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Gene VOPP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
250 supporting clones for gene VOPP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI597655.
matches multiple genes
brain, hypothalamus .a 1 to 761 7 to 776 exact tiling clone, also hits gene tosimo 776/977
(79 %)
26 diff
(97.4 %id)
BI597486 brain, hypothalamus .a 1 to 855 7 to 862 E121S C122V G123A L124C A126P ... tiling clone,   862/924
(93 %)
39 diff
(95.8 %id)
TI_45212380   .a 1 to 855 92 to 947 E121S C122V G123A L124C A126P ...     857/1009
(84 %)
41 diff
(96.0 %id)
DB503804.
matches multiple genes
hypothalamus .a 3 to 483 1 to 481     also hits gene tosimo 481/481
(100 %)
0 diff
(100 %id)
DB504266.
matches multiple genes
hypothalamus .a 3 to 486 1 to 484     also hits gene tosimo 484/484
(100 %)
0 diff
(100 %id)
DB506699.
matches multiple genes
hypothalamus .a 3 to 474 1 to 472     also hits gene tosimo 472/472
(100 %)
0 diff
(100 %id)
DB475432 hippocampus .b 1 to 462 1 to 462       462/462
(100 %)
2 diff
(99.6 %id)
DB496308 hypothalamus .b 1 to 467 1 to 467   tiling clone,   467/471
(99 %)
4 diff
(99.2 %id)
NM_030796.3   .b 19 to 2961 1 to 2943 exact RefSeq, AAA   2943/2943
(100 %)
0 diff
(100 %id)
DB457120 testis .b 35 to 522 1 to 488       488/488
(100 %)
0 diff
(100 %id)
AK225755 Spleen .b 61 to 786 1 to 726 exact     726/726
(100 %)
5 diff
(99.4 %id)
DA444141 tongue, tumor tissue .b 65 to 255 2 to 192   capped   191/274
(69 %)
1 diff
(99.7 %id)
DB477746 hippocampus .b 70 to 549 1 to 479       479/485
(98 %)
4 diff
(99.2 %id)
DA577487   .b 70 to 468 2 to 400   capped   399/399
(100 %)
0 diff
(100 %id)
AK075391   .b 72 to 2961 1 to 2890 A111T tiling clone,   2890/2890
(100 %)
3 diff
(99.9 %id)
AL558370 T cells from T cell leukemia .b 74 to 1067 1 to 985 R3Q Q4L P5R A6R K7W ...     985/985
(100 %)
14 diff
(98.6 %id)
DA145627 amygdala .b 86 to 391 2 to 307   capped   306/306
(100 %)
0 diff
(100 %id)
DB474324 hippocampus .b 88 to 576 1 to 489       489/489
(100 %)
1 diff
(99.8 %id)
DB127223 thymus .b 99 to 634 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB147148 thymus .b 108 to 685 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA703525   .b 109 to 560 2 to 453   capped   452/452
(100 %)
0 diff
(100 %id)
DA086643 cerebellum .b 112 to 682 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA748494   .b 112 to 488 2 to 378   capped   377/377
(100 %)
0 diff
(100 %id)
DB131407 thymus .b 112 to 661 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
AK314338 synovial membrane tissue from rheumatoidarthritis .b 113 to 720 1 to 608 exact     608/608
(100 %)
1 diff
(99.9 %id)
BC016650 Lymph, lymphoma .b 114 to 2961 1 to 2847 exact tiling clone, available from MGC, AAA   2847/2847
(100 %)
3 diff
(99.9 %id)
DA438066 tongue, tumor tissue .b 114 to 658 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA576119   .b 114 to 667 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA592930 lung .b 114 to 590 2 to 478   capped   477/477
(100 %)
0 diff
(100 %id)
DA631224 Kidney .b 114 to 687 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA655420   .b 114 to 675 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA819896   .b 114 to 638 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA866144 Prostate .b 114 to 620 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
DB112707 thymus .b 114 to 663 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB128178 thymus .b 114 to 684 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB132323 thymus .b 114 to 638 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DB135860 thymus .b 114 to 576 2 to 464   capped   463/463
(100 %)
0 diff
(100 %id)
DB260052 uterus .b 114 to 684 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BX388115   .b 122 to 1044 1 to 919 R2A R3P Q4A P5X A6E ...     919/919
(100 %)
12 diff
(98.7 %id)
DA738172   .b 126 to 832 2 to 712 P163X capped   711/805
(88 %)
7 diff
(99.2 %id)
DA736435   .b 134 to 904 2 to 771 exact capped   770/773
(99 %)
8 diff
(99.0 %id)
BU161897.
