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Gene DNAI1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
139 supporting clones for gene DNAI1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB046118 testis DNAI1.a 1 to 576 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
TI_59391829   DNAI1.a 60 to 854 52 to 858       807/809
(99 %)
17 diff
(97.9 %id)
BM013886 breast, mammary adenocarcinoma, cell line DNAI1.a 61 to 854 1 to 806       806/808
(99 %)
17 diff
(97.9 %id)
NM_012144.2   DNAI1.a 61 to 2580 1 to 2520 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 2520/2520
(100 %)
0 diff
(100 %id)
DB052747 testis DNAI1.a 65 to 626 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BG773024 testis DNAI1.a 67 to 490 1 to 422       422/425
(99 %)
10 diff
(97.7 %id)
BC030583 testis DNAI1.a 72 to 2580 1 to 2509 A8S Y202C P495Q tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 2509/2509
(100 %)
4 diff
(99.9 %id)
DB442389 testis DNAI1.a 73 to 495 1 to 424       424/424
(100 %)
4 diff
(99.1 %id)
BI459316 testis DNAI1.a 73 to 704 1 to 637       637/637
(100 %)
9 diff
(98.6 %id)
DB035476 testis DNAI1.a 74 to 622 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AK290696 lung DNAI1.a 76 to 2445 1 to 2370 V335I I391N C423R N540S     2370/2371
(99 %)
6 diff
(99.8 %id)
DB451732 testis DNAI1.a 76 to 570 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
DA583098 lung DNAI1.a 77 to 668 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA591109 lung DNAI1.a 77 to 625 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB035618 testis DNAI1.a 77 to 630 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB045247 testis DNAI1.a 77 to 640 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB059304 testis DNAI1.a 77 to 624 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA593011 lung DNAI1.a 78 to 557 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
TI_57177743   DNAI1.a 81 to 903 29 to 853       825/856
(96 %)
22 diff
(97.5 %id)
AF091619 trachea; testis DNAI1.a 83 to 2578 1 to 2496 exact tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 2496/2498
(99 %)
2 diff
(100.0 %id)
DB035898 testis DNAI1.a 83 to 659 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
BI766430 pooled lung and spleen DNAI1.a 86 to 903 1 to 820       820/823
(99 %)
18 diff
(97.9 %id)
AK314639 testis DNAI1.a 88 to 2353 1 to 2266 F375L     2266/2266
(100 %)
1 diff
(100.0 %id)
DB020284 testis DNAI1.a 89 to 572 2 to 486   capped   485/485
(100 %)
1 diff
(99.8 %id)
DB455645 testis DNAI1.a 95 to 574 1 to 480       480/480
(100 %)
2 diff
(99.6 %id)
DB027222 testis DNAI1.a 96 to 702 2 to 608   capped   607/607
(100 %)
0 diff
(100 %id)
DB053981 testis DNAI1.a 96 to 649 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BI461714 testis DNAI1.a 108 to 780 1 to 660       662/660
(100 %)
22 diff
(96.7 %id)
DB048646 testis DNAI1.a 114 to 688 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
DB023725 testis DNAI1.a 128 to 671 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB051950 testis DNAI1.a 128 to 688 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB453496 testis DNAI1.a 129 to 631 1 to 503       503/503
(100 %)
2 diff
(99.7 %id)
DB023317 testis DNAI1.a 129 to 648 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
DB058226 testis DNAI1.a 129 to 666 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DB025084 testis DNAI1.a 130 to 677 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB038652 testis DNAI1.a 130 to 709 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DB053193 testis DNAI1.a 130 to 702 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DB048692 testis DNAI1.a 135 to 716 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DB449509 testis DNAI1.a 138 to 571 1 to 434       434/434
(100 %)
0 diff
(100 %id)
DB020411 testis DNAI1.a 138 to 598 2 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DB021660 testis DNAI1.a 138 to 700 2 to 568   capped   567/567
(100 %)
5 diff
(99.2 %id)
DB022580 testis DNAI1.a 138 to 648 2 to 513   capped   512/512
(100 %)
2 diff
(99.7 %id)
DB029734 testis DNAI1.a 138 to 717 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB030242 testis DNAI1.a 138 to 707 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB031276 testis DNAI1.a 138 to 696 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB043751 testis DNAI1.a 138 to 714 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DB034167 testis DNAI1.a 141 to 732 2 to 593   capped   592/592
(100 %)
2 diff
(99.7 %id)
TI_43963108   DNAI1.a 142 to 984 31 to 868       838/868
(96 %)
20 diff
(97.7 %id)
BI520253 brain, medulla DNAI1.a 145 to 984 1 to 835       835/835
(100 %)
15 diff
(98.3 %id)
DB450603 testis DNAI1.a 170 to 515 1 to 346       346/432
(80 %)
26 diff
(94.0 %id)
DB023845 testis DNAI1.a 171 to 722 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB022816 testis DNAI1.a 172 to 729 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DB027468 testis DNAI1.a 201 to 796 2 to 599   capped   598/598
(100 %)
6 diff
(99.0 %id)
DA305941 hippocampus DNAI1.a 202 to 785 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DB039317 testis DNAI1.a 343 to 898 2 to 562   capped   561/561
(100 %)
8 diff
(98.6 %id)
BM554168 brain, medulla DNAI1.a 582 to 1565 26 to 1022       997/1041
(95 %)
30 diff
(97.2 %id)
BE938444 testis_normal DNAI1.a 665 to 1208 1 to 546       546/546
(100 %)
9 diff
(98.4 %id)
BE280631 choriocarcinoma, placenta DNAI1.a 706 to 1318 1 to 614       614/733
(83 %)
6 diff
(99.2 %id)
DB041387 testis DNAI1.a 732 to 1276 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
BM127557 Islets of Langerhans, Pancreas DNAI1.a 866 to 1447 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BU570266 testis DNAI1.a 918 to 1636 1 to 727       727/810
(89 %)
16 diff
(98.1 %id)
CD708614 normal nasopharynx DNAI1.a 1028 to 1289 15 to 276       262/276
(94 %)
8 diff
(97.2 %id)
TI_149314714   DNAI1.a 1820 to 2580 828 to 79   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 750/934
(80 %)
33 diff
(96.5 %id)
TI_159715190   DNAI1.a 1961 to 2580 718 to 98   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 621/1023
(60 %)
11 diff
(99.0 %id)
BM127260 Islets of Langerhans, Pancreas DNAI1.a 2006 to 2348 343 to 1       343/343
(100 %)
3 diff
(99.2 %id)
CB306705 Human Lung Epithelial cells, lung DNAI1.a 2006 to 2580 594 to 19   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 576/576
(100 %)
2 diff
(99.7 %id)
CB306230 lung, Primary Lung Cystic Fibrosis EpithelialCells DNAI1.a 2040 to 2580 561 to 19   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 543/543
(100 %)
6 diff
(98.9 %id)
AI628873 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors DNAI1.a 2087 to 2582 497 to 1       497/497
(100 %)
3 diff
(99.4 %id)
AI699032 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors DNAI1.a 2101 to 2581 488 to 1       488/490
(99 %)
13 diff
(97.4 %id)
DB518968 testis DNAI1.a 2116 to 2580 1 to 465     Submitted on the opposite strand 465/465
(100 %)
1 diff
(99.8 %id)
DB514525 testis DNAI1.a 2140 to 2580 1 to 441     Submitted on the opposite strand 441/441
(100 %)
3 diff
(99.4 %id)
DB517204 testis DNAI1.a 2142 to 2580 1 to 439     Submitted on the opposite strand 439/439
(100 %)
1 diff
(99.8 %id)
DB507224 testis DNAI1.a 2152 to 2580 1 to 431     Submitted on the opposite strand 431/431
(100 %)
9 diff
(98.0 %id)
DB521088 testis DNAI1.a 2153 to 2580 1 to 429     Submitted on the opposite strand 429/429
(100 %)
2 diff
(99.6 %id)
