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Gene TMEM186TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
140 supporting clones for gene TMEM186 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF172029 blood .a 1 to 297 5 to 302       302/302
(100 %)
7 diff
(97.7 %id)
BG682191 skin, squamous cell carcinoma .a 1 to 578 5 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
NM_015421.3   .a 1 to 1443 5 to 1447 exact RefSeq, AAA   1447/1447
(100 %)
0 diff
(100 %id)
BM049552 carcinoma, cell line, Prostate .a 1 to 700 2 to 699 F62L D63M A64P I65S R66E ...     699/699
(100 %)
3 diff
(99.6 %id)
DT220820 brain .a 1 to 679 1 to 679 exact     679/679
(100 %)
2 diff
(99.8 %id)
DT220841 brain .a 1 to 697 1 to 697 exact     697/697
(100 %)
2 diff
(99.8 %id)
BU942305 mixed (pool of 40 RNAs) .a 3 to 723 1 to 730 F206V G207W V208G H209T Q210S ...     730/757
(96 %)
12 diff
(98.5 %id)
AK314404 brain .a 6 to 672 1 to 667 exact     667/667
(100 %)
0 diff
(100 %id)
BP283465 bone marrow .a 6 to 587 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BP309861 brain .a 6 to 589 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DA484152 brain .a 7 to 481 2 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
DA494208 brain .a 7 to 533 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA698390   .a 7 to 524 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
AI538473 B-cell, chronic lymphotic leukemia .a 11 to 318 1 to 308     Submitted on the opposite strand 308/308
(100 %)
3 diff
(99.1 %id)
AL080088 brain .a 12 to 1157 5 to 1150 R19G available from DKFZ, AAA   1146/1146
(100 %)
2 diff
(99.9 %id)
CD701242 normal nasopharynx .a 12 to 550 20 to 558       539/558
(96 %)
1 diff
(99.9 %id)
CD688915 normal nasopharynx .a 14 to 480 1 to 469       469/469
(100 %)
4 diff
(99.2 %id)
AK225638 Spleen .a 15 to 1443 1 to 1429 exact AAA   1429/1429
(100 %)
4 diff
(99.8 %id)
BP339316 Spleen .a 15 to 580 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BG339077 leiomyosarcoma cell line, uterus .a 21 to 774 1 to 756 P171L Q172R E173R M174C F175L ...     756/851
(88 %)
16 diff
(98.2 %id)
BC015912 Uterus, leiomyosarcoma .a 22 to 1170 1 to 1149 exact available from MGC, AAA   1149/1149
(100 %)
0 diff
(100 %id)
BX279633 breast, mammary adenocarcinoma, cell line .a 28 to 500 1 to 473       473/473
(100 %)
0 diff
(100 %id)
BF983323 duodenal adenocarcinoma, cell line, small intestine .a 29 to 713 1 to 682       682/682
(100 %)
19 diff
(97.3 %id)
BG574945 breast, mammary adenocarcinoma, cell line .a 29 to 852 1 to 822       822/824
(99 %)
13 diff
(98.5 %id)
CV028589 mixed .a 31 to 671 1 to 642       642/643
(99 %)
3 diff
(99.6 %id)
CR603758 Placenta Cot 25-normalized .a 33 to 1176 1 to 1144   tiling clone,   1144/1144
(100 %)
0 diff
(100 %id)
AL549187 placenta, Placenta Cot 25-normalized .a 33 to 983 1 to 947       947/947
(100 %)
10 diff
(99.0 %id)
BM548411 brain, hippocampus .a 33 to 928 25 to 926       902/1120
(80 %)
0 diff
(100 %id)
TI_1948084060   .a 33 to 447 134 to 548       415/1149
(36 %)
7 diff
(99.4 %id)
BG474576 eye, retinoblastoma .a 38 to 926 1 to 894       894/907
(98 %)
32 diff
(96.5 %id)
BM470032 melanotic melanoma, skin .a 45 to 826 1 to 793       793/1042
(76 %)
15 diff
(98.6 %id)
R29393   .a 49 to 305 1 to 256       256/256
(100 %)
2 diff
(99.3 %id)
BM018660 astrocytoma grade IV, cell line, brain .a 153 to 1003 1 to 847       847/848
(99 %)
25 diff