matches multiple genes
eye, retinoblastoma .b 139 to 959 17 to 840 exact   also hits gene tosimo 824/856
(96 %)
12 diff
(98.6 %id)
AB097004 lung .b 147 to 2961 1 to 2815 exact     2815/2815
(100 %)
5 diff
(99.9 %id)
DB130849 thymus .b 147 to 709 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA051565   .b 148 to 704 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA452292 tongue, tumor tissue .b 148 to 741 2 to 595 exact capped   594/594
(100 %)
0 diff
(100 %id)
DA619094   .b 148 to 691 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA884166   .b 148 to 703 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
AL559143 T cells from T cell leukemia .b 152 to 1011 23 to 877 R2A R3S Q4C P5E A6G ...     855/877
(97 %)
12 diff
(98.7 %id)
DB129623 thymus .b 167 to 708 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA294453 hippocampus .b 177 to 762 2 to 587 exact capped   586/586
(100 %)
0 diff
(100 %id)
DA392340 thalamus .b 177 to 768 2 to 593 exact capped   592/592
(100 %)
0 diff
(100 %id)
AA021160 eye, retina .b 178 to 614 1 to 444       441/445
(99 %)
22 diff
(95.1 %id)
DA700115   .b 179 to 674 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
DA876773 Prostate .b 187 to 751 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
AL136610 brain .b 196 to 2961 4 to 2769 M134T available from DKFZ, AAA   2766/2766
(100 %)
7 diff
(99.8 %id)
CR533483   .b 202 to 830 1 to 629 E92K M134T     629/629
(100 %)
3 diff
(99.6 %id)
BQ440008 eye, retinoblastoma .b 209 to 1021 1 to 819       819/886
(92 %)
10 diff
(98.9 %id)
DA883212   .b 232 to 782 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AF395824   .b 241 to 2961 1 to 2721       2721/2721
(100 %)
1 diff
(100.0 %id)
BQ185504.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 250 to 906 675 to 19   AAA also hits gene tosimo 657/710
(92 %)
3 diff
(99.6 %id)
TI_154186637   .b 255 to 995 44 to 784       741/742
(99 %)
7 diff
(99.1 %id)
DA704461   .b 277 to 782 2 to 507   capped   506/506
(100 %)
0 diff
(100 %id)
BM555009 duodenal adenocarcinoma, cell line, small intestine .b 344 to 1267 1 to 925       925/983
(94 %)
14 diff
(98.6 %id)
DA695819   .b 370 to 939 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA718267.
matches multiple genes
  .b 388 to 961 2 to 576   tiling clone, capped also hits gene tosimo 575/575
(100 %)
3 diff
(99.5 %id)
DA753955.
matches multiple genes
  .b 389 to 930 2 to 544   capped also hits gene tosimo 543/543
(100 %)
4 diff
(99.3 %id)
BX956224   .b 400 to 1146 1 to 749       749/749
(100 %)
8 diff
(99.0 %id)
CX867087 embryonic stem .b 574 to 1310 1 to 737       737/737
(100 %)
0 diff
(100 %id)
BG171717.
matches multiple genes
hypernephroma, cell line, Kidney .b 723 to 1471 1 to 747   tiling clone, also hits gene tosimo 747/981
(76 %)
19 diff
(98.1 %id)
DA931539 Spleen .b 733 to 1298 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BM720180.
matches multiple genes
eye, fetal eye .b 741 to 1212 1 to 471     also hits gene tosimo 471/471
(100 %)
1 diff
(99.8 %id)
BQ929429 leiomyosarcoma, uterus .b 750 to 1648 41 to 941       901/962
(93 %)
11 diff
(98.9 %id)
BE873119.