AI633178 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors DNAI1.a 2177 to 2581 409 to 5       405/409
(99 %)
0 diff
(100 %id)
AA909374 pooled DNAI1.a 2178 to 2581 412 to 8       405/412
(98 %)
18 diff
(95.7 %id)
TI_159714934   DNAI1.a 2205 to 2582 468 to 92   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 377/1033
(36 %)
6 diff
(99.5 %id)
CB321848 Human Lung Epithelial cells, lung DNAI1.a 2205 to 2582 393 to 17   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 377/377
(100 %)
6 diff
(98.5 %id)
AI953703 pooled germ cell tumors DNAI1.a 2213 to 2580 368 to 1       368/368
(100 %)
0 diff
(100 %id)
AW594489 pooled germ cell tumors DNAI1.a 2213 to 2577 371 to 7       365/371
(98 %)
0 diff
(100 %id)
AA609218   DNAI1.a 2216 to 2580 376 to 12   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 365/365
(100 %)
0 diff
(100 %id)
AW025946 pooled germ cell tumors DNAI1.a 2241 to 2580 340 to 1       340/340
(100 %)
0 diff
(100 %id)
DB516058 testis DNAI1.a 2249 to 2580 1 to 332     Submitted on the opposite strand 332/332
(100 %)
4 diff
(98.8 %id)
DB517223 testis DNAI1.a 2328 to 2580 1 to 253     Submitted on the opposite strand 253/253
(100 %)
4 diff
(98.5 %id)
AI784188 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus DNAI1.a 2358 to 2586 235 to 7       229/235
(97 %)
0 diff
(100 %id)
FN087131 breast carcinoma DNAI1.a 2368 to 2448 1 to 78       78/78
(100 %)
3 diff
(96.2 %id)
AI018373   DNAI1.a 2401 to 2580 193 to 14   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 180/180
(100 %)
0 diff
(100 %id)
FN098701 breast carcinoma DNAI1.a 2480 to 2572 1 to 93       93/93
(100 %)
0 diff
(100 %id)
DB522551 testis DNAI1.b 1 to 478 1 to 478   tiling clone, Submitted on the opposite strand 478/478
(100 %)
5 diff
(99.0 %id)
DB231614 trachea DNAI1.b 177 to 774 2 to 600   tiling clone, to resequence, capped   599/599
(100 %)
3 diff
(99.5 %id)
DB350035 trachea DNAI1.b 1430 to 1974 545 to 1   tiling clone, to resequence,   545/545
(100 %)
0 diff
(100 %id)
DB020595 testis DNAI1.c 1 to 562 2 to 563   tiling clone, capped   562/565
(99 %)
2 diff
(99.7 %id)
AL049008 testis DNAI1.c 339 to 832 1 to 494   tiling clone,   494/538
(91 %)
9 diff
(98.4 %id)
DB033871 testis DNAI1.d 1 to 586 2 to 587   tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
DB030363 testis DNAI1.d 20 to 611 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DB081588 testis DNAI1.d 51 to 611 2 to 562   tiling clone, capped   561/561
(100 %)
5 diff
(99.2 %id)
BI560791 testis DNAI1.d 83 to 811 1 to 730 Q133R V176G T177D E178* tiling clone,   730/989
(73 %)
11 diff
(98.9 %id)
TI_44349196   DNAI1.d 88 to 811 86 to 810 Q133R V176G T177D E178*     725/1069
(67 %)
13 diff
(98.8 %id)
CD697982 normal nasopharynx DNAI1.e 1 to 499 31 to 530   tiling clone,   500/530
(94 %)
6 diff
(98.9 %id)
AK302499 testis DNAI1.e 72 to 1396 1 to 1325 exact tiling clone,   1325/1325
(100 %)
1 diff
(100.0 %id)
DC400727 testis DNAI1.e 72 to 550 1 to 479       479/479
(100 %)
0 diff
(100 %id)
BI757662 brain DNAI1.f 1 to 852 1 to 854 E60V L61R K62R E63* tiling clone,   854/854
(100 %)
10 diff
(98.9 %id)
TI_57219284   DNAI1.f 1 to 852 32 to 885 E60V L61R K62R E63*     854/885
(96 %)
16 diff
(98.2 %id)
DC372099   DNAI1.f 470 to 1010 1 to 541   tiling clone,   541/541
(100 %)
0 diff
(100 %id)
AI961552 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors DNAI1.f 1001 to 1364 364 to 1   tiling clone,   364/364
(100 %)
1 diff
(99.8 %id)
DC426382   DNAI1.f 1713 to 2268 557 to 1   tiling clone,   557/557
(100 %)
1 diff
(99.9 %id)
DB457108 testis DNAI1.g-u 1 to 497 1 to 497 A5V H162X A165G tiling clone,   497/497
(100 %)
5 diff
(99.0 %id)
BI090546 cervix DNAI1.h 1 to 851 1 to 848 R111K N117K N118T P119L V120S ... tiling clone,   849/852
(99 %)
15 diff
(98.3 %id)
