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Gene CCDC150TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
110 supporting clones for gene CCDC150 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001080539.1   .a 1 to 3684 2 to 3685 exact RefSeq,   3685/3685
(100 %)
0 diff
(100 %id)
DB079350 testis .a 71 to 633 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DB147783 thymus .a 71 to 565 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DB261670 uterus .a 72 to 653 2 to 586   tiling clone, capped   585/585
(100 %)
3 diff
(99.5 %id)
AI768804 2 pooled tumors (clear cell type), Kidney .a 3219 to 3675 475 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 457/457
(100 %)
9 diff
(98.1 %id)
AW300223 Kidney .a 3223 to 3679 461 to 5       457/461
(99 %)
0 diff
(100 %id)
BX097009 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3262 to 3670 423 to 15   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 409/409
(100 %)
0 diff
(100 %id)
BF335507 colon .a 3263 to 3621 359 to 1       359/360
(99 %)
10 diff
(97.3 %id)
BF367470 placenta_normal .a 3263 to 3626 368 to 6       363/372
(97 %)
4 diff
(99.0 %id)
BQ318096 colon .a 3267 to 3605 343 to 2       342/344
(99 %)
6 diff
(98.3 %id)
BF335481 colon .a 3268 to 3626 1 to 359       359/375
(95 %)
3 diff
(99.2 %id)
BF335487 colon .a 3268 to 3624 1 to 356       356/362
(98 %)
11 diff
(97.0 %id)
BF335505 colon .a 3268 to 3626 1 to 359       359/363
(98 %)
6 diff
(98.4 %id)
BF335506 colon .a 3268 to 3629 363 to 1       363/363
(100 %)
5 diff
(98.7 %id)
BF335508 colon .a 3268 to 3623 1 to 357       357/376
(94 %)
4 diff
(99.0 %id)
BF335511 colon .a 3268 to 3626 1 to 359       359/371
(96 %)
3 diff
(99.2 %id)
BF379435 uterus_tumor .a 3268 to 3622 356 to 1       356/356
(100 %)
7 diff
(98.1 %id)
BF379436 uterus_tumor .a 3268 to 3603 346 to 4       343/346
(99 %)
2 diff
(99.5 %id)
BF335512 colon .a 3271 to 3626 356 to 2       355/357
(99 %)
5 diff
(98.6 %id)
BF335500 colon .a 3277 to 3626 13 to 361       349/377
(92 %)
8 diff
(97.9 %id)
AI446333 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3284 to 3671 395 to 7   tiling clone,   389/401
(97 %)
1 diff
(99.8 %id)
AI471843 Kidney .a 3296 to 3675 381 to 1       381/381
(100 %)
1 diff
(99.8 %id)
BF379439 uterus_tumor .a 3299 to 3626 1 to 328       328/332
(98 %)
4 diff
(98.8 %id)
BF379446 uterus_tumor .a 3302 to 3626 1 to 329       329/333
(98 %)
10 diff
(97.0 %id)
BF335498 colon .a 3319 to 3626 51 to 357       307/361
(85 %)
3 diff
(99.2 %id)
BF379438 uterus_tumor .a 3319 to 3626 40 to 347       308/351
(87 %)
3 diff
(99.2 %id)
BF379445 uterus_tumor .a 3319 to 3612 15 to 306       292/306
(95 %)
6 diff
(98.1 %id)
BQ380155 uterus_tumor .a 3319 to 3626 27 to 354       328/358
(91 %)
22 diff
(93.9 %id)
AI025053   .a 3319 to 3671 361 to 9       353/365
(96 %)
0 diff
(100 %id)
BQ365721 placenta_normal .a 3424 to 3629 206 to 1       206/206
(100 %)
5 diff
(97.6 %id)
BQ318011 colon .a 3466 to 3626 8 to 174       167/179
(93 %)
15 diff
(91.7 %id)
AK302685 testis .b 1 to 3047 1 to 3047 exact tiling clone,   3047/3047
(100 %)
1 diff
(100.0 %id)
DC401820 testis .b 1 to 575 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
EG328451 pooled .b 538 to 757 1 to 220       220/220
(100 %)
1 diff
(99.6 %id)
BP872039 embryonal kidney .b 1020 to 1599 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
AA608725 lung, lung carcinoma .b 1472 to 1920 1 to 449     Submitted on the opposite strand 449/449
(100 %)
2 diff
(99.6 %id)
DA377992 thalamus .b 1527 to 2152 2 to 627   capped   626/626
(100 %)
1 diff
(99.9 %id)
TI_1948224609   .b 1558 to 1883 121 to 446       326/352
(92 %)
6 diff
(98.3 %id)
TI_1948224610   .b 1558 to 1691 121 to 254       134/160
(83 %)
6 diff
(96.3 %id)
TI_1948224914   .b 1558 to 2232 123 to 805       683/1236
(55 %)
26 diff
(97.9 %id)
TI_1948225248   .b 1558 to 1967 127 to 536       410/436
(94 %)
6 diff
(98.7 %id)
EL735883 mixed .b 1559 to 2140 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CN357757 embryonic stem cells, DMSO-treated H9 cellline .b 2321 to 2989 1 to 669       669/669
(100 %)
1 diff
(99.9 %id)
CX165505 human embryonic stem cells differentiated toan early endodermal cell type .b 2327 to 3042 743 to 28   AAA Submitted on the opposite strand 716/716
(100 %)
3 diff
(99.6 %id)
DB058758 testis .c 1 to 548 2 to 550   tiling clone, capped   549/549
(100 %)
1 diff
(99.9 %id)
BU567316 testis .c 45 to 833 1 to 797   available from MGC,   797/797
(100 %)
14 diff
(98.3 %id)
CD358832 testis .c 47 to 845 1 to 801       801/877
(91 %)
4 diff
(99.6 %id)
BC062658 testis .c 48 to 1379 5 to 1336   available from MGC, AAA   1332/1332
(100 %)
2 diff
(99.9 %id)
AL834537 testis .c 114 to 2659 10 to 2555 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 2546/2546
(100 %)
1 diff
(100.0 %id)
DB339087 testis .c 2134 to 2659 526 to 1       526/526
(100 %)
0 diff
(100 %id)
AK299214   .d 1 to 919 1 to 919   tiling clone,   919/919
(100 %)
0 diff
(100 %id)
DC371105   .d 1 to 566 1 to 566       566/566
(100 %)
0 diff
(100 %id)
AK301665 esophagus, tumor tissue .d 877 to 2091 1 to 1215   tiling clone,   1215/1215
(100 %)
2 diff
(99.9 %id)
DC394080 esophageal, tumor tissue .d 877 to 1412 1 to 536       536/536
(100 %)
0 diff
(100 %id)
TI_1948224913   .d 1254 to 1987 126 to 860       735/1478
(49 %)
20 diff
(98.7 %id)
TI_1948225575   .d 1254 to 1995 129 to 871   fully sequenced, AAA   588/716
(82 %)
75 diff
(89.6 %id)
TI_1948224916   .d 1258 to 1991 856 to 122       735/1359
(54 %)
8 diff
(99.5 %id)
TI_1948225576   .d 1363 to 1991 756 to 126   fully sequenced,   631/756
(83 %)
5 diff
(99.4 %id)
TI_1948224915   .d 1421 to 1991 698 to 124       575/1424
(40 %)
5 diff
(99.7 %id)
TI_1948224611   .d 1652 to 1991 467 to 128   tiling clone,   340/367
(92 %)
1 diff
(99.8 %id)
TI_1948225251   .d 1666 to 1991 437 to 113       325/352
(92 %)
1 diff
(99.8 %id)
TI_1948225250   .d 1670 to 1991 447 to 127       321/348
(92 %)
1 diff
(99.8 %id)
AK096979 small intestine .e 1 to 2112 2 to 2112 R218G E284K E285S L286W E287R ... tiling clone, available from FLJ,   2112/2112
(100 %)
5 diff
(99.8 %id)
DA921193 small intestine .e 1 to 589 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB331927 small intestine .e 1567 to 2112 549 to 1       549/549
(100 %)
4 diff
(99.3 %id)
BC062449 Kidney .f 1 to 1389 5 to 1393 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 1389/1389
(100 %)
3 diff
(99.8 %id)
BG398793 Kidney .f 9 to 644 1 to 640       640/789
(81 %)
16 diff
(98.0 %id)
CB162450 Liver .f 24 to 636 1 to 612   tiling clone,   612/612
(100 %)
2 diff
(99.7 %id)
DA372858 thalamus .f 68 to 614 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
AK125768 testis .g 1 to 2638 2 to 2639 exact tiling clone, available from FLJ,   2639/2639
(100 %)
3 diff
(99.9 %id)
TI_1948224612   .g 1293 to 1489 325 to 129       197/224
(87 %)
0 diff
(100 %id)
AI797563 pooled .g 1417 to 1857 441 to 1       441/443
(99 %)
4 diff
(99.1 %id)
AI825349 pooled germ cell tumors .g 1467 to 1854 388 to 1       388/388
(100 %)
1 diff
(99.8 %id)
AW087412 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .g 1480 to 1902 424 to 1       424/424
(100 %)
2 diff
(99.6 %id)
BF509671   .g 1577 to 1854 295 to 18   AAA   278/278
(100 %)
6 diff
(97.9 %id)
CN357758 embryonic stem cells, cell lines H1, H7, andH9 .g 1597 to 2343 8 to 754       747/754
(99 %)
8 diff
(99.0 %id)
AI203069 pooled germ cell tumors .g 1616 to 1854 239 to 1       239/239
(100 %)
0 diff
(100 %id)
AK096130 Liver .h 1 to 2690 2 to 2690 exact tiling clone, available from FLJ,   2690/2690
(100 %)
1 diff
(100.0 %id)
DA641166 Liver .h 1 to 543 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
BG399505 Kidney .h 11 to 675 1 to 665   available from MGC,   665/667
(99 %)
4 diff
(99.5 %id)
CA776071 Pancreas, Purified pancreatic islet .h 31 to 672 15 to 656       642/656
(97 %)
6 diff
(99.1 %id)
DB321328 Liver .h 2145 to 2690 546 to 1       546/546
(100 %)
0 diff
(100 %id)
DA608979   .i 1 to 569 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
CN417688 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i 16 to 622 1 to 607   tiling clone,   607/607
(100 %)
2 diff
(99.7 %id)
CN417687 embryonic stem cells, cell lines H1, H7, andH9 .i 22 to 462 1 to 441       441/441
(100 %)
0 diff
(100 %id)
CN417686 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i 451 to 1160 1 to 709 exact tiling clone,   709/709
(100 %)
1 diff
(99.9 %id)
AK303236 thymus .j 1 to 1265 2 to 1266 exact tiling clone,   1266/1266
(100 %)
0 diff
(100 %id)
DC406972 thymus .j 1 to 545 2 to 546       546/558
(97 %)
0 diff
(100 %id)
BX343210   .j 14 to 993 1 to 972 Q60N L61*     972/980
(99 %)
18 diff
(98.2 %id)
BX403278   .j 14 to 823 1 to 808 L50X V64X E68G K70R A71H ...     808/854
(94 %)
41 diff
(95.2 %id)
BX370739   .j 724 to 1172 1 to 449       449/449
(100 %)
1 diff
(99.8 %id)
EG328148 pooled .j 799 to 1210 1 to 413       359/413
(86 %)
15 diff
(96.4 %id)
BG210913   .j 1262 to 1873 1 to 608   tiling clone,   608/770
(78 %)
28 diff
(96.4 %id)
BX343209   .j 1332 to 2144 815 to 1   tiling clone,   815/815
(100 %)
5 diff
(99.4 %id)
AK309349 cord Blood .k 1 to 861 1 to 861 exact tiling clone,   861/861
(100 %)
1 diff
(99.9 %id)
DC297200 cord Blood .k 1 to 578 1 to 579 C59X E60*     579/579
(100 %)
1 diff
(99.9 %id)
CB116338 Liver .l 1 to 488 1 to 488 R86K tiling clone,   488/488
(100 %)
5 diff
(99.0 %id)
EG328196 pooled .m 1 to 390 1 to 390 T3L V4S R5E H6T L7* tiling clone,   390/391
(99 %)
13 diff
(96.7 %id)
AA926977 pooled .m 233 to 625 395 to 3   tiling clone,   393/395
(99 %)
0 diff
(100 %id)
BF335494 colon .n 1 to 379 1 to 378 P5R V6L A7Q E8R A9P ... tiling clone,   378/396
(95 %)
3 diff
(99.3 %id)
BF335504 colon .n 52 to 379 37 to 363       327/367
(89 %)
6 diff
(98.4 %id)
BU521851 leiomyosarcoma, uterus .o-u 1 to 695 1 to 701 exact tiling clone,   701/890
(78 %)
7 diff
(99.3 %id)
BX118969 carcinoid, lung .p 1 to 596 1 to 596 exact tiling clone, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 596/596
(100 %)
0 diff
(100 %id)
AI791584 carcinoid, lung .p 22 to 488 1 to 467       467/467
(100 %)
0 diff
(100 %id)
BE672583 carcinoid, lung .p 100 to 599 500 to 1 exact     500/500
(100 %)
0 diff
(100 %id)
BF110432 carcinoid, lung .p 103 to 599 497 to 1 exact     497/497
(100 %)
0 diff
(100 %id)
AI733091 carcinoid, lung .p 118 to 595 478 to 1 exact     478/478
(100 %)
0 diff
(100 %id)
AW470511 carcinoid, lung .p 201 to 596 426 to 31 exact AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 396/396
(100 %)
0 diff
(100 %id)
AA887526 carcinoid, lung .p 230 to 595 366 to 1 exact     366/366
(100 %)
0 diff
(100 %id)
BQ072494 pooled lung and spleen .q 1 to 549 8 to 558 E42K R62K A63S V64C E66R ... tiling clone,   551/1074
(51 %)
12 diff
(98.9 %id)
BF353447 head_neck .r-u 1 to 200 202 to 4 F7S P51T V52S tiling clone,   199/202
(98 %)
0 diff
(100 %id)
AK001064 whole embryo, mainly head Gene CCDC150, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AU145475 whole embryo, mainly head Gene CCDC150, variant not shown         Suspected internal deletion, this clone was ignored    
AU119044 whole embryo, mainly head Gene CCDC150, variant not shown       capped Suspected internal deletion, this clone was ignored    
AV729887 hypothalamus Gene CCDC150, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p, .q, .r-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C