matches multiple genes
adenocarcinoma, colon .b 773 to 1405 1 to 635   tiling clone, also hits gene tosimo 635/867
(73 %)
7 diff
(99.2 %id)
DB179283 kidney, tumor tissue .b 779 to 1320 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BQ421973 epithelioid carcinoma, Pancreas .b 784 to 1644 1 to 864       864/866
(99 %)
13 diff
(98.5 %id)
DA560938 heart .b 787 to 1343 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA934331 Spleen .b 789 to 1361 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CN299443 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 793 to 1284 1 to 492       492/492
(100 %)
0 diff
(100 %id)
BU630500 cell lines, Chondrosarcoma .b 798 to 1503 722 to 17   AAA   706/707
(99 %)
2 diff
(99.8 %id)
BU178749 eye, retinoblastoma .b 815 to 1648 1 to 839       839/886
(94 %)
8 diff
(99.1 %id)
CV802120 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 842 to 1545 1 to 695       695/826
(84 %)
12 diff
(98.6 %id)
BF795642 lymph, lymphoma, cell line .b 869 to 1639 1 to 766       766/769
(99 %)
9 diff
(98.9 %id)
CX163283 human embryonic stem cells differentiated toan early endodermal cell type .b 869 to 1686 1 to 817       817/817
(100 %)
2 diff
(99.8 %id)
DA548434   .b 875 to 1343 2 to 470   capped   469/469
(100 %)
0 diff
(100 %id)
CD107342 brain, Pituitary .b 876 to 1730 1 to 858       858/858
(100 %)
5 diff
(99.5 %id)
DB125022 thymus .b 891 to 1455 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BP265310 thyroid .b 924 to 1504 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CD632789   .b 934 to 1728 804 to 9       796/804
(99 %)
0 diff
(100 %id)
BF344299 brain, glioblastoma with EGFR amplification .b 1018 to 1769 1 to 746       746/760
(98 %)
12 diff
(98.5 %id)
CN299437 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1040 to 1463 1 to 424       424/424
(100 %)
0 diff
(100 %id)
BG110428 Bone, osteosarcoma, cell line .b 1081 to 1836 1 to 750       750/920
(81 %)
29 diff
(96.9 %id)
BF663359 B-cells, primary B-cells from tonsils (cell line) .b 1112 to 1861 1 to 747       747/1025
(72 %)
23 diff
(97.8 %id)
BF359736.
matches multiple genes
marrow .b 1132 to 1457 1 to 326   tiling clone, also hits gene tosimo 326/326
(100 %)
0 diff
(100 %id)
TI_57167728   .b 1236 to 2048 49 to 865       817/866
(94 %)
15 diff
(98.3 %id)
BI834547 pooled pancreas and spleen .b 1246 to 2048 1 to 807       807/808
(99 %)
11 diff
(98.7 %id)
CD108849 brain, Pituitary .b 1252 to 2083 1 to 835       835/846
(98 %)
9 diff
(99.0 %id)
DA969969 stomach .b 1274 to 1844 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BP255723 Kidney .b 1286 to 1866 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BI255411 cervical carcinoma cell line, cervix .b 1322 to 2090 1 to 775       775/917
(84 %)
14 diff
(98.5 %id)
BX329217   .b 1349 to 2305 959 to 1       959/959
(100 %)
28 diff
(97.1 %id)
DA357765 subthalamic nucleus .b 1353 to 1925 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA357778 subthalamic nucleus .b 1353 to 1914 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
CD518325 White Matter .b 1410 to 2223 1 to 824       824/833
(98 %)
18 diff
(97.9 %id)
BP348330 brain .b 1454 to 2036 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA690114   .b 1460 to 2004 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
BQ232964 epithelioid carcinoma, Pancreas .b 1469 to 2233 1 to 769       769/770
(99 %)
5 diff
(99.4 %id)
BU507685 leiomyosarcoma, uterus .b 1471 to 2095 1 to 627       627/809
(77 %)
3 diff
(99.7 %id)
AL580210 T cells from T cell leukemia .b 1861 to 2926 1060 to 1       1060/1066
(99 %)
9 diff
(99.2 %id)
BX388114   .b 1956 to 2951 995 to 1       995/995
(100 %)
8 diff
(99.2 %id)
BM671939.
matches multiple genes
eye, fetal eye .b 2247 to 2961 731 to 19   AAA also hits gene tosimo 713/713
(100 %)
3 diff
(99.6 %id)
DB368910   .b 2446 to 2961 517 to 1       517/524
(98 %)
5 diff
(99.1 %id)
DB370773   .b 2480 to 2961 481 to 1       481/482
(99 %)
9 diff
(98.2 %id)
DA814621   .c 1 to 483 2 to 485   tiling clone, capped   484/484
(100 %)
1 diff
(99.8 %id)
DA816986   .c 4 to 553 2 to 552 F26L R50X A51G L52P S53L ... capped   551/551
(100 %)
4 diff
(99.3 %id)
AK315882 cord Blood .c 7 to 1406 1 to 1400 exact tiling clone,   1400/1400
(100 %)
0 diff
(100 %id)
DA462927   .c 8 to 539 2 to 534 R50X A51G L52P S53L I54H ... capped   533/533
(100 %)
1 diff
(99.9 %id)
BM807307 brain, hippocampus .c 23 to 960 17 to 962       946/1094
(86 %)
33 diff
(97.0 %id)
DA210249 brain .d 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
BP343994 synovial membrane .d 145 to 722 1 to 581       581/581
(100 %)
24 diff
(95.9 %id)
DA566865 heart .d 170 to 736 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA645445   .d 170 to 736 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA923366 small intestine .d 170 to 751 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB157518 thymus .d 170 to 656 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DB160756 thymus .d 170 to 692 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA468926   .d 195 to 772 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA681539 ovary .d 209 to 784 2 to 578   tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
DA253067 caudate nucleus .d 216 to 793 2 to 579 R83* capped   578/578
(100 %)
1 diff
(99.9 %id)
DA396595 thalamus .d 218 to 814 2 to 598 R83* tiling clone, capped   597/597
(100 %)
2 diff
(99.7 %id)
AK090825 amygdala .e 1 to 2865 2 to 2866 exact tiling clone, available from FLJ,   2866/2866
(100 %)
1 diff
(100.0 %id)
AX746636   .e 1 to 2865 2 to 2866 exact     2866/2866
(100 %)
1 diff
(100.0 %id)
DA147679 amygdala .e 1 to 567 2 to 568   capped   567/571
(99 %)
1 diff
(99.9 %id)
CD108757 brain, Pituitary .e 1398 to 2213 1 to 822       822/879
(93 %)
7 diff
(99.3 %id)
TI_154188446   .e 1399 to 2122 121 to 843       723/933
(77 %)
58 diff
(93.8 %id)
DR155916 human embryonic stem cells differentiated toan early endodermal cell type .e 1478 to 2209 1 to 732       732/732
(100 %)
0 diff
(100 %id)
TI_154188757   .e 1480 to 2272 122 to 902       781/927
(84 %)
16 diff
(98.3 %id)
BQ267701.
matches multiple genes
insulinoma, Pancreas .e 1530 to 1974 1 to 445     also hits gene teerobu 445/445
(100 %)
4 diff
(99.2 %id)
BQ581280 insulinoma, Pancreas .e 1530 to 2122 1 to 593       593/593
(100 %)
4 diff
(99.4 %id)
BU069571.
matches multiple genes
insulinoma, Pancreas .e 1530 to 2003 1 to 475     also hits gene teerobu 475/475
(100 %)
8 diff
(98.4 %id)
BU075788.
matches multiple genes
insulinoma, Pancreas .e 1530 to 2101 1 to 572     also hits gene teerobu 572/572
(100 %)
4 diff
(99.4 %id)
BU948300 insulinoma, Pancreas .e 1530 to 1970 1 to 441       441/441
(100 %)
4 diff
(99.1 %id)
BG696226 skin .e 1540 to 2310 1 to 770       770/770
(100 %)
1 diff
(99.9 %id)
CV816550 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 1541 to 2403 1 to 866       866/882
(98 %)
31 diff
(96.5 %id)
BF342571 brain, glioblastoma with EGFR amplification .e 1624 to 2375 1 to 749       749/936
(80 %)
21 diff
(97.8 %id)
BF338736 brain, glioblastoma with EGFR amplification .e 1624 to 2431 1 to 799       799/800
(99 %)
19 diff
(97.7 %id)
BQ638556 eye, retina .e 1647 to 2287 4 to 644       641/644
(99 %)
6 diff
(99.1 %id)
CN299435 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1682 to 2447 1 to 766       766/766
(100 %)
2 diff
(99.8 %id)
BF933082 nervous_tumor .e 1690 to 2015 326 to 1     Submitted on the opposite strand 326/326
(100 %)
0 diff
(100 %id)
BM511165 insulinoma, Pancreas .e 1708 to 2204 1 to 497       497/497
(100 %)
3 diff
(99.4 %id)
CK823795 insulinoma, Pancreas .e 1708 to 2261 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
BQ549795 insulinoma, Pancreas .e 1708 to 2195 1 to 488       488/488
(100 %)
3 diff
(99.4 %id)
BG110964 Bone, osteosarcoma, cell line .e 1712 to 2481 1 to 769       769/929
(82 %)
19 diff
(98.0 %id)
CN299434 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 1721 to 2072 1 to 352       352/352
(100 %)
0 diff
(100 %id)
BI256250 cervical carcinoma cell line, cervix .e 1733 to 2505 1 to 775       775/947
(81 %)
12 diff
(98.8 %id)
BX284094 skin, squamous cell carcinoma .e 1743 to 2226 1 to 484       484/484
(100 %)
0 diff
(100 %id)
BG678931 skin, squamous cell carcinoma .e 1743 to 2581 1 to 836       836/836
(100 %)
3 diff
(99.7 %id)
CF596309 Stomach, adenocarcinoma .e 1743 to 2493 1 to 753       753/757
(99 %)
10 diff
(98.7 %id)
BG113392 Bone, osteosarcoma, cell line .e 1749 to 2525 1 to 767       767/966
(79 %)
27 diff
(97.3 %id)
AK000539   .e 1750 to 2865 1 to 1116   available from FLJ, AAA   1116/1116
(100 %)
1 diff
(100.0 %id)
BQ638915 eye, retina .e 1769 to 2386 1 to 618       618/618
(100 %)
0 diff
(100 %id)
BQ637501 eye, retina .e 1848 to 2474 1 to 627       627/627
(100 %)
0 diff
(100 %id)
BM711278 eye, fetal eyes .e 1853 to 2242 1 to 390   fully sequenced,   390/390
(100 %)
1 diff
(99.8 %id)
BX340957.
matches multiple genes
  .e 1895 to 2831 935 to 1     also hits gene tosimo 935/935
(100 %)
5 diff
(99.5 %id)
AL580828 T cells from T cell leukemia .e 1901 to 2802 907 to 1       907/907
(100 %)
19 diff
(98.0 %id)
BF802896 colon_ins .e 1911 to 2325 415 to 1     Submitted on the opposite strand 415/415
(100 %)
0 diff
(100 %id)
BF806737 colon_ins .e 1911 to 2307 1 to 397       397/397
(100 %)
0 diff
(100 %id)
BF339610 brain, glioblastoma with EGFR amplification .e 1942 to 2740 1 to 794       794/872
(91 %)
22 diff
(97.5 %id)
BF094249 uterus_tumor .e 1956 to 2134 9 to 187       179/196
(91 %)
7 diff
(96.5 %id)
TI_149299011   .e 1982 to 2865 955 to 84   AAA   872/978
(89 %)
10 diff
(99.0 %id)
BM708399.
matches multiple genes
eye, RPE and Choroid .e 1990 to 2373 1 to 384     also hits gene teerobu 384/384
(100 %)
0 diff
(100 %id)
W47511.
matches multiple genes
senescent fibroblast .e 1999 to 2309 1 to 311     also hits gene teerobu 311/314
(99 %)
1 diff
(99.7 %id)
TI_149315386   .e 2008 to 2865 922 to 80   AAA   843/971
(86 %)
18 diff
(98.2 %id)
BI196951 brain, neuroblastoma .e 2022 to 2866 1 to 843       843/893
(94 %)
19 diff
(97.9 %id)
TI_149302443   .e 2046 to 2865 879 to 72   AAA   808/956
(84 %)
17 diff
(98.3 %id)
TI_149313229   .e 2046 to 2865 912 to 105   AAA   808/943
(85 %)
21 diff
(97.8 %id)
BQ101012 Islets of Langerhans, Pancreas .e 2099 to 2610 1 to 512       512/512
(100 %)
0 diff
(100 %id)
TI_154123598   .e 2099 to 2865 840 to 87   AAA   754/977
(77 %)
20 diff
(98.0 %id)
TI_154131363   .e 2099 to 2865 869 to 106   AAA   764/972
(78 %)
8 diff
(99.2 %id)
W68195 heart .e 2114 to 2454 1 to 341   fully sequenced,   341/341
(100 %)
0 diff
(100 %id)
CR606724 thymus .e 2121 to 2864 1 to 744       744/744
(100 %)
0 diff
(100 %id)
BX456854 thymus .e 2121 to 2854 1 to 734   fully sequenced,   734/734
(100 %)
2 diff
(99.8 %id)
AA082143.
matches multiple genes
  .e 2122 to 2586 1 to 466     also hits gene teerobu 466/467
(99 %)
2 diff
(99.6 %id)
TI_149301819   .e 2127 to 2865 826 to 88   AAA   739/938
(78 %)
5 diff
(99.5 %id)
AW328066 Burkitt lymphoma, lymph .e 2141 to 2607 1 to 467   fully sequenced,   467/467
(100 %)
0 diff
(100 %id)
BE878057 large cell carcinoma, undifferentiated, lung .e 2150 to 2789 1 to 640       640/642
(99 %)
1 diff
(99.9 %id)
BQ001936 lung, Metastatic Chondrosarcoma .e 2160 to 2865 724 to 19   AAA   706/706
(100 %)
0 diff
(100 %id)
TI_154019430   .e 2162 to 2865 799 to 96   AAA   704/704
(100 %)
0 diff
(100 %id)
BM688037 eye, human retina .e 2163 to 2865 10 to 710   fully sequenced, AAA   701/710
(98 %)
6 diff
(99.2 %id)
BU627451 Bone, Enchondroma cell line .e 2168 to 2864 715 to 19   AAA   697/697
(100 %)
0 diff
(100 %id)
BM989754 lung, Metastatic Chondrosarcoma .e 2178 to 2865 705 to 19   AAA   687/687
(100 %)
1 diff
(99.9 %id)
CA437966 lung, Metastatic Chondrosarcoma .e 2183 to 2865 701 to 19   AAA   683/683
(100 %)
0 diff
(100 %id)
CA748494 Alveolar Macrophage, lung .e 2184 to 2865 699 to 19   AAA   681/681
(100 %)
1 diff
(99.9 %id)
BM693055.
matches multiple genes
eye, Retina Foveal and Macular .e 2185 to 2405 1 to 221     also hits gene teerobu 221/227
(97 %)
1 diff
(99.6 %id)
BM990448 lung, Metastatic Chondrosarcoma .e 2194 to 2865 689 to 19   AAA   671/671
(100 %)
1 diff
(99.9 %id)
TI_154103616   .e 2216 to 2865 720 to 83   AAA   638/795
(80 %)
33 diff
(95.9 %id)
BM666268 eye, fetal eyes .e 2227 to 2870 662 to 19   tiling clone, fully sequenced, AAA   644/644
(100 %)
0 diff
(100 %id)
BM989450 lung, Metastatic Chondrosarcoma .e 2228 to 2865 656 to 19   AAA   638/638
(100 %)
0 diff
(100 %id)
BQ613916 insulinoma, Pancreas .e 2292 to 2866 576 to 2       575/576
(99 %)
0 diff
(100 %id)
BQ549431 insulinoma, Pancreas .e 2292 to 2869 593 to 16   AAA   578/578
(100 %)
1 diff
(99.9 %id)
BM510915 insulinoma, Pancreas .e 2294 to 2872 635 to 57       579/635
(91 %)
0 diff
(100 %id)
CK823794 insulinoma, Pancreas .e 2298 to 2866 570 to 2       569/570
(99 %)
0 diff
(100 %id)
TI_154192712   .e 2310 to 2865 53 to 611   AAA   559/559
(100 %)
2 diff
(99.7 %id)
DB301554 amygdala .e 2330 to 2865 536 to 1       536/536
(100 %)
0 diff
(100 %id)
TI_154010977   .e 2332 to 2863 668 to 134   AAA   535/1104
(48 %)
20 diff
(98.2 %id)
CB054501.
matches multiple genes
brain, glioblastoma (pooled) .e 2334 to 2865 590 to 59   AAA also hits gene teerobu 532/532
(100 %)
10 diff
(98.2 %id)
CB054526.
matches multiple genes
brain, glioblastoma (pooled) .e 2334 to 2864 579 to 49   AAA also hits gene teerobu 531/531
(100 %)
5 diff
(99.1 %id)
AW517104 cervix .e 2356 to 2864 509 to 1       509/509
(100 %)
0 diff
(100 %id)
DB522225 testis .e 2372 to 2863 1 to 492   AAA Submitted on the opposite strand 492/494
(99 %)
2 diff
(99.6 %id)
AA186569   .e 2382 to 2865 1 to 485   fully sequenced,   485/485
(100 %)
3 diff
(99.4 %id)
DB543143 hippocampus .e 2385 to 2865 1 to 481     Submitted on the opposite strand 481/481
(100 %)
2 diff
(99.6 %id)
DB575045 hypothalamus .e 2388 to 2865 1 to 478     Submitted on the opposite strand 478/478
(100 %)
1 diff
(99.8 %id)
DB577964 hypothalamus .e 2393 to 2865 1 to 475     Submitted on the opposite strand 475/475
(100 %)
3 diff
(99.4 %id)
BU948030 insulinoma, Pancreas .e 2395 to 2851 457 to 1       457/459
(99 %)
1 diff
(99.8 %id)
DB522561 testis .e 2396 to 2865 1 to 470     Submitted on the opposite strand 470/470
(100 %)
1 diff
(99.8 %id)
BM687805 eye, Retina Foveal and Macular .e 2399 to 2844 9 to 454       446/454
(98 %)
6 diff
(98.7 %id)
BM696220.
matches multiple genes
eye, human retina .e 2399 to 2808 1 to 410     also hits gene teerobu 410/410
(100 %)
1 diff
(99.8 %id)
DB575510 hypothalamus .e 2403 to 2865 1 to 462     Submitted on the opposite strand 462/462
(100 %)
2 diff
(99.6 %id)
DB523392 testis .e 2406 to 2863 1 to 458     Submitted on the opposite strand 458/460
(99 %)
5 diff
(99.0 %id)
DB567330 hypothalamus .e 2411 to 2865 1 to 456     Submitted on the opposite strand 456/457
(99 %)
3 diff
(99.4 %id)
AI422300 brain, glioblastoma (pooled) .e 2415 to 2865 451 to 1       451/451
(100 %)
0 diff
(100 %id)
BX331796.
matches multiple genes
Neuroblastoma Cot 25-normalized .e 2417 to 2866 1 to 450     also hits gene teerobu 450/450
(100 %)
1 diff
(99.8 %id)
W47512.
matches multiple genes
senescent fibroblast .e 2422 to 2866 454 to 7     also hits gene teerobu 448/454
(98 %)
0 diff
(100 %id)
W68073 heart .e 2424 to 2865 435 to 1   fully sequenced,   435/435
(100 %)
2 diff
(99.6 %id)
DB546352 hippocampus .e 2425 to 2865 1 to 441     Submitted on the opposite strand 441/441
(100 %)
2 diff
(99.6 %id)
BX456853 thymus .e 2433 to 2838 406 to 1   fully sequenced,   406/406
(100 %)
0 diff
(100 %id)
BU726893 eye, human retina .e 2463 to 2865 421 to 19   fully sequenced, AAA   403/403
(100 %)
1 diff
(99.8 %id)
AA862278 carcinoid, lung .e 2486 to 2864 379 to 1       379/379
(100 %)
0 diff
(100 %id)
DB544254 hippocampus .e 2494 to 2865 1 to 373     Submitted on the opposite strand 373/373
(100 %)
4 diff
(99.0 %id)
BF432684 brain, glioblastoma (pooled) .e 2507 to 2865 359 to 1       359/359
(100 %)
0 diff
(100 %id)
BF664265 B-cells, primary B-cells from tonsils (cell line) .e 2554 to 2865 1 to 312   AAA   312/312
(100 %)
0 diff
(100 %id)
BG759788 B-cells, primary B-cells from tonsils (cell line) .e 2554 to 2865 1 to 312   AAA   312/312
(100 %)
0 diff
(100 %id)
AW328067 Burkitt lymphoma, lymph .e 2577 to 2865 312 to 24   fully sequenced, AAA   289/289
(100 %)
0 diff
(100 %id)
AA181835   .e 2609 to 2867 260 to 1   fully sequenced,   260/260
(100 %)
2 diff
(99.3 %id)
T30346 colon, endothelial .e 2638 to 2870 1 to 233       233/233
(100 %)
0 diff
(100 %id)
AA782804 parathyroid gland, parathyroid tumor .e 2719 to 2866 154 to 7       148/154
(96 %)
0 diff
(100 %id)
BQ446273 Knee, Osteoarthritic Cartilage .e 2750 to 2865 134 to 19   AAA   116/116
(100 %)
0 diff
(100 %id)
DA659133   .f 1 to 575 2 to 576 R83* tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
AK092992 Spleen .g 1 to 2899 2 to 2899 exact tiling clone, available from FLJ,   2899/2899
(100 %)
6 diff
(99.8 %id)
AX747841   .g 1 to 2899 2 to 2899 exact     2899/2899
(100 %)
6 diff
(99.8 %id)
DA943405 Spleen .g 1 to 582 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DB333351 Spleen .g 2364 to 2899 537 to 1   tiling clone,   537/537
(100 %)
4 diff
(99.3 %id)
BP291678 lung .h 1 to 576 1 to 576   tiling clone,   576/576
(100 %)
5 diff
(99.2 %id)
AK309288 tongue, tumor tissue .h 80 to 1317 1 to 1238 exact tiling clone,   1238/1238
(100 %)
1 diff
(100.0 %id)
DA440643 tongue, tumor tissue .h 81 to 669 2 to 590 exact capped   589/589
(100 %)
1 diff
(99.9 %id)
DB127023 thymus .i 1 to 535 2 to 536   tiling clone, capped   535/538
(99 %)
1 diff
(99.9 %id)
DA257111 caudate nucleus .j 1 to 519 2 to 520   tiling clone, capped   519/519
(100 %)
0 diff
(100 %id)
DA698370   .k 1 to 515 2 to 517 exact tiling clone, capped   516/516
(100 %)
3 diff
(99.5 %id)
AK126848 amygdala .l-u 1 to 3256 2 to 3257 exact tiling clone, available from FLJ,   3257/3257
(100 %)
4 diff
(99.9 %id)
DA184876 amygdala .l-u 1 to 494 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
BF825035 head_normal .l-u 160 to 561 414 to 13     Submitted on the opposite strand 402/417
(96 %)
0 diff
(100 %id)
TI_154150031   .l-u 161 to 642 81 to 562       482/775
(62 %)
23 diff
(97.1 %id)
TI_154148846   .l-u 177 to 852 29 to 688       660/718
(91 %)
68 diff
(90.6 %id)
CV359224 colon .l-u 470 to 722 279 to 28     Submitted on the opposite strand 252/283
(89 %)
0 diff
(100 %id)
DB303093 amygdala .l-u 2732 to 3256 525 to 1       525/525
(100 %)
0 diff
(100 %id)
DA530391 brain .m 1 to 609 2 to 610 exact tiling clone, capped   609/609
(100 %)
0 diff
(100 %id)
DA409779 thalamus .n 1 to 651 2 to 656   tiling clone, capped   655/655
(100 %)
6 diff
(99.1 %id)
DA772419 brain .n 145 to 672 2 to 529 R83* tiling clone, capped   528/528
(100 %)
2 diff
(99.7 %id)
DA706178   .o 1 to 500 2 to 502 A54C V55C A56G P57S G58R ... tiling clone, capped   501/501
(100 %)
1 diff
(99.9 %id)
DA994985 synovial membrane tissue from rheumatioidarthritis .p 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DA390674 thalamus .q 1 to 581 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
BX642082   .q 335 to 514 19 to 200       182/200
(91 %)
8 diff
(96.0 %id)
DB311787 thalamus .q 1284 to 1799 516 to 1   tiling clone,   516/516
(100 %)
3 diff
(99.5 %id)
DA395856 thalamus .r 1 to 579 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
DA082058 cerebellum .r 37 to 583 2 to 548   capped   547/548
(99 %)
5 diff
(99.1 %id)
DB166918 kidney, tumor tissue .r 37 to 590 2 to 555 exact tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
BP251537 hippocampus .s 1 to 578 8 to 584   tiling clone,   584/584
(100 %)
5 diff
(99.2 %id)
BI026700 marrow .s 455 to 581 134 to 8       127/134
(94 %)
0 diff
(100 %id)
DB456794 testis .t 1 to 485 1 to 485 exact tiling clone,   485/485
(100 %)
1 diff
(99.8 %id)
DB457898 testis .t 7 to 489 1 to 483   tiling clone,   483/483
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o, .p, .q, .r, .s, .t Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C