(97.1 %id)
AA337179 endometrium .a 154 to 447 1 to 296       296/296
(100 %)
3 diff
(99.0 %id)
TI_59389326   .a 154 to 1003 101 to 946       846/847
(99 %)
25 diff
(97.1 %id)
AW966215   .a 155 to 716 1 to 566       566/566
(100 %)
11 diff
(98.1 %id)
BM549679 astrocytoma grade IV, cell line, brain .a 156 to 828 1 to 674       674/1010
(66 %)
17 diff
(98.4 %id)
BM908959 astrocytoma grade IV, cell line, brain .a 157 to 860 1 to 706       706/1118
(63 %)
28 diff
(97.5 %id)
TI_1948084885   .a 157 to 678 648 to 121       528/1098
(48 %)
0 diff
(100 %id)
BE077542 breast .a 174 to 739 21 to 588       568/672
(84 %)
12 diff
(98.3 %id)
BE792162 lung, small cell carcinoma .a 174 to 953 1 to 778       778/919
(84 %)
9 diff
(99.1 %id)
BE077536 breast .a 176 to 739 25 to 586       562/644
(87 %)
11 diff
(98.3 %id)
BF793175 adrenal cortex carcinoma, cell line, adrenal gland .a 186 to 971 1 to 785       785/906
(86 %)
25 diff
(97.3 %id)
CA495332   .a 197 to 1030 28 to 868       841/916
(91 %)
21 diff
(97.8 %id)
BU168186 melanotic melanoma, cell line, skin .a 199 to 962 27 to 795       769/971
(79 %)
20 diff
(98.0 %id)
TI_149308309   .a 200 to 827 712 to 85   AAA   628/967
(64 %)
0 diff
(100 %id)
TI_149308703   .a 200 to 827 716 to 89   AAA   628/958
(65 %)
0 diff
(100 %id)
BU687159 lung, Primary Lung Epithelial Cells .a 200 to 827 646 to 19   AAA   628/644
(97 %)
0 diff
(100 %id)
BM979870 lung, Primary Lung Epithelial Cells .a 200 to 827 646 to 19   AAA   628/636
(98 %)
0 diff
(100 %id)
BE379281 endometrium, adenocarcinoma cell line, uterus .a 212 to 907 8 to 701       694/702
(98 %)
19 diff
(97.3 %id)
TI_154107236   .a 276 to 1157 968 to 98   AAA   871/950
(91 %)
20 diff
(97.9 %id)
CD675781 eye, lens .a 304 to 712 1 to 409       409/409
(100 %)
0 diff
(100 %id)
AI834295 head_neck .a 317 to 529 1 to 213       213/213
(100 %)
1 diff
(99.6 %id)
AW387077 stomach .a 330 to 865 1 to 537       537/537
(100 %)
24 diff
(95.6 %id)
AW387076 stomach .a 341 to 791 497 to 42       456/501
(91 %)
0 diff
(100 %id)
AW387112 stomach .a 392 to 995 611 to 6       606/611
(99 %)
0 diff
(100 %id)
AW062873 stomach .a 406 to 1002 596 to 3       594/596
(99 %)
0 diff
(100 %id)
BF374333 stomach .a 427 to 960 542 to 7       536/542
(98 %)
0 diff
(100 %id)
EC526538 Prostate .a 446 to 542 1 to 96       96/96
(100 %)
7 diff
(92.8 %id)
CA447000 Chondrosarcoma, Left Pubic Bone .a 473 to 1157 703 to 19   AAA   685/685
(100 %)
1 diff
(99.9 %id)
BQ362527 stomach .a 490 to 956 490 to 24       467/494
(94 %)
0 diff
(100 %id)
BF940711 fibrotheoma, ovary .a 518 to 667 151 to 1       151/154
(98 %)
14 diff
(91.0 %id)
BF057469 fibrotheoma, ovary .a 530 to 1171 644 to 2       643/690
(93 %)
0 diff
(100 %id)
FN095714 breast carcinoma .a 557 to 645 88 to 1     Submitted on the opposite strand 88/92
(95 %)
1 diff
(99.0 %id)
TI_57179531   .a 576 to 1174 70 to 668   AAA   599/668
(89 %)
0 diff
(100 %id)
BI769832 pooled lung and spleen .a 577 to 1174 1 to 598   AAA   598/598
(100 %)
1 diff
(99.9 %id)
AA143269 Pancreas .a 580 to 1158 582 to 1       582/585
(99 %)
7 diff
(98.9 %id)
AW003145 pooled germ cell tumors .a 589 to 1171 583 to 1       583/583
(100 %)
1 diff
(99.9 %id)
AI680876 carcinoid, lung .a 591 to 1176 587 to 2       586/587
(99 %)
0 diff
(100 %id)
AI870524 anaplastic oligodendroglioma, brain .a 592 to 1157 566 to 1       566/566
(100 %)
0 diff
(100 %id)
FN143246 breast carcinoma .a 593 to 685 91 to 1     Submitted on the opposite strand 91/92
(98 %)
5 diff
(94.6 %id)
AW294158   .a 605 to 1170 584 to 18   AAA   567/567
(100 %)
2 diff
(99.7 %id)
FN169426 breast carcinoma .a 658 to 771 1 to 111       111/111
(100 %)
4 diff
(96.4 %id)
EC502628 Prostate .a 675 to 772 1 to 98       98/120
(81 %)
0 diff
(100 %id)
BE645549 Prostate .a 676 to 1174 499 to 1       499/499
(100 %)
0 diff
(100 %id)
FN167501 breast carcinoma .a 677 to 798 116 to 1     Submitted on the opposite strand 116/116
(100 %)
5 diff
(95.7 %id)
BF590932 colon, colon tumor, RER+ .a 679 to 1164 486 to 1       486/486
(100 %)
4 diff
(99.2 %id)
AA631314 colon, colon tumor RER+ .a 689 to 1157 470 to 1       470/472
(99 %)
3 diff
(99.4 %id)
AW043574 pooled .a 691 to 1158 468 to 1       468/468
(100 %)
1 diff
(99.8 %id)
AW197085 pooled germ cell tumors .a 694 to 1170 490 to 14   AAA   477/477
(100 %)
1 diff
(99.8 %id)
AA121831   .a 700 to 1110 421 to 1     Submitted on the opposite strand 421/424
(99 %)
11 diff
(97.5 %id)
AI018346 pooled .a 703 to 1164 462 to 1       462/462
(100 %)
1 diff
(99.8 %id)
AA136622   .a 707 to 1110 407 to 1     Submitted on the opposite strand 407/407
(100 %)
6 diff
(98.6 %id)
AI985342 Kidney .a 707 to 1172 466 to 1       466/466
(100 %)
2 diff
(99.6 %id)
CN306408 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 712 to 1133 422 to 1     Submitted on the opposite strand 422/422
(100 %)
6 diff
(98.6 %id)
AW778902 colon, moderately-differentiated adenocarcinoma .a 714 to 1101 388 to 1       388/388
(100 %)
1 diff
(99.8 %id)
BE676531 B-cell, chronic lymphotic leukemia .a 718 to 1162 456 to 12       445/456
(97 %)
0 diff
(100 %id)
AA973282 pooled .a 724 to 1164 443 to 3       441/443
(99 %)
0 diff
(100 %id)
AI220100 pooled .a 724 to 1164 443 to 3       441/443
(99 %)
0 diff
(100 %id)
AA883089 pooled .a 737 to 1164 428 to 1       428/428
(100 %)
1 diff
(99.8 %id)
AI939929 breast .a 748 to 1023 1 to 276       276/276
(100 %)
3 diff
(99.0 %id)
BF590887 colon, colon tumor, RER+ .a 749 to 1174 440 to 15   AAA   426/426
(100 %)
1 diff
(99.8 %id)
AI220343 pooled .a 758 to 1164 409 to 3       407/409
(99 %)
0 diff
(100 %id)
AW008805 colon .a 773 to 1172 399 to 1       399/399
(100 %)
2 diff
(99.5 %id)
AI834291 head_neck .a 779 to 1004 225 to 1       225/236
(95 %)
4 diff
(98.4 %id)
BX389648 Placenta Cot 25-normalized .a 790 to 1176 1 to 386       386/386
(100 %)
3 diff
(99.3 %id)
BX389647 Placenta Cot 25-normalized .a 791 to 1176 1 to 384       384/384
(100 %)
3 diff
(99.3 %id)
AW339898 pooled .a 795 to 1168 385 to 12   AAA   374/374
(100 %)
1 diff
(99.8 %id)
AA706193   .a 807 to 1172 366 to 1       366/366
(100 %)
2 diff
(99.5 %id)
TI_154090402   .a 809 to 1443 716 to 87   tiling clone, AAA   630/868
(72 %)
13 diff
(98.6 %id)
AI141070 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 824 to 1171 349 to 2       348/349
(99 %)
0 diff
(100 %id)
BF057475 fibrotheoma, ovary .a 841 to 1171 335 to 2       334/335
(99 %)
0 diff
(100 %id)
AW175818 breast .a 848 to 1052 1 to 206       206/206
(100 %)
4 diff
(98.1 %id)
AA621611   .a 858 to 1160 303 to 1       303/303
(100 %)
0 diff
(100 %id)
AI620636 Prostate .a 867 to 1170 317 to 14   AAA   304/304
(100 %)
13 diff
(95.8 %id)
BE465201 Kidney .a 875 to 1164 288 to 1       288/288
(100 %)
2 diff
(99.4 %id)
AW614310 Kidney .a 905 to 1137 235 to 1       235/246
(95 %)
4 diff
(98.4 %id)
CA433910 mixed .a 956 to 1443 506 to 19   AAA   488/488
(100 %)
0 diff
(100 %id)
BU565645 mixed (pool of 40 RNAs) .a 1007 to 1175 1 to 169       169/206
(82 %)
1 diff
(99.6 %id)
BE896794 melanotic melanoma, skin .a 1118 to 1819 1 to 703   tiling clone,   703/839
(83 %)
28 diff
(96.7 %id)
AA323420 brain, cerebellum .a 1252 to 1669 1 to 423   tiling clone,   423/423
(100 %)
7 diff
(98.4 %id)
AK093383 testis .b-u 1 to 2294 2 to 2294   tiling clone, available from FLJ,   2294/2294
(100 %)
4 diff
(99.9 %id)
DB034037 testis .b-u 1 to 555 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
BE256784 eye, retinoblastoma .b-u 121 to 613 1 to 492       492/494
(99 %)
4 diff
(99.2 %id)
DA643933   .b-u 123 to 644 2 to 522   capped   521/521
(100 %)
4 diff
(99.3 %id)
DA160717 amygdala .b-u 125 to 696 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA557830   .b-u 125 to 707 2 to 583   capped   582/582
(100 %)
4 diff
(99.4 %id)
DA956333 Spleen .b-u 125 to 691 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
DA999379 breast, tumor tissue .b-u 125 to 655 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
DB059443 testis .b-u 125 to 614 2 to 491   capped   490/490
(100 %)
3 diff
(99.4 %id)
DA930964 small intestine .b-u 134 to 644 2 to 511   capped   510/510
(100 %)
2 diff
(99.7 %id)
DB124866 thymus .b-u 134 to 609 2 to 476   capped   475/475
(100 %)
3 diff
(99.4 %id)
DA288501 corpus callosum .b-u 135 to 708 2 to 577   capped   576/576
(100 %)
6 diff
(99.0 %id)
BX335286 Placenta Cot 25-normalized .b-u 139 to 1227 1 to 1078   fully sequenced,   1078/1078
(100 %)
20 diff
(98.2 %id)
DB055807 testis .b-u 150 to 700 2 to 551   capped   550/550
(100 %)
5 diff
(99.1 %id)
AA121832   .b-u 744 to 1186 1 to 444     Submitted on the opposite strand 444/444
(100 %)
6 diff
(98.7 %id)
AA136584   .b-u 753 to 1044 1 to 293     Submitted on the opposite strand 293/407
(71 %)
3 diff
(99.3 %id)
CF147376 CNCAP(3)T-225 cell line, Prostate .b-u 896 to 1608 8 to 720   tiling clone,   713/720
(99 %)
0 diff
(100 %id)
CF147413 CNCAP(3)T-225 cell line, Prostate .b-u 896 to 1464 8 to 576       569/576
(98 %)
0 diff
(100 %id)
TI_154180002   .b-u 896 to 1721 77 to 892       816/896
(91 %)
28 diff
(96.9 %id)
TI_154180043   .b-u 896 to 1627 70 to 793       724/893
(81 %)
20 diff
(97.8 %id)
CF141640 CNCAP(3)T-225 cell line, Prostate .b-u 1107 to 1569 4 to 466       463/466
(99 %)
0 diff
(100 %id)
TI_154172449   .b-u 1110 to 1690 79 to 659       581/581
(100 %)
6 diff
(99.0 %id)
BX335285 Placenta Cot 25-normalized .b-u 1221 to 2276 1041 to 1 F2* tiling clone, fully sequenced,   1041/1041
(100 %)
20 diff
(98.1 %id)
DB337282 testis .b-u 1750 to 2294 545 to 1       545/545
(100 %)
1 diff
(99.9 %id)
DB166643 kidney, tumor tissue .c 1 to 563 2 to 565 E13* tiling clone, capped   564/564
(100 %)
4 diff
(99.3 %id)
AI824644 Prostate Gene TMEM186, variant not shown         This clone was ignored    
BE646278 Prostate Gene TMEM186, variant not shown         This clone was ignored    
CB051399 Prostate Gene TMEM186, variant not shown         Suspected internal deletion, this clone was ignored    
CB054780 brain, glioblastoma (pooled) Gene TMEM186, variant not shown         This clone was ignored    
CB054781 brain, glioblastoma (pooled) Gene TMEM186, variant not shown         This clone was ignored    
BF001192 Prostate Gene TMEM186, variant not shown         This clone was ignored    
BF002758 Prostate Gene TMEM186, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C