BX100552 pooled DNAI1.i 1 to 755 1 to 755 exact tiling clone,   755/755
(100 %)
3 diff
(99.7 %id)
DB059090 testis DNAI1.j 1 to 538 2 to 539 exact tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
AI652161 pooled germ cell tumors DNAI1.k 1 to 614 616 to 4 K11Y Y19T S20P S21A Q22N ... tiling clone,   613/616
(99 %)
6 diff
(99.1 %id)
BE504837 pooled germ cell tumors DNAI1.k 55 to 617 563 to 1   tiling clone,   563/563
(100 %)
0 diff
(100 %id)
AW615125 pooled germ cell tumors DNAI1.k 180 to 617 436 to 1       436/494
(88 %)
6 diff
(98.8 %id)
DC414678 trachea DNAI1.l 1 to 543 1 to 543 exact tiling clone,   543/543
(100 %)
0 diff
(100 %id)
DR000751 fetal brain DNAI1.l 40 to 510 9 to 479       471/479
(98 %)
6 diff
(98.8 %id)
DC415757 trachea DNAI1.m 1 to 557 1 to 557 K101R tiling clone,   557/557
(100 %)
1 diff
(99.9 %id)
T91655 lung DNAI1.n-u 1 to 405 1 to 412   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 412/417
(98 %)
8 diff
(98.1 %id)
AL117535 testis DNAI1.n-u 387 to 4958 1 to 4572 exact tiling clone, available from DKFZ, AAA   4572/4572
(100 %)
3 diff
(100.0 %id)
BX114274 carcinoid, lung DNAI1.n-u 3998 to 4473 1 to 476   tiling clone,   476/476
(100 %)
0 diff
(100 %id)
BE550140 carcinoid, lung DNAI1.n-u 4419 to 4957 539 to 1       539/539
(100 %)
1 diff
(99.9 %id)
BE348313 carcinoid, lung DNAI1.n-u 4423 to 4957 535 to 1       535/535
(100 %)
0 diff
(100 %id)
AI306488 carcinoid, lung DNAI1.n-u 4540 to 4957 418 to 1       418/418
(100 %)
0 diff
(100 %id)
AI306489 carcinoid, lung DNAI1.n-u 4640 to 4957 318 to 1       318/318
(100 %)
2 diff
(99.4 %id)
DB227209 trachea DNAI1.o-u 1 to 582 2 to 583 I93M tiling clone, capped   582/582
(100 %)
1 diff
(99.9 %id)
DB446416.
matches multiple genes
testis DNAI1.p 1 to 454 1 to 455 D30H L92S L93W G94A R95G ... tiling clone, also hits gene smaroybu 455/455
(100 %)
5 diff
(99.0 %id)
DB075265 testis DNAI1.q 1 to 536 2 to 537 exact tiling clone, capped   536/536
(100 %)
0 diff
(100 %id)
DB083131 testis DNAI1.q 21 to 583 2 to 564 S45P tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DA453394 tongue, tumor tissue DNAI1.r 1 to 546 2 to 547 exact tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
AA383149 testis DNAI1.s 1 to 240 1 to 240 S26F A55X tiling clone,   240/240
(100 %)
1 diff
(99.6 %id)
AK057687 trachea DNAI1.t-u 1 to 2757 2 to 2756 G68A T70H tiling clone, available from FLJ,   2756/2756
(100 %)
3 diff
(99.9 %id)
DB195559 trachea DNAI1.t-u 1 to 513 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
AA923458 pooled DNAI1.t-u 1990 to 2291 302 to 2       301/302
(99 %)
0 diff
(100 %id)
AA815264   DNAI1.t-u 1991 to 2296 308 to 1       308/308
(100 %)
3 diff
(99.1 %id)
AW149905 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors DNAI1.t-u 2046 to 2288 244 to 1       244/244
(100 %)
2 diff
(99.2 %id)
DB348071 trachea DNAI1.t-u 2220 to 2757 538 to 1       538/538
(100 %)
0 diff
(100 %id)
BF880529 lung_tumor DNAI1.u 1 to 528 534 to 8 S20Y F62H I70L V71C G72A ... tiling clone, Submitted on the opposite strand 527/534
(98 %)
4 diff
(99.3 %id)
AK302186 testis Gene DNAI1, variant not shown         Suspected internal deletion, this clone was ignored    
AK303937 trachea Gene DNAI1, variant not shown         Suspected internal deletion, this clone was ignored    
BM921065 pooled brain, lung, testis Gene DNAI1, variant not shown         This clone was ignored    
DB048490 testis Gene DNAI1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB049369 testis Gene DNAI1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB204260 trachea Gene DNAI1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DC416278 trachea Gene DNAI1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p, .q, .r, .s, .t-u, .u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI