f 1 to 509 509 to 1 exact tiling clone,   509/509
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI